Query 000529
Match_columns 1441
No_of_seqs 877 out of 5890
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 18:10:12 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000529.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000529hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 4E-254 9E-259 2343.3 97.6 1339 36-1441 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-237 3E-242 2360.4 144.6 1421 19-1441 19-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-187 4E-192 1885.8 136.3 1287 93-1436 2-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 4.2E-94 9.1E-99 911.0 63.4 581 840-1438 36-659 (659)
5 TIGR00955 3a01204 The Eye Pigm 100.0 7.1E-94 1.5E-98 911.2 60.3 564 867-1441 36-617 (617)
6 KOG0061 Transporter, ABC super 100.0 5.7E-94 1.2E-98 900.1 56.5 575 841-1440 23-611 (613)
7 TIGR00956 3a01205 Pleiotropic 100.0 4.6E-91 1E-95 945.2 63.7 561 867-1438 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 6.2E-90 1.3E-94 928.7 59.1 591 838-1437 126-789 (1470)
9 KOG0061 Transporter, ABC super 100.0 3E-81 6.6E-86 785.2 57.5 583 114-775 21-608 (613)
10 KOG0065 Pleiotropic drug resis 100.0 5.5E-83 1.2E-87 801.9 39.2 562 867-1438 126-731 (1391)
11 PLN03211 ABC transporter G-25; 100.0 9.9E-80 2.1E-84 779.9 63.6 609 114-775 35-658 (659)
12 TIGR00955 3a01204 The Eye Pigm 100.0 3.7E-80 8.1E-85 785.6 59.5 570 162-775 35-613 (617)
13 KOG0055 Multidrug/pheromone ex 100.0 2.3E-75 5E-80 736.3 47.2 790 159-1081 361-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 7.9E-73 1.7E-77 731.1 53.7 775 165-1082 534-1358(1381)
15 TIGR01257 rim_protein retinal- 100.0 2.1E-70 4.5E-75 737.2 72.2 804 165-1092 943-2161(2272)
16 PLN03130 ABC transporter C fam 100.0 7.7E-68 1.7E-72 725.2 56.6 211 843-1082 1237-1457(1622)
17 PLN03232 ABC transporter C fam 100.0 4.3E-67 9.3E-72 718.8 53.5 210 843-1081 1234-1453(1495)
18 COG1123 ATPase components of v 100.0 9.9E-66 2.2E-70 611.7 49.9 474 165-1081 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 2.6E-65 5.7E-70 693.9 57.5 216 843-1081 1165-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 1.6E-65 3.5E-70 704.3 52.4 210 843-1081 1284-1503(1522)
21 PRK13549 xylose transporter AT 100.0 3.2E-64 6.9E-69 629.1 47.9 458 165-1083 18-491 (506)
22 PRK10261 glutathione transport 100.0 1.1E-63 2.4E-68 635.5 53.3 488 165-1082 29-549 (623)
23 PTZ00243 ABC transporter; Prov 100.0 8E-64 1.7E-68 685.1 54.8 211 842-1081 1307-1528(1560)
24 PRK10762 D-ribose transporter 100.0 7.5E-64 1.6E-68 625.0 47.7 450 165-1083 17-481 (501)
25 PRK09700 D-allose transporter 100.0 7.3E-64 1.6E-68 626.9 46.6 458 165-1081 18-493 (510)
26 PRK15134 microcin C ABC transp 100.0 3.1E-63 6.8E-68 623.4 51.7 463 165-1081 22-510 (529)
27 TIGR01271 CFTR_protein cystic 100.0 3.7E-63 8.1E-68 678.7 56.7 210 842-1081 1216-1435(1490)
28 TIGR03269 met_CoM_red_A2 methy 100.0 5.7E-63 1.2E-67 620.3 49.6 445 165-1081 13-512 (520)
29 PRK15439 autoinducer 2 ABC tra 100.0 4.9E-63 1.1E-67 617.9 48.3 454 165-1083 24-489 (510)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-62 2.7E-67 614.7 48.4 458 165-1082 14-488 (500)
31 PRK11288 araG L-arabinose tran 100.0 1.2E-62 2.7E-67 614.0 47.7 452 165-1084 17-483 (501)
32 PRK10982 galactose/methyl gala 100.0 1.7E-61 3.6E-66 602.8 47.3 450 165-1082 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 2.5E-60 5.4E-65 592.6 42.1 447 166-1079 17-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.5E-58 3.3E-63 514.9 44.7 470 163-1081 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 3.1E-58 6.6E-63 580.1 48.7 201 843-1080 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 3E-58 6.5E-63 578.5 47.1 198 843-1081 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 6.7E-57 1.5E-61 568.0 53.5 201 843-1080 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 8.1E-56 1.8E-60 555.1 43.0 211 843-1095 340-554 (590)
39 PRK10636 putative ABC transpor 100.0 1.2E-54 2.5E-59 552.9 53.3 197 843-1081 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 3.3E-54 7.1E-59 550.5 51.2 202 843-1081 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.4E-54 3.1E-59 513.5 43.7 451 163-1081 19-485 (500)
42 PLN03073 ABC transporter F fam 100.0 2.7E-52 5.9E-57 531.6 46.9 200 843-1081 508-709 (718)
43 COG0488 Uup ATPase components 100.0 4.7E-50 1E-54 489.1 45.4 221 163-413 14-239 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.4E-50 5.3E-55 465.8 40.0 458 164-1083 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.1E-44 2.3E-49 378.3 22.1 214 844-1081 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 8.1E-44 1.8E-48 371.7 20.6 221 163-435 13-238 (240)
47 KOG0927 Predicted transporter 100.0 1.8E-41 4E-46 392.2 30.0 200 843-1081 389-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 2.2E-42 4.7E-47 378.6 20.4 219 844-1082 2-227 (339)
49 COG1135 AbcC ABC-type metal io 100.0 3.1E-42 6.8E-47 377.4 20.9 224 163-437 17-246 (339)
50 COG1127 Ttg2A ABC-type transpo 100.0 6.8E-42 1.5E-46 362.8 21.5 230 843-1096 8-249 (263)
51 TIGR01257 rim_protein retinal- 100.0 2.9E-37 6.3E-42 417.5 71.4 216 842-1081 927-1144(2272)
52 COG3839 MalK ABC-type sugar tr 100.0 4.2E-42 9.1E-47 393.2 20.5 217 167-434 18-235 (338)
53 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-41 3.6E-46 372.3 23.7 218 843-1083 4-224 (254)
54 COG1131 CcmA ABC-type multidru 100.0 2E-41 4.4E-46 391.1 24.9 222 844-1094 5-230 (293)
55 COG1120 FepC ABC-type cobalami 100.0 1.3E-41 2.8E-46 375.4 20.8 219 843-1083 2-225 (258)
56 COG1116 TauB ABC-type nitrate/ 100.0 2.2E-41 4.8E-46 365.5 21.9 204 843-1072 3-207 (248)
57 COG1125 OpuBA ABC-type proline 100.0 1.7E-41 3.8E-46 360.1 20.1 208 164-414 13-225 (309)
58 COG3842 PotA ABC-type spermidi 100.0 1.5E-41 3.3E-46 390.7 20.5 223 164-436 17-240 (352)
59 COG1125 OpuBA ABC-type proline 100.0 1.4E-41 3.1E-46 360.7 18.2 214 844-1082 2-221 (309)
60 COG3638 ABC-type phosphate/pho 100.0 3.4E-41 7.4E-46 356.5 19.0 222 843-1085 3-236 (258)
61 COG1136 SalX ABC-type antimicr 100.0 1.7E-40 3.8E-45 359.5 23.3 193 869-1074 18-219 (226)
62 COG1118 CysA ABC-type sulfate/ 100.0 6.3E-41 1.4E-45 365.9 19.4 224 163-435 13-240 (345)
63 COG1116 TauB ABC-type nitrate/ 100.0 1E-40 2.2E-45 360.4 20.4 194 165-403 16-211 (248)
64 COG1120 FepC ABC-type cobalami 100.0 1.1E-40 2.3E-45 368.1 20.6 210 164-413 14-227 (258)
65 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-40 6.4E-45 350.4 22.2 210 163-414 19-235 (263)
66 COG1131 CcmA ABC-type multidru 100.0 2.9E-40 6.3E-45 381.5 23.8 212 164-418 17-230 (293)
67 COG4555 NatA ABC-type Na+ tran 100.0 5E-41 1.1E-45 345.0 14.8 202 869-1082 15-218 (245)
68 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-40 3.3E-45 362.9 18.1 206 867-1082 13-223 (345)
69 COG2884 FtsE Predicted ATPase 100.0 2.8E-40 6E-45 337.2 18.8 214 844-1081 2-221 (223)
70 COG4555 NatA ABC-type Na+ tran 100.0 1.9E-40 4.1E-45 340.8 16.7 211 160-414 10-222 (245)
71 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-39 4.3E-44 355.9 23.2 207 166-413 18-226 (254)
72 COG3839 MalK ABC-type sugar tr 100.0 1E-39 2.2E-44 373.7 21.7 215 843-1082 3-219 (338)
73 COG1136 SalX ABC-type antimicr 100.0 1.7E-39 3.8E-44 351.7 22.2 196 164-403 17-220 (226)
74 COG3638 ABC-type phosphate/pho 100.0 1E-39 2.2E-44 345.4 19.8 217 163-414 15-237 (258)
75 COG1117 PstB ABC-type phosphat 100.0 8.4E-40 1.8E-44 339.4 18.6 217 843-1081 7-232 (253)
76 COG1117 PstB ABC-type phosphat 100.0 6.9E-40 1.5E-44 340.1 17.1 222 164-433 19-248 (253)
77 COG3842 PotA ABC-type spermidi 100.0 2.1E-39 4.7E-44 372.9 19.9 216 843-1082 5-222 (352)
78 PRK13537 nodulation ABC transp 100.0 1.6E-38 3.4E-43 370.8 26.4 214 843-1081 7-222 (306)
79 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-38 8.2E-43 370.2 27.3 206 165-413 18-229 (343)
80 TIGR03265 PhnT2 putative 2-ami 100.0 3.9E-38 8.4E-43 372.8 26.9 207 165-414 17-224 (353)
81 PRK11432 fbpC ferric transport 100.0 4.8E-38 1E-42 371.4 26.9 206 165-413 19-225 (351)
82 TIGR03258 PhnT 2-aminoethylpho 100.0 5.5E-38 1.2E-42 371.9 27.3 207 165-413 18-227 (362)
83 PRK11650 ugpC glycerol-3-phosp 100.0 3.5E-38 7.5E-43 373.6 24.9 206 165-413 17-223 (356)
84 TIGR02314 ABC_MetN D-methionin 100.0 5.5E-38 1.2E-42 368.8 26.3 217 844-1081 2-225 (343)
85 PRK09452 potA putrescine/sperm 100.0 9.9E-38 2.1E-42 370.9 27.0 218 165-433 27-245 (375)
86 cd03261 ABC_Org_Solvent_Resist 100.0 1E-37 2.2E-42 352.1 25.3 213 845-1081 2-221 (235)
87 TIGR01186 proV glycine betaine 100.0 1E-37 2.2E-42 368.4 25.6 208 164-414 5-219 (363)
88 PRK11650 ugpC glycerol-3-phosp 100.0 9.1E-38 2E-42 370.1 25.3 215 844-1082 4-220 (356)
89 COG1122 CbiO ABC-type cobalt t 100.0 4.2E-38 9.2E-43 348.4 20.6 207 165-414 17-228 (235)
90 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-37 2.4E-42 369.0 25.5 215 843-1082 4-220 (353)
91 COG3840 ThiQ ABC-type thiamine 100.0 3E-38 6.5E-43 319.1 17.6 201 170-413 17-218 (231)
92 COG2884 FtsE Predicted ATPase 100.0 5.7E-38 1.2E-42 320.3 19.2 203 161-407 11-219 (223)
93 PRK11432 fbpC ferric transport 100.0 1.4E-37 3.1E-42 367.3 25.4 215 843-1082 6-222 (351)
94 PRK13536 nodulation factor exp 100.0 2.3E-37 5E-42 364.4 27.1 215 842-1081 40-256 (340)
95 COG3840 ThiQ ABC-type thiamine 100.0 4.7E-38 1E-42 317.7 17.6 196 874-1081 17-214 (231)
96 PRK13537 nodulation ABC transp 100.0 3.1E-37 6.6E-42 359.9 27.2 206 165-414 20-227 (306)
97 TIGR03258 PhnT 2-aminoethylpho 100.0 2E-37 4.4E-42 367.1 25.7 215 843-1082 5-224 (362)
98 COG1122 CbiO ABC-type cobalt t 100.0 1.2E-37 2.7E-42 344.7 21.6 214 844-1081 4-223 (235)
99 PRK10851 sulfate/thiosulfate t 100.0 3.7E-37 8E-42 364.5 27.1 210 165-413 15-225 (353)
100 cd03259 ABC_Carb_Solutes_like 100.0 3E-37 6.4E-42 343.2 24.3 210 845-1079 2-213 (213)
101 COG1124 DppF ABC-type dipeptid 100.0 1.4E-37 3.1E-42 332.2 20.4 217 843-1082 3-227 (252)
102 COG0411 LivG ABC-type branched 100.0 7.5E-38 1.6E-42 334.8 18.1 221 163-414 15-239 (250)
103 TIGR01188 drrA daunorubicin re 100.0 2.1E-37 4.6E-42 361.7 23.5 202 868-1081 5-208 (302)
104 COG1124 DppF ABC-type dipeptid 100.0 2.5E-37 5.4E-42 330.3 21.4 205 165-414 20-231 (252)
105 PRK10851 sulfate/thiosulfate t 100.0 4.5E-37 9.8E-42 363.8 25.8 217 844-1082 3-222 (353)
106 TIGR00960 3a0501s02 Type II (G 100.0 3.9E-37 8.6E-42 342.9 23.4 208 844-1074 2-215 (216)
107 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.3E-37 1.8E-41 341.2 25.9 200 869-1081 17-218 (220)
108 PRK09452 potA putrescine/sperm 100.0 6.7E-37 1.4E-41 363.9 26.0 214 843-1081 14-229 (375)
109 PRK11607 potG putrescine trans 100.0 5.3E-37 1.2E-41 365.4 25.1 206 165-413 32-238 (377)
110 COG0410 LivF ABC-type branched 100.0 3.6E-37 7.9E-42 327.1 20.9 207 164-414 15-226 (237)
111 cd03265 ABC_DrrA DrrA is the A 100.0 8.2E-37 1.8E-41 341.3 24.9 212 845-1081 2-216 (220)
112 cd03269 ABC_putative_ATPase Th 100.0 7.5E-37 1.6E-41 339.2 24.4 209 845-1079 2-210 (210)
113 cd03301 ABC_MalK_N The N-termi 100.0 8.7E-37 1.9E-41 339.5 24.9 210 845-1079 2-213 (213)
114 COG1137 YhbG ABC-type (unclass 100.0 5.2E-38 1.1E-42 322.5 13.7 207 866-1082 14-224 (243)
115 TIGR01288 nodI ATP-binding ABC 100.0 8.9E-37 1.9E-41 356.6 25.9 214 843-1081 4-219 (303)
116 cd03261 ABC_Org_Solvent_Resist 100.0 8.7E-37 1.9E-41 344.6 24.6 207 165-413 13-225 (235)
117 PRK11153 metN DL-methionine tr 100.0 1.5E-36 3.1E-41 359.5 27.5 206 165-413 18-229 (343)
118 TIGR01186 proV glycine betaine 100.0 7.5E-37 1.6E-41 360.9 24.7 204 867-1082 4-215 (363)
119 TIGR01188 drrA daunorubicin re 100.0 7.4E-37 1.6E-41 357.1 24.2 206 165-414 6-213 (302)
120 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-36 2.9E-41 343.4 25.3 215 845-1081 2-227 (236)
121 PRK11153 metN DL-methionine tr 100.0 1.2E-36 2.6E-41 360.3 25.9 217 844-1081 2-225 (343)
122 PRK11000 maltose/maltodextrin 100.0 9.4E-37 2E-41 363.9 25.1 206 165-413 16-222 (369)
123 PRK11607 potG putrescine trans 100.0 1.9E-36 4.1E-41 360.7 27.5 215 843-1082 19-235 (377)
124 cd03296 ABC_CysA_sulfate_impor 100.0 1.9E-36 4.2E-41 342.6 26.0 217 843-1081 2-221 (239)
125 KOG0058 Peptide exporter, ABC 100.0 2.2E-37 4.9E-42 373.1 19.4 210 163-414 479-691 (716)
126 PRK11000 maltose/maltodextrin 100.0 1.3E-36 2.9E-41 362.6 26.0 215 843-1082 3-219 (369)
127 cd03218 ABC_YhbG The ABC trans 100.0 1.7E-36 3.6E-41 341.8 24.9 212 845-1081 2-217 (232)
128 TIGR03522 GldA_ABC_ATP gliding 100.0 1.7E-36 3.6E-41 353.8 25.5 212 844-1081 3-216 (301)
129 cd03266 ABC_NatA_sodium_export 100.0 1.3E-36 2.9E-41 339.2 23.6 215 844-1079 2-218 (218)
130 COG2274 SunT ABC-type bacterio 100.0 2.2E-35 4.8E-40 371.6 37.3 214 840-1081 468-691 (709)
131 PRK09536 btuD corrinoid ABC tr 100.0 1.3E-36 2.8E-41 363.1 24.8 218 843-1082 3-224 (402)
132 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-36 3.4E-41 336.1 23.2 206 845-1079 2-208 (208)
133 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-36 3.6E-41 338.5 23.1 208 845-1074 2-217 (218)
134 cd03260 ABC_PstB_phosphate_tra 100.0 1.8E-36 3.8E-41 340.4 23.5 213 845-1081 2-224 (227)
135 cd03234 ABCG_White The White s 100.0 3.4E-36 7.5E-41 337.6 25.6 221 844-1079 4-226 (226)
136 COG0411 LivG ABC-type branched 100.0 5E-37 1.1E-41 328.5 17.7 208 866-1082 14-235 (250)
137 KOG0058 Peptide exporter, ABC 100.0 6.6E-36 1.4E-40 360.4 29.0 216 841-1081 463-686 (716)
138 PRK13536 nodulation factor exp 100.0 3.1E-36 6.7E-41 354.9 25.2 206 165-414 54-261 (340)
139 cd03256 ABC_PhnC_transporter A 100.0 2.4E-36 5.3E-41 342.5 23.4 204 869-1081 14-229 (241)
140 PRK13637 cbiO cobalt transport 100.0 3.7E-36 8E-41 348.5 25.1 218 165-425 20-248 (287)
141 cd03226 ABC_cobalt_CbiO_domain 100.0 1.7E-36 3.8E-41 334.9 21.3 192 869-1076 13-205 (205)
142 cd03258 ABC_MetN_methionine_tr 100.0 3.3E-36 7.2E-41 339.5 24.0 217 844-1081 2-225 (233)
143 PRK13637 cbiO cobalt transport 100.0 3.8E-36 8.2E-41 348.4 25.0 218 844-1081 3-229 (287)
144 PRK09493 glnQ glutamine ABC tr 100.0 4.9E-36 1.1E-40 339.6 25.4 214 844-1081 2-220 (240)
145 cd03259 ABC_Carb_Solutes_like 100.0 2.8E-36 6.1E-41 335.3 23.0 200 165-407 13-213 (213)
146 cd03258 ABC_MetN_methionine_tr 100.0 6.2E-36 1.3E-40 337.3 25.9 205 166-413 19-229 (233)
147 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.1E-36 6.7E-41 346.3 23.8 204 866-1081 34-245 (269)
148 cd03263 ABC_subfamily_A The AB 100.0 3.6E-36 7.7E-41 336.3 23.6 213 845-1081 2-216 (220)
149 PRK11629 lolD lipoprotein tran 100.0 7.6E-36 1.6E-40 336.4 26.4 217 843-1081 5-229 (233)
150 COG4559 ABC-type hemin transpo 100.0 1.8E-36 3.8E-41 313.9 19.3 217 844-1083 2-227 (259)
151 COG1137 YhbG ABC-type (unclass 100.0 2.6E-37 5.7E-42 317.4 13.0 210 163-414 15-228 (243)
152 cd03296 ABC_CysA_sulfate_impor 100.0 7.9E-36 1.7E-40 337.6 26.5 210 165-413 15-225 (239)
153 cd03265 ABC_DrrA DrrA is the A 100.0 4.2E-36 9E-41 335.6 23.9 205 165-412 13-219 (220)
154 PRK13643 cbiO cobalt transport 100.0 8.6E-36 1.9E-40 345.6 27.2 225 165-433 19-255 (288)
155 TIGR01288 nodI ATP-binding ABC 100.0 7.3E-36 1.6E-40 348.9 26.8 206 165-414 17-224 (303)
156 TIGR02673 FtsE cell division A 100.0 4E-36 8.7E-41 334.4 23.4 205 844-1071 2-212 (214)
157 COG4559 ABC-type hemin transpo 100.0 1.8E-36 3.9E-41 313.8 18.9 207 165-413 14-229 (259)
158 PRK11264 putative amino-acid A 100.0 6.2E-36 1.3E-40 341.0 25.4 214 844-1081 4-228 (250)
159 COG4152 ABC-type uncharacteriz 100.0 1.4E-36 2.9E-41 320.8 18.0 204 866-1082 12-215 (300)
160 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.4E-36 1.8E-40 333.1 25.6 200 165-409 17-218 (220)
161 COG0410 LivF ABC-type branched 100.0 2.6E-36 5.6E-41 320.6 20.1 203 867-1082 14-222 (237)
162 PRK11248 tauB taurine transpor 100.0 8.4E-36 1.8E-40 339.8 25.9 212 844-1081 2-215 (255)
163 cd03292 ABC_FtsE_transporter F 100.0 4.9E-36 1.1E-40 333.7 23.4 206 845-1074 2-213 (214)
164 cd03295 ABC_OpuCA_Osmoprotecti 100.0 6.1E-36 1.3E-40 339.2 24.5 201 869-1081 14-220 (242)
165 cd03224 ABC_TM1139_LivF_branch 100.0 4.4E-36 9.5E-41 336.1 23.0 199 869-1081 13-216 (222)
166 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.7E-36 1.7E-40 343.0 25.2 208 163-413 35-249 (269)
167 PRK11831 putative ABC transpor 100.0 9.5E-36 2.1E-40 342.4 25.9 215 843-1081 7-228 (269)
168 COG4175 ProV ABC-type proline/ 100.0 1.6E-36 3.4E-41 331.0 18.1 222 164-436 40-268 (386)
169 PRK13647 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 343.9 24.6 215 843-1081 4-222 (274)
170 TIGR02315 ABC_phnC phosphonate 100.0 3.4E-36 7.3E-41 341.7 21.6 218 844-1082 2-231 (243)
171 cd03219 ABC_Mj1267_LivG_branch 100.0 7.7E-36 1.7E-40 337.3 24.0 215 165-413 13-231 (236)
172 PRK13650 cbiO cobalt transport 100.0 1.5E-35 3.3E-40 342.2 26.8 205 165-413 20-228 (279)
173 PRK13634 cbiO cobalt transport 100.0 6.7E-36 1.4E-40 346.8 23.9 218 165-425 20-249 (290)
174 PRK13634 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 346.5 24.2 218 844-1081 3-230 (290)
175 PRK13651 cobalt transporter AT 100.0 7.4E-36 1.6E-40 347.5 24.2 218 844-1081 3-249 (305)
176 cd03264 ABC_drug_resistance_li 100.0 7.9E-36 1.7E-40 331.2 23.2 208 845-1079 2-211 (211)
177 PRK10908 cell division protein 100.0 1.3E-35 2.9E-40 332.0 24.6 208 844-1075 2-215 (222)
178 KOG0055 Multidrug/pheromone ex 100.0 1.3E-35 2.9E-40 376.5 27.5 216 840-1082 347-572 (1228)
179 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-35 2.4E-40 330.7 23.5 200 165-407 13-213 (213)
180 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-35 2.5E-40 334.1 24.0 217 844-1079 2-228 (228)
181 COG2274 SunT ABC-type bacterio 100.0 4E-36 8.8E-41 378.3 22.6 207 166-414 487-696 (709)
182 PRK10070 glycine betaine trans 100.0 1.1E-35 2.5E-40 354.7 25.2 207 164-413 40-253 (400)
183 PRK13643 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 344.3 24.7 218 844-1082 2-229 (288)
184 cd03218 ABC_YhbG The ABC trans 100.0 1.3E-35 2.8E-40 334.6 24.2 205 165-413 13-221 (232)
185 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.8E-35 4E-40 334.0 25.5 212 844-1081 2-216 (236)
186 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.6E-36 2.1E-40 332.3 22.9 195 165-403 17-218 (218)
187 cd03262 ABC_HisP_GlnQ_permease 100.0 9.4E-36 2E-40 331.2 22.7 206 845-1074 2-212 (213)
188 PRK11629 lolD lipoprotein tran 100.0 2.7E-35 5.8E-40 332.0 26.5 201 165-409 22-229 (233)
189 PRK13631 cbiO cobalt transport 100.0 1.2E-35 2.7E-40 347.6 24.6 218 843-1081 21-260 (320)
190 PRK13651 cobalt transporter AT 100.0 1.4E-35 3E-40 345.2 24.9 205 165-413 20-253 (305)
191 TIGR00972 3a0107s01c2 phosphat 100.0 2E-35 4.3E-40 336.0 25.4 214 844-1081 2-227 (247)
192 PRK10895 lipopolysaccharide AB 100.0 1.4E-35 2.9E-40 336.2 23.9 214 844-1081 4-221 (241)
193 TIGR03522 GldA_ABC_ATP gliding 100.0 1.5E-35 3.3E-40 345.7 25.0 205 165-414 15-221 (301)
194 cd03235 ABC_Metallic_Cations A 100.0 7.7E-36 1.7E-40 331.8 21.4 199 869-1079 12-213 (213)
195 PRK13636 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 342.7 24.9 216 843-1082 5-227 (283)
196 PRK10619 histidine/lysine/argi 100.0 2.3E-35 5E-40 337.4 25.8 215 843-1081 5-236 (257)
197 PRK13650 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 343.0 23.5 216 843-1081 4-224 (279)
198 PRK15079 oligopeptide ABC tran 100.0 2.4E-35 5.2E-40 346.4 26.4 230 843-1082 8-247 (331)
199 PRK13646 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 343.5 24.3 218 843-1081 2-230 (286)
200 PRK11831 putative ABC transpor 100.0 3.4E-35 7.4E-40 337.8 26.9 207 165-413 20-232 (269)
201 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-35 4.3E-40 330.5 24.3 211 844-1076 2-220 (221)
202 TIGR03415 ABC_choXWV_ATP choli 100.0 1.6E-35 3.4E-40 351.0 24.8 208 163-413 35-253 (382)
203 cd03263 ABC_subfamily_A The AB 100.0 1.3E-35 2.8E-40 331.7 22.7 203 165-412 15-219 (220)
204 TIGR00960 3a0501s02 Type II (G 100.0 8.7E-36 1.9E-40 332.1 21.2 195 165-403 16-216 (216)
205 PRK11247 ssuB aliphatic sulfon 100.0 1.6E-35 3.6E-40 336.8 23.8 206 843-1081 12-218 (257)
206 COG4988 CydD ABC-type transpor 100.0 9.1E-35 2E-39 345.1 30.8 214 840-1082 317-539 (559)
207 TIGR03740 galliderm_ABC gallid 100.0 3.3E-35 7.2E-40 329.0 25.7 197 869-1082 13-209 (223)
208 cd03266 ABC_NatA_sodium_export 100.0 2.1E-35 4.6E-40 329.6 24.0 198 166-407 19-218 (218)
209 PRK13647 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 340.9 23.8 203 166-412 19-225 (274)
210 cd03225 ABC_cobalt_CbiO_domain 100.0 1.2E-35 2.6E-40 329.8 21.8 192 869-1071 14-209 (211)
211 PRK11614 livF leucine/isoleuci 100.0 1.9E-35 4.1E-40 334.1 23.4 213 843-1082 5-222 (237)
212 PRK13646 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 340.6 26.0 206 165-413 20-234 (286)
213 PRK09536 btuD corrinoid ABC tr 100.0 2.8E-35 6E-40 351.7 26.0 209 165-413 16-227 (402)
214 cd03224 ABC_TM1139_LivF_branch 100.0 2E-35 4.3E-40 330.8 23.3 203 165-413 13-220 (222)
215 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.5E-35 5.5E-40 334.1 24.2 206 165-413 14-224 (242)
216 PRK13641 cbiO cobalt transport 100.0 2.4E-35 5.3E-40 341.9 24.6 219 843-1081 2-229 (287)
217 PRK11300 livG leucine/isoleuci 100.0 2.7E-35 6E-40 336.7 24.7 218 843-1082 5-239 (255)
218 cd03256 ABC_PhnC_transporter A 100.0 2.2E-35 4.7E-40 334.7 23.6 214 165-413 14-233 (241)
219 TIGR01978 sufC FeS assembly AT 100.0 3.6E-35 7.8E-40 333.3 25.4 218 845-1081 2-229 (243)
220 cd03269 ABC_putative_ATPase Th 100.0 1.7E-35 3.7E-40 328.3 21.9 198 165-407 13-210 (210)
221 PRK13644 cbiO cobalt transport 100.0 2.3E-35 4.9E-40 339.8 23.7 213 844-1081 2-219 (274)
222 COG4525 TauB ABC-type taurine 100.0 1.4E-35 3E-40 302.6 19.2 200 869-1081 18-219 (259)
223 PRK14268 phosphate ABC transpo 100.0 4.5E-35 9.8E-40 335.1 25.7 214 843-1081 12-237 (258)
224 PRK09493 glnQ glutamine ABC tr 100.0 5.7E-35 1.2E-39 330.9 26.3 205 165-413 14-224 (240)
225 TIGR03005 ectoine_ehuA ectoine 100.0 4.1E-35 8.8E-40 334.5 25.2 214 844-1081 1-231 (252)
226 cd03260 ABC_PstB_phosphate_tra 100.0 1.6E-35 3.6E-40 332.5 21.6 204 165-411 13-226 (227)
227 PRK11124 artP arginine transpo 100.0 3.8E-35 8.3E-40 332.7 24.8 214 843-1081 2-225 (242)
228 PRK14247 phosphate ABC transpo 100.0 5E-35 1.1E-39 333.4 25.7 216 844-1081 4-229 (250)
229 PRK15079 oligopeptide ABC tran 100.0 3.4E-35 7.3E-40 345.2 24.9 209 164-413 33-250 (331)
230 PRK13631 cbiO cobalt transport 100.0 2.9E-35 6.4E-40 344.5 24.3 217 165-425 39-279 (320)
231 PRK14267 phosphate ABC transpo 100.0 4.8E-35 1E-39 334.2 25.4 217 843-1081 4-232 (253)
232 COG4988 CydD ABC-type transpor 100.0 1.4E-35 3E-40 352.0 21.5 200 166-414 335-543 (559)
233 PRK13548 hmuV hemin importer A 100.0 4.2E-35 9.1E-40 335.0 24.6 214 844-1082 3-226 (258)
234 TIGR03411 urea_trans_UrtD urea 100.0 4.7E-35 1E-39 332.1 24.8 215 844-1081 3-226 (242)
235 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.3E-35 7.2E-40 326.2 23.0 194 874-1079 16-211 (211)
236 PRK11264 putative amino-acid A 100.0 7.1E-35 1.5E-39 332.2 26.3 205 165-413 16-232 (250)
237 PRK13652 cbiO cobalt transport 100.0 4.6E-35 1E-39 338.0 25.0 214 844-1081 4-222 (277)
238 PRK14273 phosphate ABC transpo 100.0 5.7E-35 1.2E-39 333.7 25.5 215 843-1081 7-233 (254)
239 COG4525 TauB ABC-type taurine 100.0 2.5E-35 5.4E-40 300.7 19.7 205 165-414 18-224 (259)
240 TIGR02315 ABC_phnC phosphonate 100.0 2.5E-35 5.4E-40 334.6 22.0 213 165-412 15-233 (243)
241 PRK13635 cbiO cobalt transport 100.0 3.8E-35 8.2E-40 338.7 23.6 215 843-1081 5-224 (279)
242 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6.6E-35 1.4E-39 329.5 24.9 206 165-414 14-221 (236)
243 PRK13638 cbiO cobalt transport 100.0 4.8E-35 1E-39 337.1 24.2 213 844-1081 2-220 (271)
244 PRK10070 glycine betaine trans 100.0 4E-35 8.7E-40 350.1 24.0 203 867-1081 39-249 (400)
245 PRK11308 dppF dipeptide transp 100.0 1E-34 2.2E-39 340.9 26.9 208 165-414 28-244 (327)
246 PRK14241 phosphate transporter 100.0 9.3E-35 2E-39 332.6 25.9 217 843-1081 4-237 (258)
247 cd03234 ABCG_White The White s 100.0 6.6E-35 1.4E-39 327.2 24.1 203 164-407 19-226 (226)
248 PRK11231 fecE iron-dicitrate t 100.0 5.3E-35 1.1E-39 334.0 23.7 217 844-1082 3-223 (255)
249 cd03268 ABC_BcrA_bacitracin_re 100.0 3.6E-35 7.8E-40 325.2 21.5 195 165-407 13-208 (208)
250 cd03233 ABC_PDR_domain1 The pl 100.0 7.8E-35 1.7E-39 320.4 24.0 196 843-1079 3-202 (202)
251 PRK09984 phosphonate/organopho 100.0 6.1E-35 1.3E-39 334.9 24.1 220 843-1082 4-238 (262)
252 PRK09473 oppD oligopeptide tra 100.0 1.2E-34 2.5E-39 340.9 26.9 213 165-413 29-250 (330)
253 PRK11248 tauB taurine transpor 100.0 1.1E-34 2.3E-39 330.7 25.8 201 165-410 14-216 (255)
254 TIGR02211 LolD_lipo_ex lipopro 100.0 9.1E-35 2E-39 325.2 24.7 196 165-404 18-220 (221)
255 TIGR03415 ABC_choXWV_ATP choli 100.0 5.6E-35 1.2E-39 346.3 24.1 204 867-1082 35-250 (382)
256 PRK11022 dppD dipeptide transp 100.0 1.1E-34 2.4E-39 340.9 26.3 210 165-413 20-242 (326)
257 TIGR02769 nickel_nikE nickel i 100.0 9.9E-35 2.1E-39 333.4 25.4 223 844-1081 3-235 (265)
258 PRK10575 iron-hydroxamate tran 100.0 6.4E-35 1.4E-39 335.0 23.8 218 843-1082 11-233 (265)
259 TIGR03410 urea_trans_UrtE urea 100.0 6.3E-35 1.4E-39 328.4 23.2 210 845-1082 2-217 (230)
260 PRK10253 iron-enterobactin tra 100.0 6.4E-35 1.4E-39 335.0 23.7 218 843-1082 7-229 (265)
261 PRK13649 cbiO cobalt transport 100.0 9.3E-35 2E-39 336.5 25.0 218 843-1081 2-229 (280)
262 cd03226 ABC_cobalt_CbiO_domain 100.0 3.7E-35 8E-40 324.3 20.6 192 165-404 13-205 (205)
263 cd03232 ABC_PDR_domain2 The pl 100.0 8.5E-35 1.8E-39 317.7 23.2 190 843-1079 3-192 (192)
264 PRK13639 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 334.5 25.4 214 844-1081 2-221 (275)
265 PRK10584 putative ABC transpor 100.0 1.3E-34 2.9E-39 325.3 25.4 213 843-1077 6-226 (228)
266 PRK13635 cbiO cobalt transport 100.0 7.9E-35 1.7E-39 336.0 24.1 216 165-424 20-242 (279)
267 PRK10744 pstB phosphate transp 100.0 1.2E-34 2.6E-39 331.9 25.3 217 841-1081 11-239 (260)
268 KOG0057 Mitochondrial Fe/S clu 100.0 3E-35 6.5E-40 342.6 20.4 229 110-414 343-574 (591)
269 PRK14242 phosphate transporter 100.0 1.4E-34 3.1E-39 330.2 25.7 219 843-1081 6-232 (253)
270 PRK09473 oppD oligopeptide tra 100.0 1.4E-34 3E-39 340.2 26.2 225 843-1082 12-247 (330)
271 PRK11022 dppD dipeptide transp 100.0 1.7E-34 3.7E-39 339.2 26.9 221 844-1082 4-239 (326)
272 cd03257 ABC_NikE_OppD_transpor 100.0 1.5E-34 3.2E-39 325.1 25.3 201 166-407 19-228 (228)
273 PRK11614 livF leucine/isoleuci 100.0 1.1E-34 2.5E-39 327.8 24.5 203 165-413 18-225 (237)
274 cd03300 ABC_PotA_N PotA is an 100.0 1.5E-34 3.2E-39 325.7 25.2 212 845-1081 2-215 (232)
275 PRK13636 cbiO cobalt transport 100.0 6.8E-35 1.5E-39 337.4 23.0 207 165-414 19-231 (283)
276 TIGR03873 F420-0_ABC_ATP propo 100.0 8.6E-35 1.9E-39 332.5 23.6 217 844-1082 2-222 (256)
277 TIGR01184 ntrCD nitrate transp 100.0 6.4E-35 1.4E-39 327.9 22.1 198 872-1081 1-199 (230)
278 PRK13549 xylose transporter AT 100.0 8.3E-35 1.8E-39 364.2 25.6 222 843-1084 5-230 (506)
279 PRK14245 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 329.4 25.5 215 843-1081 3-229 (250)
280 cd03264 ABC_drug_resistance_li 100.0 5.5E-35 1.2E-39 324.5 21.3 197 165-407 13-211 (211)
281 COG4175 ProV ABC-type proline/ 100.0 1.9E-35 4E-40 322.7 17.0 203 869-1083 41-251 (386)
282 PRK11247 ssuB aliphatic sulfon 100.0 1E-34 2.2E-39 330.3 23.9 194 166-410 26-219 (257)
283 PRK11308 dppF dipeptide transp 100.0 1.7E-34 3.7E-39 339.0 26.4 226 843-1082 5-240 (327)
284 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-34 2.6E-39 318.9 23.5 180 163-407 18-202 (202)
285 PRK14237 phosphate transporter 100.0 2.3E-34 5E-39 330.6 26.6 224 838-1081 15-246 (267)
286 PRK13632 cbiO cobalt transport 100.0 1.5E-34 3.1E-39 333.0 24.9 205 165-413 22-230 (271)
287 cd03292 ABC_FtsE_transporter F 100.0 5.9E-35 1.3E-39 325.1 20.9 195 165-403 14-214 (214)
288 PRK13632 cbiO cobalt transport 100.0 1.3E-34 2.9E-39 333.3 24.5 215 843-1081 7-226 (271)
289 cd03267 ABC_NatA_like Similar 100.0 1.3E-34 2.9E-39 326.6 24.0 201 867-1079 32-236 (236)
290 PRK13644 cbiO cobalt transport 100.0 1.4E-34 2.9E-39 333.4 24.4 204 165-413 15-223 (274)
291 cd03267 ABC_NatA_like Similar 100.0 1.7E-34 3.7E-39 325.7 24.7 202 163-407 32-236 (236)
292 PRK14235 phosphate transporter 100.0 2E-34 4.4E-39 331.1 25.7 216 843-1081 19-246 (267)
293 TIGR00972 3a0107s01c2 phosphat 100.0 2.7E-34 5.8E-39 326.8 26.4 206 166-413 15-231 (247)
294 PRK13641 cbiO cobalt transport 100.0 9.9E-35 2.1E-39 336.8 23.3 205 165-413 20-233 (287)
295 TIGR03005 ectoine_ehuA ectoine 100.0 2E-34 4.3E-39 328.8 25.3 206 165-413 13-235 (252)
296 TIGR00968 3a0106s01 sulfate AB 100.0 2E-34 4.3E-39 325.5 25.0 212 845-1081 2-215 (237)
297 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-34 3.3E-39 321.3 23.7 198 871-1080 13-212 (213)
298 PRK00635 excinuclease ABC subu 100.0 3.8E-33 8.3E-38 372.1 41.3 135 940-1082 759-902 (1809)
299 PRK10895 lipopolysaccharide AB 100.0 1.3E-34 2.8E-39 328.2 23.4 206 165-413 16-225 (241)
300 KOG0057 Mitochondrial Fe/S clu 100.0 2.5E-35 5.4E-40 343.3 17.9 211 841-1081 349-569 (591)
301 COG0444 DppD ABC-type dipeptid 100.0 1.5E-34 3.3E-39 322.9 23.3 212 164-413 17-242 (316)
302 PRK14256 phosphate ABC transpo 100.0 3.9E-34 8.6E-39 326.4 27.4 220 843-1081 4-231 (252)
303 PRK14269 phosphate ABC transpo 100.0 1.9E-34 4.2E-39 327.6 24.6 215 844-1081 3-225 (246)
304 PRK13652 cbiO cobalt transport 100.0 1.1E-34 2.5E-39 334.7 23.0 205 166-413 18-226 (277)
305 PRK13648 cbiO cobalt transport 100.0 2E-34 4.4E-39 331.6 24.9 216 843-1082 7-227 (269)
306 PRK13547 hmuV hemin importer A 100.0 1.5E-34 3.2E-39 331.8 23.6 219 844-1082 2-240 (272)
307 PRK11144 modC molybdate transp 100.0 1.1E-34 2.3E-39 344.9 23.1 195 170-413 16-217 (352)
308 TIGR02673 FtsE cell division A 100.0 1.2E-34 2.5E-39 322.6 22.0 194 165-402 15-214 (214)
309 COG4181 Predicted ABC-type tra 100.0 7.4E-35 1.6E-39 291.3 18.1 198 867-1077 21-226 (228)
310 PRK13640 cbiO cobalt transport 100.0 1.7E-34 3.6E-39 334.0 23.8 217 843-1081 5-227 (282)
311 PRK14250 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 327.6 22.7 209 843-1081 3-216 (241)
312 PRK10584 putative ABC transpor 100.0 3.5E-34 7.6E-39 321.9 25.7 198 165-406 23-227 (228)
313 PRK13645 cbiO cobalt transport 100.0 1.9E-34 4E-39 335.2 24.1 219 843-1081 6-235 (289)
314 PRK13633 cobalt transporter AT 100.0 1.7E-34 3.8E-39 333.7 23.8 219 843-1081 4-228 (280)
315 PRK15093 antimicrobial peptide 100.0 3E-34 6.6E-39 338.3 26.2 222 844-1081 4-243 (330)
316 TIGR02142 modC_ABC molybdenum 100.0 1.9E-34 4.1E-39 343.3 24.5 199 170-413 15-220 (354)
317 TIGR03608 L_ocin_972_ABC putat 100.0 1.7E-34 3.6E-39 319.5 22.4 189 869-1069 11-206 (206)
318 PRK14259 phosphate ABC transpo 100.0 2.3E-34 5E-39 330.8 24.2 214 843-1081 13-248 (269)
319 TIGR03410 urea_trans_UrtE urea 100.0 1.8E-34 4E-39 324.7 22.9 202 165-412 13-219 (230)
320 PRK10619 histidine/lysine/argi 100.0 3.9E-34 8.5E-39 327.2 26.0 205 165-413 18-240 (257)
321 COG0444 DppD ABC-type dipeptid 100.0 3.1E-34 6.6E-39 320.5 24.3 225 844-1082 2-239 (316)
322 cd03299 ABC_ModC_like Archeal 100.0 3.3E-34 7.1E-39 323.3 25.0 199 871-1081 14-214 (235)
323 PRK11124 artP arginine transpo 100.0 2.9E-34 6.2E-39 325.6 24.5 203 166-412 16-228 (242)
324 PRK10771 thiQ thiamine transpo 100.0 2.2E-34 4.8E-39 324.3 23.3 211 844-1081 2-214 (232)
325 TIGR01184 ntrCD nitrate transp 100.0 1.6E-34 3.4E-39 324.7 22.1 201 168-411 1-201 (230)
326 PRK13633 cobalt transporter AT 100.0 2.2E-34 4.7E-39 332.9 23.8 205 165-413 23-232 (280)
327 TIGR02770 nickel_nikD nickel i 100.0 2.1E-34 4.6E-39 323.9 23.1 204 167-413 1-214 (230)
328 PRK11174 cysteine/glutathione 100.0 1.8E-34 3.9E-39 368.7 25.2 207 165-414 363-572 (588)
329 TIGR03411 urea_trans_UrtD urea 100.0 3E-34 6.5E-39 325.5 24.2 212 165-413 15-230 (242)
330 PRK13639 cbiO cobalt transport 100.0 2.9E-34 6.4E-39 331.0 24.5 205 165-413 15-225 (275)
331 PRK14273 phosphate ABC transpo 100.0 5E-34 1.1E-38 325.9 26.2 206 166-413 21-237 (254)
332 TIGR02769 nickel_nikE nickel i 100.0 2.9E-34 6.4E-39 329.5 24.3 208 164-413 23-239 (265)
333 PRK13548 hmuV hemin importer A 100.0 2.7E-34 5.8E-39 328.4 23.8 206 165-413 15-229 (258)
334 PRK14250 phosphate ABC transpo 100.0 3.9E-34 8.4E-39 324.0 24.9 200 166-413 17-220 (241)
335 TIGR02142 modC_ABC molybdenum 100.0 2.6E-34 5.7E-39 342.0 24.5 194 874-1081 15-216 (354)
336 PRK00349 uvrA excinuclease ABC 100.0 4.5E-33 9.7E-38 359.4 37.8 122 944-1081 792-922 (943)
337 PRK14239 phosphate transporter 100.0 4.4E-34 9.5E-39 326.2 25.3 215 843-1081 5-231 (252)
338 PRK10908 cell division protein 100.0 2.4E-34 5.3E-39 321.8 22.7 196 165-404 15-216 (222)
339 PRK14270 phosphate ABC transpo 100.0 4.4E-34 9.5E-39 325.8 25.2 215 843-1081 4-230 (251)
340 PRK14240 phosphate transporter 100.0 4.9E-34 1.1E-38 325.3 25.6 215 843-1081 3-229 (250)
341 PRK11300 livG leucine/isoleuci 100.0 3.1E-34 6.7E-39 328.0 24.0 221 165-413 18-242 (255)
342 PRK11144 modC molybdate transp 100.0 2.8E-34 6.1E-39 341.2 24.5 191 874-1082 16-214 (352)
343 cd03297 ABC_ModC_molybdenum_tr 100.0 3.2E-34 6.9E-39 319.0 23.4 191 874-1079 16-214 (214)
344 PRK14274 phosphate ABC transpo 100.0 4.5E-34 9.7E-39 327.1 25.2 215 843-1081 12-238 (259)
345 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.8E-33 1.7E-37 359.0 40.0 208 843-1081 451-668 (686)
346 PRK15093 antimicrobial peptide 100.0 5E-34 1.1E-38 336.5 26.2 215 164-413 19-247 (330)
347 cd03213 ABCG_EPDR ABCG transpo 100.0 3.8E-34 8.3E-39 312.9 23.4 190 843-1079 3-194 (194)
348 PRK14244 phosphate ABC transpo 100.0 4.5E-34 9.9E-39 325.7 25.0 219 844-1081 6-232 (251)
349 PRK15112 antimicrobial peptide 100.0 3.5E-34 7.6E-39 329.1 24.1 223 844-1081 5-234 (267)
350 PRK13648 cbiO cobalt transport 100.0 4E-34 8.7E-39 329.1 24.6 204 166-413 23-230 (269)
351 PRK10762 D-ribose transporter 100.0 3E-34 6.6E-39 358.7 25.3 218 844-1083 5-227 (501)
352 PRK10575 iron-hydroxamate tran 100.0 4.1E-34 9E-39 328.3 24.3 210 165-413 24-236 (265)
353 PRK14260 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 326.2 25.3 216 843-1081 7-238 (259)
354 PRK14268 phosphate ABC transpo 100.0 4.4E-34 9.6E-39 326.9 24.4 206 165-413 25-241 (258)
355 PRK13649 cbiO cobalt transport 100.0 5.7E-34 1.2E-38 329.9 25.5 205 165-413 20-233 (280)
356 cd03225 ABC_cobalt_CbiO_domain 100.0 2.7E-34 5.8E-39 319.0 21.7 194 165-402 14-211 (211)
357 PRK13640 cbiO cobalt transport 100.0 4.5E-34 9.7E-39 330.5 24.4 208 165-413 20-231 (282)
358 PRK13638 cbiO cobalt transport 100.0 5.1E-34 1.1E-38 328.6 24.8 205 165-413 14-224 (271)
359 PRK14257 phosphate ABC transpo 100.0 6.1E-34 1.3E-38 334.3 25.7 221 843-1081 80-308 (329)
360 PRK14253 phosphate ABC transpo 100.0 6.5E-34 1.4E-38 324.1 24.9 215 843-1081 3-228 (249)
361 PRK14242 phosphate transporter 100.0 9.9E-34 2.2E-38 323.4 26.4 203 166-413 20-236 (253)
362 PRK13642 cbiO cobalt transport 100.0 4.9E-34 1.1E-38 329.5 24.1 216 843-1081 4-224 (277)
363 TIGR02770 nickel_nikD nickel i 100.0 3.9E-34 8.4E-39 321.8 22.5 201 871-1081 1-210 (230)
364 PRK14262 phosphate ABC transpo 100.0 8.5E-34 1.8E-38 323.3 25.6 214 844-1081 4-229 (250)
365 PRK14267 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 323.9 25.7 208 166-413 18-236 (253)
366 cd03299 ABC_ModC_like Archeal 100.0 7E-34 1.5E-38 320.6 24.6 204 167-413 14-218 (235)
367 TIGR03740 galliderm_ABC gallid 100.0 5.5E-34 1.2E-38 319.2 23.5 197 165-410 13-209 (223)
368 PRK13642 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 326.6 26.6 205 165-413 20-228 (277)
369 PRK14258 phosphate ABC transpo 100.0 8.7E-34 1.9E-38 324.9 25.6 221 843-1081 7-240 (261)
370 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.6E-34 7.8E-39 317.9 21.7 195 170-407 16-211 (211)
371 PRK14272 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 323.0 26.0 216 843-1081 4-231 (252)
372 PRK09700 D-allose transporter 100.0 4E-34 8.7E-39 358.6 24.6 219 843-1083 5-231 (510)
373 PRK11701 phnK phosphonate C-P 100.0 8.2E-34 1.8E-38 324.8 25.0 215 843-1081 6-236 (258)
374 TIGR03873 F420-0_ABC_ATP propo 100.0 8.3E-34 1.8E-38 324.4 24.8 208 165-413 14-225 (256)
375 cd03300 ABC_PotA_N PotA is an 100.0 8.7E-34 1.9E-38 319.3 24.7 206 165-413 13-219 (232)
376 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.8E-33 1E-37 362.6 35.3 210 842-1081 476-695 (710)
377 PRK14236 phosphate transporter 100.0 1.2E-33 2.6E-38 325.5 26.3 215 843-1081 25-251 (272)
378 COG1245 Predicted ATPase, RNas 100.0 2.7E-33 5.9E-38 317.4 28.5 173 872-1070 357-530 (591)
379 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.3E-34 1.6E-38 317.9 23.7 193 866-1079 32-224 (224)
380 PRK14247 phosphate ABC transpo 100.0 7.7E-34 1.7E-38 323.7 24.3 209 165-413 16-233 (250)
381 cd03235 ABC_Metallic_Cations A 100.0 3.1E-34 6.7E-39 318.9 20.3 200 165-407 12-213 (213)
382 PRK11231 fecE iron-dicitrate t 100.0 8.3E-34 1.8E-38 324.2 24.3 209 165-413 15-226 (255)
383 PRK10418 nikD nickel transport 100.0 9.5E-34 2.1E-38 323.4 24.7 213 843-1081 4-225 (254)
384 PRK13645 cbiO cobalt transport 100.0 5.3E-34 1.1E-38 331.4 22.8 206 165-413 24-239 (289)
385 PRK10744 pstB phosphate transp 100.0 1.5E-33 3.2E-38 323.0 26.0 206 166-413 27-243 (260)
386 PRK14275 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 327.6 25.3 215 843-1081 39-265 (286)
387 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-33 2.3E-38 316.1 24.2 211 844-1075 2-219 (220)
388 PRK14248 phosphate ABC transpo 100.0 9.6E-34 2.1E-38 325.9 24.5 215 843-1081 21-247 (268)
389 TIGR01978 sufC FeS assembly AT 100.0 7.4E-34 1.6E-38 322.6 23.2 213 165-413 13-233 (243)
390 COG4181 Predicted ABC-type tra 100.0 4E-34 8.7E-39 286.1 18.4 202 160-405 18-226 (228)
391 TIGR01193 bacteriocin_ABC ABC- 100.0 6.1E-33 1.3E-37 361.3 35.1 210 843-1081 473-692 (708)
392 PRK14257 phosphate ABC transpo 100.0 1.4E-33 3E-38 331.2 26.3 211 165-413 95-312 (329)
393 PRK15112 antimicrobial peptide 100.0 7.9E-34 1.7E-38 326.2 23.6 207 165-413 26-238 (267)
394 PRK14235 phosphate transporter 100.0 1.7E-33 3.7E-38 323.4 26.2 207 166-413 33-250 (267)
395 PRK10253 iron-enterobactin tra 100.0 6.3E-34 1.4E-38 326.8 22.6 210 165-413 20-232 (265)
396 PRK14261 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 322.3 25.1 215 843-1081 6-232 (253)
397 TIGR01277 thiQ thiamine ABC tr 100.0 9.8E-34 2.1E-38 314.8 23.3 199 167-408 13-212 (213)
398 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-33 2.5E-38 319.3 24.3 206 165-413 13-219 (237)
399 PRK10771 thiQ thiamine transpo 100.0 8.4E-34 1.8E-38 319.6 23.0 201 170-413 17-218 (232)
400 PRK14263 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 322.1 25.7 219 842-1081 7-240 (261)
401 PRK14251 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 321.6 25.2 215 843-1081 4-230 (251)
402 TIGR02633 xylG D-xylose ABC tr 100.0 9.8E-34 2.1E-38 354.5 25.9 220 844-1083 2-227 (500)
403 PRK11174 cysteine/glutathione 100.0 2.1E-34 4.6E-39 367.9 20.4 209 843-1081 349-567 (588)
404 PRK14249 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 321.0 25.6 219 843-1081 4-230 (251)
405 PRK15056 manganese/iron transp 100.0 8.6E-34 1.9E-38 326.8 23.4 218 843-1082 6-226 (272)
406 PRK14270 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 320.2 26.4 207 165-413 17-234 (251)
407 COG4148 ModC ABC-type molybdat 100.0 1.1E-34 2.3E-39 311.4 14.6 196 170-414 16-218 (352)
408 PRK13543 cytochrome c biogenes 100.0 1E-33 2.3E-38 314.6 23.1 201 843-1070 11-211 (214)
409 PRK09984 phosphonate/organopho 100.0 7.9E-34 1.7E-38 325.7 22.6 216 165-412 17-240 (262)
410 PRK14271 phosphate ABC transpo 100.0 3.3E-33 7.1E-38 322.0 27.6 219 843-1081 21-246 (276)
411 PRK13538 cytochrome c biogenes 100.0 8.9E-34 1.9E-38 312.9 21.9 199 844-1069 2-202 (204)
412 PRK15439 autoinducer 2 ABC tra 100.0 9.4E-34 2E-38 354.5 24.6 212 843-1083 11-226 (510)
413 PRK14255 phosphate ABC transpo 100.0 2.4E-33 5.2E-38 320.0 25.8 215 843-1081 5-231 (252)
414 PRK14256 phosphate ABC transpo 100.0 3E-33 6.4E-38 319.2 26.5 208 165-413 17-235 (252)
415 cd03262 ABC_HisP_GlnQ_permease 100.0 6.8E-34 1.5E-38 316.3 20.6 195 165-403 13-213 (213)
416 cd03231 ABC_CcmA_heme_exporter 100.0 9.2E-34 2E-38 311.9 21.3 195 845-1069 2-198 (201)
417 CHL00131 ycf16 sulfate ABC tra 100.0 2.8E-33 6.1E-38 319.5 26.0 220 843-1081 7-236 (252)
418 PRK14269 phosphate ABC transpo 100.0 2.8E-33 6E-38 318.1 25.7 205 165-413 15-229 (246)
419 PRK10419 nikE nickel transport 100.0 2E-33 4.4E-38 322.8 24.8 225 844-1083 4-238 (268)
420 PRK14274 phosphate ABC transpo 100.0 3.1E-33 6.7E-38 320.2 26.2 206 166-413 26-242 (259)
421 cd03252 ABCC_Hemolysin The ABC 100.0 3.3E-34 7.1E-39 324.1 17.8 209 845-1081 2-220 (237)
422 PRK14239 phosphate transporter 100.0 4E-33 8.6E-38 318.3 26.8 206 166-413 19-235 (252)
423 PRK14254 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 324.3 25.4 213 843-1081 39-264 (285)
424 PRK14237 phosphate transporter 100.0 4.1E-33 8.8E-38 320.3 26.9 211 165-413 33-250 (267)
425 PRK14245 phosphate ABC transpo 100.0 3.2E-33 7E-38 318.5 25.8 206 165-413 16-233 (250)
426 PRK14265 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 322.4 25.6 214 843-1081 20-253 (274)
427 KOG0062 ATPase component of AB 100.0 1.9E-33 4.1E-38 324.3 23.9 201 843-1080 362-563 (582)
428 PRK14238 phosphate transporter 100.0 2.1E-33 4.5E-38 323.2 24.3 215 843-1081 24-250 (271)
429 COG1132 MdlB ABC-type multidru 100.0 1.1E-33 2.4E-38 359.4 24.2 209 164-414 341-552 (567)
430 PRK11288 araG L-arabinose tran 100.0 1.6E-33 3.4E-38 352.3 25.1 217 843-1081 4-224 (501)
431 PRK14241 phosphate transporter 100.0 2E-33 4.2E-38 321.7 23.8 207 166-413 18-241 (258)
432 PRK10247 putative ABC transpor 100.0 1.4E-33 3E-38 316.2 22.0 209 843-1079 7-220 (225)
433 PRK14259 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 321.7 24.9 202 166-414 27-253 (269)
434 PRK10982 galactose/methyl gala 100.0 1.7E-33 3.7E-38 351.3 24.5 207 868-1083 10-220 (491)
435 PRK13547 hmuV hemin importer A 100.0 2.9E-33 6.3E-38 321.1 24.4 213 165-413 14-243 (272)
436 cd03297 ABC_ModC_molybdenum_tr 100.0 2.3E-33 5.1E-38 312.1 22.9 192 170-407 16-214 (214)
437 PRK11701 phnK phosphonate C-P 100.0 2.8E-33 6E-38 320.5 24.2 207 165-413 19-240 (258)
438 PRK14240 phosphate transporter 100.0 4.6E-33 1E-37 317.3 25.9 206 166-413 17-233 (250)
439 COG4987 CydC ABC-type transpor 100.0 2.5E-34 5.4E-39 335.0 15.4 202 164-414 350-561 (573)
440 PRK14262 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 317.1 25.6 207 165-413 16-233 (250)
441 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 9.2E-34 2E-38 367.7 22.2 205 165-414 466-673 (686)
442 TIGR02323 CP_lyasePhnK phospho 100.0 3.9E-33 8.3E-38 318.5 24.7 214 844-1081 4-233 (253)
443 PRK03695 vitamin B12-transport 100.0 2.4E-33 5.3E-38 318.6 22.9 198 871-1082 11-218 (248)
444 TIGR03375 type_I_sec_LssB type 100.0 2.6E-32 5.6E-37 354.7 35.5 211 843-1081 463-683 (694)
445 COG4618 ArpD ABC-type protease 100.0 9E-34 2E-38 326.8 19.3 212 164-416 348-562 (580)
446 PRK14243 phosphate transporter 100.0 3.6E-33 7.7E-38 320.2 24.2 214 843-1081 10-243 (264)
447 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.2E-33 2.7E-38 323.5 20.2 211 843-1082 2-221 (275)
448 TIGR01166 cbiO cobalt transpor 100.0 1.7E-33 3.6E-38 307.3 20.3 179 868-1056 4-188 (190)
449 TIGR00630 uvra excinuclease AB 100.0 6.2E-32 1.3E-36 348.2 38.0 104 971-1081 808-920 (924)
450 PRK14246 phosphate ABC transpo 100.0 5.9E-33 1.3E-37 316.8 25.4 216 843-1081 10-236 (257)
451 cd03230 ABC_DR_subfamily_A Thi 100.0 2.5E-33 5.4E-38 301.0 21.0 168 845-1072 2-171 (173)
452 COG4604 CeuD ABC-type enteroch 100.0 1.6E-34 3.5E-39 295.6 11.0 207 867-1083 12-222 (252)
453 PRK14266 phosphate ABC transpo 100.0 4.9E-33 1.1E-37 317.1 24.5 219 843-1081 3-229 (250)
454 PRK10418 nikD nickel transport 100.0 5.1E-33 1.1E-37 317.4 24.6 203 166-413 17-229 (254)
455 PRK14248 phosphate ABC transpo 100.0 9.4E-33 2E-37 317.8 26.9 204 165-413 34-251 (268)
456 cd03245 ABCC_bacteriocin_expor 100.0 1.4E-33 3.1E-38 315.3 19.3 209 844-1079 3-220 (220)
457 PRK13546 teichoic acids export 100.0 7.5E-33 1.6E-37 316.0 25.6 194 867-1082 35-228 (264)
458 PRK13539 cytochrome c biogenes 100.0 2.5E-33 5.4E-38 310.0 21.0 197 844-1070 3-199 (207)
459 PRK10790 putative multidrug tr 100.0 2.7E-33 5.9E-38 357.8 24.5 199 166-414 355-563 (592)
460 PRK14251 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 315.7 25.6 207 165-413 17-234 (251)
461 TIGR01846 type_I_sec_HlyB type 100.0 1.4E-32 3.1E-37 356.7 31.5 212 842-1081 454-675 (694)
462 COG1132 MdlB ABC-type multidru 100.0 7.1E-34 1.5E-38 361.2 18.7 211 842-1081 327-547 (567)
463 COG4598 HisP ABC-type histidin 100.0 6.5E-34 1.4E-38 286.1 14.3 206 866-1082 16-237 (256)
464 PRK09580 sufC cysteine desulfu 100.0 7.1E-33 1.5E-37 315.5 24.8 219 844-1081 2-230 (248)
465 PRK14252 phosphate ABC transpo 100.0 1E-32 2.2E-37 316.9 26.3 215 843-1081 16-244 (265)
466 TIGR00958 3a01208 Conjugate Tr 100.0 2.8E-32 6.1E-37 353.5 33.5 210 843-1081 478-697 (711)
467 PRK10790 putative multidrug tr 100.0 2.4E-33 5.1E-38 358.4 23.0 210 842-1081 339-558 (592)
468 COG4152 ABC-type uncharacteriz 100.0 1.6E-33 3.5E-38 297.5 17.6 209 163-416 13-221 (300)
469 PRK03695 vitamin B12-transport 100.0 5E-33 1.1E-37 316.1 23.0 201 167-413 11-221 (248)
470 PRK14275 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 324.2 21.3 204 165-413 52-269 (286)
471 TIGR01189 ccmA heme ABC export 100.0 3.8E-33 8.3E-38 306.4 21.2 184 868-1068 12-197 (198)
472 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-33 2.5E-38 319.2 17.5 209 845-1081 2-220 (234)
473 PRK14260 phosphate ABC transpo 100.0 9.3E-33 2E-37 316.2 25.2 206 166-413 21-242 (259)
474 PRK14244 phosphate ABC transpo 100.0 6.1E-33 1.3E-37 316.4 23.5 212 165-413 18-236 (251)
475 PRK11176 lipid transporter ATP 100.0 1.9E-33 4E-38 359.1 21.4 212 843-1081 341-562 (582)
476 TIGR02982 heterocyst_DevA ABC 100.0 8.8E-33 1.9E-37 308.7 24.2 196 165-403 18-219 (220)
477 PRK14265 phosphate ABC transpo 100.0 9.2E-33 2E-37 318.2 24.9 228 108-413 10-257 (274)
478 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-33 3E-38 319.3 17.6 196 869-1081 16-221 (238)
479 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.1E-33 4.5E-38 366.1 21.7 206 165-414 492-700 (710)
480 PRK14236 phosphate transporter 100.0 1.8E-32 3.9E-37 315.8 26.9 206 166-413 39-255 (272)
481 PRK14272 phosphate ABC transpo 100.0 9.3E-33 2E-37 315.2 24.3 208 165-413 17-235 (252)
482 PRK14255 phosphate ABC transpo 100.0 2E-32 4.3E-37 312.5 26.9 207 165-413 18-235 (252)
483 PRK11176 lipid transporter ATP 100.0 2.7E-33 5.8E-38 357.6 22.1 209 165-414 356-567 (582)
484 PRK10419 nikE nickel transport 100.0 9.5E-33 2.1E-37 317.2 24.3 207 165-413 25-240 (268)
485 PRK10261 glutathione transport 100.0 6.4E-33 1.4E-37 353.7 25.3 207 165-413 337-552 (623)
486 PRK11160 cysteine/glutathione 100.0 4.1E-33 8.8E-38 353.6 23.2 201 165-414 353-562 (574)
487 PRK11160 cysteine/glutathione 100.0 2E-33 4.4E-38 356.4 20.4 212 842-1081 337-557 (574)
488 PRK14258 phosphate ABC transpo 100.0 1.8E-32 4E-37 314.0 26.2 208 166-413 21-244 (261)
489 TIGR00958 3a01208 Conjugate Tr 100.0 3.8E-33 8.3E-38 361.6 23.1 206 165-414 494-702 (711)
490 cd03254 ABCC_Glucan_exporter_l 100.0 1.7E-33 3.8E-38 316.6 17.4 211 843-1081 2-221 (229)
491 PRK14238 phosphate transporter 100.0 1.6E-32 3.6E-37 315.8 25.8 204 165-413 37-254 (271)
492 COG1129 MglA ABC-type sugar tr 100.0 6.5E-33 1.4E-37 329.4 22.9 228 843-1092 8-242 (500)
493 cd03229 ABC_Class3 This class 100.0 4.2E-33 9.1E-38 300.7 19.5 170 845-1072 2-177 (178)
494 COG4161 ArtP ABC-type arginine 100.0 3.5E-33 7.5E-38 275.9 17.0 215 843-1081 2-225 (242)
495 TIGR03269 met_CoM_red_A2 methy 100.0 9.1E-33 2E-37 347.2 25.5 214 845-1081 2-253 (520)
496 cd03252 ABCC_Hemolysin The ABC 100.0 5.3E-33 1.1E-37 314.3 21.0 206 165-414 15-225 (237)
497 PRK14271 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 317.1 24.6 211 165-413 34-250 (276)
498 PRK10247 putative ABC transpor 100.0 8.1E-33 1.7E-37 309.9 22.2 199 165-410 20-223 (225)
499 PRK14264 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 320.9 25.3 221 843-1081 45-284 (305)
500 COG4987 CydC ABC-type transpor 100.0 9.1E-34 2E-38 330.3 14.8 212 843-1082 336-557 (573)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-254 Score=2343.34 Aligned_cols=1339 Identities=53% Similarity=0.919 Sum_probs=1255.8
Q ss_pred cchHHhhHHHHHhhCCChhhhhhcccccC-CCCcceecccCcChHHhHHHHHHhhhccccchHHHHHHHHHHHHhcCCCC
Q 000529 36 EDDEEALKWAAIEKLPTYNRLKKGLLTTS-QGEAFEVDVSNLGLQERQRLINKLVTVTEVDNEKFLLKLKNRIERVGIVL 114 (1441)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 114 (1441)
+||||+|||||+|||||++| +++.+. ++ ++|+.+++..+++.++++..+..++|+++++.++++|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 665532 22 79999999999999999999999999999999999999998 89
Q ss_pred CcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHH
Q 000529 115 PTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTL 194 (1441)
Q Consensus 115 p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTL 194 (1441)
|.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+++||+|+||.++||||++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998765 999999999998887776654 5567899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcC
Q 000529 195 LLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAG 274 (1441)
Q Consensus 195 L~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 274 (1441)
|++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999998877889999999999999989999999999999999999999999999999999887 666776642
Q ss_pred CCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000529 275 IKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGL 354 (1441)
Q Consensus 275 i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgL 354 (1441)
..+|++++++||++|+||+||++++||+||||||||+||+++++++++++|||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHH
Q 000529 355 DSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1441)
Q Consensus 355 Ds~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 434 (1441)
|++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|++||+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcCcccccccccccccCcccccchHHHHHHHHHHHHH
Q 000529 435 EVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELL 514 (1441)
Q Consensus 435 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 514 (1441)
+++++++++++|..+..|+.+.+++++.+.|..++.+.++..+++.|+++.+.++.++..++|.++.|+|+++|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCC
Q 000529 515 LMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKF 594 (1441)
Q Consensus 515 ~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~ 594 (1441)
+++||.+++++++++.+++++++|++|+++.+ ++..++..+.|++||++++.++++++++.+++.++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999885 5566788999999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 000529 595 FPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFA 674 (1441)
Q Consensus 595 y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~ 674 (1441)
||||+|+++++++++|++++++++|++|+||++|+.++++|||.+++++++.++|++++|++++++++++.+|+.+|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCCCcccc------------CC---CccchhHHhhhc
Q 000529 675 VLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFT------------PT---STESLGVQVLES 739 (1441)
Q Consensus 675 ~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~------------~~---~~~~~g~~~l~~ 739 (1441)
++++.+++||+|++.+||+||+|++|++|++|++++++.|||++++|.|.. .. ...+.|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 999999999999999999999999999999999999999999999999971 11 235678899999
Q ss_pred cccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCc
Q 000529 740 REFF-----AHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNR 814 (1441)
Q Consensus 740 ~~~~-----~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1441)
+++. ...+|+|+++|+++||.++|++++.+++.|+++..+.++.+..+.......... . .....
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~---------~--~~~~~ 758 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS---------A--GSSSE 758 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh---------c--ccccc
Confidence 8887 778999999999999999999999999999999888777765443322110000 0 00000
Q ss_pred ccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCC
Q 000529 815 ERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAG 894 (1441)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaG 894 (1441)
.. ...+......+++..|+.+..++++||.|.+++|-+++.+| +++++|+|||+.++||.++||||+||||
T Consensus 759 -----~~-~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAG 829 (1391)
T KOG0065|consen 759 -----IE-KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAG 829 (1391)
T ss_pred -----cc-ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCc
Confidence 00 00011111345778899999999999999999998887776 6788999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Q 000529 895 KTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEV 974 (1441)
Q Consensus 895 KSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~ 974 (1441)
||||||+|+||+++|.++|+|.+||.|+++.+++|.+|||+|+|+|.|.+||+|+|.|+|.||+|.+++.+++.+.||++
T Consensus 830 KTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~V 909 (1391)
T KOG0065|consen 830 KTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEV 909 (1391)
T ss_pred hHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC-CeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEec
Q 000529 975 MELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1053 (1441)
Q Consensus 975 l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p-~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H 1053 (1441)
++.+||++++|.+||.|| +|||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+|
T Consensus 910 i~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIH 988 (1391)
T KOG0065|consen 910 IELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIH 988 (1391)
T ss_pred HHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 999999999999999999 999999999999999999999 899999999999999999999999999999999999999
Q ss_pred CCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcccCCCCCCccccchhcccchhhhhccccHHHHHHh
Q 000529 1054 QPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVSASSQEVALGVDFCDIYKR 1133 (1441)
Q Consensus 1054 ~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~ 1133 (1441)
|||.++++.||++++|++||++||+||+|++++++++||++++|++ |++..||||||||+++.+.+...+.||+++|++
T Consensus 989 QPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~ 1067 (1391)
T KOG0065|consen 989 QPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKN 1067 (1391)
T ss_pred CCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhc
Confidence 9999999999999999999999999999999999999999999885 666669999999999998888888999999999
Q ss_pred cHHHHHHHHHHHhhCCCCCC-CCCCcccccCCccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCC
Q 000529 1134 SELYRRNKLLIEDLSKPAPG-SKDLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGG 1212 (1441)
Q Consensus 1134 S~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~ 1212 (1441)
|++++++++++++++.++++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||++|+
T Consensus 1068 S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~ 1147 (1391)
T KOG0065|consen 1068 SEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH 1147 (1391)
T ss_pred cHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC
Confidence 99999999999999999988 78888999999999999999999999999999999999999999999999999999994
Q ss_pred CCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeec
Q 000529 1213 KTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVFVERMVFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYA 1292 (1441)
Q Consensus 1213 ~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~ 1292 (1441)
++||++|.+|++|+++++.+.+++..++|.+..||.++|||+++||||+.||++||+++|+||.++++++|.+|+|+
T Consensus 1148 ---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~ 1224 (1391)
T KOG0065|consen 1148 ---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYY 1224 (1391)
T ss_pred ---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeee
Confidence 68999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHH
Q 000529 1293 MMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIA 1372 (1441)
Q Consensus 1293 ~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~ 1372 (1441)
|+||++++.+|+||++++++..+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+||||+||++
T Consensus 1225 ~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~t 1304 (1391)
T KOG0065|consen 1225 PIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVT 1304 (1391)
T ss_pred eccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCccccc----------CCCcHHHHHHhhcC----CcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000529 1373 WTLYGLIASQYGDVEDKIE----------TGETVKHFLRDYYG----FKHSFLGAVAGVLIAFAALFGILFPLGIKQFNF 1438 (1441)
Q Consensus 1373 y~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1438 (1441)
|.++|++..++||.+..|. +|+||++|+++++| |.++.......+.++|.+++.+++.+++|+.||
T Consensus 1305 y~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~ 1384 (1391)
T KOG0065|consen 1305 YTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNF 1384 (1391)
T ss_pred HHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHH
Confidence 9999999999999999883 45799999999999 999999988899999999999999999999999
Q ss_pred cCC
Q 000529 1439 QRR 1441 (1441)
Q Consensus 1439 ~~r 1441 (1441)
|||
T Consensus 1385 wrn 1387 (1391)
T KOG0065|consen 1385 WRN 1387 (1391)
T ss_pred HHh
Confidence 987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-237 Score=2360.37 Aligned_cols=1421 Identities=60% Similarity=1.058 Sum_probs=1273.8
Q ss_pred cccccCCCCcccCC---C----CCcchHHhhHHHHHhhCCChhhhhhcccccC-----CCC---cceecccCcChHHhHH
Q 000529 19 SRWRTGSVGAFSMS---S----REEDDEEALKWAAIEKLPTYNRLKKGLLTTS-----QGE---AFEVDVSNLGLQERQR 83 (1441)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1441)
++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ .+|+|+++|+.+|++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 34633 5788542 1 3578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHHhhhccccchHHHHHHHHHHHHhcCCCCCcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccc
Q 000529 84 LINKLVTVTEVDNEKFLLKLKNRIERVGIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKK 163 (1441)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1441)
+++++++++++|++++++++++|.+++|+++|++||+|+||+|++++.++++.+||++|...+.++.+.+.++...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999988887766555445556
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCH
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++||+|+|+.++|||+++|+||||||||||||+|+|+++|+.+++|+|+|||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 78899999999999999999999999999999999999998777899999999999877667889999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+|||.|+++|++.+.++++..+++++|++.++.|+.++|.+|++...++.+.+..++++|+.+||++|+||.||+++.||
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999999877777766777888888888999999999999888887778889999999999999999999999999
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred EEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcCccc
Q 000529 404 VYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFD 483 (1441)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1441)
+|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++++.++++.|.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887766777778999999999999999888888777776
Q ss_pred ccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHHHHH
Q 000529 484 KSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFF 563 (1441)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lf~ 563 (1441)
++..++.....++|..++++|+++|++|++++++||+..+++|+++.+++|+++|++||+++.+..+..++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 66556665666789999999999999999999999999999999999999999999999987765555667888999999
Q ss_pred HHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHH
Q 000529 564 TIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLL 643 (1441)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~ 643 (1441)
++++.+++++++++.++.+||+|+|||+.+||++|+|++|++++++|+.++++++|++|+|||+||++++++||.|++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCCCcc
Q 000529 644 LAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKK 723 (1441)
Q Consensus 644 ~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~ 723 (1441)
++.+++++++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|+++++++|||.+..|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred cc-CCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccC--c
Q 000529 724 FT-PTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGG--T 800 (1441)
Q Consensus 724 ~~-~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 800 (1441)
.. .+.....|.++|+.+++.....|+|++++++++++++|+++++++|+|.++..+....+.++............ .
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 32 23345789999999999988899999999999999999999999999998766655443322111000000000 0
Q ss_pred ccccCCCC---CC---CCCccc-C-CCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeee
Q 000529 801 VQLSNCGE---SG---NDNRER-N-SSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLL 872 (1441)
Q Consensus 801 ~~~~~~~~---~~---~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL 872 (1441)
........ .. ...... . ..............++++.+|+.|..++|+||+|+++.+..++..+..++++++|
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL 896 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLL 896 (1470)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEe
Confidence 00000000 00 000000 0 0000000000112345666789999999999999999887665555555667899
Q ss_pred eceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHHH
Q 000529 873 NGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFY 952 (1441)
Q Consensus 873 ~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f 952 (1441)
+|||++++||+++|||||||||||||||+|+|+.++|..+|+|.+||.+.++..+++.+|||+|+|.+++.+||+|+|.|
T Consensus 897 ~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~ 976 (1470)
T PLN03140 897 REVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIY 976 (1470)
T ss_pred eCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHH
Confidence 99999999999999999999999999999999987777899999999887655567789999999999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000529 953 SAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1441)
Q Consensus 953 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1032 (1441)
++.++.+...+.+++++.++++++.+||.+++|+++|.+++++|||||||||+||+||+.+|+||||||||||||+.++.
T Consensus 977 ~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~ 1056 (1470)
T PLN03140 977 SAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1056 (1470)
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Confidence 99888776666666777899999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcccCCCCCCccccch
Q 000529 1033 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWML 1112 (1441)
Q Consensus 1033 ~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l 1112 (1441)
.+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||+
T Consensus 1057 ~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l 1136 (1470)
T PLN03140 1057 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWML 1136 (1470)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhh
Confidence 99999999998899999999999977899999999999889999999999988999999999988878999999999999
Q ss_pred hcccchhhhhccccHHHHHHhcHHHHHHHHHHHhhCCCCCCCCCCcccccCCccHHHHHHHHHHHHHHHHhcChHHHHHH
Q 000529 1113 EVSASSQEVALGVDFCDIYKRSELYRRNKLLIEDLSKPAPGSKDLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVR 1192 (1441)
Q Consensus 1113 ~v~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r 1192 (1441)
|+++.+.+.....||++.|++|++++++++.++++..+.++.++..++++|++++|+|++.|+||+++++||||.|+.+|
T Consensus 1137 ~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r 1216 (1470)
T PLN03140 1137 EVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVR 1216 (1470)
T ss_pred hhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHH
Confidence 99987666556679999999999999988888877777666666666788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHH
Q 000529 1193 FLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVFVERMVFYREVAAGMFSGIPWALAQI 1272 (1441)
Q Consensus 1193 ~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~ 1272 (1441)
+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++++|++|++
T Consensus 1217 ~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~ 1296 (1470)
T PLN03140 1217 FFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQV 1296 (1470)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 99999999999999999998777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccc
Q 000529 1273 MIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFI 1352 (1441)
Q Consensus 1273 l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~ 1352 (1441)
++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+.++++++++|++||||+
T Consensus 1297 l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~ 1376 (1470)
T PLN03140 1297 VCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFF 1376 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccccc-C----CCcHHHHHHhhcCCcccchhHHHHHHHHHHHHHHH
Q 000529 1353 IPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDKIE-T----GETVKHFLRDYYGFKHSFLGAVAGVLIAFAALFGI 1427 (1441)
Q Consensus 1353 i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~----g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~ 1427 (1441)
+|+++||+||+|+||+||++|+++|+++|||+|.+..|+ + +.++++|++++|||+++++|++++|+++|+++|++
T Consensus 1377 i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~ 1456 (1470)
T PLN03140 1377 IPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAF 1456 (1470)
T ss_pred cChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999887663 2 36899999999999999999999999999999999
Q ss_pred HHHHHHHhccccCC
Q 000529 1428 LFPLGIKQFNFQRR 1441 (1441)
Q Consensus 1428 ~~~~~l~~~~~~~r 1441 (1441)
++++++|++|||||
T Consensus 1457 ~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1457 IFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHhhcccC
Confidence 99999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.7e-187 Score=1885.82 Aligned_cols=1287 Identities=32% Similarity=0.534 Sum_probs=1062.8
Q ss_pred ccchHHHHHHHHHHHHhcCCCCC--cceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeec
Q 000529 93 EVDNEKFLLKLKNRIERVGIVLP--TVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKD 170 (1441)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~g~~~p--~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 170 (1441)
+.|++++++.++++.++.+...| +++|+|+||+|++ ...+....||+.|...+....+...+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 35777888776666666666666 9999999999999 344566789999988876664433221 1234456789999
Q ss_pred eEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCCHHHHH
Q 000529 171 VSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL-KVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTVRETL 247 (1441)
Q Consensus 171 vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1441)
+|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 999999999999999999999999999999974311 24999999999875432 235699999999999999999999
Q ss_pred HHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChh
Q 000529 248 AFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGG 327 (1441)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGG 327 (1441)
.|+++++.+..+.. ...+.+ ..+..++.+++.+||++++||.||+++.+|||||
T Consensus 160 ~f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 99988764211100 000111 1122356789999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEc
Q 000529 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQG 407 (1441)
Q Consensus 328 qrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G 407 (1441)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999887567889999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcCccccc--
Q 000529 408 PRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKS-- 485 (1441)
Q Consensus 408 ~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 485 (1441)
+++++.+||+++||+||++.++|||+++++++.++ +++... +...+.+++++.++|+.++.++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987543 222111 11123578899999999987776666554322110
Q ss_pred -------------ccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccc
Q 000529 486 -------------KSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVT 552 (1441)
Q Consensus 486 -------------~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~ 552 (1441)
...+.....+.|..++++|+++|++|+++.++||+..++.++++.+++|+++|++|++++.+ ..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TS 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---ch
Confidence 00011223456889999999999999999999999999999999999999999999977643 34
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCC
Q 000529 553 DGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPN 632 (1441)
Q Consensus 553 ~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1441)
+.+.+.|++||++++.++.++.++..++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 56778999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHH
Q 000529 633 AGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGIL 712 (1441)
Q Consensus 633 ~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~ 712 (1441)
+++||.+++++++...++.++++++++++++..+|+.+++++++++++|+||++++++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCCcccc--C----------------------CCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 000529 713 ANEFLGHSWKKFT--P----------------------TSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFA 768 (1441)
Q Consensus 713 ~nef~~~~~~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~ 768 (1441)
.|||.+..+.|.. | +.+...|.++|+. .+.....|+|.+++++++++++|.++++
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999888741 1 0123478888885 3344567999999999999999999999
Q ss_pred HHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCC--cccccccCCCCC-CCccccCCCceee
Q 000529 769 LALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSS--SLTEAEASHPKK-RGMVLPFEPYSLT 845 (1441)
Q Consensus 769 l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~ 845 (1441)
+++.|.++.......+.......... .+.....+....+.++.... .....+...... .....+.....++
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRA------KKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFH 761 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccch------hhcccccccccccccccccCCCCccccccccccccccccccCCCceEE
Confidence 99999885544332221111000000 00000000000011111000 000000000000 0000001123578
Q ss_pred EeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCccCCc
Q 000529 846 FDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQ 924 (1441)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~ 924 (1441)
|+||+|+++.+ .+++.+|+|||++++|||++|||||||||||||||+|+|+.+++ ..+|+|.+||.+...
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999987532 13467999999999999999999999999999999999987644 356999999998753
Q ss_pred cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000529 925 ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRL 1004 (1441)
Q Consensus 925 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv 1004 (1441)
.+++.+|||+|+|.+++.+||+|++.|++.++.+...+.++++++++++++.++|.+++|+.+|.++. +|||||||||
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHH
Confidence 46778999999999999999999999999988776666667778899999999999999999987644 7999999999
Q ss_pred HHHHHHhhCCC-eeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1005 TIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1005 ~iA~aL~~~p~-iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 99999999999999999999999999888999999999999767889999999998889999999998
Q ss_pred cchhHHHHHHhCCCcccCCCCCCccccchhcccchhhhhccccHHHHHHhcHHHHHHHHHHHhhCCCCCCCC---CCccc
Q 000529 1084 HSCHLISYFEAIPGVEKIKDGYNPATWMLEVSASSQEVALGVDFCDIYKRSELYRRNKLLIEDLSKPAPGSK---DLHFA 1160 (1441)
Q Consensus 1084 ~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~---~~~~~ 1160 (1441)
+++++++||+++ |.++||+++|||||+||+++...+.....||.+.|++|++++...+.++++..+..... +....
T Consensus 991 ~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1394)
T TIGR00956 991 NSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDAL 1069 (1394)
T ss_pred ccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccc
Confidence 889999999987 55579999999999999998654433446899999999998877666555433221111 11122
Q ss_pred ccCCccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhh
Q 000529 1161 TQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCI 1240 (1441)
Q Consensus 1161 ~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~ 1240 (1441)
++|+.|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .
T Consensus 1070 ~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~ 1145 (1394)
T TIGR00956 1070 SKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-Q 1145 (1394)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 4689999999999999999999999999999999999999999999999986 47899999999999988877763 4
Q ss_pred hhhhhHHhhhHHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhH-------HHHHHHHHHH
Q 000529 1241 SVQPVVFVERMVF-YREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAK-------FFWYIFYMYF 1312 (1441)
Q Consensus 1241 ~~~~~~~~er~vf-~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~ 1312 (1441)
+++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+ ||+|++++++
T Consensus 1146 ~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~ 1225 (1394)
T TIGR00956 1146 QYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTM 1225 (1394)
T ss_pred HhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHH
Confidence 5668888888886 8999999999999999999999999999999999999999999988866 9999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccccc-
Q 000529 1313 ALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDKIE- 1391 (1441)
Q Consensus 1313 ~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~- 1391 (1441)
..++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.
T Consensus 1226 ~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~ 1305 (1394)
T TIGR00956 1226 FFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKV 1305 (1394)
T ss_pred HHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987773
Q ss_pred ---------CCCcHHHHH-------------------------------HhhcCCcccchhHHHHHHHHHHHHHHHHHHH
Q 000529 1392 ---------TGETVKHFL-------------------------------RDYYGFKHSFLGAVAGVLIAFAALFGILFPL 1431 (1441)
Q Consensus 1392 ---------~g~~~~~~~-------------------------------~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~ 1431 (1441)
+|+||++|+ ...+|+++++.|+|++++++|++++ +++++
T Consensus 1306 ~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~ 1384 (1394)
T TIGR00956 1306 KELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIATV 1384 (1394)
T ss_pred cccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHHH
Confidence 244555432 2356888999999999999999988 77888
Q ss_pred HHHhc
Q 000529 1432 GIKQF 1436 (1441)
Q Consensus 1432 ~l~~~ 1436 (1441)
++.+.
T Consensus 1385 ~l~~~ 1389 (1394)
T TIGR00956 1385 FFYWL 1389 (1394)
T ss_pred hhheE
Confidence 88765
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.2e-94 Score=910.98 Aligned_cols=581 Identities=25% Similarity=0.412 Sum_probs=486.7
Q ss_pred CCceeeEeceEEEEeccchh----------------hccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhc
Q 000529 840 EPYSLTFDEVVYSVDMPQQM----------------KLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 903 (1441)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~ 903 (1441)
.+.+++|.|++|+++..... +.....++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 36789999999998754210 01112334578999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000529 904 GRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL 983 (1441)
Q Consensus 904 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 983 (1441)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999886532 345689999999999999999999999887766555566667789999999999999
Q ss_pred ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhh
Q 000529 984 RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1063 (1441)
Q Consensus 984 ~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~ 1063 (1441)
+|+++|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred CeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcccCCCCCCccccchhcccchhhhh------c---cccHHHHHHhc
Q 000529 1064 DELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVSASSQEVA------L---GVDFCDIYKRS 1134 (1441)
Q Consensus 1064 D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~------~---~~~~~~~~~~S 1134 (1441)
|++++|++ |+++|.|+. +++.+||+++| . +||+++|||||++|+++...+.. . .....+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999984 899999997 68999999996 3 59999999999999987532100 0 01123445432
Q ss_pred HHHHHHHHHHHh--hCC-CCC-----CCCCCc-ccccCCccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 000529 1135 ELYRRNKLLIED--LSK-PAP-----GSKDLH-FATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGS 1205 (1441)
Q Consensus 1135 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1205 (1441)
. .+...+.++. ... +.+ ..+... ..+.+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 011 000 001000 11235578999999999999988 99999999999999999999999
Q ss_pred hhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 000529 1206 IFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVFVERMVFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLI 1285 (1441)
Q Consensus 1206 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~ 1285 (1441)
+||+++ ..+++++.|++|++++++++.+++.+++.++.||+||+||+++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999999988888888999999999999999999999999999999999999999999
Q ss_pred hheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 000529 1286 YSSIVYAMMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWY 1365 (1441)
Q Consensus 1286 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~ 1365 (1441)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||..+|+.++++++.++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hccCHHHHHHHHHHHHHhCCCcc-----cccCC----CcHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhc
Q 000529 1366 YWANPIAWTLYGLIASQYGDVED-----KIETG----ETVKHFLRDYYGFKHSFLGAVAGVLIAFAALFGILFPLGIKQF 1436 (1441)
Q Consensus 1366 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~g----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1436 (1441)
+|+||++|++++++.|||++.+. .|+.. ...+.++. ..++++...|.++++|++++++|+++++++|++.
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 46311 11122332 2344455789999999999999999999999988
Q ss_pred cc
Q 000529 1437 NF 1438 (1441)
Q Consensus 1437 ~~ 1438 (1441)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.1e-94 Score=911.18 Aligned_cols=564 Identities=30% Similarity=0.510 Sum_probs=499.4
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCccCCccccceEEEEeccCCCCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987543 358999999998765567788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTs 1024 (1441)
|+||+.|++.++.+...+.++++++++++++.+||.+++|+.+|+++ .++|||||||||+||+||+++|+||+|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999887766777778889999999999999999999764 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcccCCCC
Q 000529 1025 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKDG 1104 (1441)
Q Consensus 1025 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~~ 1104 (1441)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||++++ .+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g--~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG--HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC--CCCCCC
Confidence 9999999999999999998899999999999888999999999998 5899999997 67899999995 369999
Q ss_pred CCccccchhcccchhhhh-----ccccHHHHHHhcHHHHHHHHHHHhhCCCCCC---CCCCcccccCCccHHHHHHHHHH
Q 000529 1105 YNPATWMLEVSASSQEVA-----LGVDFCDIYKRSELYRRNKLLIEDLSKPAPG---SKDLHFATQYSQSAFSQFMACLW 1176 (1441)
Q Consensus 1105 ~npad~~l~v~~~~~~~~-----~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~ 1176 (1441)
.|||||++|+++...+.. ...++.+.|++|+.+++..+.......+.++ .......++|..+++.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543211 1134667787777666554433321111111 11111234678899999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHHhhhHHHHhh
Q 000529 1177 KQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVFVERMVFYRE 1256 (1441)
Q Consensus 1177 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE 1256 (1441)
|+++++||||.+..+|+++++++|+++|++||+++. ++++++++.|++|++++++++.+++.+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999975 46789999999999999999988888889999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 000529 1257 VAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAVTPTHHIASI 1336 (1441)
Q Consensus 1257 ~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1336 (1441)
+++|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCcc-cccCC-------CcHHHHHHhhcCCcc
Q 000529 1337 VSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVED-KIETG-------ETVKHFLRDYYGFKH 1408 (1441)
Q Consensus 1337 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~-~~~~g-------~~~~~~~~~~~g~~~ 1408 (1441)
++++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|..+ .+ ++++.+.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~-g~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSS-GEVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcC-hHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999998775 56421 12 466667899999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000529 1409 SFLGAVAGVLIAFAALFGILFPLGIKQFNFQRR 1441 (1441)
Q Consensus 1409 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1441 (1441)
++.|.+++++++++++|+++++++||+....+|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999998766655
No 6
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-94 Score=900.12 Aligned_cols=575 Identities=33% Similarity=0.574 Sum_probs=503.5
Q ss_pred CceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcC
Q 000529 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISG 919 (1441)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g 919 (1441)
+..+.|+|+++..+.+.. ..+++|+|||++++|||++|||||||||||||||+|+|+..++ ..+|+|.+||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 457899999988765421 3578999999999999999999999999999999999998764 7899999999
Q ss_pred ccCCccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 920 YPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 920 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
++...+.+++.+|||+|+|.+.|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|+++.+|+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88877888999999999999999999999999999999999888999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 7999999
Q ss_pred CCCCcchhHHHHHHhCCCcccCCCCCCccccchhcccch--h-hhhc---cccHHHHHH-hcHHHHHHHHHHHhhCCCCC
Q 000529 1080 PLGHHSCHLISYFEAIPGVEKIKDGYNPATWMLEVSASS--Q-EVAL---GVDFCDIYK-RSELYRRNKLLIEDLSKPAP 1152 (1441)
Q Consensus 1080 ~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~--~-~~~~---~~~~~~~~~-~S~~~~~~~~~~~~~~~~~~ 1152 (1441)
+. +++.+||+++| .+||+++|||||.+|+.+.. . +... .....+.++ .....+......+.+..
T Consensus 254 ~~----~~~~~ff~~~G--~~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 324 (613)
T KOG0061|consen 254 SP----RELLEFFSSLG--FPCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLST--- 324 (613)
T ss_pred CH----HHHHHHHHhCC--CCCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhccc---
Confidence 98 68899999996 35999999999999998842 1 1100 000111111 11111110000011111
Q ss_pred CCCCCcccccCCccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHH
Q 000529 1153 GSKDLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALI 1232 (1441)
Q Consensus 1153 ~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~ 1232 (1441)
.+. .+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||+++.+ ..+++++.|++|+.+.
T Consensus 325 -~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~~ 398 (613)
T KOG0061|consen 325 -SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFILS 398 (613)
T ss_pred -ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHHH
Confidence 011 1111278999999999999999999999999999999999999999999999753 5667799999999999
Q ss_pred HHhHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHHH
Q 000529 1233 FLGFEYCISVQPVVFVERMVFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMYF 1312 (1441)
Q Consensus 1233 ~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~ 1312 (1441)
++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++.+++
T Consensus 399 ~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~ 478 (613)
T KOG0061|consen 399 FMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILL 478 (613)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHH
Confidence 99888888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccccc-
Q 000529 1313 ALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDKIE- 1391 (1441)
Q Consensus 1313 ~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~- 1391 (1441)
..++++++|++++++.||...|..+++++...+++|+||+++.+.||.||+|++|+|+++|++||++.|||++....|.
T Consensus 479 ~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~ 558 (613)
T KOG0061|consen 479 SSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFL 558 (613)
T ss_pred HHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997333342
Q ss_pred C-----CCcHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000529 1392 T-----GETVKHFLRDYYGFKHSFLGAVAGVLIAFAALFGILFPLGIKQFNFQR 1440 (1441)
Q Consensus 1392 ~-----g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1440 (1441)
. ..+..+++ .+++++.++.|.++.++++++++|++++++++++....+
T Consensus 559 ~~~~~~~~~~~~~l-~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 559 SGNLCCESTGEDVL-KQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred CcCCcccccHHHHH-HhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 23455655 568999999999999999999999999999999765443
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.6e-91 Score=945.18 Aligned_cols=561 Identities=24% Similarity=0.417 Sum_probs=494.7
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--ceEEEEEEEcCccCCc--cccceEEEEeccCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSP 942 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 942 (1441)
.++++|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.++|
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998632 2468999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCC----CCCHHHHHH-HHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCee
Q 000529 943 FVTVYESLFYSAWLRLPP----EVNSETRKM-FIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSII 1017 (1441)
Q Consensus 943 ~lTv~E~l~f~~~lr~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iL 1017 (1441)
.+||+|++.|++.++.+. ..+.++..+ .++++++.+||.+++|+++|+..+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999887653 223333333 357789999999999999999888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCC
Q 000529 1018 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIP 1096 (1441)
Q Consensus 1018 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~ 1096 (1441)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+|+. +++.+||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999874 999999999998789999999999985 899999997 68899999996
Q ss_pred CcccCCCCCCccccchhcccchhhh----------hccccHHHHHHhcHHHHHHHHHHHhhCCCC---------------
Q 000529 1097 GVEKIKDGYNPATWMLEVSASSQEV----------ALGVDFCDIYKRSELYRRNKLLIEDLSKPA--------------- 1151 (1441)
Q Consensus 1097 ~~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~--------------- 1151 (1441)
. +||+++|||||++|+++++.+. ....+|++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 3 6999999999999998764311 123579999999998887665554321110
Q ss_pred CCCCCCcccccCCccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHH
Q 000529 1152 PGSKDLHFATQYSQSAFSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTAL 1231 (1441)
Q Consensus 1152 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1231 (1441)
..++.....+.|..|+|+|+++|++|+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234688999999999999999999999999999999999999999999999985 4578999999999999
Q ss_pred HHHhHHhhhhhhhhHHhhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHH
Q 000529 1232 IFLGFEYCISVQPVVFVERMVFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMY 1311 (1441)
Q Consensus 1232 ~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1311 (1441)
++.++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 55668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccccc
Q 000529 1312 FALLFFTLYGMTAVAVTPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDKIE 1391 (1441)
Q Consensus 1312 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~ 1391 (1441)
++.++++++++++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887763
Q ss_pred ----C---------------------C---CcHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000529 1392 ----T---------------------G---ETVKHFLRDYYGFKHSFLGAVAGVLIAFAALFGILFPLGIKQFNF 1438 (1441)
Q Consensus 1392 ----~---------------------g---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1438 (1441)
. | .++.+|+...||++++++|+|++|+++|+++|++++++++++++.
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1 146789988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6.2e-90 Score=928.71 Aligned_cols=591 Identities=23% Similarity=0.396 Sum_probs=499.5
Q ss_pred cCCCceeeEeceEEEEec-------cch----------hh-ccC---CCCCceeeeeceeEEEeCCeEEEEeccCCCChH
Q 000529 838 PFEPYSLTFDEVVYSVDM-------PQQ----------MK-LQG---VPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 896 (1441)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~-------~~~----------~~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKS 896 (1441)
+.+...++|+|+++.... |.- +. ..+ .++.++.+|+|||+.++|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 344567999999887652 110 00 001 112356799999999999999999999999999
Q ss_pred HHHHhhcCCCCC-ceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH-
Q 000529 897 TLMDVLAGRKTG-GYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPE-------VNSETR- 967 (1441)
Q Consensus 897 TLl~~L~g~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~-------~~~~~~- 967 (1441)
||||+|+|+.++ ...+|+|.+||.+..+...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 999999998653 24589999999987544446779999999999999999999999988764221 111111
Q ss_pred -----------------------HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000529 968 -----------------------KMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1441)
Q Consensus 968 -----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTs 1024 (1441)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123578999999999999999998889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcccCCC
Q 000529 1025 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVEKIKD 1103 (1441)
Q Consensus 1025 gLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~~~~~ 1103 (1441)
|||+.++..+++.|+++++ .|+|||+++|||+.+++++||++++|++ |+++|+||. +++.+||+++| . +||+
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~ 438 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPE 438 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCC
Confidence 9999999999999999986 4899999999998889999999999985 899999997 68899999996 3 6999
Q ss_pred CCCccccchhcccchhh-h-----------hccccHHHHHHhcHHHHHHHHHHHhhCCCCCCCCCCcccccCCccHHHHH
Q 000529 1104 GYNPATWMLEVSASSQE-V-----------ALGVDFCDIYKRSELYRRNKLLIEDLSKPAPGSKDLHFATQYSQSAFSQF 1171 (1441)
Q Consensus 1104 ~~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 1171 (1441)
++|||||++|+++.... . ....+|++.|++|+.+++..+.++.........+.....++|..+++.|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 99999999999986432 1 11246899999998887765544321111111111112346889999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHHhhhH
Q 000529 1172 MACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVFVERM 1251 (1441)
Q Consensus 1172 ~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~ 1251 (1441)
+.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+...|++|++++++.+.++.. ++.+..||+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~ 597 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccc
Confidence 9999999999999999999999999999999999999998654445567788999999998888776544 577889999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 000529 1252 VFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAVTPTH 1331 (1441)
Q Consensus 1252 vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~ 1331 (1441)
||+|||++++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+.
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccc---cc-CCC-cHHHHHHhhcCC
Q 000529 1332 HIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDK---IE-TGE-TVKHFLRDYYGF 1406 (1441)
Q Consensus 1332 ~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~---~~-~g~-~~~~~~~~~~g~ 1406 (1441)
.+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|+++|||.+.... |. ... ++.+|+ +.+|+
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~ 756 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDV 756 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCc
Confidence 9999999999999999999999999999999999999999999999999999765432 21 122 455555 78899
Q ss_pred ccc--chhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000529 1407 KHS--FLGAVAGVLIAFAALFGILFPLGIKQFN 1437 (1441)
Q Consensus 1407 ~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1437 (1441)
..+ +.|+++++|++|+++|++++++++++++
T Consensus 757 ~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 757 FTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 754 6699999999999999999999999987
No 9
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-81 Score=785.23 Aligned_cols=583 Identities=31% Similarity=0.495 Sum_probs=492.2
Q ss_pred CCcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeeceEEEEeCCeEEEEEcCCCCcHHH
Q 000529 114 LPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTT 193 (1441)
Q Consensus 114 ~p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKST 193 (1441)
...++++|+|+++++... .+ ..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346789999999997532 11 4578999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhc
Q 000529 194 LLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAA 273 (1441)
Q Consensus 194 LL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1441)
||++|+|+.....+++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+++++-+. +++
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~-------~~~------ 138 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPS-------SLS------ 138 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCC-------CCC------
Confidence 9999999998766789999999988776666789999999999999999999999999987432 112
Q ss_pred CCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000529 274 GIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1441)
Q Consensus 274 ~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsg 353 (1441)
.++.+.+++++++.|||.+|+||++|+...|||||||||||+||..|+.+|+|||+||||||
T Consensus 139 ------------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 139 ------------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 23345689999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHH
Q 000529 354 LDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1441)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 433 (1441)
||+.++.++++.|+++|+. |+|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCch--hhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcCcccccccccccccCcccccchHHHHHHHHHH
Q 000529 434 QEVTSKK--DQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSR 511 (1441)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 511 (1441)
.++.+.. .++.... .......+.++......+............ .........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHH
Confidence 9987743 1110000 000011111110000000000000000000 000001167899999999999
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHHHHHHHHHHHHHHHH-HHHHhhhhchhHHHhh
Q 000529 512 ELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFA-EISMTIVKLPVFYKQR 590 (1441)
Q Consensus 512 ~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~-~~~~~~~~~~vf~kqr 590 (1441)
.+....|++.....|.+|.+.+++++|++|++.+.... ......|++|+.+.+..+..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999998754332 3346788888888888776655 6888999999999999
Q ss_pred hcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 000529 591 DFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTF 670 (1441)
Q Consensus 591 ~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~ 670 (1441)
..++|+.++|++++.+.++|+.++.+++|++++|||+|+.++..+|+.+.++.++..+++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCCCccccC--CCccchhHHhhhcccccccchh
Q 000529 671 GSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFTP--TSTESLGVQVLESREFFAHAYW 748 (1441)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~~ 748 (1441)
++++++.+++++||+++.+.||.||+|+.|+|+.+|++++++.|||.+....|... ..+...|.++++..++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999999744444332 3456678888888887543 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000529 749 YWLGLGALFGFILLLNVGFALALTFLN 775 (1441)
Q Consensus 749 ~w~~~~~l~~~~v~f~i~~~l~L~~~~ 775 (1441)
.|.++.++++++++|.++++++|++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 678999999999999999999998764
No 10
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.5e-83 Score=801.93 Aligned_cols=562 Identities=25% Similarity=0.464 Sum_probs=499.8
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCccCCccccceEEEEeccCCCCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
.+.++|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+....++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3467999999999999999999999999999999999965432 235789999998876444788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000529 946 VYESLFYSAWLRLPPE----VNSETRK-MFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLD 1020 (1441)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++++|++||+...||+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2577899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHHHhCCCcc
Q 000529 1021 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEAIPGVE 1099 (1441)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf~~~~~~~ 1099 (1441)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. +++++||+++|.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~Gf-- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMGF-- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcCc--
Confidence 999999999999999999999864 899999999999999999999999986 899999998 688999999863
Q ss_pred cCCCCCCccccchhcccchhhh-----------hcc-ccHHHHHHhcHHHHHHHHHHHhhCCCCCCCCCCcccccCCccH
Q 000529 1100 KIKDGYNPATWMLEVSASSQEV-----------ALG-VDFCDIYKRSELYRRNKLLIEDLSKPAPGSKDLHFATQYSQSA 1167 (1441)
Q Consensus 1100 ~~~~~~npad~~l~v~~~~~~~-----------~~~-~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1167 (1441)
.||+..++|||+.++++...+. ... .+|++.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 5999999999999999832111 111 5799999999999877644332211122233333456899999
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHhhHHHHHhHHHHHHHHHhHHhhhhhhhhHH
Q 000529 1168 FSQFMACLWKQHWSYWRNPAYTAVRFLFTAFIALLLGSIFWDLGGKTEKRQDLSNAMGSMFTALIFLGFEYCISVQPVVF 1247 (1441)
Q Consensus 1168 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1247 (1441)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..++.+..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999872 5667899999999999999888877665 5667
Q ss_pred hhhHHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000529 1248 VERMVFYREVAAGMFSGIPWALAQIMIEIPYVFVQSLIYSSIVYAMMSFDWTAAKFFWYIFYMYFALLFFTLYGMTAVAV 1327 (1441)
Q Consensus 1248 ~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1327 (1441)
+.|+||+|||...+|++++|.++..+.++|+.++.+++|.+|+||++||.+++++||.|+++++++..++.++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccCHHHHHHHHHHHHHhCCCccccc-CC-------------
Q 000529 1328 TPTHHIASIVSTLFFGLWLLFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLIASQYGDVEDKIE-TG------------- 1393 (1441)
Q Consensus 1328 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~g------------- 1393 (1441)
+|+...|+.++++.+....+++||+||.++||+||+|++|+||+.|++++|+.|||++.+.+|+ .|
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988885 11
Q ss_pred --------C---cHHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000529 1394 --------E---TVKHFLRDYYGFKHSFLGAVAGVLIAFAALFGILFPLGIKQFNF 1438 (1441)
Q Consensus 1394 --------~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1438 (1441)
. .+.+|++..|++++.|.|++++|++||.++|.+++.+++.|+|.
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p 731 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKP 731 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCc
Confidence 1 25678888899999999999999999999999999999999984
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=9.9e-80 Score=779.86 Aligned_cols=609 Identities=21% Similarity=0.350 Sum_probs=470.6
Q ss_pred CCcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeeceEEEEeCCeEEEEEcCCCCcHHH
Q 000529 114 LPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTT 193 (1441)
Q Consensus 114 ~p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKST 193 (1441)
.+.++++|.|+++.+.......+... ....+...-...++..+ ..++++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~-~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETRQ-IQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccccccccccc-CCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999999754210111100 00000000000011111 13467999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhc
Q 000529 194 LLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAA 273 (1441)
Q Consensus 194 LL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1441)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... ..
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LT------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CC------
Confidence 999999998874 3589999999987532 23569999999999999999999999876542100 00
Q ss_pred CCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000529 274 GIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1441)
Q Consensus 274 ~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsg 353 (1441)
.++...+++++++.+||++++||.+|+...++|||||||||+||++|+.+|++|+|||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 11123457889999999999999999988999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHH
Q 000529 354 LDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1441)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 433 (1441)
||+.++.++++.|+++++ .++|+++++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999875 5778888888888789999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC---cccccc-----cccc-cccCcccccchHHH
Q 000529 434 QEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT---PFDKSK-----SHRA-ALTTKVYGVGKREL 504 (1441)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~~~~~~ 504 (1441)
.++++...+.+.....+.+ ...+++.+.|++.. .+...+.... +....+ ..+. ......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998754321100000001 11233334443211 1111111000 000000 0000 00112245689999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHHHHHHHHHHHH-HHHHHHHHhhhhc
Q 000529 505 LKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLF-SGFAEISMTIVKL 583 (1441)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~-~~~~~~~~~~~~~ 583 (1441)
++++++|.++. +|+......|+++.+++|+++|++|++.+ ..+.+...|++||.+++..+ ..+..++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999753 23467778999999877655 5567888888999
Q ss_pred hhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000529 584 PVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRN 663 (1441)
Q Consensus 584 ~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~ 663 (1441)
++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+|+.+++++|+.+++++++...++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCC-----CccccCCCccchhHHhhh
Q 000529 664 LVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS-----WKKFTPTSTESLGVQVLE 738 (1441)
Q Consensus 664 ~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~-----~~~~~~~~~~~~g~~~l~ 738 (1441)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+ +.|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 7999999999999999999999999997654 234321110000111222
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000529 739 SREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLN 775 (1441)
Q Consensus 739 ~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~ 775 (1441)
...+. ....|.++++|++++++|+++++++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22221 234788999999999999999999997654
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.7e-80 Score=785.59 Aligned_cols=570 Identities=25% Similarity=0.401 Sum_probs=481.5
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCC
Q 000529 162 KKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 162 ~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1441)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44678999999999999999999999999999999999998876556899999999886544467899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc-
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM- 320 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1441)
||+|||.|+++++.... .. .++...+++++++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~-------~~------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRR-------VT------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCC-------CC------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999988763210 01 11223457889999999999999999863
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
.+||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999875 5789999999999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
|+++|+|+++++.+||+++|++||++.+|+||+.++++....... ......+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998764322110 0112234556666665544444333221
Q ss_pred cccccc---cccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhh
Q 000529 481 PFDKSK---SHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIY 557 (1441)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 557 (1441)
...++. ..........|..+++.|++.+++|.++..+||+..+..++++.+++++++|++|++.+.+ ..+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHH
Confidence 111100 0001112245678899999999999999999999999999999999999999999976543 2345666
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHH
Q 000529 558 AGALFFTIVMPLFSGF-AEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRF 636 (1441)
Q Consensus 558 ~g~lf~~~~~~~~~~~-~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf 636 (1441)
.|++|+.++...+.++ ..+..+..++++|+|||..++|++++|++++.+.++|+.++.+++|++|+|||+|+.+++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8889999888777764 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhh
Q 000529 637 FKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEF 716 (1441)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1441)
|.++++++++..++.++++++++++++..+|..+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC-ccccCC---CccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000529 717 LGHSW-KKFTPT---STESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLN 775 (1441)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~ 775 (1441)
.+..+ .|...+ .+...|.++++.+++... ++|.++++++++.++|.++++++|++..
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~~ 613 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIRI 613 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98775 443211 123458899998887543 5688999999999999999999998753
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-75 Score=736.30 Aligned_cols=790 Identities=22% Similarity=0.266 Sum_probs=424.7
Q ss_pred CCccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCC
Q 000529 159 PSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD 235 (1441)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1441)
|++ ++.+||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|.++.+++. +.++|.|+|+|
T Consensus 361 PsR-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QeP 436 (1228)
T KOG0055|consen 361 PSR-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEP 436 (1228)
T ss_pred CCC-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeech
Confidence 444 4678999999999999999999999999999999999999998 9999999999988765 46899999999
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1441)
.+| ..||+|||.|+..- ...+...+++ +.++..--+..|++..||.
T Consensus 437 vlF-~~tI~eNI~~G~~d-------------------------at~~~i~~a~--------k~ana~~fi~~lp~g~~T~ 482 (1228)
T KOG0055|consen 437 VLF-ATTIRENIRYGKPD-------------------------ATREEIEEAA--------KAANAHDFILKLPDGYDTL 482 (1228)
T ss_pred hhh-cccHHHHHhcCCCc-------------------------ccHHHHHHHH--------HHccHHHHHHhhHHhhccc
Confidence 665 57999999997421 1111111111 1111222344688899999
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
||+. +-.|||||||||+|||||+.+|+||+||||||+||+.+...+.+.|.+.. .++|+|+ +.|....+-+ +|+|
T Consensus 483 vge~-g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I 557 (1228)
T KOG0055|consen 483 VGER-GVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKI 557 (1228)
T ss_pred ccCC-CCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEE
Confidence 9973 23399999999999999999999999999999999999999999998753 4566666 5566666655 9999
Q ss_pred EEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHH--HhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhh
Q 000529 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL--QEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQK 473 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1441)
++|++|+||+.|+++|+... ..-.++.. |+....++. ..+... ..++.....+.+.....
T Consensus 558 ~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~~-------~~~~~~~s~~~s~~~~~ 619 (1228)
T KOG0055|consen 558 AVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEES-------LKEERSRSLKSSSSSPS 619 (1228)
T ss_pred EEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-cccccc-------hhhhhhhcccccccccc
Confidence 99999999999999999852 11112222 222211110 000000 00000000000000000
Q ss_pred hHh-----hh--cCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHH-------HHHHHHHH
Q 000529 474 LSD-----EL--QTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIG-------SITLVYMT 539 (1441)
Q Consensus 474 ~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~-------~~~li~gt 539 (1441)
... .. ..+.++....+ ........+++ |-+...+.++.+.+.-.+..+ +.+++++.
T Consensus 620 ~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~ 689 (1228)
T KOG0055|consen 620 LSRGSNRSNLLSVKPEGEDPEEP--VSEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQ 689 (1228)
T ss_pred ccCCccccccccccccccccccc--cccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 000 00 00000000000 00000122233 333333333333333322222 22223332
Q ss_pred hhhcccCCC-CccccchhhhHHHHHHHHHHHH--HHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHH
Q 000529 540 LFFRTKMHK-DSVTDGGIYAGALFFTIVMPLF--SGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEP 616 (1441)
Q Consensus 540 ~f~~~~~~~-~~~~~~~~~~g~lf~~~~~~~~--~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~ 616 (1441)
++--..... +..........++|..+....+ +.+......+..-..-.|-|.. +-+.+++.++.+|+-
T Consensus 690 ~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~---------~F~~ll~qd~~wFD~ 760 (1228)
T KOG0055|consen 690 VLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSM---------MFRALLRQEVGWFDD 760 (1228)
T ss_pred HHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHcCCCcccCC
Confidence 221111111 1111111112222222211110 0000000000000000011110 011222222222210
Q ss_pred HHHHHHHhhccCCCCChhHHHHHHH-----HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH------Hhccc
Q 000529 617 AVWVFLSYYVIGYDPNAGRFFKQYL-----LLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLA------LGGFV 685 (1441)
Q Consensus 617 ~i~~~i~Y~~~g~~~~~~rf~~~~l-----~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l------~~Gf~ 685 (1441)
..+.++...++. +--++..-...+...+++++..+.+|..++|-+.++.+. ++++.
T Consensus 761 -------------~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~ 827 (1228)
T KOG0055|consen 761 -------------PENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYL 827 (1228)
T ss_pred -------------CccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011133333331 111222233334444444555555565555544443333 22221
Q ss_pred ccccchhhHHHHHHhHcH---HHHHHHHHHHhhhcCCCCccccCCCccchhHHhhhcccc-----c--ccchhHHHHHHH
Q 000529 686 LSREEVKKWWKWAYWSSP---VMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREF-----F--AHAYWYWLGLGA 755 (1441)
Q Consensus 686 i~~~~ip~~~~W~~~isP---~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~-----~--~~~~~~w~~~~~ 755 (1441)
.. +++.-.+. -.|.-.+-+.+|...+-.... ..+....+++.+.- . ......|.+++.
T Consensus 828 ~~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~----al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f 895 (1228)
T KOG0055|consen 828 QK--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA----ALCAEEKFMELYKEELEKPRKSSFKRGLISGLGF 895 (1228)
T ss_pred HH--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 00000000 011112222222221110000 00001111111000 0 001122333322
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCcccccccccccc-----ccccccCcccccCCCCCCCCCcccCCCCcccccccCCC
Q 000529 756 LFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDE-----QDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHP 830 (1441)
Q Consensus 756 l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1441)
-+...++| +.++++++|...+-.............- ............|+...+..+.......-...+..+..
T Consensus 896 ~~sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~ 974 (1228)
T KOG0055|consen 896 GFSQSLLF-FVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPD 974 (1228)
T ss_pred HHHHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 22222221 2233333333221111111100000000 00000011111111111000000000000000000000
Q ss_pred CCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCce
Q 000529 831 KKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY 910 (1441)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~ 910 (1441)
...+...+.....++|+||+++|+.. ++.++|+|+|++|++|+.+||+|||||||||.+.+|-+..+ +
T Consensus 975 ~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p 1042 (1228)
T KOG0055|consen 975 STSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--P 1042 (1228)
T ss_pred CCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--C
Confidence 01122223334579999999999864 45689999999999999999999999999999999987654 4
Q ss_pred EEEEEEEcCccCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-------CC
Q 000529 911 ITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-------EL 980 (1441)
Q Consensus 911 ~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-------~L 980 (1441)
..|.|.+||.+++. ..+|+++|.|.|+|.++. -|++||+.|+. . +.+.++ +.++++.. +|
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aak~ANaH~FI~sL 1112 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAAKLANAHNFISSL 1112 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHHHHhhhHHHHhcC
Confidence 68999999999865 346789999999999985 69999999981 1 133333 33444433 45
Q ss_pred cccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHH
Q 000529 981 KPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1060 (1441)
Q Consensus 981 ~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~ 1060 (1441)
.+-.|+.+|..|. +||||||||++|||||++||+||||||.||+||+++.+.|+++|.+.. .|||.|+++|++| ..
T Consensus 1113 P~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TI 1188 (1228)
T KOG0055|consen 1113 PQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TI 1188 (1228)
T ss_pred cCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hh
Confidence 5667899998765 599999999999999999999999999999999999999999999875 5899999999986 46
Q ss_pred HhhCeEEEEecCcEEEEEcCC
Q 000529 1061 EAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1061 ~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
+.+|.|.|+++ |++++.|+-
T Consensus 1189 qnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1189 QNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred hcCCEEEEEEC-CEEEecccH
Confidence 88999999985 899999985
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.9e-73 Score=731.12 Aligned_cols=775 Identities=22% Similarity=0.257 Sum_probs=457.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
.+.|+|||+.|++|++++|+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|++ |+.+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-WI~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-WIQNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-HhhCCcHH
Confidence 34899999999999999999999999999999999999876 99999999 599999987 55678999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
|||.|+..+. ..||+.+.++|.+++|.+++|++| .|.||+ .+-.|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGE-rGinL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGE-RGINL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecC-CccCC
Confidence 9999998775 378999999999999999999998 499997 44459
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~-~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
||||||||++|||++++++|++||+|.|++|+++..+|++ +++.+ .+++++|.++| .-+..+.+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~---L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGL---LRGKTVILVTH-QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhh---hcCCEEEEEeC-chhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999994 67553 23445555666 5678889999999999999
Q ss_pred EEEcCHHHHHH---HHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 404 VYQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 404 v~~G~~~~~~~---~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
+..|+++|+.+ .|+++ +.+....++.+ ...+.+.......+. +. +.........+. ..
T Consensus 721 ~~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~ 781 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-SK 781 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhcccccc-cc
Confidence 99999999983 23322 00000000000 000000000000000 00 000000000000 00
Q ss_pred cccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHH-HHHHHHHHHH-H---HHHhhhcccCCCC------
Q 000529 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIF-KLIQIGSITL-V---YMTLFFRTKMHKD------ 549 (1441)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~-~~~~~~~~~l-i---~gt~f~~~~~~~~------ 549 (1441)
.................+.-.|...+. +...........+ -+.......+ + ++.-+| ++....
T Consensus 782 ~~~~~~~~~~~~ee~~~G~v~~~vY~~-----Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W-~~~~~~~~~~~~ 855 (1381)
T KOG0054|consen 782 DEKEEEDKLVQEEERETGKVSWSVYKK-----YIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYW-TDDGEDNGTTTV 855 (1381)
T ss_pred cccchhhHHHHHHHHhcCEeeHHHHHH-----HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccccccCC
Confidence 000000000000000011111111111 1100001111110 1111111111 1 122222 221111
Q ss_pred -ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccC
Q 000529 550 -SVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIG 628 (1441)
Q Consensus 550 -~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g 628 (1441)
.......|..+.+...+..++.++....+.+.....++.+ +-+.+++.|++||++
T Consensus 856 ~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~------------ml~~Ilrapm~FFdt------------ 911 (1381)
T KOG0054|consen 856 STSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDK------------LLNSILRAPMSFFDT------------ 911 (1381)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHhCcchhcCC------------
Confidence 1112223333333333444444444433444333333333 556788999999875
Q ss_pred CCCChhHHHHHH---------HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhc---c-cccccchhhHH
Q 000529 629 YDPNAGRFFKQY---------LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGG---F-VLSREEVKKWW 695 (1441)
Q Consensus 629 ~~~~~~rf~~~~---------l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~G---f-~i~~~~ip~~~ 695 (1441)
...||.++++ .+.+.+..+...+..+++.++-...+...+..+++.+.+++.. | .-...++++.-
T Consensus 912 --TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLe 989 (1381)
T KOG0054|consen 912 --TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLE 989 (1381)
T ss_pred --CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 3467777766 4666666666666666666654444443333333333333221 1 11222222211
Q ss_pred HHHHhHcHHHHHHHHHHHhhhcCCCCccccCCCccchhHHhhhc-----c---cccccchhHHHHHHHHHHHHHHHHHHH
Q 000529 696 KWAYWSSPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLES-----R---EFFAHAYWYWLGLGALFGFILLLNVGF 767 (1441)
Q Consensus 696 ~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~-----~---~~~~~~~~~w~~~~~l~~~~v~f~i~~ 767 (1441)
. .-.||++-.+...+..--.-+.|.... ..-...... + -+.....|+.+.+-.+..+++++..++
T Consensus 990 s--itRSPi~sh~~Etl~GlsTIRAf~~~~-----rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~ 1062 (1381)
T KOG0054|consen 990 S--ITRSPIYSHFSETLQGLSTIRAFGKEE-----RFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALF 1062 (1381)
T ss_pred h--cccchHHHhHHHHhcCcceeeeccccH-----HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 114677666555544333333332210 000000000 0 011123344444443333333332222
Q ss_pred HHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCC---CccccCCCcee
Q 000529 768 ALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKR---GMVLPFEPYSL 844 (1441)
Q Consensus 768 ~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 844 (1441)
++...-. . ..+..+..--.+.........+.++...+.|..+.+.+|..++...+.++++.... ....|. ...+
T Consensus 1063 ~vl~~~~-~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~-~G~I 1139 (1381)
T KOG0054|consen 1063 AVLLPSG-L-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPS-KGEI 1139 (1381)
T ss_pred HHHccCC-C-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCC-CCeE
Confidence 2221110 0 00110000000000000000112222233333344444443332212221111111 111221 2379
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+|+|++.+|.. +-..+|||||++|+|||.+||+|++|||||||+++|.+... +.+|+|.|||.++.+
T Consensus 1140 ~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~ 1206 (1381)
T KOG0054|consen 1140 EFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISK 1206 (1381)
T ss_pred EEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeeccc
Confidence 99998877642 23469999999999999999999999999999999998765 357999999999865
Q ss_pred ---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCC
Q 000529 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS-------LVGLPGVN 994 (1441)
Q Consensus 925 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~~~ 994 (1441)
.+.|++++.+||||.++. -|+|.|| |+..+..++.++++||..+|.+...+ .+.+ +..
T Consensus 1207 igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~e-gG~ 1274 (1381)
T KOG0054|consen 1207 IGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSE-GGE 1274 (1381)
T ss_pred ccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecC-CCc
Confidence 457889999999999886 4888876 44555667779999999998765433 3332 456
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+-.+ ++|||++.|+.+. + -.+|||+||++ |+
T Consensus 1275 N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~ 1350 (1381)
T KOG0054|consen 1275 NFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GR 1350 (1381)
T ss_pred cCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch-h-hhcCeEEEeeC-Ce
Confidence 7999999999999999999999999999999999999999999999775 7999999999873 4 45899999986 89
Q ss_pred EEEEcCCC
Q 000529 1075 EVYVGPLG 1082 (1441)
Q Consensus 1075 ~v~~G~~~ 1082 (1441)
++++|++.
T Consensus 1351 v~EfdsP~ 1358 (1381)
T KOG0054|consen 1351 VVEFDSPA 1358 (1381)
T ss_pred EeecCChH
Confidence 99999983
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.1e-70 Score=737.17 Aligned_cols=804 Identities=20% Similarity=0.280 Sum_probs=487.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 943 k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~Pt---sG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 943 RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT---SGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCC---ceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 56999999999999999999999999999999999999998 999999999985321 2467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+|||.|.++.++... ++.+..++++++.+||++..|+.+++
T Consensus 1020 V~E~L~f~~~lkg~~~----------------------------------~~~~~~v~~lL~~vgL~~~~~~~~~~---- 1061 (2272)
T TIGR01257 1020 VAEHILFYAQLKGRSW----------------------------------EEAQLEMEAMLEDTGLHHKRNEEAQD---- 1061 (2272)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCChhh----
Confidence 9999999877654210 01123467789999999999988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+++|++++|||||+|||+.++..+++.|+++. . +++|+.++|+.+++..++|||++|++|+
T Consensus 1062 -LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~--~-g~TIIltTHdmdea~~laDrI~iL~~Gk 1137 (2272)
T TIGR01257 1062 -LSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR--S-GRTIIMSTHHMDEADLLGDRIAIISQGR 1137 (2272)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--C-CCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999872 3 5667778999999999999999999999
Q ss_pred EEEEcCHHHHHHHHHhcCCC-------------------------------CCCCC-----------C---hhhHHHhhc
Q 000529 403 IVYQGPRELVLEFFESMGFK-------------------------------CPKRK-----------G---VADFLQEVT 437 (1441)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~-------------------------------~p~~~-----------~---~adfl~~v~ 437 (1441)
+++.|+++++.+.|. .||. ||... + +.++++...
T Consensus 1138 L~~~Gs~~~Lk~~~g-~gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~i 1216 (2272)
T TIGR01257 1138 LYCSGTPLFLKNCFG-TGFYLTLVRKMKNIQSQRGGCEGTCSCTSKGFSTRCPARVDEITPEQVLDGDVNELMDLVYHHV 1216 (2272)
T ss_pred EEEecCHHHHHHhcC-CcEEEEEEecccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHhC
Confidence 999999999987653 2431 11000 0 111222111
Q ss_pred Cchhhhhhh---hccCCCCcccCHHHHHHHHHhchhh------------h--------hhHhhhcC--------------
Q 000529 438 SKKDQEQYW---AHKDRPYRFVKVQEFVAAFQSFHVG------------Q--------KLSDELQT-------------- 480 (1441)
Q Consensus 438 s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------------~--------~~~~~~~~-------------- 480 (1441)
......+.. ..-..|........|...|+.-+.. . ++.++...
T Consensus 1217 P~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~~~lgi~sygis~tTLEeVFlkv~~~~~~~~~~~~~~~~~~~~ 1296 (2272)
T TIGR01257 1217 PEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDADSGSLFAGGAQQKREN 1296 (2272)
T ss_pred CCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhHhhCCCceEEeecCCHHHHHHHhhhhccccccccccccccccc
Confidence 000000000 0000011111111233333221100 0 00000000
Q ss_pred ---------ccccccc-cc-------c--------------cccC---cccccchHHHHHHHHHHHHHHhhcchHHHHHH
Q 000529 481 ---------PFDKSKS-HR-------A--------------ALTT---KVYGVGKRELLKACTSRELLLMKRNSFVYIFK 526 (1441)
Q Consensus 481 ---------~~~~~~~-~~-------~--------------~~~~---~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~ 526 (1441)
+.++... .. . .... ..-..-++.|+++++.+.++..+|++....+.
T Consensus 1297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~L~~qQf~All~KR~~~~~Rd~k~~~~q 1376 (2272)
T TIGR01257 1297 ANLRHPCSGPTEKAGQTPQASHTCSPGQPAAHPEGQPPPEPEDPGVPLNTGARLILQHVQALLVKRFQHTIRSHKDFLAQ 1376 (2272)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 0000000 00 0 0000 00001256789999999999999999887766
Q ss_pred HHHHHHH---HHHHHHh----------------h------hccc------------------------------------
Q 000529 527 LIQIGSI---TLVYMTL----------------F------FRTK------------------------------------ 545 (1441)
Q Consensus 527 ~~~~~~~---~li~gt~----------------f------~~~~------------------------------------ 545 (1441)
++.-+++ ++++..+ | +...
T Consensus 1377 illPi~fv~lal~~~~~~~~~~~~p~l~Ls~~~Y~~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1456 (2272)
T TIGR01257 1377 IVLPATFVFLALMLSIIIPPFGEYPALTLHPWMYGQQYTFFSMDEPNSEHLEVLADVLLNKPGFGNRCLKEEWLPEYPCG 1456 (2272)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCeecchhhccCcceeccccccccccccchhhhhhccccccccccccccccccccc
Confidence 5543322 2221111 0 0000
Q ss_pred C------C----------------------------------------------C--------C---ccc--cc------
Q 000529 546 M------H----------------------------------------------K--------D---SVT--DG------ 554 (1441)
Q Consensus 546 ~------~----------------------------------------------~--------~---~~~--~~------ 554 (1441)
. + + + ... +.
T Consensus 1457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~n~sdyll~ 1536 (2272)
T TIGR01257 1457 NSTPWKTPSVSPNITHLFQKQKWTAAHPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTDRNISDFLVK 1536 (2272)
T ss_pred ccccccccchhHHHHHHHhhccccccccccccccccccccccccccccccccCCCcccccccchhhhhhcccchHHHHhh
Confidence 0 0 0 0 000 00
Q ss_pred ------------------hhh-------------------hHH-------------------------------------
Q 000529 555 ------------------GIY-------------------AGA------------------------------------- 560 (1441)
Q Consensus 555 ------------------~~~-------------------~g~------------------------------------- 560 (1441)
..| .++
T Consensus 1537 ~~~~~~~~~~~~~~~~~~~ry~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1616 (2272)
T TIGR01257 1537 TYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPITGEALVGFLSDLGQMMNVSGGPVTREASKEMPDFLKHLETEDNIK 1616 (2272)
T ss_pred hhhhhhccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccccccchhhhhhhccccCcceE
Confidence 000 000
Q ss_pred ------------HHHHHHHHHH-------------------------------------------------HHHHHHHHh
Q 000529 561 ------------LFFTIVMPLF-------------------------------------------------SGFAEISMT 579 (1441)
Q Consensus 561 ------------lf~~~~~~~~-------------------------------------------------~~~~~~~~~ 579 (1441)
++..++..++ .+++.++..
T Consensus 1617 vwfNn~~~Hs~p~~lN~l~NaiLr~~~~~~~~~~~~~I~v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~as 1696 (2272)
T TIGR01257 1617 VWFNNKGWHALVSFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPAS 1696 (2272)
T ss_pred EEEcCCcccHHHHHHHHHHHHHHHHhcccccCCccceEEEEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Confidence 0000000000 001111111
Q ss_pred hhhchhHHHhhhcC-----C---cChhhHHHHHHHHHhhHHHHHHHHHHHHHhhc--cCCCCChhHHHHHHHHHHHHHHH
Q 000529 580 IVKLPVFYKQRDFK-----F---FPPWAYAIPSWILKIPISFLEPAVWVFLSYYV--IGYDPNAGRFFKQYLLLLAFNQM 649 (1441)
Q Consensus 580 ~~~~~vf~kqr~~~-----~---y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~--~g~~~~~~rf~~~~l~~~~~~~~ 649 (1441)
+.-.+| +||..+ + .++.+|+++.++.++...++..++..++++.. -++. +...+...++++++...+
T Consensus 1697 fv~~~V--~ER~skaK~lQ~vSGv~~~~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~-~~~~l~~~~lll~lyG~a 1773 (2272)
T TIGR01257 1697 FVLYLI--QERVNKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYT-SPENLPALVALLMLYGWA 1773 (2272)
T ss_pred Hheeee--hHHhhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhc-CcchHHHHHHHHHHHHHH
Confidence 111111 222211 1 26789999999999888777766655444322 1222 223444455566666777
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHH---HHHHHHhcccc----c---ccchhhHHHHHHhHcHHHHHHHHHH---Hhhh
Q 000529 650 ISGLFRFLGAIGRNLVVAYTFGSFAV---LVLLALGGFVL----S---REEVKKWWKWAYWSSPVMYAQNGIL---ANEF 716 (1441)
Q Consensus 650 ~~~l~~~i~a~~~~~~vA~~~~~~~~---l~~~l~~Gf~i----~---~~~ip~~~~W~~~isP~~y~~~al~---~nef 716 (1441)
+..+.++++-++.+...|+....++. .+...+..|++ + ...+...+.|++.+.|..---+++. .++.
T Consensus 1774 ~ip~tYl~SflF~~~~~A~~~~~~in~~~G~~~~i~~~il~~~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~ 1853 (2272)
T TIGR01257 1774 VIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQA 1853 (2272)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHH
Confidence 77777777777666555543322111 11111111211 1 1223457788888888654444433 1211
Q ss_pred cCCCCccccCCCccchhHHhhhcccccccchhHHHHHH----HHHHHHHH-HHHHHHHHHHhccccCCCccccccccccc
Q 000529 717 LGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLG----ALFGFILL-LNVGFALALTFLNQFEKPRAVITEEFESD 791 (1441)
Q Consensus 717 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~----~l~~~~v~-f~i~~~l~L~~~~~~~~~~~~~~~~~~~~ 791 (1441)
....+.. .+.. .....|-|-..| +++...++ |.++..+-..+... ....... .
T Consensus 1854 ~~~~~~~--------~~~~-------~~~~~~~~~~~g~~ll~m~~~~iv~flLl~~ie~~~~~~----~~~~~~~--~- 1911 (2272)
T TIGR01257 1854 VTDVYAQ--------FGEE-------HSANPFQWDLIGKNLVAMAVEGVVYFLLTLLIQHHFFLS----RWIAEPA--K- 1911 (2272)
T ss_pred HHHHHHh--------hccc-------ccCCccchhhccHHHHHHHHHHHHHHHHHHHHHhhhhhh----hhccccC--c-
Confidence 1000000 0000 001122222221 11111111 11111111111100 0000000 0
Q ss_pred cccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceee
Q 000529 792 EQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVL 871 (1441)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 871 (1441)
. + .... ..+ ...+...-. .. ......+.++|+++.++. +++.+
T Consensus 1912 -------~-----~----~~~e-----D~D-V~~Er~rV~-~~---~~~~~~L~v~nLsK~Y~~-----------~~~~a 1954 (2272)
T TIGR01257 1912 -------E-----P----IFDE-----DDD-VAEERQRII-SG---GNKTDILRLNELTKVYSG-----------TSSPA 1954 (2272)
T ss_pred -------C-----c----CCCc-----hhH-HHHHHHHHh-cc---CCCCceEEEEEEEEEECC-----------CCceE
Confidence 0 0 0000 000 000000000 00 001124788999877631 12579
Q ss_pred eeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc--cccceEEEEeccCCCCCCCCCHHHH
Q 000529 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVTVYES 949 (1441)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~ 949 (1441)
|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+|||+|++.+++.+||+|+
T Consensus 1955 L~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~ 2032 (2272)
T TIGR01257 1955 VDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREH 2032 (2272)
T ss_pred EEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCHHHH
Confidence 9999999999999999999999999999999998763 47999999988642 2245679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000529 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1441)
Q Consensus 950 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~ 1029 (1441)
+.+.+.++. .+.++.++.++++++.++|.+..|+.++ .|||||||||+||+||+.+|+||||||||+|||+.
T Consensus 2033 L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGLDp~ 2104 (2272)
T TIGR01257 2033 LYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQ 2104 (2272)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHH
Confidence 998776653 2334445678899999999998888765 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCcchhHHHHH
Q 000529 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYF 1092 (1441)
Q Consensus 1030 ~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yf 1092 (1441)
+++.+++.|++++++|+|||+|||+++ ++..+|||+++|.+ |+++..|+. +++..-|
T Consensus 2105 sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~----q~Lk~~~ 2161 (2272)
T TIGR01257 2105 ARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTI----QHLKSKF 2161 (2272)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH----HHHHHHh
Confidence 999999999999878999999999986 67788999999985 899999987 4454444
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.7e-68 Score=725.16 Aligned_cols=211 Identities=24% Similarity=0.321 Sum_probs=177.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+||+++|+. +..++|+|||++|+|||.+||+|+||||||||+++|.|...+ .+|+|.+||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEec
Confidence 6999999998842 123699999999999999999999999999999999998663 479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
.+ ..+|+.+++|||++.++.. |++|||.+.. .. .++.++++++..++.+. .|+.+|..|
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G 1372 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEAG 1372 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCCC
Confidence 64 4567889999999999875 9999996431 11 23446778888777543 355666543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1373 -~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~- 1447 (1622)
T PLN03130 1373 -ENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA- 1447 (1622)
T ss_pred -CCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999985 4899999999986 4567999999985
Q ss_pred cEEEEEcCCC
Q 000529 1073 GREVYVGPLG 1082 (1441)
Q Consensus 1073 G~~v~~G~~~ 1082 (1441)
|++++.|++.
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 8999999874
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-67 Score=718.82 Aligned_cols=210 Identities=22% Similarity=0.291 Sum_probs=177.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+||+++++. +.+++|+|||++|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEEh
Confidence 5999999998842 224699999999999999999999999999999999998663 479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
.+ ..+|+.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..|
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 54 4567889999999999874 9999996421 122 3346778888877653 355566543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1370 -~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1370 -ENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 4899999999985 4567999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999986
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=9.9e-66 Score=611.71 Aligned_cols=474 Identities=27% Similarity=0.344 Sum_probs=363.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcceEEEECCeeCCCCCc-------cceEEEEcCCC-
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS-LKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1441)
.++++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999886 4568999999998755433 26799999996
Q ss_pred -CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccc
Q 000529 236 -NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1441)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1441)
.+-|-+||.+.|.-..+..+... .++...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 45677899999887665543211 22334567789999999987765
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
+.+.+.|||||||||.||+||+.+|++|++|||||+||..++.+|++.|+++.+ ..++.++.++|+..-+.++|||
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCe
Confidence 345566999999999999999999999999999999999999999999999875 5678888999999999999999
Q ss_pred EEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhh
Q 000529 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKL 474 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1441)
|+||.+|++|+.|+++++.+. |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999998641 11 01100 00
Q ss_pred HhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 000529 475 SDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDG 554 (1441)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~ 554 (1441)
.+. .|. ....
T Consensus 255 l~a--~p~---------------------------------------------------------------~~~~----- 264 (539)
T COG1123 255 LAA--VPR---------------------------------------------------------------LGDE----- 264 (539)
T ss_pred Hhh--CCC---------------------------------------------------------------cccc-----
Confidence 000 000 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChh
Q 000529 555 GIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAG 634 (1441)
Q Consensus 555 ~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1441)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHh
Q 000529 635 RFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILAN 714 (1441)
Q Consensus 635 rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~n 714 (1441)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 000529 715 EFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQD 794 (1441)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~ 794 (1441)
...
T Consensus 265 -------~~~---------------------------------------------------------------------- 267 (539)
T COG1123 265 -------KII---------------------------------------------------------------------- 267 (539)
T ss_pred -------ccc----------------------------------------------------------------------
Confidence 000
Q ss_pred ccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeec
Q 000529 795 NRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNG 874 (1441)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 874 (1441)
. ... . .. .+ ...-++++|++..+..+.... +...+...+++|
T Consensus 268 ----~------------~~~-----~------~~--------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~ 309 (539)
T COG1123 268 ----R------------LPR-----R------GP--------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDD 309 (539)
T ss_pred ----c------------ccc-----c------cc--------cc-cCceeEeeeeeeeeccccccc--cccccceeeeee
Confidence 0 000 0 00 00 001244455544443322110 000134579999
Q ss_pred eeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC--Cc---cccceEEEEeccCC--CCCCCCCHH
Q 000529 875 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK--KQ---ETFARISGYCEQND--IHSPFVTVY 947 (1441)
Q Consensus 875 vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~Q~~--~~~~~lTv~ 947 (1441)
|||++++||++||+|+||||||||.++|+|...+ ..|.|.++|.+. +. ...++.+-+++|++ .+.|.+||+
T Consensus 310 VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~ 387 (539)
T COG1123 310 VSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVG 387 (539)
T ss_pred eeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHH
Confidence 9999999999999999999999999999998764 479999999762 11 22445667777765 467999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 948 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
+.+.-....... ....++++++.++++.+||.+ ..+++ +.+||||||||++|||||+.+|++|++|||||.|
T Consensus 388 ~~i~epL~~~~~--~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaL 460 (539)
T COG1123 388 DILAEPLRIHGG--GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSAL 460 (539)
T ss_pred HHHHhHHhhhcc--cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCcccc
Confidence 999766554432 225666778999999999986 45555 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|+..+..|.++|+++.++ |.|.|++|||.+. +...|||+++|.+ |++|..||.
T Consensus 461 Dvsvqa~VlnLl~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 461 DVSVQAQVLNLLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred CHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999999999866 9999999999874 7788999999985 899999975
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.6e-65 Score=693.91 Aligned_cols=216 Identities=19% Similarity=0.309 Sum_probs=178.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-------------
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------- 909 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------------- 909 (1441)
.++|+||+|+|+.. ++.++|+|+||+|+||+.+||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 69999999998531 2346999999999999999999999999999999999975531
Q ss_pred ---------------------------------------eEEEEEEEcCccCCc---cccceEEEEeccCCCCCCCCCHH
Q 000529 910 ---------------------------------------YITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 947 (1441)
Q Consensus 910 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 947 (1441)
+.+|+|.+||.++.+ ..+++.+|||+|++.+++ .|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHH
Confidence 147999999998754 456888999999999885 7999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000529 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-------LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1441)
Q Consensus 948 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLD 1020 (1441)
||+.|+. + +.+. +.++++++..++.+ -.|+.+|..| ..||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998862 1 2232 33666777766544 3477888644 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHhhCeEEEEecC---cE-EEEEcCC
Q 000529 1021 EPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GR-EVYVGPL 1081 (1441)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~i~~~~D~vllL~~g---G~-~v~~G~~ 1081 (1441)
||||+||+++.+.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 35899999999975 56789999999863 67 4578875
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.6e-65 Score=704.29 Aligned_cols=210 Identities=19% Similarity=0.240 Sum_probs=177.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+||+++++. +...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.+||.++
T Consensus 1284 ~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEEc
Confidence 6999999998853 12359999999999999999999999999999999999765 3479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
.+ ..+|+.++||||++.+++. |++|||... .+.+ ++.++++++..++.+. .|+.+|..|
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYS----DEEVWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 64 4567889999999999975 999999521 0122 3347788888887653 355666533
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1420 -~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~- 1494 (1522)
T TIGR00957 1420 -ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK- 1494 (1522)
T ss_pred -CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 4799999999975 4667999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 1495 G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 GEVAEFGAP 1503 (1522)
T ss_pred CEEEEECCH
Confidence 899999986
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-64 Score=629.07 Aligned_cols=458 Identities=22% Similarity=0.310 Sum_probs=350.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 3699999999999999999999999999999999999986 5 8999999998865432 35699999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++......+. . ...+....++++++.+||++..++.+++
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~-------~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 143 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGI-------M------------------------DYDAMYLRAQKLLAQLKLDINPATPVGN 143 (506)
T ss_pred CCCcHHHHhhhcccccccCC-------c------------------------CHHHHHHHHHHHHHHcCCCCCcccchhh
Confidence 99999999998653211000 0 0001123467789999999888888876
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|++++|+..++.++||+|++|
T Consensus 144 -----LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l 216 (506)
T PRK13549 144 -----LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVI 216 (506)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 566777899999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhh
Q 000529 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDEL 478 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1441)
++|++++.|+.+++.. .+..+
T Consensus 217 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 237 (506)
T PRK13549 217 RDGRHIGTRPAAGMTE--------------------------------------------DDIIT--------------- 237 (506)
T ss_pred ECCEEeeecccccCCH--------------------------------------------HHHHH---------------
Confidence 9999998876432200 00000
Q ss_pred cCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhh
Q 000529 479 QTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYA 558 (1441)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~ 558 (1441)
+ +. + .. .
T Consensus 238 --------------------------------~-----------------------------~~--~--~~-~------- 244 (506)
T PRK13549 238 --------------------------------M-----------------------------MV--G--RE-L------- 244 (506)
T ss_pred --------------------------------H-----------------------------hh--C--cC-c-------
Confidence 0 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHH
Q 000529 559 GALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFK 638 (1441)
Q Consensus 559 g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~ 638 (1441)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcC
Q 000529 639 QYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLG 718 (1441)
Q Consensus 639 ~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~ 718 (1441)
+
T Consensus 245 -----------------------------------------------------~-------------------------- 245 (506)
T PRK13549 245 -----------------------------------------------------T-------------------------- 245 (506)
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred CCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccc
Q 000529 719 HSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIG 798 (1441)
Q Consensus 719 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1441)
. . . + .
T Consensus 246 ----~------------------~-------------------------------~-~--~------------------- 250 (506)
T PRK13549 246 ----A------------------L-------------------------------Y-P--R------------------- 250 (506)
T ss_pred ----c------------------c-------------------------------c-c--c-------------------
Confidence 0 0 0 0 0
Q ss_pred CcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEE
Q 000529 799 GTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGA 878 (1441)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 878 (1441)
. . . .. + .+ .++++|+++.++. .+++.+|+||||+
T Consensus 251 ~------------~-------~---------~~--~-----~~-~l~~~~l~~~~~~----------~~~~~vl~~vsl~ 284 (506)
T PRK13549 251 E------------P-------H---------TI--G-----EV-ILEVRNLTAWDPV----------NPHIKRVDDVSFS 284 (506)
T ss_pred c------------c-------c---------CC--C-----Cc-eEEEecCcccccc----------ccccccccceeeE
Confidence 0 0 0 00 0 00 2455665544310 0124589999999
Q ss_pred EeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCC---CCCCCCCHHHHHH
Q 000529 879 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLF 951 (1441)
Q Consensus 879 i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~ 951 (1441)
|++||++||+||||||||||+++|+|..++ +.+|+|.++|.++... ..++.++|++|++ .+++.+||.|++.
T Consensus 285 i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~ 363 (506)
T PRK13549 285 LRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNIT 363 (506)
T ss_pred EcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhh
Confidence 999999999999999999999999997641 1379999999875321 1244689999985 4678899999998
Q ss_pred HHHHhcCC--CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000529 952 YSAWLRLP--PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1441)
Q Consensus 952 f~~~lr~~--~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~ 1028 (1441)
+....... .....+..++.++++++.+++. +..++.++ .|||||||||+||+||+.+|+||+|||||+|||+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~ 438 (506)
T PRK13549 364 LAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDV 438 (506)
T ss_pred hhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCH
Confidence 75321111 0012233445688999999996 46677654 5999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1029 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
.++..+++.|++++++|+|||++|||++ ++.+.||++++|++ |+++..|+..+
T Consensus 439 ~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 439 GAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 9999999999999888999999999986 57788999999985 89999988754
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-63 Score=635.46 Aligned_cols=488 Identities=22% Similarity=0.262 Sum_probs=355.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCC----------CC------c-cce
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE----------FV------P-ERT 227 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~----------~~------~-~~~ 227 (1441)
.++|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|..+.. .. . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 9999999974411 11 1 236
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHHhHhc-CCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHH
Q 000529 228 AAYISQHD--NHIGEMTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLK 304 (1441)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1441)
++||+|++ .+++.+||+||+.++.+.. +.. ..+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999987 5788899999999986532 110 0112234677899
Q ss_pred HcCCcc---ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEE
Q 000529 305 VLGLDI---CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISL 381 (1441)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i 381 (1441)
.+||++ ..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+ ..+++|+.+
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~-~~g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQK-EMSMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHH-hcCCEEEEE
Confidence 999964 45666665 999999999999999999999999999999999999999999999864 335667889
Q ss_pred ecChhhHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHH
Q 000529 382 LQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEF 461 (1441)
Q Consensus 382 ~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1441)
+|+..++.++||+|++|++|++++.|+++++.+ .|.+ ++. ..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~-------------------------~~~----~~l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQH-------------------------PYT----RAL 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCC-------------------------hhh----hhh
Confidence 999999999999999999999999998876531 0000 000 000
Q ss_pred HHHHHhchhhhhhHhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhh
Q 000529 462 VAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLF 541 (1441)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f 541 (1441)
.+. .|
T Consensus 269 ~~~---------------~~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAA---------------VP------------------------------------------------------------ 273 (623)
T ss_pred hhc---------------cC------------------------------------------------------------
Confidence 000 00
Q ss_pred hcccCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHH
Q 000529 542 FRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVF 621 (1441)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1441)
.... ..
T Consensus 274 ---~~~~--~~--------------------------------------------------------------------- 279 (623)
T PRK10261 274 ---QLGA--MK--------------------------------------------------------------------- 279 (623)
T ss_pred ---cccc--cc---------------------------------------------------------------------
Confidence 0000 00
Q ss_pred HHhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhH
Q 000529 622 LSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWS 701 (1441)
Q Consensus 622 i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~i 701 (1441)
T Consensus 280 -------------------------------------------------------------------------------- 279 (623)
T PRK10261 280 -------------------------------------------------------------------------------- 279 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHhhhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 000529 702 SPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPR 781 (1441)
Q Consensus 702 sP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~ 781 (1441)
+.......+. . .
T Consensus 280 ----------------~~~~~~~~~~----~----------------------------------------------~-- 291 (623)
T PRK10261 280 ----------------GLDYPRRFPL----I----------------------------------------------S-- 291 (623)
T ss_pred ----------------cccCCccccc----c----------------------------------------------c--
Confidence 0000000000 0 0
Q ss_pred cccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhc
Q 000529 782 AVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKL 861 (1441)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (1441)
. . .... . ... . .. .....+ . .-++++|+++.++..... .
T Consensus 292 --------~-~-~~~~-~------------~~~-----~---~~---~~~~~~-----~-~~L~~~~l~~~y~~~~~~-~ 330 (623)
T PRK10261 292 --------L-E-HPAK-Q------------EPP-----I---EQ---DTVVDG-----E-PILQVRNLVTRFPLRSGL-L 330 (623)
T ss_pred --------c-c-cccc-c------------Ccc-----c---cc---ccccCC-----C-ceEEEeeeEEEEcCCCcc-c
Confidence 0 0 0000 0 000 0 00 000000 0 137788888776421000 0
Q ss_pred cCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc------ccceEEEEec
Q 000529 862 QGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------TFARISGYCE 935 (1441)
Q Consensus 862 ~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~ 935 (1441)
.. ..+.+.+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++... .+++.++|++
T Consensus 331 ~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~ 407 (623)
T PRK10261 331 NR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIF 407 (623)
T ss_pred cc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEe
Confidence 00 00124699999999999999999999999999999999998653 479999999875321 2356799999
Q ss_pred cCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhh
Q 000529 936 QND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVA 1012 (1441)
Q Consensus 936 Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~ 1012 (1441)
|++ .+++.+||.|++.+....+. ....++.++++.++++.+||. +..++.+ ..|||||||||+|||||+.
T Consensus 408 Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~ 480 (623)
T PRK10261 408 QDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALAL 480 (623)
T ss_pred cCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhc
Confidence 997 47888999999987654321 112334456788999999996 4566664 4699999999999999999
Q ss_pred CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1013 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1013 ~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
+|+||||||||+|||+.++..++++|++++++ |.|||++|||++ .+.+.+|++++|++ |++++.|+..
T Consensus 481 ~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 481 NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999999765 899999999986 57788999999985 8999999863
No 23
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8e-64 Score=685.08 Aligned_cols=211 Identities=24% Similarity=0.286 Sum_probs=178.1
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..+.|+||+++|+. +...+|+||||+|+|||.+||+|+||||||||+++|.|... +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 36999999998842 22359999999999999999999999999999999999876 347999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 991 (1441)
+.. ..+++.++||||++.++.. |++|||... .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4578899999999999874 999999421 1122 3457888988888654 35666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 992 GVNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~-p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
| .+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 G-~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 G-SNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred c-CcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 3 46999999999999999996 89999999999999999999999999875 4799999999975 567899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 24
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.5e-64 Score=624.99 Aligned_cols=450 Identities=20% Similarity=0.320 Sum_probs=348.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999998 9999999998754322 3469999999888999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++...... +. .. ...+....++++++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~---~~---~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNR---FG---RI------------------------DWKKMYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccc---cC---cc------------------------CHHHHHHHHHHHHHHcCCCCCccCchhh--
Confidence 9999999986432100 00 00 0001123467789999999888888877
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.++||+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998753 3 56677789999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
|+++..|+.+++.. ++..+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHH----------------
Confidence 99998775432100 000000
Q ss_pred cccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHH
Q 000529 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1441)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1441)
++ . .
T Consensus 237 ------------------------------------------------------------~~--~--~------------ 240 (501)
T PRK10762 237 ------------------------------------------------------------MV--G--R------------ 240 (501)
T ss_pred ------------------------------------------------------------hc--C--C------------
Confidence 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHH
Q 000529 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1441)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1441)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCC
Q 000529 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1441)
Q Consensus 641 l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~ 720 (1441)
.
T Consensus 241 -------------------------------------------------------------------------------~ 241 (501)
T PRK10762 241 -------------------------------------------------------------------------------K 241 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 000529 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1441)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1441)
..... +
T Consensus 242 ~~~~~--------------------------------------------------~------------------------ 247 (501)
T PRK10762 242 LEDQY--------------------------------------------------P------------------------ 247 (501)
T ss_pred ccccc--------------------------------------------------c------------------------
Confidence 00000 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEe
Q 000529 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1441)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 880 (1441)
. . .. +. .+..++++|++. .+|+|+||+|+
T Consensus 248 -----------~-------~---~~----~~--------~~~~l~~~~l~~------------------~~l~~vsl~i~ 276 (501)
T PRK10762 248 -----------R-------L---DK----AP--------GEVRLKVDNLSG------------------PGVNDVSFTLR 276 (501)
T ss_pred -----------c-------c---cc----CC--------CCcEEEEeCccc------------------CCcccceEEEc
Confidence 0 0 00 00 001245555431 26999999999
Q ss_pred CCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCC---CCCCCCCHHHHHHHH
Q 000529 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLFYS 953 (1441)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~ 953 (1441)
+||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|++ .+++.+||.|++.+.
T Consensus 277 ~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~ 354 (501)
T PRK10762 277 KGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLT 354 (501)
T ss_pred CCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhh
Confidence 9999999999999999999999998653 479999999875421 1345699999995 467889999999875
Q ss_pred HHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000529 954 AWLRLP---PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1441)
Q Consensus 954 ~~lr~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~ 1029 (1441)
...... .....++.++.++++++.++|. +..++.++ .|||||||||+||+||+.+|++|+|||||+|||+.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~ 429 (501)
T PRK10762 355 ALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVG 429 (501)
T ss_pred hhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHh
Confidence 321110 0012233345688999999995 56777654 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1030 ~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
++..+.+.|++++++|+|||++||++. .+.+.||++++|++ |++++.|+..+
T Consensus 430 ~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 430 AKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999878999999999986 57788999999985 89999998754
No 25
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-64 Score=626.93 Aligned_cols=458 Identities=22% Similarity=0.305 Sum_probs=349.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999999988 9999999998865432 2469999999888999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++...... .+.. ... ...+....++.+++.+||.+..++.+++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-~~~------------------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-NII------------------------DWREMRVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhccccccc--cccc-ccc------------------------CHHHHHHHHHHHHHHcCCCCCcccchhh--
Confidence 9999999875421000 0000 000 0011223467789999999888888876
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. . +++|++++|+..++.++||+|++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999754 3 56677789999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
|++++.|+++++.. . +..+
T Consensus 221 G~i~~~g~~~~~~~----------------------------~----------------~~~~----------------- 239 (510)
T PRK09700 221 GSSVCSGMVSDVSN----------------------------D----------------DIVR----------------- 239 (510)
T ss_pred CEEeeecchhhCCH----------------------------H----------------HHHH-----------------
Confidence 99999887654210 0 0000
Q ss_pred cccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHH
Q 000529 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1441)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1441)
+ .. + .. ..
T Consensus 240 ------------------------------~-----------------------------~~--~--~~-~~-------- 247 (510)
T PRK09700 240 ------------------------------L-----------------------------MV--G--RE-LQ-------- 247 (510)
T ss_pred ------------------------------H-----------------------------hc--C--CC-cc--------
Confidence 0 00 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHH
Q 000529 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1441)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1441)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCC
Q 000529 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1441)
Q Consensus 641 l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~ 720 (1441)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred CccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 000529 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1441)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1441)
.. . . .
T Consensus 251 -~~------------------~---------------------------------~----------------------~- 255 (510)
T PRK09700 251 -NA------------------M---------------------------------K----------------------E- 255 (510)
T ss_pred -cc------------------c---------------------------------c----------------------c-
Confidence 00 0 0 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEe
Q 000529 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1441)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 880 (1441)
.. . . .. + +..+.++|+++.. ..+|+||||+|+
T Consensus 256 -----------~~------~---~-----~~-~-------~~~l~~~~l~~~~---------------~~~l~~isl~i~ 287 (510)
T PRK09700 256 -----------NV------S---N-----LA-H-------ETVFEVRNVTSRD---------------RKKVRDISFSVC 287 (510)
T ss_pred -----------cc------c---c-----CC-C-------CcEEEEeCccccC---------------CCcccceeEEEc
Confidence 00 0 0 00 0 0125666665321 137999999999
Q ss_pred CCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccC---CCCCCCCCHHHHHHHH
Q 000529 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESLFYS 953 (1441)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~lTv~E~l~f~ 953 (1441)
+||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|+ ..+++.+||.|++.+.
T Consensus 288 ~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~ 365 (510)
T PRK09700 288 RGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAIS 365 (510)
T ss_pred CCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccc
Confidence 9999999999999999999999998653 479999999875321 234568999998 4577889999999875
Q ss_pred HHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 954 AWLR---LPP--E-VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 954 ~~lr---~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
...+ ... . ......++.++++++.+++. +..++.++ .|||||||||+|||+|+.+|+||||||||+||
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~lLlLDEPt~~L 440 (510)
T PRK09700 366 RSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGI 440 (510)
T ss_pred cccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 3211 000 0 11223335678999999996 66777654 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|+.++..+++.|++++++|.|||++|||+. .+.+.||++++|++ |++++.++.
T Consensus 441 D~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 441 DVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999999878999999999986 57788999999985 799988865
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.1e-63 Score=623.44 Aligned_cols=463 Identities=22% Similarity=0.278 Sum_probs=348.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCCCc-------cceEEEEcCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998610 128999999998765321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHhHhc-CCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc--
Q 000529 236 N--HIGEMTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI-- 310 (1441)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1441)
. +++.+||+|++.+..... +. . ..+...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGM----------R------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCC----------C------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988653321 10 0 0112234678899999975
Q ss_pred -ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHH
Q 000529 311 -CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1441)
Q Consensus 311 -~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1441)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++. ..+.+|++++|+.+++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQ-ELNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHH-hcCCeEEEEcCcHHHHH
Confidence 35777766 999999999999999999999999999999999999999999998754 33566777899999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhch
Q 000529 390 NLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFH 469 (1441)
Q Consensus 390 ~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1441)
++||+|++|++|++++.|+++++.+. |.
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------------------------- 249 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------------------------- 249 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC--------------------------------------------
Confidence 99999999999999999987654210 00
Q ss_pred hhhhhHhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 000529 470 VGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKD 549 (1441)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~ 549 (1441)
+. + . +.+ + ...
T Consensus 250 ------------------~~-------~-------~-----~~~----------------------------~--~~~-- 260 (529)
T PRK15134 250 ------------------HP-------Y-------T-----QKL----------------------------L--NSE-- 260 (529)
T ss_pred ------------------CH-------H-------H-----HHH----------------------------H--HhC--
Confidence 00 0 0 000 0 000
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCC
Q 000529 550 SVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGY 629 (1441)
Q Consensus 550 ~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1441)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHH
Q 000529 630 DPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQN 709 (1441)
Q Consensus 630 ~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~ 709 (1441)
+.
T Consensus 261 --------------------------------------------------------------~~---------------- 262 (529)
T PRK15134 261 --------------------------------------------------------------PS---------------- 262 (529)
T ss_pred --------------------------------------------------------------cc----------------
Confidence 00
Q ss_pred HHHHhhhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccc
Q 000529 710 GILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFE 789 (1441)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~ 789 (1441)
. . +
T Consensus 263 --------~---~-----------------------------------------------------~------------- 265 (529)
T PRK15134 263 --------G---D-----------------------------------------------------P------------- 265 (529)
T ss_pred --------c---c-----------------------------------------------------c-------------
Confidence 0 0 0
Q ss_pred cccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccch-hhccCCCCCc
Q 000529 790 SDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQ-MKLQGVPEDK 868 (1441)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 868 (1441)
. . . . .. . +..++++|+++.++.... .+ ...++
T Consensus 266 ---------~------------~-------~----~----~~-~-------~~~l~~~~l~~~~~~~~~~~~---~~~~~ 298 (529)
T PRK15134 266 ---------V------------P-------L----P----EP-A-------SPLLDVEQLQVAFPIRKGILK---RTVDH 298 (529)
T ss_pred ---------c------------c-------c----C----CC-C-------CCcccccCcEEEeecCccccc---ccccc
Confidence 0 0 0 0 00 0 002455566655421100 00 00013
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc------ccceEEEEeccCC--CC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------TFARISGYCEQND--IH 940 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~ 940 (1441)
+.+|+|||++|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 379999999875321 1245689999996 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000529 941 SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1441)
Q Consensus 941 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlL 1019 (1441)
++.+||.|++.+....+.. .....+.++.++++++.++|. +..++.+ ..|||||||||+|||||+.+|++|+|
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 7889999999886543211 122334456688999999997 4566654 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1020 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||||+|||+.++..+++.|++++++ |+|||++||++. .+.+.||++++|++ |+++..|+.
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999865 899999999986 47788999999985 799998875
No 27
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.7e-63 Score=678.69 Aligned_cols=210 Identities=19% Similarity=0.234 Sum_probs=177.6
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++|+||+++++. +.+.+|+|||++|+|||.+||+|+||||||||+++|+|... .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999998852 23469999999999999999999999999999999999864 37999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 991 (1441)
+.. ..+++.++||||++.+++. |++|||.... . ..++.++++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~------~----~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE------Q----WSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc------C----CCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 764 3467889999999999974 9999994211 1 123457889999888653 35566653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 34699999999999999999999999999999999999999999999875 4799999999975 4567999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.7e-63 Score=620.31 Aligned_cols=445 Identities=24% Similarity=0.329 Sum_probs=344.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcceEEEECC-----------------------eeC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL--DPSLKVSGRVTYNG-----------------------HNM 219 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~V~~~G-----------------------~~~ 219 (1441)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 576 89999972 221
Q ss_pred C-------CC------CccceEEEEcCC-CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHH
Q 000529 220 D-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFM 285 (1441)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~ 285 (1441)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~---------------------------- 141 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE---------------------------- 141 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------------------------
Confidence 1 00 013469999997 67888899999999875432210
Q ss_pred HhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHH
Q 000529 286 KAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1441)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~ 365 (1441)
..+...+++++++.+||++..+..+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.
T Consensus 142 ------~~~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 142 ------GKEAVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred ------HHHHHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001123467789999999888887776 999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhh
Q 000529 366 FKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQY 445 (1441)
Q Consensus 366 l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~ 445 (1441)
|+++++. .+++|++++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 211 l~~l~~~-~g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~---------------------------- 261 (520)
T TIGR03269 211 LEEAVKA-SGISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM---------------------------- 261 (520)
T ss_pred HHHHHHh-cCcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH----------------------------
Confidence 9987643 35677889999999999999999999999998876654311000
Q ss_pred hhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHH
Q 000529 446 WAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIF 525 (1441)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~ 525 (1441)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHH
Q 000529 526 KLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSW 605 (1441)
Q Consensus 526 ~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~ 605 (1441)
. ... .
T Consensus 262 ----------------~--~~~-~-------------------------------------------------------- 266 (520)
T TIGR03269 262 ----------------E--GVS-E-------------------------------------------------------- 266 (520)
T ss_pred ----------------h--hch-h--------------------------------------------------------
Confidence 0 000 0
Q ss_pred HHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhccc
Q 000529 606 ILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFV 685 (1441)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~ 685 (1441)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHH
Q 000529 686 LSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNV 765 (1441)
Q Consensus 686 i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i 765 (1441)
+ .
T Consensus 267 -----~------------------------------~------------------------------------------- 268 (520)
T TIGR03269 267 -----V------------------------------E------------------------------------------- 268 (520)
T ss_pred -----h------------------------------c-------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceee
Q 000529 766 GFALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLT 845 (1441)
Q Consensus 766 ~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1441)
+. . . . . . + ...++
T Consensus 269 -------------~~------------------~-------------~------~---~------~--~------~~~l~ 281 (520)
T TIGR03269 269 -------------KE------------------C-------------E------V---E------V--G------EPIIK 281 (520)
T ss_pred -------------cc------------------c-------------c------c---C------C--C------CceEE
Confidence 00 0 0 0 0 0 0 00256
Q ss_pred EeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEc-Ccc---
Q 000529 846 FDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRIS-GYP--- 921 (1441)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~--- 921 (1441)
++|+++.++.. ..+++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++ |.+
T Consensus 282 ~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~ 351 (520)
T TIGR03269 282 VRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVD 351 (520)
T ss_pred EeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCcccc
Confidence 67777665310 01224699999999999999999999999999999999998653 47999996 532
Q ss_pred CCc------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccccC
Q 000529 922 KKQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-----LRQSLVGL 990 (1441)
Q Consensus 922 ~~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~ 990 (1441)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..++.++++++.++|.+ ..++.+
T Consensus 352 ~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-- 425 (520)
T TIGR03269 352 MTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP-- 425 (520)
T ss_pred ccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh--
Confidence 111 112456899999988889999999998754321 122333456788999999975 345553
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
..|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++||++. .+.+.||++++|
T Consensus 426 ---~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l 501 (520)
T TIGR03269 426 ---DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALM 501 (520)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999999765 899999999986 577889999999
Q ss_pred ecCcEEEEEcCC
Q 000529 1070 KRGGREVYVGPL 1081 (1441)
Q Consensus 1070 ~~gG~~v~~G~~ 1081 (1441)
++ |++++.|+.
T Consensus 502 ~~-G~i~~~g~~ 512 (520)
T TIGR03269 502 RD-GKIVKIGDP 512 (520)
T ss_pred EC-CEEEEECCH
Confidence 85 899998875
No 29
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4.9e-63 Score=617.91 Aligned_cols=454 Identities=20% Similarity=0.275 Sum_probs=346.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 2469999999989999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.|+.... . +....++++++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~~--------------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPKR--------------Q------------------------ASMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhcccccc--------------h------------------------HHHHHHHHHHHHcCCCccccCChhh--
Confidence 99999998853210 0 0112356789999999888888876
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. . +.+|+.++|+.+++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3 56777799999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
|++++.|+++++... + ..+.+
T Consensus 216 G~i~~~g~~~~~~~~---------------------------~-----------------~~~~~--------------- 236 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------------------D-----------------IIQAI--------------- 236 (510)
T ss_pred CEEEEecChHHcCHH---------------------------H-----------------HHHHH---------------
Confidence 999999987653210 0 00000
Q ss_pred cccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHH
Q 000529 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1441)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1441)
........ ..
T Consensus 237 -------------------------------------------------------------~~~~~~~~-~~-------- 246 (510)
T PRK15439 237 -------------------------------------------------------------TPAAREKS-LS-------- 246 (510)
T ss_pred -------------------------------------------------------------hCcccccc-cc--------
Confidence 00000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHH
Q 000529 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1441)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1441)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK15439 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCC
Q 000529 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1441)
Q Consensus 641 l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~ 720 (1441)
. .. .
T Consensus 247 -----------------------------------------------~--~~---------------------------~ 250 (510)
T PRK15439 247 -----------------------------------------------A--SQ---------------------------K 250 (510)
T ss_pred -----------------------------------------------c--cc---------------------------c
Confidence 0 00 0
Q ss_pred CccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 000529 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1441)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1441)
.. ..+ +
T Consensus 251 ~~-----------------~~~---------------------------------~------------------------ 256 (510)
T PRK15439 251 LW-----------------LEL---------------------------------P------------------------ 256 (510)
T ss_pred cc-----------------ccc---------------------------------c------------------------
Confidence 00 000 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEe
Q 000529 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1441)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 880 (1441)
... . .. + .+ +..+.++|++. .+|+|||++|+
T Consensus 257 -----------~~~-----~------~~-~--~~------~~~l~~~~l~~------------------~~l~~isl~i~ 287 (510)
T PRK15439 257 -----------GNR-----R------QQ-A--AG------APVLTVEDLTG------------------EGFRNISLEVR 287 (510)
T ss_pred -----------ccc-----c------cc-C--CC------CceEEEeCCCC------------------CCccceeEEEc
Confidence 000 0 00 0 00 01255556541 15899999999
Q ss_pred CCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCC---CCCCCCCHHHHHHHH
Q 000529 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLFYS 953 (1441)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~ 953 (1441)
+||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++...
T Consensus 288 ~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~ 365 (510)
T PRK15439 288 AGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCAL 365 (510)
T ss_pred CCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhh
Confidence 9999999999999999999999997653 479999999875431 1234689999984 477889999998642
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000529 954 AWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1441)
Q Consensus 954 ~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1032 (1441)
...+..........++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.++.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~ 440 (510)
T PRK15439 366 THNRRGFWIKPARENAVLERYRRALNIKFNHAEQAAR-----TLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARN 440 (510)
T ss_pred hhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccc-----cCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHH
Confidence 1111111011222345688999999997 66777654 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1033 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1033 ~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
.+++.|++++++|.|||++|||++ .+.+.||++++|++ |++++.|..++
T Consensus 441 ~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 441 DIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred HHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 999999999888999999999986 57788999999984 89999887643
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-62 Score=614.75 Aligned_cols=458 Identities=20% Similarity=0.280 Sum_probs=346.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 4699999999999999999999999999999999999886 5 8999999998865432 24699999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccc-ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICA-DTMVG 317 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg 317 (1441)
+.+||+||+.++......+... ..++...+++.+++.+||++.. ++.++
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGRM------------------------------AYNAMYLRAKNLLRELQLDADNVTRPVG 140 (500)
T ss_pred CCCcHHHHHHhhcccccccccc------------------------------CHHHHHHHHHHHHHHcCCCCCcccCchh
Confidence 9999999999864321000000 0001123467789999998764 46666
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. .+++|+.++|+.+++.++||+|++
T Consensus 141 ~-----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~~~~~~d~i~~ 213 (500)
T TIGR02633 141 D-----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNEVKAVCDTICV 213 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHHHHHhCCEEEE
Confidence 6 999999999999999999999999999999999999999999998753 356777799999999999999999
Q ss_pred ecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhh
Q 000529 398 LSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDE 477 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1441)
|++|++++.|+.+++.. ++.
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~~---------------- 233 (500)
T TIGR02633 214 IRDGQHVATKDMSTMSE--------------------------------------------DDI---------------- 233 (500)
T ss_pred EeCCeEeeecCcccCCH--------------------------------------------HHH----------------
Confidence 99999987654321000 000
Q ss_pred hcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhh
Q 000529 478 LQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIY 557 (1441)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 557 (1441)
. . .+. + ..
T Consensus 234 ------------------------------------~-------------------~-----~~~--~--~~-------- 241 (500)
T TIGR02633 234 ------------------------------------I-------------------T-----MMV--G--RE-------- 241 (500)
T ss_pred ------------------------------------H-------------------H-----HHh--C--cc--------
Confidence 0 0 000 0 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHH
Q 000529 558 AGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFF 637 (1441)
Q Consensus 558 ~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~ 637 (1441)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhc
Q 000529 638 KQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFL 717 (1441)
Q Consensus 638 ~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~ 717 (1441)
.+
T Consensus 242 -----------------------------------------------------~~------------------------- 243 (500)
T TIGR02633 242 -----------------------------------------------------IT------------------------- 243 (500)
T ss_pred -----------------------------------------------------cc-------------------------
Confidence 00
Q ss_pred CCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccc
Q 000529 718 GHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRI 797 (1441)
Q Consensus 718 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1441)
. .. +
T Consensus 244 -----~------------------~~--------------------------------~--------------------- 247 (500)
T TIGR02633 244 -----S------------------LY--------------------------------P--------------------- 247 (500)
T ss_pred -----c------------------cc--------------------------------c---------------------
Confidence 0 00 0
Q ss_pred cCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeE
Q 000529 798 GGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSG 877 (1441)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 877 (1441)
. . . . +. . ...++++|+++.+.. .+++.+|+|+||
T Consensus 248 -~------------~-------~----~----~~-~-------~~~l~~~~l~~~~~~----------~~~~~~l~~is~ 281 (500)
T TIGR02633 248 -H------------E-------P----H----EI-G-------DVILEARNLTCWDVI----------NPHRKRVDDVSF 281 (500)
T ss_pred -c------------c-------c----c----CC-C-------CceEEEeCCcccccc----------ccccccccccee
Confidence 0 0 0 0 00 0 002555666543210 012358999999
Q ss_pred EEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc----cccceEEEEeccCC---CCCCCCCHHHHH
Q 000529 878 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESL 950 (1441)
Q Consensus 878 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l 950 (1441)
+|++||++||+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+|++
T Consensus 282 ~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~ 360 (500)
T TIGR02633 282 SLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNI 360 (500)
T ss_pred EEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHh
Confidence 9999999999999999999999999998652 137999999987632 12345689999995 478889999999
Q ss_pred HHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000529 951 FYSAWLRLP--PEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1441)
Q Consensus 951 ~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD 1027 (1441)
.++..-... ........++.++++++.+++.+ ..++.++ .|||||||||+||++|+.+|++|+|||||+|||
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD 435 (500)
T TIGR02633 361 TLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVD 435 (500)
T ss_pred cchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 875321110 01122334456889999999964 4666654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1028 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
+.++..+++.|++++++|.|||++|||++ .+.+.||++++|++ |+++..++..
T Consensus 436 ~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 436 VGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999888999999999986 57788999999985 7898887653
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-62 Score=614.02 Aligned_cols=452 Identities=22% Similarity=0.316 Sum_probs=345.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999988 9999999998754321 3579999999888999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++......+. . ...+....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------V------------------------NRRLLNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-------C------------------------CHHHHHHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999998632110000 0 0001123456789999998877877766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA--EGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998753 356777899999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhcC
Q 000529 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1441)
|+++..++..+. .+.++.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~------------------- 233 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQL------------------- 233 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHH-------------------
Confidence 999864421000 000000
Q ss_pred cccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhHH
Q 000529 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1441)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~ 560 (1441)
. . .+. . .. .
T Consensus 234 ------------------------~-----~----------------------------~~~--~--~~-~--------- 242 (501)
T PRK11288 234 ------------------------V-----Q----------------------------AMV--G--RE-I--------- 242 (501)
T ss_pred ------------------------H-----H----------------------------Hhc--C--CC-c---------
Confidence 0 0 000 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHHH
Q 000529 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1441)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1441)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCCC
Q 000529 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1441)
Q Consensus 641 l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~ 720 (1441)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 000529 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1441)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1441)
.. . . .
T Consensus 243 -~~------------------~------------------------------------------------------~-~- 247 (501)
T PRK11288 243 -GD------------------I------------------------------------------------------Y-G- 247 (501)
T ss_pred -cc------------------c------------------------------------------------------c-c-
Confidence 00 0 0 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEe
Q 000529 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1441)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 880 (1441)
.. . . +. .+..+.++|+++ ..+++|+|++|+
T Consensus 248 ------------~~-----~----~----~~--------~~~~l~~~~~~~-----------------~~~l~~isl~i~ 277 (501)
T PRK11288 248 ------------YR-----P----R----PL--------GEVRLRLDGLKG-----------------PGLREPISFSVR 277 (501)
T ss_pred ------------cc-----c----c----CC--------CCcEEEEecccc-----------------CCcccceeEEEe
Confidence 00 0 0 00 001245555541 138999999999
Q ss_pred CCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc----cccceEEEEeccCC---CCCCCCCHHHHHHHH
Q 000529 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLFYS 953 (1441)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l~f~ 953 (1441)
+||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+.
T Consensus 278 ~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~ 355 (501)
T PRK11288 278 AGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINIS 355 (501)
T ss_pred CCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccc
Confidence 999999999999999999999999865 347999999986532 12245689999986 478889999999775
Q ss_pred HHhcC-CCC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000529 954 AWLRL-PPE--VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1441)
Q Consensus 954 ~~lr~-~~~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~ 1029 (1441)
..... +.. ......++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~ 430 (501)
T PRK11288 356 ARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVG 430 (501)
T ss_pred cchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHh
Confidence 32111 000 11223345678999999994 66777754 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCCc
Q 000529 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHH 1084 (1441)
Q Consensus 1030 ~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~~ 1084 (1441)
++..+++.|+++++.|.|||++|||++ .+.+.+|++++|++ |++++.|..++.
T Consensus 431 ~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 431 AKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 999999999999888999999999986 57789999999985 899999987653
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-61 Score=602.83 Aligned_cols=450 Identities=18% Similarity=0.278 Sum_probs=343.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999998 9999999998764322 3569999999888899
Q ss_pred CCHHHHHHHHhH-hcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 241 MTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
+||+||+.++.. ..+.. . ...+....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--------~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--------V------------------------DQDKMYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccc--------c------------------------CHHHHHHHHHHHHHHcCCCCCccCchhh-
Confidence 999999988532 11100 0 0001123467789999999888888776
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|++++. .+.+|+.++|+.+++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998753 35667778999999999999999999
Q ss_pred CCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhc
Q 000529 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ 479 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1441)
+|+++..|+++++.. ++..+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 228 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIA---------------- 228 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHH----------------
Confidence 999998876542100 00000
Q ss_pred CcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhH
Q 000529 480 TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAG 559 (1441)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1441)
+ +. + ..
T Consensus 229 -------------------------------~-----------------------------~~--~--~~---------- 234 (491)
T PRK10982 229 -------------------------------M-----------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------H-----------------------------Hh--C--CC----------
Confidence 0 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHH
Q 000529 560 ALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQ 639 (1441)
Q Consensus 560 ~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~ 639 (1441)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCC
Q 000529 640 YLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGH 719 (1441)
Q Consensus 640 ~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1441)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred CCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccC
Q 000529 720 SWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGG 799 (1441)
Q Consensus 720 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1441)
.. .. .
T Consensus 236 --~~----------------------------------------------------~~---------------------~ 240 (491)
T PRK10982 236 --TQ----------------------------------------------------RF---------------------P 240 (491)
T ss_pred --cc----------------------------------------------------cc---------------------c
Confidence 00 00 0
Q ss_pred cccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEE
Q 000529 800 TVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAF 879 (1441)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 879 (1441)
.. . . .. .+..+.++|+++. .+.+|+|||+++
T Consensus 241 ------------~~------~----~----~~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i 271 (491)
T PRK10982 241 ------------DK------E----N----KP--------GEVILEVRNLTSL---------------RQPSIRDVSFDL 271 (491)
T ss_pred ------------cc------c----C----CC--------CCcEEEEeCcccc---------------cCcccceeeEEE
Confidence 00 0 0 00 0013566676643 124899999999
Q ss_pred eCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCCC---CCCCCCHHHHHHH
Q 000529 880 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQNDI---HSPFVTVYESLFY 952 (1441)
Q Consensus 880 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~---~~~~lTv~E~l~f 952 (1441)
++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|+.. +++.+|+.++..+
T Consensus 272 ~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~ 349 (491)
T PRK10982 272 HKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLI 349 (491)
T ss_pred eCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheeh
Confidence 99999999999999999999999998753 479999999876431 12445899999853 5778888777433
Q ss_pred HHH--hcCCCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000529 953 SAW--LRLPPE-VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1441)
Q Consensus 953 ~~~--lr~~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~ 1028 (1441)
... ...... ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~ 424 (491)
T PRK10982 350 SNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDV 424 (491)
T ss_pred hhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccCh
Confidence 210 000001 12223345678899999995 4556654 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1029 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
.++..+++.|+++.++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 425 ~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 425 GAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999888999999999986 57789999999985 8999877654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.5e-60 Score=592.57 Aligned_cols=447 Identities=19% Similarity=0.261 Sum_probs=331.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCC--C--
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNH--I-- 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 238 (1441)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5899999999999999999999999999999999999998 9999999977643321 2458999997532 1
Q ss_pred ----CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccc
Q 000529 239 ----GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1441)
Q Consensus 239 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1441)
..+||+|++.+.. +...+++.+++.+||++..++
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1457777664310 001235678999999988888
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++.+ . +.+|+.++|+.+++.++||+
T Consensus 132 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCCE
Confidence 8877 999999999999999999999999999999999999999999998754 3 56677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhh
Q 000529 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKL 474 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1441)
|++|++|+++.+|+++++.+. +.+. .
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~-------------------------~-------------- 230 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVA-------------------------Q-------------- 230 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhh-------------------------h--------------
Confidence 999999999999887654210 0000 0
Q ss_pred HhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccc
Q 000529 475 SDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDG 554 (1441)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~ 554 (1441)
.. . .+ .... .
T Consensus 231 ---~~--------~---------------------~~---------------------------------~~~~--~--- 240 (490)
T PRK10938 231 ---LA--------H---------------------SE---------------------------------QLEG--V--- 240 (490)
T ss_pred ---hh--------h---------------------hh---------------------------------ccCc--c---
Confidence 00 0 00 0000 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChh
Q 000529 555 GIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAG 634 (1441)
Q Consensus 555 ~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1441)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHh
Q 000529 635 RFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILAN 714 (1441)
Q Consensus 635 rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~n 714 (1441)
..|
T Consensus 241 -------------------------------------------------------~~~---------------------- 243 (490)
T PRK10938 241 -------------------------------------------------------QLP---------------------- 243 (490)
T ss_pred -------------------------------------------------------ccC----------------------
Confidence 000
Q ss_pred hhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 000529 715 EFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQD 794 (1441)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~ 794 (1441)
.. .
T Consensus 244 -------~~-------------------------------------------------------------------~--- 246 (490)
T PRK10938 244 -------EP-------------------------------------------------------------------D--- 246 (490)
T ss_pred -------cc-------------------------------------------------------------------c---
Confidence 00 0
Q ss_pred ccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeec
Q 000529 795 NRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNG 874 (1441)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 874 (1441)
. .. . .... .. ....++++|+++.++ ++.+|+|
T Consensus 247 ----~------------~~------~---~~~~--~~--------~~~~l~~~~l~~~~~-------------~~~il~~ 278 (490)
T PRK10938 247 ----E------------PS------A---RHAL--PA--------NEPRIVLNNGVVSYN-------------DRPILHN 278 (490)
T ss_pred ----c------------cc------c---cccc--CC--------CCceEEEeceEEEEC-------------CeeEEee
Confidence 0 00 0 0000 00 011377888887652 2469999
Q ss_pred eeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc----cccceEEEEeccCCCCCC--CCCHHH
Q 000529 875 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDIHSP--FVTVYE 948 (1441)
Q Consensus 875 vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~E 948 (1441)
+||++++||+++|+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+.+ ..|+++
T Consensus 279 vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 357 (490)
T PRK10938 279 LSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRN 357 (490)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHH
Confidence 9999999999999999999999999999996431 137999999976421 123456999999876543 256777
Q ss_pred HHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 949 SLFYSAWL--RLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 949 ~l~f~~~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
++.+.... ....... ...++.++++++.++|.+ ..++.++ .|||||||||+||+||+.+|++|+|||||+|
T Consensus 358 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~lllLDEPt~g 431 (490)
T PRK10938 358 VILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPFH-----SLSWGQQRLALIVRALVKHPTLLILDEPLQG 431 (490)
T ss_pred HHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 66543211 1111111 223456889999999987 7777644 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcC-CEEEEEecCCcHHHHH-hhCeEEEEecCcEEEEEc
Q 000529 1026 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g-~tvi~~~H~~~~~i~~-~~D~vllL~~gG~~v~~G 1079 (1441)
||+.++..+++.|++++++| .|||++||+++ ++.+ .+|++++|++ |++++.-
T Consensus 432 LD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~~ 485 (490)
T PRK10938 432 LDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRYV 485 (490)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEee
Confidence 99999999999999998775 47999999986 4555 5899999985 7776653
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-58 Score=514.87 Aligned_cols=470 Identities=25% Similarity=0.340 Sum_probs=365.6
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCeeCCCCCcc-------ceEEEEcC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVPE-------RTAAYISQ 233 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1441)
....++++||+.+++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999976 245689999999997654432 36999999
Q ss_pred CC--CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccc
Q 000529 234 HD--NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC 311 (1441)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1441)
++ .+-|-.|+...|.-..++... + .+.+.+.++-++|+..|+.+.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------L------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------c------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 97 466777888888776665421 1 122234567788999999876
Q ss_pred cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh
Q 000529 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1441)
Q Consensus 312 ~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l 391 (1441)
.... +.+...|||||||||.||.||+.+|++|+.||||++||-....+|.++|+++.. .-+..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~-~~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQA-ELGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHH-HhCcEEEEEeccHHHHHHh
Confidence 5443 345567999999999999999999999999999999999999999999999865 4578888899999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhh
Q 000529 392 FDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVG 471 (1441)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1441)
+|+|+||.+|++|++|+.+.+.. .|.+ |
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------p------------------- 252 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------P------------------- 252 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------h-------------------
Confidence 99999999999999999876632 1111 0
Q ss_pred hhhHhhhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 000529 472 QKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSV 551 (1441)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~ 551 (1441)
|. |.++ +.
T Consensus 253 -------------------------YT------------r~Ll------------------------------~a----- 260 (534)
T COG4172 253 -------------------------YT------------RKLL------------------------------AA----- 260 (534)
T ss_pred -------------------------HH------------HHHH------------------------------hc-----
Confidence 00 0000 00
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCC
Q 000529 552 TDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDP 631 (1441)
Q Consensus 552 ~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1441)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHH
Q 000529 632 NAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGI 711 (1441)
Q Consensus 632 ~~~rf~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al 711 (1441)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccc
Q 000529 712 LANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESD 791 (1441)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~ 791 (1441)
|-.+
T Consensus 261 ---eP~g------------------------------------------------------------------------- 264 (534)
T COG4172 261 ---EPSG------------------------------------------------------------------------- 264 (534)
T ss_pred ---CCCC-------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccccccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceee
Q 000529 792 EQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVL 871 (1441)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 871 (1441)
. . .+.+ +..+.-+..+|+...++.+..+-.. ..+...+
T Consensus 265 -------~--------------~------------~p~~-------~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~A 302 (534)
T COG4172 265 -------D--------------P------------PPLP-------EDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRA 302 (534)
T ss_pred -------C--------------C------------CCCC-------CCCCceEEecceEEEEecCCccccc--cchheEE
Confidence 0 0 0000 0011234444444444333211100 1134579
Q ss_pred eeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc------cccceEEEEeccCCC--CCCC
Q 000529 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETFARISGYCEQNDI--HSPF 943 (1441)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~~~~ 943 (1441)
+++||+++++||.+||+|.||||||||=.+|.+...+ +|.|.++|.++.. ...++.+-.|+||+. +.|.
T Consensus 303 Vd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPR 379 (534)
T COG4172 303 VDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPR 379 (534)
T ss_pred eccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcc
Confidence 9999999999999999999999999999999997753 5999999998753 235677899999985 6799
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000529 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1441)
Q Consensus 944 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEP 1022 (1441)
+||.|-+.=+.....| ..+..++++++.++|+.+||++- ++++ +.++|||||||++|||||+.+|++++||||
T Consensus 380 mtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEP 453 (534)
T COG4172 380 MTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEP 453 (534)
T ss_pred cCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCC
Confidence 9999988776665544 45778899999999999999874 3433 467999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||+||-.-+.+|.++||++.++ |.+-++++||.. -+-.+||+++||++ |++|+.||.
T Consensus 454 TSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 454 TSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred chHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9999999999999999999754 999999999986 47778999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.1e-58 Score=580.11 Aligned_cols=201 Identities=22% Similarity=0.318 Sum_probs=163.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 478889887652 34699999999999999999999999999999999998653 479999843 1
Q ss_pred CccccceEEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000529 923 KQETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1000 (1441)
..+||++|+. .+++.+||.|++.+...... .... +...+++++.+++.+ ..++.++ .|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKVG-----VLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 67788999999987643221 1111 123457899999964 4566543 699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE-EEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v-~~G 1079 (1441)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||++||++. .+.+.||++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 5778899999998767776 455
Q ss_pred C
Q 000529 1080 P 1080 (1441)
Q Consensus 1080 ~ 1080 (1441)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-58 Score=578.49 Aligned_cols=198 Identities=18% Similarity=0.253 Sum_probs=163.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 488899987763 24699999999999999999999999999999999998653 4799999873
Q ss_pred CccccceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHH
Q 000529 923 KQETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 999 (1441)
+.+||++|+.. +.+.+|++|++.+.. ... ..++.++++++.+++. +..+..++ .||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~~-----~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QEG-----DDEQAVRGTLGRLLFSQDDIKKSVK-----VLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cCC-----ccHHHHHHHHHHcCCChhHhcCccc-----ccCHH
Confidence 45899999864 456799999986421 111 1134578899999994 56666644 69999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE-EE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YV 1078 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v-~~ 1078 (1441)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++|||+. .+.+.||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57778999999986 6776 77
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=6.7e-57 Score=567.98 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=163.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.+. ++.+|+|||++|++|++++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECC-c-
Confidence 478889887652 34699999999999999999999999999999999998653 479999844 1
Q ss_pred CccccceEEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000529 923 KQETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1000 (1441)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..++.++ .|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKVG-----QLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 47788999999987643211 1111 123457899999964 4566543 599999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE-EEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v-~~G 1079 (1441)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++||++. .+.+.+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 4777899999998667776 444
Q ss_pred C
Q 000529 1080 P 1080 (1441)
Q Consensus 1080 ~ 1080 (1441)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8.1e-56 Score=555.11 Aligned_cols=211 Identities=20% Similarity=0.238 Sum_probs=172.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ + ..|+++|++|++||++||+||||||||||+++|+|..++ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 377888876542 2 248999999999999999999999999999999998653 47999875
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.++ .|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNVK-----DLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCcc-----cCCHHHHH
Confidence 1489999998888889999999875211 111 1246789999999987787754 59999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4777899999995 477777775
Q ss_pred CCc---chhHHHHHHhC
Q 000529 1082 GHH---SCHLISYFEAI 1095 (1441)
Q Consensus 1082 ~~~---~~~~~~yf~~~ 1095 (1441)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 13345566666
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-54 Score=552.94 Aligned_cols=197 Identities=22% Similarity=0.358 Sum_probs=160.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 478889887653 35699999999999999999999999999999999998653 4799988641
Q ss_pred CccccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHH
Q 000529 923 KQETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 999 (1441)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..++.++ .||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEETR-----RFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCchh-----hCCHH
Confidence 2589999974 34455677776531 1 11 122345788999999964 5666654 59999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE-EE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YV 1078 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v-~~ 1078 (1441)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 47788999999985 7876 88
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.3e-54 Score=550.51 Aligned_cols=202 Identities=24% Similarity=0.336 Sum_probs=162.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|||++|++|+++||+|||||||||||++|+|...+ .+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 478889887652 34699999999999999999999999999999999998653 4799988 4321
Q ss_pred CccccceEEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHH
Q 000529 923 KQETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 1000 (1441)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++.++ .|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPVK-----ALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChhh-----hCCHHH
Confidence 489999975 5778899999997753211 111 1123467889999985 45566654 599999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEE-EEEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE-VYVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~-v~~G 1079 (1441)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...||++++|+++|++ .|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999976 477789999999733555 4556
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-54 Score=513.47 Aligned_cols=451 Identities=22% Similarity=0.336 Sum_probs=352.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc----ceEEEEcCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1441)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++.....++ .-|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 4568999999999999999999999999999999999999998 99999999998765553 4589999999999
Q ss_pred CCCCHHHHHHHHhHhcC-CCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 239 GEMTVRETLAFAARCQG-VGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~-~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
|+|||.|||.++..... .+. .+..+....+..+|+.+|++...++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~g~-------------------------------id~~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFGL-------------------------------IDRKAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred CCccHHHHhhcccccccCCCc-------------------------------cCHHHHHHHHHHHHHHcCCCCChhhhhh
Confidence 99999999998754332 000 1112234456788999999766899998
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ ||+||||-|.||||+..++++++||||||+|+...+..+++.++++. .++..++.|+|..+|++++||||.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEE
Confidence 8 99999999999999999999999999999999999999999999974 4678888999999999999999999
Q ss_pred ecCCeEEEEcCH-HHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHh
Q 000529 398 LSDGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSD 476 (1441)
Q Consensus 398 L~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1441)
|.||+++..++. .+.- .++.
T Consensus 218 lRDG~~v~~~~~~~~~~--------------------------------------------~~~l--------------- 238 (500)
T COG1129 218 LRDGRVVGTRPTAAETS--------------------------------------------EDEL--------------- 238 (500)
T ss_pred EeCCEEeeecccccCCC--------------------------------------------HHHH---------------
Confidence 999999876652 2110 0000
Q ss_pred hhcCcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchh
Q 000529 477 ELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGI 556 (1441)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~ 556 (1441)
.
T Consensus 239 ----------------------------v--------------------------------------------------- 239 (500)
T COG1129 239 ----------------------------V--------------------------------------------------- 239 (500)
T ss_pred ----------------------------H---------------------------------------------------
Confidence 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHH
Q 000529 557 YAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRF 636 (1441)
Q Consensus 557 ~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf 636 (1441)
-.|+|-
T Consensus 240 -------------------------------------------------------------------~~MvGr------- 245 (500)
T COG1129 240 -------------------------------------------------------------------RLMVGR------- 245 (500)
T ss_pred -------------------------------------------------------------------HHhhCc-------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhh
Q 000529 637 FKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEF 716 (1441)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1441)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccc
Q 000529 717 LGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNR 796 (1441)
Q Consensus 717 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1441)
..+. .
T Consensus 246 ---~~~~------------------~------------------------------------------------------ 250 (500)
T COG1129 246 ---ELED------------------L------------------------------------------------------ 250 (500)
T ss_pred ---chhh------------------h------------------------------------------------------
Confidence 0000 0
Q ss_pred ccCcccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeecee
Q 000529 797 IGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVS 876 (1441)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 876 (1441)
. +. . ... ...+..+++++++. ...++|||
T Consensus 251 -----------------------~---~~-~-~~~------~~~~~~l~v~~l~~-----------------~~~~~dvS 279 (500)
T COG1129 251 -----------------------F---PE-P-PEE------GIGEPVLEVRNLSG-----------------GGKVRDVS 279 (500)
T ss_pred -----------------------c---cc-c-ccc------CCCCcEEEEecCCC-----------------CCceeCce
Confidence 0 00 0 000 00011244444331 12578999
Q ss_pred EEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCC---CCCCCCCHHHH
Q 000529 877 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQND---IHSPFVTVYES 949 (1441)
Q Consensus 877 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~ 949 (1441)
|++++||++||-|-=|||+|-|+++|.|... ...|+|.+||.+.... ..+.-++||+.|. -+++.++|.||
T Consensus 280 f~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~N 357 (500)
T COG1129 280 FTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAEN 357 (500)
T ss_pred eEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHh
Confidence 9999999999999999999999999999544 3479999999986532 2445689999864 46788999999
Q ss_pred HHHHHHhcCC-C-CCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 950 LFYSAWLRLP-P-EVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 950 l~f~~~lr~~-~-~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
+.++...+.. . -.+....++.+++..+.+++... .+..+ ..||||.+|||.|||.|..+|+||+|||||.|+
T Consensus 358 i~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGI 432 (500)
T COG1129 358 ITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGI 432 (500)
T ss_pred eehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCc
Confidence 9887332221 1 24555566678899999998643 33443 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|.-++.+|.+++++++++|++||++|-+.. |+..+||||++|.+ |+++-.=+.
T Consensus 433 DVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~ 485 (500)
T COG1129 433 DVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDR 485 (500)
T ss_pred ccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEecc
Confidence 999999999999999999999999999985 79999999999985 888764443
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.7e-52 Score=531.60 Aligned_cols=200 Identities=18% Similarity=0.269 Sum_probs=157.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 478899988763 123699999999999999999999999999999999998653 4799988652
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 1001 (1441)
..+||++|+. .+.+++.++..+......+ ... ++.+.++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 3589999975 2345666664322111111 111 245778999999974 455554 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE-EEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v-~~G~ 1080 (1441)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++|||+. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 3 49999999986 47778999999985 7887 7776
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.7e-50 Score=489.13 Aligned_cols=221 Identities=28% Similarity=0.343 Sum_probs=172.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1441)
..+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...|+ +|+|...+ .-+++|++|++...+..|
T Consensus 14 g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 14 GDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred CCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCcc
Confidence 3567999999999999999999999999999999999999998 99998765 247999999999998999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHH----hhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMK----AASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~----~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
|.+.+.-+..- .++...+... .....++++...... ....++-+.+.++..++.-||++.. ++.+++
T Consensus 83 v~~~v~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~ 153 (530)
T COG0488 83 VLDYVIEGFGE-----LRELLAELEE---AYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS 153 (530)
T ss_pred HHHHHHhhhHH-----HHHHHHHHHH---HHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh
Confidence 99999876532 1122222111 111122221111111 0111223445678889999999887 888887
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||.||++|++|+.+|++|+|||||++||..+..++-+.|++ ..+ ++|+++|++...-+.|++|+-+
T Consensus 154 -----LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 154 -----LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEe
Confidence 999999999999999999999999999999999999999999975 234 7777999999999999999999
Q ss_pred cCCeEE-EEcCHHHHH
Q 000529 399 SDGQIV-YQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv-~~G~~~~~~ 413 (1441)
+.|++. |.|.++...
T Consensus 224 d~g~l~~y~Gny~~~~ 239 (530)
T COG0488 224 DRGKLTPYKGNYSSYL 239 (530)
T ss_pred cCCceeEecCCHHHHH
Confidence 999875 677776543
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.4e-50 Score=465.77 Aligned_cols=458 Identities=21% Similarity=0.297 Sum_probs=359.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc----ceEEEEcCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1441)
...+++|||+++++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ --||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 577999999999999999999999999999999999999999 99999999998765553 35999999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
++||.|||..+..-... .+ ....+...+++.+.+.+||+--.|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------------------------------~~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------------------------------IDRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------------------------------cCHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999998643210 00 01122345577889999999999999998
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|++++. .+.+|+.|+|-..|+.++|||+.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999864 56777889999999999999999999
Q ss_pred CCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHHhchhhhhhHhhhc
Q 000529 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ 479 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1441)
.|+++-.-++. + + .+.+++++.
T Consensus 215 ~Gkvvgt~~~~--------------~--------------------------~---~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDPV--------------A--------------------------E---TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecCC--------------C--------------------------C---CCHHHHHHH---------------
Confidence 99986432100 0 0 000000000
Q ss_pred CcccccccccccccCcccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhhhcccCCCCccccchhhhH
Q 000529 480 TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAG 559 (1441)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1441)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchhHHHhhhcCCcChhhHHHHHHHHHhhHHHHHHHHHHHHHhhccCCCCChhHHHHH
Q 000529 560 ALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQ 639 (1441)
Q Consensus 560 ~lf~~~~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~ 639 (1441)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHhHcHHHHHHHHHHHhhhcCC
Q 000529 640 YLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGH 719 (1441)
Q Consensus 640 ~l~~~~~~~~~~~l~~~i~a~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1441)
+
T Consensus 240 -------------------------------------------------------------------------------~ 240 (501)
T COG3845 240 -------------------------------------------------------------------------------R 240 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCccccCCCccchhHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccC
Q 000529 720 SWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGG 799 (1441)
Q Consensus 720 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~v~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1441)
.-.. .
T Consensus 241 ~v~~---------------------------------------------------------------------------~ 245 (501)
T COG3845 241 EVVL---------------------------------------------------------------------------R 245 (501)
T ss_pred cccc---------------------------------------------------------------------------c
Confidence 0000 0
Q ss_pred cccccCCCCCCCCCcccCCCCcccccccCCCCCCCccccCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEE
Q 000529 800 TVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAF 879 (1441)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i 879 (1441)
... .+...+ +..++++|++..-. .+...+++|||++
T Consensus 246 ------------~~~--------------~~~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~V 281 (501)
T COG3845 246 ------------VVK--------------PPSTPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEV 281 (501)
T ss_pred ------------ccc--------------CCCCCC------CeEEEEeeeEeecC------------CCCceeeeeeeEE
Confidence 000 000000 12467777764422 1246899999999
Q ss_pred eCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC-C---ccc-cceEEEEeccCCC---CCCCCCHHHHHH
Q 000529 880 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK-K---QET-FARISGYCEQNDI---HSPFVTVYESLF 951 (1441)
Q Consensus 880 ~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~~~-~~~~~gyv~Q~~~---~~~~lTv~E~l~ 951 (1441)
++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. . ... .+.-++|||.|.. +.+.+|+.||+.
T Consensus 282 r~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~v 359 (501)
T COG3845 282 RAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLV 359 (501)
T ss_pred ecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhh
Confidence 99999999999999999999999997653 349999999986 2 222 2345899999864 467899999998
Q ss_pred HHHHhcCC----CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000529 952 YSAWLRLP----PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1441)
Q Consensus 952 f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD 1027 (1441)
+...-+.| .-.+....++...++++.+++....-. ...+.||||++||+-+||+|..+|++|+..+||.|||
T Consensus 360 L~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLD 435 (501)
T COG3845 360 LGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTRGLD 435 (501)
T ss_pred hhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCcccc
Confidence 76543211 124556677888999999998733211 1135699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1028 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++|+|.+|.+ |+++...++.+
T Consensus 436 vgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 436 VGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 99999999999999999999999999997 79999999999985 89998888754
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=378.32 Aligned_cols=214 Identities=25% Similarity=0.361 Sum_probs=188.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|++.++ +...+|+|||++|++||+++|+|||||||||||+||.|+.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5667776554 46789999999999999999999999999999999999876 34799999997543
Q ss_pred c----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 924 Q----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 924 ~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
. ...|+.+|+|+|+..+||++||.||+.++-..- ...++++.++...+.|+.+||.+.+|.+. .+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2 346788999999999999999999998875432 23566777788899999999999999874 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|||||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|.||+||++.. ..+.+|||+.|+ +|+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 667899999998 58999999
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=371.75 Aligned_cols=221 Identities=27% Similarity=0.409 Sum_probs=191.5
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC----CccceEEEEcCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~ 238 (1441)
....+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..|+.+|+|+|+.++|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 3567999999999999999999999999999999999999998 99999999876421 2357899999999999
Q ss_pred CCCCHHHHHHHHhHh-cCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 239 GEMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
|++||.||+..+..- ++ ..++++...+.++|+.+||.+.+|.++.
T Consensus 90 PHlTvleNv~lap~~v~~----------------------------------~~k~eA~~~A~~lL~~VGL~~ka~~yP~ 135 (240)
T COG1126 90 PHLTVLENVTLAPVKVKK----------------------------------LSKAEAREKALELLEKVGLADKADAYPA 135 (240)
T ss_pred ccchHHHHHHhhhHHHcC----------------------------------CCHHHHHHHHHHHHHHcCchhhhhhCcc
Confidence 999999999987532 11 1123344567789999999999999887
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
. |||||||||+|||||+.+|+++++|||||+|||....++.+.+++++. .+.+.++++|.+..+.+.+|||+.
T Consensus 136 q-----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~VadrviF 208 (240)
T COG1126 136 Q-----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREVADRVIF 208 (240)
T ss_pred c-----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHhhheEEE
Confidence 6 999999999999999999999999999999999999999999999975 457777799999999999999999
Q ss_pred ecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHh
Q 000529 398 LSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~ 435 (1441)
|++|+++.+|+++++ |..|.+....+||..
T Consensus 209 md~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 209 MDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 999999999999876 355666666667654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=392.22 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=153.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++. +..++++++|.|.+++.+|++||||+|||||||++.|...+ ..|.|.-.-+
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H-- 452 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSH-- 452 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--cccccccccc--
Confidence 5788888876642 22589999999999999999999999999999999997763 4566643221
Q ss_pred CccccceEEEEeccC--CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCCHH
Q 000529 923 KQETFARISGYCEQN--DIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-QSLVGLPGVNGLSTE 999 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~--~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgG 999 (1441)
.++++-.|+ +.+.-..++.|+++=. ...+.+.+.+..++..+||.... +.. .++||+|
T Consensus 453 ------~~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p-----~~~LS~G 513 (614)
T KOG0927|consen 453 ------NKLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVP-----MSQLSDG 513 (614)
T ss_pred ------ccchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccc-----hhhcccc
Confidence 112333332 2222345666665311 11133455678899999998544 333 4579999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||+||..|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++||... |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999775 4689999999874 788899999999988899998
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 75
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-42 Score=378.59 Aligned_cols=219 Identities=24% Similarity=0.324 Sum_probs=191.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++..+ .+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 4677776444321 11345799999999999999999999999999999999998764 5899999997654
Q ss_pred c------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 Q------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
. ...|+.+|+++|+..++...||.||+.|...+.. .++++++++|.++++.+||.+.++... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 2357889999999999999999999999987763 567889999999999999999888874 4799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
|||||||+|||||+.+|+||++|||||+|||++.+.|.++|+++.++ |.||+++||+++ -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 37779999999985 8999
Q ss_pred EEcCCC
Q 000529 1077 YVGPLG 1082 (1441)
Q Consensus 1077 ~~G~~~ 1082 (1441)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999974
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-42 Score=377.35 Aligned_cols=224 Identities=27% Similarity=0.370 Sum_probs=197.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1441)
+..++|+|||+.|++||+.+|+|+||||||||++++.++-.|+ +|+|.++|.++..+.. |+.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4578999999999999999999999999999999999999999 9999999998876643 478999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
++...||.||++|+.+..+.+ +++.+.++.++|+.+||++.+|..+
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccCc
Confidence 999999999999998877531 2334567889999999999999988
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
.+ |||||||||+|||||+.+|+||+.|||||+|||.|+..|++.|++..+ .-+.+|+.++|.++-+-++||||.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~-~lglTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINR-ELGLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHH-HcCCEEEEEechHHHHHHHhhhhe
Confidence 76 999999999999999999999999999999999999999999999865 456778889999999999999999
Q ss_pred EecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhhc
Q 000529 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v~ 437 (1441)
+|++|+++++|+..++. ..|.+.-.-+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhc
Confidence 99999999999998873 4455554555655443
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.8e-42 Score=362.76 Aligned_cols=230 Identities=25% Similarity=0.370 Sum_probs=198.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+++++++.+. +++.+|+|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 57788887654 567899999999999999999999999999999999998774 489999999986
Q ss_pred Cc------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000529 923 KQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNG 995 (1441)
Q Consensus 923 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 995 (1441)
.+ ...++.+|+++|+-.+|..+||+||+.|..+ .....+++..++.+..-|+.+||... .+.. +.+
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 1356789999999999999999999998653 33446677778888889999999887 6655 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||+|||++|||||+.+|+|||+||||+||||.++..+-++|+++.+. |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999997 58999999999985 89
Q ss_pred EEEEcCCCC----cchhHHHHHHhCC
Q 000529 1075 EVYVGPLGH----HSCHLISYFEAIP 1096 (1441)
Q Consensus 1075 ~v~~G~~~~----~~~~~~~yf~~~~ 1096 (1441)
+++.|++.+ ....+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 999999853 2245667887654
No 51
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.9e-37 Score=417.55 Aligned_cols=216 Identities=23% Similarity=0.353 Sum_probs=186.8
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++++|++..++. +++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 36888998877631 235799999999999999999999999999999999998763 48999999988
Q ss_pred CCc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 922 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.+++++++++.+||.+..++.++ .||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHH
Confidence 643 2345679999999999999999999999876653 2234445678999999999988888754 59999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||++||+++ ++..++|++++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57778999999985 8999999
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 85
No 52
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-42 Score=393.22 Aligned_cols=217 Identities=30% Similarity=0.443 Sum_probs=197.8
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc-ceEEEEcCCCCCCCCCCHHH
Q 000529 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1441)
Q Consensus 167 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1441)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998775 78999999999999999999
Q ss_pred HHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCC
Q 000529 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1441)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 325 (1441)
|++|+.+.++.. +++.+.+++++.+.|+|++..|+.+.. ||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 999999887541 223456788999999999999998866 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000529 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1441)
Q Consensus 326 GGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~ 405 (1441)
|||||||++||||+.+|++++||||+|.||...+.++...++++ |+.-++++|.++|+..|+..++|||++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~l-h~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKL-HERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHH-HHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999999999885 55667888889999999999999999999999999
Q ss_pred EcCHHHHHHHHHhcCCCCCCCCChhhHHH
Q 000529 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1441)
Q Consensus 406 ~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 434 (1441)
.|++.++. ..|.+.-+|+|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4577777777754
No 53
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=372.28 Aligned_cols=218 Identities=25% Similarity=0.391 Sum_probs=185.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++++++. + ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5789999988741 2 59999999999999999999999999999999999766 3589999999887
Q ss_pred CccccceEEEEeccCCCC--CCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 923 KQETFARISGYCEQNDIH--SPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
.+..-+..+|||||...+ ..-+||+|-+..+..-+... ....++.++.++++|+.+|+.+++|+.+|. ||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~-----LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGE-----LSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccc-----cCcH
Confidence 654435679999995432 22389999998764333211 112233467899999999999999999874 9999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||++++|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 5889999999996 5899999
Q ss_pred CCCC
Q 000529 1080 PLGH 1083 (1441)
Q Consensus 1080 ~~~~ 1083 (1441)
++.+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9864
No 54
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2e-41 Score=391.11 Aligned_cols=222 Identities=30% Similarity=0.434 Sum_probs=192.6
Q ss_pred eeEeceEEEEeccchhhccCCCCC-ceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPED-KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
+.++|++..+ + ++.+|+||||+|++||++||+||||||||||||+|+|...+ .+|+|.++|.+.
T Consensus 5 i~~~~l~k~~-------------~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 5 IEVRNLTKKY-------------GGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeecceEEEe-------------CCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 5566776554 3 46899999999999999999999999999999999998764 589999999887
Q ss_pred Cc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 923 KQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+.+++++ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 54 3567789999999999999999999999999986542 445667999999999998666654 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcC-CEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g-~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||+||+||+++|++|||||||+||||.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999997 68888999999985 8999999
Q ss_pred CCCCcchhHHHHHHh
Q 000529 1080 PLGHHSCHLISYFEA 1094 (1441)
Q Consensus 1080 ~~~~~~~~~~~yf~~ 1094 (1441)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 76 345554443
No 55
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-41 Score=375.35 Aligned_cols=219 Identities=28% Similarity=0.399 Sum_probs=189.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++.+|+++.++ ++.+|+|+||++++||+++|+||||||||||||+|+|..++ .+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 367888888763 56899999999999999999999999999999999997763 479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ..+++.++|+||.....+.+||+|.+.++..-+... ....++.++.++++|+.+|+.+++++.+. .|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccCh
Confidence 54 456789999999998888999999998874322211 11233444579999999999999998864 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||.|||||+++|+||+||||||.||...+.+++++++++++ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999985 59999999999985 7789999999984 89999
Q ss_pred EcCCCC
Q 000529 1078 VGPLGH 1083 (1441)
Q Consensus 1078 ~G~~~~ 1083 (1441)
.|++.+
T Consensus 220 ~G~p~e 225 (258)
T COG1120 220 QGTPEE 225 (258)
T ss_pred ecCcch
Confidence 999854
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=365.51 Aligned_cols=204 Identities=25% Similarity=0.374 Sum_probs=179.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++++++++. ...+|+|||++|.+||+++|+||||||||||||+|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 366777776653 36799999999999999999999999999999999998774 489999999987
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
.. ....+|||+|++.++|.+||+||+.|+...+. .+.+++++++++.|+.+||.+..|.. +.+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999877653 34566677899999999999999987 4579999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
||+|||||+.+|+||+||||+++||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999865 4899999999987 677789999999863
No 57
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=360.07 Aligned_cols=208 Identities=27% Similarity=0.423 Sum_probs=187.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1441)
++++++|+|++|++||+++++|||||||||+||+|.++.+|+ +|+|.+||+++.+.+. ||.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 9999999999987654 6899999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc--cccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI--CADTMVGD 318 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~ 318 (1441)
+||.|||++-..+++.. +++.+.+++++|+.+||+. .+++.+.+
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~~~~~RyP~e 135 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPSEYADRYPHE 135 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHHHHhhcCchh
Confidence 99999999977766531 2334567899999999974 77777765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||+|||.+||||+.+|++++||||+++|||-++.++.+.++++-+ .-+++|+.++|+.+|++.++|||++|
T Consensus 136 -----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~-~l~kTivfVTHDidEA~kLadri~vm 209 (309)
T COG1125 136 -----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQK-ELGKTIVFVTHDIDEALKLADRIAVM 209 (309)
T ss_pred -----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHH-HhCCEEEEEecCHHHHHhhhceEEEe
Confidence 999999999999999999999999999999999999999999988744 45677777999999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 000529 399 SDGQIVYQGPRELVLE 414 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1441)
++|+++..|++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999874
No 58
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=390.67 Aligned_cols=223 Identities=30% Similarity=0.430 Sum_probs=201.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1441)
...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 567999999999999999999999999999999999999999 9999999999998877 478999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||++|+++.++.. .+++.+.+++++|+.++|++.++..+.+
T Consensus 94 V~~NVafGLk~~~~~---------------------------------~~~~i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKL---------------------------------KKAEIKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCC---------------------------------CHHHHHHHHHHHHHHcCchhhhhhChhh----
Confidence 999999998844311 1123456789999999999999998876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||+|||++||||+.+|++|+||||.|+||..-+.++...++++.+. .+.+.|.++|+..|++.++|||++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~-~giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRE-LGITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHhhhccceEEccCCc
Confidence 9999999999999999999999999999999999999999999988664 47778889999999999999999999999
Q ss_pred EEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhh
Q 000529 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1441)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v 436 (1441)
|...|+++++ |..|...-+|||+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578888889998754
No 59
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=360.67 Aligned_cols=214 Identities=26% Similarity=0.359 Sum_probs=190.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++|+||+..+ +++.+++|+|++|++||+++++|||||||||+|++|.+...+ .+|+|.+||.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 4677777544 356799999999999999999999999999999999998764 5899999999876
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCH
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP--LRQSLVGLPGVNGLST 998 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 998 (1441)
. ...||.+|||-|...+||++||.||+.+--.+. ..++++.+++++|+|+++||.+ +++++ +++|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 357889999999999999999999998765553 4577888899999999999985 66766 467999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||+|||.+||||+++|+||+||||+++|||-++..+++.++++.++ |+|||++|||.+ +.+.++||+.+|+ +|+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999999765 999999999987 7889999999998 589999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
++++.
T Consensus 217 ~~~P~ 221 (309)
T COG1125 217 YDTPD 221 (309)
T ss_pred eCCHH
Confidence 99873
No 60
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-41 Score=356.54 Aligned_cols=222 Identities=26% Similarity=0.331 Sum_probs=188.2
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++-.++ +++++|+|||++|++||++||+|||||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888876553 45789999999999999999999999999999999999765 4579999999765
Q ss_pred Cc------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000529 923 KQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-----PEVNSETRKMFIEEVMELVELKPLRQSLVGLP 991 (1441)
Q Consensus 923 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 991 (1441)
.. ..+++.+||++|+..+.+.++|.+|+..+..-+.+ -....++.+..+-++|+.+|+.+.+-++.+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 24578899999999999999999999876432221 122334455567789999999999888755
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
.|||||+|||+|||||+.+|+||+.|||+++|||.+++.||+.|+++++ .|.|||++.||.+. ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 5999999999999999999999999999999999999999999999975 49999999999874 678999999998
Q ss_pred cCcEEEEEcCCCCcc
Q 000529 1071 RGGREVYVGPLGHHS 1085 (1441)
Q Consensus 1071 ~gG~~v~~G~~~~~~ 1085 (1441)
+ |+++|.||..+..
T Consensus 223 ~-G~ivfDg~~~el~ 236 (258)
T COG3638 223 A-GRIVFDGPASELT 236 (258)
T ss_pred C-CcEEEeCChhhhh
Confidence 5 8999999986543
No 61
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-40 Score=359.49 Aligned_cols=193 Identities=29% Similarity=0.443 Sum_probs=167.9
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc------ccc-ceEEEEeccCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETF-ARISGYCEQNDIHS 941 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~~~~~ 941 (1441)
..+|++||++|++||++||||||||||||||++|.|..++ .+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 57999999977542 123 45799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEe
Q 000529 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLD 1020 (1441)
|.+||.||+.+...+... .....++.++++++.+||.+..+ ++ +.+|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987765432 22255667889999999997666 54 3469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 1021 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
|||.+||+.++..|++++++++++ |+|||++|||| ++...|||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999865 99999999997 57889999999986 55
No 62
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=365.88 Aligned_cols=224 Identities=29% Similarity=0.461 Sum_probs=192.1
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCe---eCCCCCc-cceEEEEcCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGH---NMDEFVP-ERTAAYISQHDNHI 238 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~ 238 (1441)
....+++|||+.|+.||+++++|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.+|||+|+-.+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 6555333 47899999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.|||.+||+|+.+++.. + | ...+.+.+++++|+.+.|++.++.++-.
T Consensus 90 ~HmtVa~NIAFGl~~~~~--~-----------------p-------------~~~~~r~rv~elL~lvqL~~la~ryP~Q 137 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE--R-----------------P-------------SEAEIRARVEELLRLVQLEGLADRYPAQ 137 (345)
T ss_pred ccchHHhhhhhccccccc--C-----------------C-------------ChhhHHHHHHHHHHHhcccchhhcCchh
Confidence 999999999999987621 0 1 1223456788899999999999988765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||++||||+..|++|+||||+++||...+..+-+.|+++.. .-+.+.+.++|+.+|++++||||++|
T Consensus 138 -----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~-~~~~ttvfVTHD~eea~~ladrvvvl 211 (345)
T COG1118 138 -----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHD-RLGVTTVFVTHDQEEALELADRVVVL 211 (345)
T ss_pred -----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHH-hhCceEEEEeCCHHHHHhhcceEEEe
Confidence 999999999999999999999999999999999999999999998744 44666677999999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHh
Q 000529 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~ 435 (1441)
++|+|...||++++. ..|...-+..|+-+
T Consensus 212 ~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 212 NQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred cCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 999999999999985 34555555555443
No 63
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=360.38 Aligned_cols=194 Identities=27% Similarity=0.403 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
.++|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 67999999999999999999999999999999999999998 999999999883 3567899999999999999999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||+.|+.+.++.. +.+...+++..|+.+||....|..+.. |
T Consensus 91 ~NV~l~l~~~~~~----------------------------------~~e~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKS----------------------------------KAEARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccc----------------------------------hHhHHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 9999998876521 112233678899999999999998876 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC--Ce
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD--GQ 402 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~--G~ 402 (1441)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+. .+.+|+.++|+.+|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~-~~~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEE-TRKTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 999999999999999999999999999999999999999999887764 567777799999999999999999998 45
Q ss_pred E
Q 000529 403 I 403 (1441)
Q Consensus 403 i 403 (1441)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 64
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-40 Score=368.12 Aligned_cols=210 Identities=32% Similarity=0.469 Sum_probs=183.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc---ceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1441)
++++|+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999998 99999999999877653 789999999888889
Q ss_pred CCHHHHHHHHhHhc-CCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 241 MTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
+||+|-+.++..-. +. .+ ...++....++.+|+.+|+.+.+++.+.+
T Consensus 91 ~tV~d~V~~GR~p~~~~-------------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~~- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLGL-------------------FG------------RPSKEDEEIVEEALELLGLEHLADRPVDE- 138 (258)
T ss_pred cEEeehHhhcCCccccc-------------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCcccc-
Confidence 99999999974321 10 00 00111223678899999999999999987
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||.|||||+.+|++|+||||||+||...+.++++.++++.+. .+.+|++++|+.+.+..+||++++|+
T Consensus 139 ----LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 139 ----LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADHLILLK 213 (258)
T ss_pred ----cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764 45666778899999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998875
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-40 Score=350.35 Aligned_cols=210 Identities=26% Similarity=0.374 Sum_probs=183.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1441)
..+.||+|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 4567999999999999999999999999999999999999998 9999999999876543 467999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccc-cccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC-ADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 315 (1441)
+|..+||+||+.|..+-... + .+...+..+..-|+..||... +|.+
T Consensus 96 LFssltV~eNVafplre~~~---------l------------------------p~~~i~~lv~~KL~~VGL~~~~~~~~ 142 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK---------L------------------------PESLIRELVLMKLELVGLRGAAADLY 142 (263)
T ss_pred cccccchhHhhheehHhhcc---------C------------------------CHHHHHHHHHHHHHhcCCChhhhhhC
Confidence 99999999999997754321 1 111223445556888999877 7777
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+.+ ||||+|||+++|||++.+|+++|+||||+||||.++..+.++++++.+. -+.++++++|+.++++..+|+|
T Consensus 143 PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~-lg~T~i~VTHDl~s~~~i~Drv 216 (263)
T COG1127 143 PSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDA-LGLTVIMVTHDLDSLLTIADRV 216 (263)
T ss_pred chh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHh-hCCEEEEEECChHHHHhhhceE
Confidence 776 9999999999999999999999999999999999999999999988664 4667777999999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1441)
++|.+|+|+.+|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 66
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-40 Score=381.53 Aligned_cols=212 Identities=33% Similarity=0.471 Sum_probs=187.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC--CccceEEEEcCCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--VPERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1441)
.+.+|+|||+++++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999998 99999999987652 3357899999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+|||.|.+++.+... .....+++++++.+||++.+++.+++
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~~--- 136 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKANKKVRT--- 136 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhCcchhh---
Confidence 99999999998876421 01224578899999999866666655
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++. .++++|+..+|..+++..+||+|++|++|
T Consensus 137 --lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~-~g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 137 --LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAK-EGGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHh-CCCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999875 34467777889999999999999999999
Q ss_pred eEEEEcCHHHHHHHHHh
Q 000529 402 QIVYQGPRELVLEFFES 418 (1441)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1441)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998765543
No 67
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-41 Score=345.02 Aligned_cols=202 Identities=28% Similarity=0.375 Sum_probs=184.7
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc--cccceEEEEeccCCCCCCCCCH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVTV 946 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 946 (1441)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+..+ ...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3489999999999999999999999999999999998774 48999999998643 3467889999988888999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
+|||.|.+++. +...++.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 35567778899999999999999999987 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|..+...+.+.++++.+.|++||++||.++ ++..+||++++|++ |++++.|+..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999988999999999986 68889999999985 8999999873
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=362.91 Aligned_cols=206 Identities=30% Similarity=0.456 Sum_probs=185.9
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCc---cCCc-cccceEEEEeccCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY---PKKQ-ETFARISGYCEQNDIHSP 942 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 942 (1441)
+...+++|||+.|+.||++||+|||||||||||++|+|..++ ..|.|.+||. +.++ ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 456789999999999999999999999999999999998874 4899999999 5544 334678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000529 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1441)
Q Consensus 943 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEP 1022 (1441)
++||.||+.|+...+ ....+..+.+.+++++|+.+.|++..+.+ +.+|||||||||++||||+.+|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998777 33345667788899999999999999987 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
+++||+.-+.++.+.|+++.++ |.|+|++|||+. +.++.+|+|++|++ |++...||+.
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999876 999999999986 79999999999985 8999999874
No 69
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.8e-40 Score=337.16 Aligned_cols=214 Identities=26% Similarity=0.324 Sum_probs=183.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.|+||+..|+ .++++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 46777765543 23569999999999999999999999999999999999765 34799999999864
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. -.+|++|+|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+.++.+ +.+||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 31 257899999999999999999999999877653 35567788899999999999988876 45799
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||||+||||++.+|++|+.||||.+|||..+.+||+++.++.+.|.|||+.|||.+. +...-.+++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999999999999999642 3344567888874 89887
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
....
T Consensus 218 d~~~ 221 (223)
T COG2884 218 DESR 221 (223)
T ss_pred cccc
Confidence 6543
No 70
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=340.81 Aligned_cols=211 Identities=31% Similarity=0.363 Sum_probs=187.5
Q ss_pred CccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCC
Q 000529 160 STKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNH 237 (1441)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1441)
+.+....+++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+.+ .++.+|.++.+..+
T Consensus 10 ~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~gl 86 (245)
T COG4555 10 SYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGL 86 (245)
T ss_pred hccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcCh
Confidence 3344456999999999999999999999999999999999999999 999999999876543 36889999987889
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
+..||++|||.|.+++.+.. ..+.+.+++.+.+.|+|.+|.|+.+|
T Consensus 87 Y~RlT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~ 132 (245)
T COG4555 87 YARLTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVG 132 (245)
T ss_pred hhhhhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999999999998876531 12344568889999999999999999
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ +|-|+||||+|||||+.+|+++++||||||||..++..+.+.++++. ..+.+|+..+|.++|+.++||+|++
T Consensus 133 ~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrviv 205 (245)
T COG4555 133 E-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIV 205 (245)
T ss_pred h-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEE
Confidence 7 99999999999999999999999999999999999999999998863 4467778889999999999999999
Q ss_pred ecCCeEEEEcCHHHHHH
Q 000529 398 LSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1441)
|++|++|+.|+.+++.+
T Consensus 206 lh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 206 LHKGEVVLEGSIEALDA 222 (245)
T ss_pred EecCcEEEcCCHHHHHH
Confidence 99999999999988754
No 71
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=355.94 Aligned_cols=207 Identities=29% Similarity=0.446 Sum_probs=178.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCC--CCCCCCCH
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHD--NHIGEMTV 243 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1441)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+.++|||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 5999999999999999999999999999999999999998 999999999887766667899999963 34445899
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+|.+..+..-+. + ...... ++.+..++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-g----~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-G----WFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-c----cccccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999998732221 0 000011 11234688999999999999999998
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+ . +.+|++++|+...+.++||+|+.| ++++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~-e-g~tIl~vtHDL~~v~~~~D~vi~L-n~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQ-E-GKTVLMVTHDLGLVMAYFDRVICL-NRHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCcHHhHhhCCEEEEE-cCee
Confidence 999999999999999999999999999999999999999999999865 3 677788999999999999999999 4688
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+++++.
T Consensus 217 ~~~G~~~~~~ 226 (254)
T COG1121 217 IASGPPEEVL 226 (254)
T ss_pred EeccChhhcc
Confidence 9999999875
No 72
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-39 Score=373.71 Aligned_cols=215 Identities=28% Similarity=0.393 Sum_probs=191.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++.++. +..+|+|||++|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467777775542 2229999999999999999999999999999999999876 4589999999988
Q ss_pred Cc-cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
+. ...+|.+++|+|+..++|++||+||+.|+.+++. .++++.+++|+++.+.++|.+..|++. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 76 3456889999999999999999999999987763 456778889999999999999999884 57999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. +.+.++|++++|+ +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999999765 899999999974 7889999999998 589999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 74
No 73
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-39 Score=351.70 Aligned_cols=196 Identities=28% Similarity=0.437 Sum_probs=170.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1441)
..++|+++|+.|++||+++|+|||||||||||++|+|+..|+ +|.|.++|.++..+.. ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 378999999999999999999999999999999999999998 9999999999876643 357999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccc-cc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICAD-TM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 315 (1441)
++|++||+||+.+++.+.+...+ +....++.+++.+||.+..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999998876653210 12234677899999997766 77
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+.+ |||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+. .++++++++|+ +++...|||+
T Consensus 140 p~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 PSE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred chh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCC-HHHHHhCCEE
Confidence 776 9999999999999999999999999999999999999999999998764 45666667776 5677799999
Q ss_pred EEecCCeE
Q 000529 396 ILLSDGQI 403 (1441)
Q Consensus 396 ilL~~G~i 403 (1441)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 74
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-39 Score=345.38 Aligned_cols=217 Identities=25% Similarity=0.368 Sum_probs=182.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1441)
..+++|+|||+.|++||+++|+|||||||||||++|.|+.+|+ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4568999999999999999999999999999999999999998 9999999988766542 468999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
+.+.+||.+|+..+..-+. +.+.. -.+..+ ++.+..+-..|+.+|+.+.+.+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~s---------lfglfs---------------k~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRS---------LFGLFS---------------KEDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHH---------HhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 11111 111111 122334567899999999999988
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ |||||+|||+|||||+.+|++++.|||+++||+.++.++++.|++.....+ .++++.+|..+-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g-~Tvi~nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDG-ITVIVNLHQVDLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHHhhhe
Confidence 87 999999999999999999999999999999999999999999999887554 455556677899999999999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 000529 397 LLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1441)
-|++|+|+|+||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988654
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-40 Score=339.44 Aligned_cols=217 Identities=24% Similarity=0.317 Sum_probs=187.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCC---CCceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 919 (1441)
.++.+|++..+ +++++|+|||+.|++++++|++|||||||||||++|.... .+-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 57788888766 3567999999999999999999999999999999999843 3446889999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGV 993 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~ 993 (1441)
.++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++.++.|++.|+...|++. .|++-.+ .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 98643 246889999999999999 999999999988765432 6677889999999999764 4444332 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.+|||||+|||||||||+.+|+||+||||||+|||.+...|-+++.+++ +.-|||++||.+. ......|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 4699999999999999999999999999999999999999999999997 4699999999986 46778899999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
+++++|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999997
No 76
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-40 Score=340.11 Aligned_cols=222 Identities=26% Similarity=0.412 Sum_probs=182.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCCC-----ccceEEEEcCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN 236 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1441)
++.+|+|||+.|+++++||++|||||||||||++|..+.+ |..+++|+|.++|+++-+.. .|+++|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 4569999999999999999999999999999999998855 45688999999999986532 2689999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC-ccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL-DICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-~~~~dt~ 315 (1441)
-|| +|++||++|+.+..|... + +.+.+++..|+.-+| ++..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~--------------------------------~ldeiVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--K--------------------------------ELDEIVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--H--------------------------------HHHHHHHHHHHHhHhHHHhHHHh
Confidence 999 999999999999887521 0 112334555555555 2333333
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
= ....+|||||+||++|||+|+-+|+||+||||||+|||-++..|-+++.++. ..-+|++++|.+.++.+..|+.
T Consensus 144 ~--~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 H--KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred h--CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhh
Confidence 2 2345699999999999999999999999999999999999999999999874 3566777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHH
Q 000529 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 433 (1441)
..+..|++|+.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999987 3456666555554
No 77
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=372.90 Aligned_cols=216 Identities=27% Similarity=0.395 Sum_probs=192.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++-++ ++..+|+|||++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 57788877554 456899999999999999999999999999999999998764 479999999998
Q ss_pred Ccc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
... ..+|.+|+|+|+..+||++||+||+.|+.+++ .....++.+++++++++.++|.+..++++ .+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 653 35788999999999999999999999998743 23345667889999999999999998874 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+||||.|+||..-+..+..-++++.++ |.|.|++|||.. +.+.+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999999765 999999999976 78889999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 221 P~ 222 (352)
T COG3842 221 PE 222 (352)
T ss_pred HH
Confidence 74
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.6e-38 Score=370.76 Aligned_cols=214 Identities=27% Similarity=0.417 Sum_probs=186.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++..+. ++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 578889887653 35699999999999999999999999999999999998763 479999999986
Q ss_pred Cc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 923 KQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. .+..+.+++++++++.++|.+..++.++ +|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKVG-----ELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHHH
Confidence 43 2346779999999999999999999998765542 2334445568899999999988888754 699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 67788999999985 89999998
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 79
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-38 Score=370.15 Aligned_cols=206 Identities=24% Similarity=0.354 Sum_probs=180.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+++|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999999876532 45799999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.|+.+..+.. ..+...++.++++.+||.+..|..+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------------------------------KDEIKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999976543210 011223467789999999998888776
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+. .+.+|+.++|+.+.+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~-~g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRR-LGLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999997653 3566777899999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 80
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.9e-38 Score=372.84 Aligned_cols=207 Identities=27% Similarity=0.408 Sum_probs=182.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ +|.++||+|+..+||.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999999876544 4789999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+.++.. ..+....++++++.+||++..|+.+.+
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~~~~----- 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKYPGQ----- 134 (353)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCChhh-----
Confidence 99999987543210 111234578899999999999988766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+ ..+++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQR-RLGVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3456777789999999999999999999999
Q ss_pred EEEcCHHHHHH
Q 000529 404 VYQGPRELVLE 414 (1441)
Q Consensus 404 v~~G~~~~~~~ 414 (1441)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 81
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-38 Score=371.36 Aligned_cols=206 Identities=22% Similarity=0.368 Sum_probs=182.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999876555 4789999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+.++.. ..+...+++++++.+||.+..|+.+.+
T Consensus 96 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVP----------------------------------KEERKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999987644321 011234577899999999988888766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+||||++|||+.++.++.+.|+++.+ ..+++++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQ-QFNITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3456777799999999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 82
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.5e-38 Score=371.90 Aligned_cols=207 Identities=23% Similarity=0.340 Sum_probs=182.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcc--eEEEECCeeCCCCCc-cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVS--GRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1441)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ + |+|.++|+++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35899999999999999999999999999999999999998 8 999999999876544 46799999999999999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.|+.+..+.. ..+...+++++++.+||++..|+.+++
T Consensus 95 tv~enl~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gL~~~~~~~~~~--- 137 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------------------------------KADIAERVADALKLVGLGDAAAHLPAQ--- 137 (362)
T ss_pred cHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCCchhhCChhh---
Confidence 9999999987643211 011223567889999999999988876
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++....++++++.++|+..++..++|+|++|++|
T Consensus 138 --LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 138 --LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754322677788999999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999885
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-38 Score=373.65 Aligned_cols=206 Identities=25% Similarity=0.358 Sum_probs=182.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.++|++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999998 9999999999876544 4789999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+..+.. ..+...+++++++.+||++..++.+++
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999987543210 111223567899999999999988876
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+ ..+++++.++|+..++.+++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHR-RLKTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998754 3366777899999999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 84
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.5e-38 Score=368.82 Aligned_cols=217 Identities=22% Similarity=0.289 Sum_probs=186.0
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++.. .+.+.+|+||||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5788888776321 0124699999999999999999999999999999999998763 4799999998764
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.+||++|+..+++..||+||+.|..... ..+.++.++++.++++.+||.+..|..+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999999876543 2344556677899999999998888764 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 999999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 85
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.9e-38 Score=370.94 Aligned_cols=218 Identities=28% Similarity=0.379 Sum_probs=187.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+||.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999999876544 4779999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+.++.. ..+....++++++.+||++..|+.+.+
T Consensus 104 ~eNi~~~l~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------------------------------AAEITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 99999986543210 011223467889999999999988866
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRK-LGITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 356777799999999999999999999999
Q ss_pred EEEcCHHHHHHHHHhcCCCCCCCCChhhHH
Q 000529 404 VYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1441)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~adfl 433 (1441)
+..|+++++.+ .|....+|+|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998742 35544455554
No 86
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-37 Score=352.15 Aligned_cols=213 Identities=25% Similarity=0.359 Sum_probs=180.2
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5677776652 34699999999999999999999999999999999998653 47999999987543
Q ss_pred ------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 925 ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 925 ------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
...++.++|++|++.+++.+||.||+.+...... ....++.++.++++++.++|.+..++.++ .|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYPA-----ELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCH
Confidence 1245679999999999999999999988643221 12334445678899999999887776643 6999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||+||+||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999874 899999999986 57788999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9875
No 87
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-37 Score=368.36 Aligned_cols=208 Identities=20% Similarity=0.307 Sum_probs=183.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1441)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 356999999999999999999999999999999999999998 9999999999876544 467999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
+++++||+||+.|+.+..+.. .++...++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWP----------------------------------EQERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCchhhhCCh
Confidence 999999999999987654321 0112235678899999998888888
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.++++.+ ..+.+|+.++|+.+++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~-~~~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQA-TLQKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 76 999999999999999999999999999999999999999999998754 335667779999999999999999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 000529 397 LLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1441)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 88
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-38 Score=370.09 Aligned_cols=215 Identities=26% Similarity=0.372 Sum_probs=186.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887652 13469999999999999999999999999999999999876 35899999998764
Q ss_pred cc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 924 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
.. ..++.+|||+|++.++|++||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23467999999999999999999999986543 2344555677899999999999888875 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++|||+. ++.+++|++++|+ +|+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999999999999999999999999999765 999999999986 6889999999997 5899999987
Q ss_pred C
Q 000529 1082 G 1082 (1441)
Q Consensus 1082 ~ 1082 (1441)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 4
No 89
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-38 Score=348.36 Aligned_cols=207 Identities=28% Similarity=0.406 Sum_probs=184.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCC----CCCccceEEEEcCCC-CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMD----EFVPERTAAYISQHD-NHIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1441)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999999865 223367899999995 5678
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
.-||.|.++|+.+..+.. .++...+++.+++.+||.+.++..+.+
T Consensus 94 ~~tV~~evafg~~n~g~~----------------------------------~~e~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLP----------------------------------REEIEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCC----------------------------------HHHHHHHHHHHHHHcCchhhccCCccc-
Confidence 889999999998877642 112346788999999999999988876
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.. .++.++|.++|+.+.+.+++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999864 456777789999999999999999999
Q ss_pred CCeEEEEcCHHHHHH
Q 000529 400 DGQIVYQGPRELVLE 414 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1441)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-37 Score=368.97 Aligned_cols=215 Identities=26% Similarity=0.363 Sum_probs=188.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++.++. .+.+|+|||+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 477888887653 3569999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999986543 2344556678999999999999888764 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++|||++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 73
No 91
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3e-38 Score=319.11 Aligned_cols=201 Identities=25% Similarity=0.399 Sum_probs=176.6
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1441)
..++.|++||+++|+||||||||||||.|+|+..|. +|+|.+||.+.+...| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467889999999999999999999999999999998 9999999999887665 578999999999999999999999
Q ss_pred HHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhh
Q 000529 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1441)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 328 (1441)
++..- +-+ +. .+.+..++.++...||..+.++.++. |||||
T Consensus 94 LGl~P---~Lk------L~-------------------------a~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLSP---GLK------LN-------------------------AEQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCCc---ccc------cC-------------------------HHHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 87531 111 11 11234578889999999999999987 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcC
Q 000529 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 408 (1441)
Q Consensus 329 rkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~ 408 (1441)
||||++||+|+++.+||+||||+|+||+.-+.+....+.+++.. .+.++++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E-~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDE-RKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHh-hCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 99999999999999999999999999999999999999998765 45566667788899999999999999999999999
Q ss_pred HHHHH
Q 000529 409 RELVL 413 (1441)
Q Consensus 409 ~~~~~ 413 (1441)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98765
No 92
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.7e-38 Score=320.26 Aligned_cols=203 Identities=26% Similarity=0.387 Sum_probs=181.8
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCC
Q 000529 161 TKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQH 234 (1441)
Q Consensus 161 ~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~ 234 (1441)
+.....+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|+||+|+|+
T Consensus 11 Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD 87 (223)
T COG2884 11 YPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQD 87 (223)
T ss_pred cCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeee
Confidence 334466999999999999999999999999999999999999998 9999999999876532 5789999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccc
Q 000529 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1441)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1441)
..+++..||.||++|+.+..|.. ..+.+.++.++|+..||.+.++.
T Consensus 88 ~rLL~~~tvyeNVA~pL~v~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~~ 133 (223)
T COG2884 88 FRLLPDRTVYENVALPLRVIGKP----------------------------------PREIRRRVSEVLDLVGLKHKARA 133 (223)
T ss_pred ccccccchHhhhhhhhhhccCCC----------------------------------HHHHHHHHHHHHHHhccchhhhc
Confidence 99999999999999998877642 22345678889999999999998
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+-. |||||+|||+||||++.+|++|+.||||-.||+..+.+|++.+.++- ..+|+|++.+|+..-+-.+-.+
T Consensus 134 lP~~-----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeein--r~GtTVl~ATHd~~lv~~~~~r 206 (223)
T COG2884 134 LPSQ-----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEIN--RLGTTVLMATHDLELVNRMRHR 206 (223)
T ss_pred Cccc-----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHh--hcCcEEEEEeccHHHHHhccCc
Confidence 8765 99999999999999999999999999999999999999999999874 3578888899999999999999
Q ss_pred EEEecCCeEEEEc
Q 000529 395 IILLSDGQIVYQG 407 (1441)
Q Consensus 395 vilL~~G~iv~~G 407 (1441)
++.|++|+++...
T Consensus 207 vl~l~~Grl~~d~ 219 (223)
T COG2884 207 VLALEDGRLVRDE 219 (223)
T ss_pred EEEEeCCEEEecc
Confidence 9999999998754
No 93
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=367.32 Aligned_cols=215 Identities=24% Similarity=0.379 Sum_probs=188.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 478888887652 34699999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
... ..+|.+|||+|+..++|++||+||+.|+...+. .+.++.+++++++++.++|.+..++.. ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 234779999999999999999999999875442 344566778999999999998888764 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |+|+|++|||++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 73
No 94
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.3e-37 Score=364.43 Aligned_cols=215 Identities=26% Similarity=0.375 Sum_probs=186.7
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..+.++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3588899987763 35699999999999999999999999999999999998763 47999999988
Q ss_pred CCc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 922 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
... ...++.+||++|+..+++.+||+|++.+.+.++. .+..+..+.++++++.++|.+..++.++ .||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHH
Confidence 643 2345679999999999999999999987665432 2233344567889999999988888764 59999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999986 67789999999985 8999999
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 95
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.7e-38 Score=317.71 Aligned_cols=196 Identities=27% Similarity=0.351 Sum_probs=172.5
Q ss_pred ceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc-ccceEEEEeccCCCCCCCCCHHHHHHH
Q 000529 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLFY 952 (1441)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 952 (1441)
..+.+|++||++||+||||||||||||+|+|...+ .+|+|.|||.+.... ...|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 56788999999999999999999999999998774 489999999987653 345668999999999999999999977
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000529 953 SAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1441)
Q Consensus 953 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1032 (1441)
+.. |.-.-.++.+++++.++..+||..+.+++.+ +|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 642 2111224456679999999999999998855 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1033 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1033 ~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
++..++.++++ ++.|++++||+|+ +.....|+++++++ ||+.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 4899999999997 78899999999986 899999986
No 96
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-37 Score=359.93 Aligned_cols=206 Identities=27% Similarity=0.396 Sum_probs=180.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999976432 2467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.+++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchhh----
Confidence 9999998665543210 01123457789999999999998876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|..+++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998743 36677778999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998764
No 97
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2e-37 Score=367.09 Aligned_cols=215 Identities=25% Similarity=0.331 Sum_probs=187.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEE--EEEEEcCc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GDIRISGY 920 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 920 (1441)
.++++|+++++. ++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 477888887763 34699999999999999999999999999999999998764 46 99999998
Q ss_pred cCCcc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 921 PKKQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 921 ~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
+.... ..++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 76432 23567999999999999999999999986543 2344556677999999999999888875 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc--CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~--g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 67889999999985 89999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99863
No 98
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=344.68 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=187.5
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|++|+++. +..+|+|+|++|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 578888888642 25799999999999999999999999999999999998764 4699999998855
Q ss_pred ----ccccceEEEEeccCCCCC-CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 924 ----QETFARISGYCEQNDIHS-PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 924 ----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
...+++.+|||+|++... ..-||.|.+.|+..-. ..+.++.+++++++++.+|+.+.+++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345678899999998654 4579999999986533 345667888999999999999998876 356999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |+|||++|||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 799999999987 58888999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 99
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=364.50 Aligned_cols=210 Identities=25% Similarity=0.379 Sum_probs=181.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999999865443 3679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+....... . ...+...+++++++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~------~------------------------~~~~~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------P------------------------NAAAIKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC------C------------------------CHHHHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999998653210000 0 0111233567889999999888888766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 4456777899999999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 100
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-37 Score=343.16 Aligned_cols=210 Identities=29% Similarity=0.408 Sum_probs=176.3
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4667776552 2469999999999999999999999999999999999865 347999999987643
Q ss_pred c-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 925 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
. ..++.++|++|++.+++.+|++|++.+..... ....+..++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23457999999998888999999998765432 1223344556889999999988777764 3599999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999986 57788999999985 7887765
No 101
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=332.19 Aligned_cols=217 Identities=27% Similarity=0.344 Sum_probs=178.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++.+|++..++... ....+|+||||+|.+||++||+|+||||||||.++|+|..++ ..|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 367788876664321 112599999999999999999999999999999999998764 589999999876
Q ss_pred Ccc----ccceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000529 923 KQE----TFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNG 995 (1441)
Q Consensus 923 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 995 (1441)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++. ++++.++++.+||.+. .++. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~--~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKS--QQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHH--HHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 442 36778999999986 56889999988544322 122222 3348999999999763 4443 457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||||++|||||+.+|++|+||||||+||+..+..|+++|.++.++ |.|.|+++||.+. +..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999865 8899999999874 7788999999986 89
Q ss_pred EEEEcCCC
Q 000529 1075 EVYVGPLG 1082 (1441)
Q Consensus 1075 ~v~~G~~~ 1082 (1441)
+++.++.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 102
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-38 Score=334.75 Aligned_cols=221 Identities=28% Similarity=0.386 Sum_probs=191.1
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc----ceEEEEcCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1441)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4578999999999999999999999999999999999999998 99999999999887764 3578899999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
++|||.||+..++..+.. +.......+ ...+..+...++..+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~-------------------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPR-------------------ARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhcccc-------------------chhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998765421 000000000 0012234456678899999999999999998
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ .++.+|+.|-|+++-++++||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999754 46688888999999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 000529 399 SDGQIVYQGPRELVLE 414 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1441)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999863
No 103
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.1e-37 Score=361.66 Aligned_cols=202 Identities=28% Similarity=0.398 Sum_probs=177.0
Q ss_pred ceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc--cccceEEEEeccCCCCCCCCC
Q 000529 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 868 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45799999999999999999999999999999999998763 47999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
|+|++.+.+.++. ......++.++++++.++|.+..++.++ .|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 2333445568899999999988887754 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 57788999999985 899999986
No 104
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=330.35 Aligned_cols=205 Identities=26% Similarity=0.335 Sum_probs=177.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC----ccceEEEEcCCC--CCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----PERTAAYISQHD--NHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1441)
.++|+|||+++.+||..+|+|+||||||||.++|+|+.+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 37999999999999999999999999999999999999998 999999998876543 246799999996 577
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc-ccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI-CADTMVG 317 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 317 (1441)
|..||++.|.-+.+..+.+. ...++.++|+.+||+. .++..+-
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~R~P~ 140 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFLDRRPH 140 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHHhcCch
Confidence 89999999987765433210 1122677899999974 4555554
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ |||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||||++
T Consensus 141 e-----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~V 214 (252)
T COG1124 141 E-----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAV 214 (252)
T ss_pred h-----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheee
Confidence 4 999999999999999999999999999999999999999999998765 5677888899999999999999999
Q ss_pred ecCCeEEEEcCHHHHHH
Q 000529 398 LSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1441)
|++|++++.++.+++..
T Consensus 215 m~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 215 MDNGQIVEIGPTEELLS 231 (252)
T ss_pred eeCCeEEEeechhhhhc
Confidence 99999999999999864
No 105
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=363.75 Aligned_cols=217 Identities=26% Similarity=0.384 Sum_probs=185.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788876652 34699999999999999999999999999999999998663 4799999998764
Q ss_pred cc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 924 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
.. ..++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987653211 12344555678899999999998888764 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999986 68889999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 63
No 106
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.9e-37 Score=342.93 Aligned_cols=208 Identities=24% Similarity=0.327 Sum_probs=174.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 567888877631 124699999999999999999999999999999999998653 4799999998753
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.++|++|++.+++.+||.||+.+....+. ...+..++.++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 135679999999998899999999988754331 223344566889999999988777764 3699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999877999999999986 46678999999985 54
No 107
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-37 Score=341.24 Aligned_cols=200 Identities=28% Similarity=0.404 Sum_probs=172.6
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 948 (1441)
+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 5799999999999999999999999999999999998653 47999999987642 3567999999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000529 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1441)
Q Consensus 949 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~ 1028 (1441)
|+.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754331 223344566889999999988777664 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEec-CcEEEEEcCC
Q 000529 1029 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGREVYVGPL 1081 (1441)
Q Consensus 1029 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~-gG~~v~~G~~ 1081 (1441)
.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 57788999999985 4899988775
No 108
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.7e-37 Score=363.85 Aligned_cols=214 Identities=23% Similarity=0.331 Sum_probs=186.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899887763 34699999999999999999999999999999999998763 479999999876
Q ss_pred Ccc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
... ..+|.+|||+|++.++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23567999999999999999999999986543 2334455667899999999999888874 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999865 999999999986 68889999999985 89999998
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
+
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 109
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-37 Score=365.39 Aligned_cols=206 Identities=23% Similarity=0.324 Sum_probs=181.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+|+.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999999876544 4789999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
.||+.|+.+..+.. ..+...+++++++.+||.+..++.+.+
T Consensus 109 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999986543210 011234567889999999888888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999998876533 56777789999999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999875
No 110
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-37 Score=327.06 Aligned_cols=207 Identities=25% Similarity=0.388 Sum_probs=177.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc----ceEEEEcCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1441)
+.++|++||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+. +-++||||....|+
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 368999999999999999999999999999999999999987 99999999999887663 56999999999999
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHc-CCcccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGD 318 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~ 318 (1441)
+|||+|||..++..... .+ . .....+.+.+.| .|.+..+..-|+
T Consensus 92 ~LTVeENL~~g~~~~~~-~~----------~------------------------~~~~~e~v~~lFP~Lker~~~~aG~ 136 (237)
T COG0410 92 RLTVEENLLLGAYARRD-KE----------A------------------------QERDLEEVYELFPRLKERRNQRAGT 136 (237)
T ss_pred hCcHHHHHhhhhhcccc-cc----------c------------------------ccccHHHHHHHChhHHHHhcCcccC
Confidence 99999999987653310 00 0 000133444554 255666777776
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||+|.++|||||+++|++|+|||||.||-|.-..+|.+.++++.+ .++.+|+.+.|....+.+++||.++|
T Consensus 137 -----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 137 -----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred -----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEE
Confidence 999999999999999999999999999999999999999999999864 44578888999999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 000529 399 SDGQIVYQGPRELVLE 414 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1441)
.+|++++.|+.+++.+
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999998863
No 111
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-37 Score=341.31 Aligned_cols=212 Identities=28% Similarity=0.381 Sum_probs=179.6
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++++. ++.+|+|+|+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCc
Confidence 5677776652 34699999999999999999999999999999999998653 47999999986532
Q ss_pred --cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 925 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.++|.+..++.++ .|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLVK-----TYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCChh-----hCCHHHHH
Confidence 2234579999999998899999999988754431 2233345568899999999887777654 69999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57778999999985 899988875
No 112
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-37 Score=339.15 Aligned_cols=209 Identities=26% Similarity=0.423 Sum_probs=176.9
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4677776552 3469999999999999999999999999999999999865 358999999987643
Q ss_pred cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000529 925 ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRL 1004 (1441)
Q Consensus 925 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv 1004 (1441)
..++.++|++|++.+++.+|++||+.+....+. ......++.++++++.+++.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345679999999998889999999988655432 223344566889999999988777654 46999999999
Q ss_pred HHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1005 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1005 ~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999877899999999986 46778999999985 7887654
No 113
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.7e-37 Score=339.46 Aligned_cols=210 Identities=26% Similarity=0.387 Sum_probs=177.1
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5677776653 2469999999999999999999999999999999999865 347999999987643
Q ss_pred c-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 925 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..++ .||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKPK-----QLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCChh-----hCCHHHHHH
Confidence 2 22457999999998888899999998865432 12334445568889999999887777653 699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999986 57778999999985 7888875
No 114
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-38 Score=322.48 Aligned_cols=207 Identities=26% Similarity=0.354 Sum_probs=183.2
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcccc----ceEEEEeccCCCCC
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETF----ARISGYCEQNDIHS 941 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~----~~~~gyv~Q~~~~~ 941 (1441)
++++++++|||+.|++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++.... +.-+||+||++..|
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567899999999999999999999999999999999998764 47999999998865332 23489999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000529 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDE 1021 (1441)
-.+||+||+......+.. +....+++++++++|+.+++.|+++++.. .||||||+|+.|||||+.+|+.++|||
T Consensus 92 r~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~fiLLDE 165 (243)
T COG1137 92 RKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPKFILLDE 165 (243)
T ss_pred hcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCCEEEecC
Confidence 999999999877666532 22334566678899999999999998743 599999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|++|+||-+...|.+.++.++++|..|++|-|... +....|||..++.+ |++..+|.+.
T Consensus 166 PFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 166 PFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred CccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 99999999999999999999999999999999987 78899999999985 8999999974
No 115
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8.9e-37 Score=356.63 Aligned_cols=214 Identities=27% Similarity=0.370 Sum_probs=182.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.+. ++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 477888887653 34699999999999999999999999999999999998653 479999999876
Q ss_pred Cc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 923 KQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
.. ...++.+||++|++.+++.+||+|++.+.+.... .+.+..++.++++++.++|.+..++.++ .|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHH
Confidence 32 2245679999999998899999999987554321 2333444567889999999888777754 599999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57788999999985 89999998
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 6
No 116
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-37 Score=344.61 Aligned_cols=207 Identities=30% Similarity=0.396 Sum_probs=176.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999998 9999999998765422 35799999999889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++.+.... . . .++....++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~-~--------~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTR-L--------S------------------------EEEIREIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccC-C--------C------------------------HHHHHHHHHHHHHHcCCchhhcCChhh
Confidence 999999999986432110 0 0 001123456789999998888888776
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+++|+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKK-ELGLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEecCHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999998754 23566777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988753
No 117
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=359.54 Aligned_cols=206 Identities=26% Similarity=0.384 Sum_probs=179.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999998 9999999999865432 35799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++....+.. . .+....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------K------------------------AEIKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999976543210 0 01123467789999999888888766
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~-~~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINR-ELGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 33567777899999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 118
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.5e-37 Score=360.92 Aligned_cols=204 Identities=25% Similarity=0.296 Sum_probs=179.0
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc---cc----ceEEEEeccCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---TF----ARISGYCEQNDI 939 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~ 939 (1441)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.++... .. ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456799999999999999999999999999999999998763 589999999886532 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000529 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1441)
Q Consensus 940 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlL 1019 (1441)
++|.+||+||+.|..... ..+.++..+++.++++.+||.+..++.++ .|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 23455566788999999999888887754 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1020 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
||||++||+.++..+++.++++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|++.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999999754 899999999986 57889999999974 8999999863
No 119
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.4e-37 Score=357.12 Aligned_cols=206 Identities=27% Similarity=0.381 Sum_probs=179.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875422 1357999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.++..+... .+....++++++.+||++..++.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998765443100 01123467789999999988988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998753 3 5677778999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 120
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-36 Score=343.42 Aligned_cols=215 Identities=27% Similarity=0.348 Sum_probs=179.0
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4667776552 3469999999999999999999999999999999999865 347999999987643
Q ss_pred cc----cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000529 925 ET----FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPE-------VNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1441)
Q Consensus 925 ~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 993 (1441)
.. .++.++|++|++.+++.+||+|++.+......... .......+.++++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 21 23458999999999999999999988754321110 012334556889999999988777664
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 469999999999999999999999999999999999999999999999877999999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 121
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=360.27 Aligned_cols=217 Identities=24% Similarity=0.291 Sum_probs=183.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|++++++.. .+++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5678888776411 1135799999999999999999999999999999999998763 4799999998764
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.+||++|++.+++.+||+||+.+....+. .+.++.+++++++++.+||.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 135679999999999999999999998765431 233445567889999999988877764 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
|||||||+|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99986
No 122
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-37 Score=363.94 Aligned_cols=206 Identities=26% Similarity=0.383 Sum_probs=180.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999865443 4679999999999999999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.|+.+..+.. ..+....++++++.+||++..++.+++
T Consensus 93 ~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------------------------------KEEINQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999986543210 001123467789999999888888876
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++++.++|+.+++.+++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~-~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHK-RLGRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-HhCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3356677789999999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 123
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=360.69 Aligned_cols=215 Identities=24% Similarity=0.360 Sum_probs=187.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488889887652 34699999999999999999999999999999999998763 479999999876
Q ss_pred Cc-cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
.. ...+|.+|||+|+..++|++||.||+.|+...+ ..+..+.+++++++++.++|.+..++.+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999986543 2344556677899999999998888764 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||+. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998654 899999999986 68899999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 63
No 124
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=342.58 Aligned_cols=217 Identities=28% Similarity=0.387 Sum_probs=180.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887653 2469999999999999999999999999999999999865 3479999999876
Q ss_pred Ccc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 923 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
... ..++.++|++|++.+++.+||+||+.+....+.. .........+.++++++.++|.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 2245699999999888889999999886543211 00122333456788999999987777664 3699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999875 899999999986 47788999999975 8999998
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 125
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-37 Score=373.05 Aligned_cols=210 Identities=23% Similarity=0.407 Sum_probs=173.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIG 239 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1441)
++.+||+|+|++|+|||.|||+|||||||||+.++|..+++|+ +|+|++||+|+.++++ ++.+|+|.|+|.+|.
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs 555 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS 555 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec
Confidence 5678999999999999999999999999999999999999999 9999999999998876 478999999998876
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
-||+|||.|+... . +.|+.+.++.. .+.-=-+.++++.+||.||+
T Consensus 556 -~sI~eNI~YG~~~--~-----------------------t~e~i~~AAk~--------ANah~FI~~~p~gY~T~VGE- 600 (716)
T KOG0058|consen 556 -GSIRENIAYGLDN--A-----------------------TDEEIEAAAKM--------ANAHEFITNFPDGYNTVVGE- 600 (716)
T ss_pred -ccHHHHHhcCCCC--C-----------------------CHHHHHHHHHH--------hChHHHHHhCccccccccCC-
Confidence 5999999998641 1 11111111110 11111234789999999997
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
.+-.||||||||++|||||+++|+||||||.||+||+.+...+.+.|.+..+ + .+|++|.|.. .+.+.+|+|++++
T Consensus 601 kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~-rTVlvIAHRL-STV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 601 KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--G-RTVLVIAHRL-STVRHADQIVVID 676 (716)
T ss_pred ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--C-CeEEEEehhh-hHhhhccEEEEEc
Confidence 4445999999999999999999999999999999999999999999987643 3 5555566654 5678899999999
Q ss_pred CCeEEEEcCHHHHHH
Q 000529 400 DGQIVYQGPRELVLE 414 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1441)
+|++++.|+++|+++
T Consensus 677 ~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 677 KGRVVEMGTHDELLS 691 (716)
T ss_pred CCeEEecccHHHHhh
Confidence 999999999999874
No 126
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=362.64 Aligned_cols=215 Identities=26% Similarity=0.362 Sum_probs=184.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++++. ++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367888887652 34699999999999999999999999999999999998763 479999999876
Q ss_pred Ccc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
... ..++.+||++|+..+++.+||+||+.|....+. .+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 432 234679999999999999999999998765431 234455567899999999998887765 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 57889999999985 89999998
Q ss_pred CC
Q 000529 1081 LG 1082 (1441)
Q Consensus 1081 ~~ 1082 (1441)
+.
T Consensus 218 ~~ 219 (369)
T PRK11000 218 PL 219 (369)
T ss_pred HH
Confidence 63
No 127
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.7e-36 Score=341.78 Aligned_cols=212 Identities=26% Similarity=0.358 Sum_probs=178.9
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4667776652 34699999999999999999999999999999999998653 47999999987542
Q ss_pred c---c-cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 925 E---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 925 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
. . .++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..++.+ ..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23468999999999999999999987643321 223344556789999999988777664 4699999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999986 58889999999985 89999887
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 128
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.7e-36 Score=353.79 Aligned_cols=212 Identities=25% Similarity=0.379 Sum_probs=183.6
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++++. ++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788877652 3569999999999999999999999999999999999866 35899999998764
Q ss_pred c--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 924 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..++++++++.+||.+..++.++ .||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHHH
Confidence 3 2345679999999999999999999998776542 2334445568899999999998887754 5999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999965 799999999986 68889999999985 899999986
No 129
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.3e-36 Score=339.23 Aligned_cols=215 Identities=28% Similarity=0.417 Sum_probs=179.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 4677887765311 0112699999999999999999999999999999999998653 4799999998764
Q ss_pred c--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 924 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
. ..+++.++|++|++.+++.+||+||+.+....+. ....+..+.++++++.+|+.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 2345679999999988898999999987654431 233445567889999999988777764 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999877999999999986 57788999999985 7887654
No 130
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.2e-35 Score=371.62 Aligned_cols=214 Identities=29% Similarity=0.433 Sum_probs=178.7
Q ss_pred CCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcC
Q 000529 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG 919 (1441)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 919 (1441)
-...++|+|++|.+.. ++..+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +..|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457999999999863 23369999999999999999999999999999999999876 3589999999
Q ss_pred ccCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccc
Q 000529 920 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-------LRQSLVG 989 (1441)
Q Consensus 920 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg 989 (1441)
.+... ..+|+.+|||+|++.++. -|++||+.++. ++.+.+ .+.++++..|..+ -.|+.+|
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhcccccccccc
Confidence 98754 457899999999998875 69999997652 223322 2344444444433 3466777
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 990 ~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
+.| .+||||||||++|||||+++|+||+||||||+||+++.+.|++.|.++. .|+|+|+++|+++ ..+.+|++++|
T Consensus 605 E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 644 4799999999999999999999999999999999999999999999986 4799999999985 67899999999
Q ss_pred ecCcEEEEEcCC
Q 000529 1070 KRGGREVYVGPL 1081 (1441)
Q Consensus 1070 ~~gG~~v~~G~~ 1081 (1441)
+ +|+++..|+.
T Consensus 681 ~-~Gkiv~~gs~ 691 (709)
T COG2274 681 D-QGKIVEQGSH 691 (709)
T ss_pred c-CCceeccCCH
Confidence 8 5899999996
No 131
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-36 Score=363.12 Aligned_cols=218 Identities=27% Similarity=0.359 Sum_probs=184.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.+. ++.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 367888887652 35799999999999999999999999999999999998663 479999999876
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.+||++|+..+++.+||+|++.++...... .....+..+++++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 23567799999999988899999999876422110 01112334567899999999998888765 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
|||||+.|||||+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999985 899999
Q ss_pred cCCC
Q 000529 1079 GPLG 1082 (1441)
Q Consensus 1079 G~~~ 1082 (1441)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9874
No 132
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-36 Score=336.05 Aligned_cols=206 Identities=29% Similarity=0.394 Sum_probs=174.5
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4677776552 2469999999999999999999999999999999999865 358999999987643
Q ss_pred -cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 925 -ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 925 -~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2335679999999988889999999988654321 1 1345788999999988777764 3599999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999877899999999986 46678999999985 7888765
No 133
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-36 Score=338.50 Aligned_cols=208 Identities=29% Similarity=0.402 Sum_probs=172.0
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 567777665310 011569999999999999999999999999999999999865 347999999987643
Q ss_pred cc-------cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 925 ET-------FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 925 ~~-------~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24579999999999999999999998765432 223334556889999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++ |+
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRD-GK 217 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeC-Cc
Confidence 9999999999999999999999999999999999999999999987 5899999999986 34 48999999986 54
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.8e-36 Score=340.36 Aligned_cols=213 Identities=24% Similarity=0.290 Sum_probs=176.4
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCC-----CCceEEEEEEEcC
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGDIRISG 919 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g 919 (1441)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4667776542 246999999999999999999999999999999999976 4 4579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.+... ...++.++|++|++.++ .+||+||+.+....+. .......+++++++++.+|+.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 22456799999998877 7999999988654331 11222234567899999999877665431 24
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||+++ .+.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 69999999999999999999999999999999999999999999999876 99999999986 57778999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9999875
No 135
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.4e-36 Score=337.60 Aligned_cols=221 Identities=38% Similarity=0.617 Sum_probs=180.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC-CceEEEEEEEcCccC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGDIRISGYPK 922 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 922 (1441)
+.|+|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577777766321 013579999999999999999999999999999999999764 123579999999876
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEE-VMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
.....++.++|++|++.+++.+||+||+.|......+...........+++ .++.+++.+..++.+ +.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544456779999999999999999999998765433222122222334555 899999987776654 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999999877899999999985468899999999985 8988765
No 136
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-37 Score=328.48 Aligned_cols=208 Identities=27% Similarity=0.369 Sum_probs=181.4
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccc----cceEEEEeccCCCCC
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQET----FARISGYCEQNDIHS 941 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~ 941 (1441)
.+...+++|||+++++||++||+||||||||||+|+|+|..++ ..|+|.++|.++.... .+.-++--+|...++
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3678899999999999999999999999999999999998764 4799999999876432 234578889999999
Q ss_pred CCCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh
Q 000529 942 PFVTVYESLFYSAWLRL--------PPE-VNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVA 1012 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~ 1012 (1441)
+.+||.||+..++..+. +.. ...++..+++.++|+.+||.+.+|.+.| +||+||||||.|||||+.
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~ 166 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALAT 166 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhc
Confidence 99999999988765331 111 1234556678899999999999999876 499999999999999999
Q ss_pred CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1013 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1013 ~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
+|++|+||||.+||.+....++.+.|+++.++ |.||+++-||++. ++.+||||++|+. |+++..|++.
T Consensus 167 ~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 167 QPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 99999999999999999999999999999874 7999999999985 8999999999985 8999999984
No 137
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.6e-36 Score=360.39 Aligned_cols=216 Identities=27% Similarity=0.421 Sum_probs=182.4
Q ss_pred CceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCc
Q 000529 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY 920 (1441)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 920 (1441)
...++|+||+|+|+.. ++.++|+|+||+|+|||.+||+||||+||||+.++|..... +.+|.|.+||.
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 3479999999999864 35689999999999999999999999999999999998765 45899999999
Q ss_pred cCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH-----HHHHHcCCcccccccccCCC
Q 000529 921 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIE-----EVMELVELKPLRQSLVGLPG 992 (1441)
Q Consensus 921 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~-----~~l~~l~L~~~~~~~vg~~~ 992 (1441)
|+++ ..+++++|+|.|+|.++. -||+||+.|+.. ..+.++.....+ +.+ .++.+-.|+.||..|
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKG 602 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCcc
Confidence 9865 346789999999999986 699999999753 233333322221 122 255666899999876
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
. .||||||||++|||||++||+||||||+||+||+++...|.++|.++.+ ++|||++.|..+ ..+.+|+|+++++
T Consensus 603 ~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~- 677 (716)
T KOG0058|consen 603 S-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK- 677 (716)
T ss_pred c-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-
Confidence 5 5999999999999999999999999999999999999999999998865 699999999976 5788999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|.-
T Consensus 678 G~V~E~G~h 686 (716)
T KOG0058|consen 678 GRVVEMGTH 686 (716)
T ss_pred CeEEecccH
Confidence 899999964
No 138
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-36 Score=354.87 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=179.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+.+|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999876432 2467999999998999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.....+.. . .+....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMS----------T------------------------REIEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhCCChhh----
Confidence 999999765443210 0 01122356688999999999998876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.. .+++|+.++|+.+++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998754 35677778999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
++++|+++++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 139
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=342.51 Aligned_cols=204 Identities=29% Similarity=0.337 Sum_probs=170.7
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc------ccceEEEEeccCCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------TFARISGYCEQNDIHSP 942 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~~~~~ 942 (1441)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4699999999999999999999999999999999998653 479999999876421 23567999999999889
Q ss_pred CCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCee
Q 000529 943 FVTVYESLFYSAWLRL-----PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSII 1017 (1441)
Q Consensus 943 ~lTv~E~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iL 1017 (1441)
.+||+||+.+...... ..........+.++++++.++|.+..++.+ ..|||||||||+||+||+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 001111233456788999999987766654 469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1018 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1018 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999987 57778999999985 899999875
No 140
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=348.50 Aligned_cols=218 Identities=27% Similarity=0.405 Sum_probs=180.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-----ccceEEEEcCCCC-CC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN-HI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1441)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999998 999999999986532 2367999999853 44
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc--ccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD--ICADTMV 316 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1441)
..+||+||+.|+....+.. .++....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccCCc
Confidence 5689999999865432210 111223467889999997 5677776
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ ||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++|+.++|+.+++.++||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHK-EYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 65 999999999999999999999999999999999999999999998754 346777888999999999999999
Q ss_pred EecCCeEEEEcCHHHHHH---HHHhcCCCCCC
Q 000529 397 LLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1441)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 141
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.7e-36 Score=334.87 Aligned_cols=192 Identities=29% Similarity=0.384 Sum_probs=163.1
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCC-CCCCCCHH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDI-HSPFVTVY 947 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 947 (1441)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999865 358999999987644344567999999974 33467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCC
Q 000529 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1441)
Q Consensus 948 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD 1027 (1441)
||+.+..... . . ..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754322 1 1 1245788999999998877764 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 1028 ~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999877999999999986 46678999999985 6764
No 142
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-36 Score=339.49 Aligned_cols=217 Identities=25% Similarity=0.308 Sum_probs=180.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++.. .+.+++|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4577777665310 0113699999999999999999999999999999999998763 4799999998764
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124679999999999999999999988654331 233344556889999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 56778999999975 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98875
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=348.38 Aligned_cols=218 Identities=21% Similarity=0.303 Sum_probs=180.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67888887763210 0124699999999999999999999999999999999998763 4899999998864
Q ss_pred cc-----ccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCc
Q 000529 924 QE-----TFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK--PLRQSLVGLPGVNG 995 (1441)
Q Consensus 924 ~~-----~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 995 (1441)
.. ..++.+||++|++. .+...||+|++.|..... ..+.++..++++++++.+||. +..++.+ ..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 31 34567999999863 333579999998865432 234555566789999999997 5566653 46
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999865 899999999986 46678999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999986
No 144
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.9e-36 Score=339.59 Aligned_cols=214 Identities=22% Similarity=0.338 Sum_probs=180.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46778776652 2469999999999999999999999999999999999865 35799999998764
Q ss_pred c-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 924 Q-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 924 ~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
. ...++.++|++|++.+++.+||+||+.+...... .....+.++.+.++++.+||.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 1235679999999988889999999987642111 1233444566889999999987777664 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 46678999999985 899999
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 145
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-36 Score=335.30 Aligned_cols=200 Identities=29% Similarity=0.446 Sum_probs=170.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999998 9999999998764332 3579999999888889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.++....+.. . .+....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------K------------------------AEIRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99999865432110 0 00112356789999999888888766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. ..+++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQR-ELGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3356677789999999999999999999999
Q ss_pred EEEc
Q 000529 404 VYQG 407 (1441)
Q Consensus 404 v~~G 407 (1441)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 146
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-36 Score=337.31 Aligned_cols=205 Identities=28% Similarity=0.391 Sum_probs=175.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHIG 239 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999998 9999999998765321 357999999998899
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
.+||+||+.+.....+.. ..+....++.+++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------------------------------KAEIEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhhhhcChhh-
Confidence 999999999865432210 001122356789999999888877765
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. .++++|++++|+.+++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINR-ELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 335677778888999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 147
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-36 Score=346.31 Aligned_cols=204 Identities=26% Similarity=0.306 Sum_probs=174.0
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc---c----cceEEEEeccCC
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T----FARISGYCEQND 938 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~ 938 (1441)
++.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3456799999999999999999999999999999999998653 479999999875421 1 135699999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000529 939 IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 1018 (1441)
Q Consensus 939 ~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLl 1018 (1441)
.+++.+||+||+.+...... .......+.++++++.++|.+..++.++ .||||||||++|||||+.+|+||+
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lAral~~~p~ill 183 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRVGLARALAVDPDILL 183 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEE
Confidence 98989999999988754321 2233445568899999999887777654 699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1019 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1019 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 184 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 184 MDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999999754 899999999986 57788999999985 899998875
No 148
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.6e-36 Score=336.27 Aligned_cols=213 Identities=25% Similarity=0.386 Sum_probs=178.4
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++. +++++|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 56777766521 11469999999999999999999999999999999999865 357999999987643
Q ss_pred --cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 925 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
...++.++|++|++.+++..|++||+.+....+. ...+...+.++++++.++|.+..++.+ ..||+||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999988889999999988654432 223334456889999999987777664 369999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999876 699999999986 46678999999985 899998875
No 149
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-36 Score=336.43 Aligned_cols=217 Identities=25% Similarity=0.321 Sum_probs=179.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++.. ...+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37888988876321 012469999999999999999999999999999999999865 3589999999876
Q ss_pred Cccc------c-ceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000529 923 KQET------F-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1441)
Q Consensus 923 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 995 (1441)
.... . ++.++|++|++.+++.+|++||+.+....+ ....++.+++++++++.+||.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4311 1 256999999998888899999998865432 1223344567889999999988777654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||||++||+||+.+|+||+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999975 5899999999986 34 45689999974 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998886
No 150
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=313.93 Aligned_cols=217 Identities=26% Similarity=0.383 Sum_probs=182.5
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++.+|++|++. ++.+|++||++++|||++||+||||||||||||.|+|...+ ..|++.++|.+..
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 46678888863 46799999999999999999999999999999999997763 4799999999875
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
. ....+.-+..+|+..+....||+|-+.++..-... .....+..+.++++|+..++.+++.+. ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 4 34566779999999887778999999987432211 112224445678999999999988765 34699999
Q ss_pred HHHHHHHHHHhh------CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 1001 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 1001 rqRv~iA~aL~~------~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|+|++|+ +||
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCe
Confidence 999999999975 456999999999999999999999999999999999999999985 678899999998 489
Q ss_pred EEEEcCCCC
Q 000529 1075 EVYVGPLGH 1083 (1441)
Q Consensus 1075 ~v~~G~~~~ 1083 (1441)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999999854
No 151
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-37 Score=317.35 Aligned_cols=210 Identities=22% Similarity=0.369 Sum_probs=184.0
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc----ceEEEEcCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1441)
+++++++|||+.+++||+++++|||||||||.+.++.|+..|+ +|+|.+||.+++.++.. .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567999999999999999999999999999999999999999 99999999999887653 3589999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
-.+||+|||.-..+.+... .+..+.+.+.+.+|+.|+|.|++|..-..
T Consensus 92 r~LtV~dNi~~vlE~~~~d--------------------------------~~~~~~~~~l~~LL~ef~i~hlr~~~a~s 139 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKD--------------------------------LKKAERKEELDALLEEFHITHLRDSKAYS 139 (243)
T ss_pred hcCcHHHHHHHHHhhhhcc--------------------------------hhHHHHHHHHHHHHHHhchHHHhcCcccc
Confidence 9999999999776544210 01122344578899999999999987655
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||+|+.|||||+.+|+.++||||++|.||-+..+|.+.++.+.. .+.-|++.-|...|+.+++||.+++
T Consensus 140 -----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 140 -----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred -----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 999999999999999999999999999999999999999999998754 4566666789999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 000529 399 SDGQIVYQGPRELVLE 414 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1441)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 152
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=337.61 Aligned_cols=210 Identities=28% Similarity=0.418 Sum_probs=176.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999987 9999999998764432 3579999999888889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.++....+...+ + + ..+....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~--~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------P--P-----------EAEIRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------C--C-----------HHHHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 9999987543211000 0 0 001122456789999998888887766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++. ..+.+|+.++|+.+++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHD-ELHVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 999999999999999999999999999999999999999999998754 3355677788888999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 153
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-36 Score=335.60 Aligned_cols=205 Identities=30% Similarity=0.396 Sum_probs=175.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999998 999999998875321 1357999999998899999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+..+..+.. ..+....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVP----------------------------------GAERRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCChhh----
Confidence 999999875433210 001123467789999999888888876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+++|++++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE-EFGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999998754 335667778999999999999999999999
Q ss_pred EEEEcCHHHH
Q 000529 403 IVYQGPRELV 412 (1441)
Q Consensus 403 iv~~G~~~~~ 412 (1441)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987753
No 154
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=345.58 Aligned_cols=225 Identities=28% Similarity=0.388 Sum_probs=183.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC-------CccceEEEEcCCC-C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1441)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 95 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPES 95 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcch
Confidence 35999999999999999999999999999999999999998 99999999997531 1135799999985 2
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
.+...||.||+.|+.+..+.. ..+...++.++++.+||. ...++.
T Consensus 96 ~l~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~ 141 (288)
T PRK13643 96 QLFEETVLKDVAFGPQNFGIP----------------------------------KEKAEKIAAEKLEMVGLADEFWEKS 141 (288)
T ss_pred hcccchHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhccCC
Confidence 444579999999976543210 011223467789999996 466766
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+.+|++++|+.+++.++||+|
T Consensus 142 ~~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri 214 (288)
T PRK13643 142 PFE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYV 214 (288)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEE
Confidence 655 999999999999999999999999999999999999999999988753 3567777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH---HHHHhcCCCCCCCCChhhHH
Q 000529 396 ILLSDGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~adfl 433 (1441)
++|++|+++++|+++++. +.++..|+.+|.....++.+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 999999999999999874 34556777776654444433
No 155
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.3e-36 Score=348.92 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=177.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999998 999999999875322 2467999999998899999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.....+.. . .+....++.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMS----------T------------------------REIEAVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhHhcCchhh----
Confidence 999998754432210 0 00112356688999999988988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998754 35677778999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+++.|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 156
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4e-36 Score=334.37 Aligned_cols=205 Identities=26% Similarity=0.336 Sum_probs=172.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46778777652 12469999999999999999999999999999999999865 34799999998764
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. .+++.++|++|++.+++.+|+.||+.+....+. ...+..++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988889999999988754331 223344567889999999987766654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD 212 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC
Confidence 99999999999999999999999999999999999999999999877999999999986 57778999999985
No 157
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-36 Score=313.84 Aligned_cols=207 Identities=30% Similarity=0.433 Sum_probs=178.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc---ceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1441)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|++||++++.+.+. +.-|..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999888764 5678999998888889
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+|-+.++..-.+.+.. ..+...+++.+|...++.+.+.+..-
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~R~y~---- 134 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAGRDYR---- 134 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhccchh----
Confidence 999999998654322110 01223457778889999888877654
Q ss_pred cCCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 322 RGVSGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~------~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
.|||||||||.+||.|+. ++++||||||||+||..-...+++..|++++. +..|+.+.|+.+.+..+||+|
T Consensus 135 -~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 135 -TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred -hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhee
Confidence 499999999999999974 45699999999999999999999999999873 366777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999886
No 158
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.2e-36 Score=340.98 Aligned_cols=214 Identities=28% Similarity=0.375 Sum_probs=179.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.+. ++.+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67888887653 24699999999999999999999999999999999998653 4799999998753
Q ss_pred c-----------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000529 924 Q-----------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1441)
Q Consensus 924 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 992 (1441)
. ...++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.+||.+..++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1234579999999988888999999987543211 1233444566889999999987766654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 899998875
No 159
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=320.78 Aligned_cols=204 Identities=24% Similarity=0.382 Sum_probs=186.5
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCC
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
.+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|.|.++|.+.+.. .+.++||.|.+.-++|.+|
T Consensus 12 Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 12 FGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMT 88 (300)
T ss_pred cCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCc
Confidence 467889999999999999999999999999999999999876 3589999999988654 3556999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
|.|.|.|-|.++. ++.++.++.++.+|+.+++......++ +.||-|++|++.+-.+++++|++++||||+||
T Consensus 89 v~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSG 160 (300)
T COG4152 89 VEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSG 160 (300)
T ss_pred HHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccC
Confidence 9999999999873 566777788999999999999888775 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|||.+.+.+-+.+.+++++|.|||+++|+++ .+-++||++++|++ |+.|.+|+..
T Consensus 161 LDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 161 LDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred CChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 9999999999999999999999999999997 68899999999985 8999999873
No 160
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-36 Score=333.15 Aligned_cols=200 Identities=29% Similarity=0.410 Sum_probs=171.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999987 9999999998763 246799999998888889999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||+.++....+.. . .+....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVP----------K------------------------AEARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 9999875432210 0 00112456789999998888887765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~--~G~ 402 (1441)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWR-ETGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999998754 335667778888899999999999999 799
Q ss_pred EEEEcCH
Q 000529 403 IVYQGPR 409 (1441)
Q Consensus 403 iv~~G~~ 409 (1441)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9998865
No 161
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=320.61 Aligned_cols=203 Identities=29% Similarity=0.403 Sum_probs=173.4
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQNDIHSP 942 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 942 (1441)
++.++|++||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.+++.. ..++-++||||....||
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 557899999999999999999999999999999999998763 479999999997642 23556999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000529 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVE-LKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1441)
Q Consensus 943 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDE 1021 (1441)
.+||+|||..++..+.. ++..+..++++.+.+- |.+.++++.| .|||||||.++|||||+++|++|+|||
T Consensus 92 ~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDE 162 (237)
T COG0410 92 RLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDE 162 (237)
T ss_pred hCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999987654421 1122222677888874 6677777766 499999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1022 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
||.||-|.-.++|.+.|+++.++ |.||+++-+... ...+.+|+.++|.+ |++++.|+..
T Consensus 163 Ps~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 163 PSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred CccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 99999999999999999999866 779999988875 47788999999985 8999999964
No 162
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-36 Score=339.79 Aligned_cols=212 Identities=27% Similarity=0.349 Sum_probs=178.5
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 46777776652 24699999999999999999999999999999999998653 4799999998764
Q ss_pred ccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 924 QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 924 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
. ..+.+||++|++.+++.+||.||+.+....+ .....+.++.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998765432 1233344556889999999987777654 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEec-CcEEEEEcCC
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGREVYVGPL 1081 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~-gG~~v~~G~~ 1081 (1441)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ .+.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999984 5899988765
No 163
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=4.9e-36 Score=333.72 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=172.8
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4667776652 12469999999999999999999999999999999999865 347999999987542
Q ss_pred c------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 925 E------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 925 ~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
. ..++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+|+.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 235679999999999999999999988754332 233444566889999999988777664 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999777999999999986 46678999999985 54
No 164
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=339.17 Aligned_cols=201 Identities=28% Similarity=0.380 Sum_probs=172.0
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---cccceEEEEeccCCCCCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
+.+|+|+|++|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4699999999999999999999999999999999998653 47999999987542 233567899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP--LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPT 1023 (1441)
++||+.+...++. ...+...+.++++++.+++.+ ..++.+ +.|||||||||+|||||+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRYP-----HELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654431 233444566889999999985 556553 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1024 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1024 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999999765 899999999986 57788999999985 899998875
No 165
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.4e-36 Score=336.09 Aligned_cols=199 Identities=31% Similarity=0.449 Sum_probs=168.1
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc---c-cceEEEEeccCCCCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T-FARISGYCEQNDIHSPFV 944 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~~~~~~~l 944 (1441)
+.+|+|+||++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4699999999999999999999999999999999998653 479999999876432 1 245699999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000529 945 TVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-ELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1441)
Q Consensus 945 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPT 1023 (1441)
|++||+.+...... ....++.+.++++.+ ++.+..++.+ ..||||||||++|||||+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334566778887 4666666553 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1024 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1024 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999986 57788999999985 899988875
No 166
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-36 Score=343.00 Aligned_cols=208 Identities=25% Similarity=0.354 Sum_probs=177.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1441)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3457999999999999999999999999999999999999998 9999999998764321 24699999999
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1441)
.+++.+||+||+.++....+.. . .+....++++++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVP----------R------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 8888999999999875432210 0 01112356789999999888888
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.. ..+.+|++++|+.+++.+++|++
T Consensus 158 ~~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PDE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQA-ELQKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEE
Confidence 876 999999999999999999999999999999999999999999998764 33566777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 167
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.5e-36 Score=342.44 Aligned_cols=215 Identities=20% Similarity=0.302 Sum_probs=180.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478889887652 34699999999999999999999999999999999998653 479999999875
Q ss_pred Ccc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000529 923 KQE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1441)
Q Consensus 923 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 996 (1441)
... ..++.++|++|+..+++.+|+.||+.+...... ..+.+..++.+.++++.++|.+..++.+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134569999999988889999999987643221 1223334456788999999988777764 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 997 SgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999986 57788999999985 899
Q ss_pred EEEcCC
Q 000529 1076 VYVGPL 1081 (1441)
Q Consensus 1076 v~~G~~ 1081 (1441)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 168
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=331.03 Aligned_cols=222 Identities=25% Similarity=0.351 Sum_probs=196.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1441)
...-++|+|++++.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++...+. ++.+++|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999998 9999999999876653 367999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
++|+.||.||..|+.+.+|++. ++.+.++.+.|+..||+..++.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPK----------------------------------AEREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhhcCc
Confidence 9999999999999999988632 223455778899999999999998
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
.+ ||||+||||.+||||+.+|+||+||||+|+|||--+.++.+.|.++-.. -+.+|+.++|+.+|++++.|||.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~-l~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAK-LKKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHH-hCCeEEEEecCHHHHHhccceEE
Confidence 77 9999999999999999999999999999999999999999888777554 45667779999999999999999
Q ss_pred EecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhhHHHhh
Q 000529 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~~v 436 (1441)
+|.+|+||..|+++|++. .|...-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999973 46666667777654
No 169
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=343.94 Aligned_cols=215 Identities=25% Similarity=0.343 Sum_probs=180.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++..+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 367888887663 123599999999999999999999999999999999998653 479999999876
Q ss_pred Cc---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.+||++|++. .++..||.||+.|..... .......++.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223467999999863 345689999998864322 2333444566889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46688999999975 899999
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 170
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.4e-36 Score=341.71 Aligned_cols=218 Identities=25% Similarity=0.280 Sum_probs=177.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 45677776542 134699999999999999999999999999999999998653 4799999998754
Q ss_pred c------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000529 924 Q------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRL-----PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1441)
Q Consensus 924 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 992 (1441)
. ..+++.++|++|++.+++.+||+||+.+...... .........+++++++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 1235679999999988899999999976431100 000112233456888999999987777654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 469999999999999999999999999999999999999999999999764 899999999986 46788999999985
Q ss_pred CcEEEEEcCCC
Q 000529 1072 GGREVYVGPLG 1082 (1441)
Q Consensus 1072 gG~~v~~G~~~ 1082 (1441)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 8999888763
No 171
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.7e-36 Score=337.27 Aligned_cols=215 Identities=27% Similarity=0.397 Sum_probs=177.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999987 9999999998865432 2459999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++....+.. . .... . . .....+....++++++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~-~------~~~~---~---~-----------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGS-G------LLLA---R---A-----------RREEREARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhcccc-c------cccc---c---c-----------cccHHHHHHHHHHHHHHcCccchhhCChhh--
Confidence 99999999875432110 0 0000 0 0 000011223467789999999888887766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.. . +.+|+.++|+.+++.+++|+|++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998754 3 55677788999999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 172
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.19 Aligned_cols=205 Identities=24% Similarity=0.341 Sum_probs=174.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCC-CCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD-NHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1441)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999998 9999999999865332 35799999986 36778
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+|||.|+.+..+.. .++....++++++.+||++..+..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------------------------------HEEMKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999999875432210 011123467789999999888888766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++ ..+|+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRD-DYQMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3356677788888888 58999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999998775
No 173
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=346.84 Aligned_cols=218 Identities=24% Similarity=0.369 Sum_probs=178.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC-------CccceEEEEcCCC-C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1441)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999998 99999999987531 1135799999985 2
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
.+...||+||+.|+.+..+.. .++....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhhCC
Confidence 444679999999875432210 011123467789999997 567777
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~-~~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHK-EKGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEE
Confidence 765 999999999999999999999999999999999999999999998754 33567777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH---HHHHhcCCCCCC
Q 000529 396 ILLSDGQIVYQGPRELVL---EFFESMGFKCPK 425 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 425 (1441)
++|++|+++++|+++++. +.+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999998874 233344554443
No 174
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=346.55 Aligned_cols=218 Identities=25% Similarity=0.290 Sum_probs=179.5
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|++++++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889988874210 0124599999999999999999999999999999999998663 4799999998763
Q ss_pred c-------cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000529 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 994 (1441)
. ...++.+|||+|++. .+...||+||+.|+.... ..+.++.+++++++++.++|. +..++.+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 134567999999863 233479999998875432 233444556789999999996 5566653 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|+ +|
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KG 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 69999999999999999999999999999999999999999999999765 899999999986 5778899999998 58
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999985
No 175
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=347.54 Aligned_cols=218 Identities=24% Similarity=0.304 Sum_probs=179.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67889988874210 0123599999999999999999999999999999999998664 4699999886531
Q ss_pred ---------------------------ccccceEEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000529 924 ---------------------------QETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVM 975 (1441)
Q Consensus 924 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l 975 (1441)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356799999985 3344579999998875432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Q 000529 976 ELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1054 (1441)
Q Consensus 976 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~ 1054 (1441)
+.+||. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5666654 4699999999999999999999999999999999999999999999998779999999999
Q ss_pred CcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1055 PSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1055 ~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
++ .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 47789999999975 899999986
No 176
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=331.25 Aligned_cols=208 Identities=34% Similarity=0.487 Sum_probs=174.5
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCcccc
Confidence 4677776552 246999999999999 9999999999999999999998653 48999999987543
Q ss_pred --cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 925 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
...++.++|++|++.+++.+||.||+.+....+. ...++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 1235679999999999999999999988655431 222334556889999999988777664 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46678999999985 7888764
No 177
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-35 Score=332.02 Aligned_cols=208 Identities=24% Similarity=0.310 Sum_probs=174.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 46778877652 12469999999999999999999999999999999999865 34799999998754
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.++|++|++.+++..|++||+.+....+ ....++..+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567999999998888899999998865433 1233344456788999999988777654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 46678999999985 665
No 178
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-35 Score=376.46 Aligned_cols=216 Identities=31% Similarity=0.452 Sum_probs=180.1
Q ss_pred CCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcC
Q 000529 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG 919 (1441)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 919 (1441)
....++|+||+|+++.. ++..+|+|+|+.|++|+.+||+|||||||||++++|.+... +.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsR----------pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSR----------PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCC----------CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 34579999999998754 34579999999999999999999999999999999999766 4589999999
Q ss_pred ccCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-------CCccccccccc
Q 000529 920 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-------ELKPLRQSLVG 989 (1441)
Q Consensus 920 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-------~L~~~~~~~vg 989 (1441)
.+++. ..++.++|.|.|+|.++ ..|++||+.|+- ++.+.++ ++++.+.. .|.+-.|+.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~~~----i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATREE----IEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccHHH----HHHHHHHccHHHHHHhhHHhhccccc
Confidence 98754 34677899999999777 479999998752 2333332 33333333 34455678888
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 990 ~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
..++. ||||||||++|||||+++|+|||||||||+||+++...|+++|++.. .|+|.|+++|+.| .+ +.+|++++|
T Consensus 485 e~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS-tI-rnaD~I~v~ 560 (1228)
T KOG0055|consen 485 ERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS-TI-RNADKIAVM 560 (1228)
T ss_pred CCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh-hh-hccCEEEEE
Confidence 77664 99999999999999999999999999999999999999999998875 5999999999987 34 559999999
Q ss_pred ecCcEEEEEcCCC
Q 000529 1070 KRGGREVYVGPLG 1082 (1441)
Q Consensus 1070 ~~gG~~v~~G~~~ 1082 (1441)
++ |++++.|...
T Consensus 561 ~~-G~IvE~G~h~ 572 (1228)
T KOG0055|consen 561 EE-GKIVEQGTHD 572 (1228)
T ss_pred EC-CEEEEecCHH
Confidence 85 8999999863
No 179
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-35 Score=330.67 Aligned_cols=200 Identities=30% Similarity=0.433 Sum_probs=171.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35899999999999999999999999999999999999987 9999999998764432 3579999999888889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.++.+..+.. ..+....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------------------------------KDEIDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 99999875432210 001122456789999999888888876
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+.+|++++|+.+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQR-LGTTTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987643 356677788999999999999999999999
Q ss_pred EEEc
Q 000529 404 VYQG 407 (1441)
Q Consensus 404 v~~G 407 (1441)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 180
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-35 Score=334.14 Aligned_cols=217 Identities=24% Similarity=0.282 Sum_probs=172.0
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4677887765310 001369999999999999999999999999999999999865 34799999998764
Q ss_pred c------cccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000529 924 Q------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 994 (1441)
. ...++.++|++|++ .+.+.+||+||+.+......+. ...+..+..++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 13456799999998 4567899999998765433211 11111122235788999995 4556554 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 69999999999999999999999999999999999999999999999865 899999999986 46678999999985 7
Q ss_pred EEEEEc
Q 000529 1074 REVYVG 1079 (1441)
Q Consensus 1074 ~~v~~G 1079 (1441)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 181
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4e-36 Score=378.29 Aligned_cols=207 Identities=29% Similarity=0.423 Sum_probs=171.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1441)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++.+. |+.++||+|++.+ .+.|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~L-f~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFL-FSGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchh-hcCc
Confidence 6899999999999999999999999999999999999998 9999999999987765 5889999998755 5679
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.++... .+.++.+.|+...+. + -.+..++..+||.||+ ++.
T Consensus 563 I~eNi~l~~p~-------------------------~~~e~i~~A~~~ag~------~--~fI~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGNPE-------------------------ATDEEIIEAAQLAGA------H--EFIENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCCCC-------------------------CCHHHHHHHHHHhCc------H--HHHHhccccccccccc-CCC
Confidence 99999986421 122222222222111 1 1234688899999995 677
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|++.. .++|+|+ ++|. ..+.+.||+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~-IaHR-l~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVII-IAHR-LSTIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEE-EEcc-chHhhhccEEEEccCCc
Confidence 899999999999999999999999999999999999999999998863 3455555 4443 45788999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
++.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999875
No 182
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=354.74 Aligned_cols=207 Identities=22% Similarity=0.330 Sum_probs=179.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1441)
...+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999998 9999999999865432 247999999999
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
+++.+||+||+.|+.+..+... .+....++++++.+||++..++.+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999999765432110 011234567899999998888887
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
.+ |||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+++|+|+
T Consensus 163 ~~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~-~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 DE-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQA-KHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-HCCCeEEEEECCHHHHHHhCCEEE
Confidence 66 999999999999999999999999999999999999999999998754 335667778999999999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 000529 397 LLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999998774
No 183
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=344.34 Aligned_cols=218 Identities=24% Similarity=0.337 Sum_probs=179.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 57889988874110 0113599999999999999999999999999999999998663 4799999998863
Q ss_pred c-------cccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000529 924 Q-------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1441)
Q Consensus 924 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 993 (1441)
. ...++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..++. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 12456799999986 3444 69999999875432 234455566789999999996 455554 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 469999999999999999999999999999999999999999999999877999999999986 57788999999985 8
Q ss_pred EEEEEcCCC
Q 000529 1074 REVYVGPLG 1082 (1441)
Q Consensus 1074 ~~v~~G~~~ 1082 (1441)
++++.|++.
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999863
No 184
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.3e-35 Score=334.58 Aligned_cols=205 Identities=22% Similarity=0.368 Sum_probs=175.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999998 9999999998754332 2469999999989999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.+.....+.. ..+....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 133 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------------------------------KKEREEKLEELLEEFHITHLRKSKASS-- 133 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCChhh--
Confidence 99999999864322110 001123456789999999888887766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+|++.+|++|+|||||+|||..++..+.+.|+++.. .+++|+.++|+.+++.+++|+|++|++
T Consensus 134 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 134 ---LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 356677788999999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988753
No 185
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.8e-35 Score=333.97 Aligned_cols=212 Identities=28% Similarity=0.397 Sum_probs=176.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 45677776652 34699999999999999999999999999999999998653 4799999998754
Q ss_pred cc--ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 924 QE--TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 924 ~~--~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
.. ...+.++|++|++.+++.+|++||+.+....+ ....+...+.++++++.+||.+..++.++ .||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKVR-----ELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHH
Confidence 21 22356899999998888899999998765432 12333345567889999999887776644 6999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 34 45999999985 89999887
Q ss_pred C
Q 000529 1081 L 1081 (1441)
Q Consensus 1081 ~ 1081 (1441)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 186
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.6e-36 Score=332.34 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=165.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999988 9999999998765431 3579999999989
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++.+||+||+.++....+.. . .+....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------K------------------------KERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhcChh
Confidence 99999999999875433210 0 0011245678999999988888776
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++. ++|++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNK-EAGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCeEEEEECCHHHHh-hhcEEEE
Confidence 6 999999999999999999999999999999999999999999998754 23566777888888876 9999999
Q ss_pred ecCCeE
Q 000529 398 LSDGQI 403 (1441)
Q Consensus 398 L~~G~i 403 (1441)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 187
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.4e-36 Score=331.22 Aligned_cols=206 Identities=25% Similarity=0.344 Sum_probs=172.7
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 4677776652 24699999999999999999999999999999999998653 47999999987632
Q ss_pred -----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 925 -----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 925 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
...++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+|+.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 1245679999999998889999999987643111 1233344566889999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999985 54
No 188
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=331.98 Aligned_cols=201 Identities=23% Similarity=0.332 Sum_probs=169.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999987 9999999999865432 2469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++.+||+||+.+.....+.. . .+....++++++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------P------------------------AEINSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCChh
Confidence 99999999999865432110 0 0112345678999999988887776
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ |||||||||+||++++.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNR-LQGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-hCCCEEEEEeCCHHHHHh-hCEEEE
Confidence 5 999999999999999999999999999999999999999999998754 335667778888888766 589999
Q ss_pred ecCCeEEEEcCH
Q 000529 398 LSDGQIVYQGPR 409 (1441)
Q Consensus 398 L~~G~iv~~G~~ 409 (1441)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 189
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=347.63 Aligned_cols=218 Identities=24% Similarity=0.341 Sum_probs=179.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 488999998874210 0124599999999999999999999999999999999998763 479999999765
Q ss_pred Cc-------------------cccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000529 923 KQ-------------------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK 981 (1441)
Q Consensus 923 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 981 (1441)
.. ...++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.+||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3454 59999998865322 223444556788999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHH
Q 000529 982 -PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1060 (1441)
Q Consensus 982 -~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~ 1060 (1441)
+..+.. +..||||||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 3469999999999999999999999999999999999999999999999877999999999986 467
Q ss_pred HhhCeEEEEecCcEEEEEcCC
Q 000529 1061 EAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1061 ~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
+.+|++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999985 899999986
No 190
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=345.23 Aligned_cols=205 Identities=25% Similarity=0.370 Sum_probs=173.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC----------------------
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF---------------------- 222 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~---------------------- 222 (1441)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 89999998764210
Q ss_pred -----CccceEEEEcCCC-CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhH
Q 000529 223 -----VPERTAAYISQHD-NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEAN 296 (1441)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~ 296 (1441)
..++.++||+|++ ..+...||+|||.|+....+.. .++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHH
Confidence 1135799999985 3555689999999976543210 01122
Q ss_pred HHHHHHHHHcCCc-cccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCC
Q 000529 297 VITDYYLKVLGLD-ICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSG 375 (1441)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~ 375 (1441)
.+++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QG 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CC
Confidence 3467789999996 677877765 999999999999999999999999999999999999999999998753 35
Q ss_pred eEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHH
Q 000529 376 TAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 376 t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
.+|++++|+.+++.+++|+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 67778999999999999999999999999999998875
No 191
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2e-35 Score=335.99 Aligned_cols=214 Identities=24% Similarity=0.305 Sum_probs=177.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcCc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 920 (1441)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56778877653 246999999999999999999999999999999999976531 12799999998
Q ss_pred cCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000529 921 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGLP 991 (1441)
Q Consensus 921 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 991 (1441)
+... ...++.++|++|++.+++ .|++||+.+....+. ....++.++.++++++.+||. +..++.
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 123567999999988888 999999988754431 122344456688999999997 555554
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999976 489999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 899999875
No 192
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=336.20 Aligned_cols=214 Identities=27% Similarity=0.367 Sum_probs=179.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66778776652 3469999999999999999999999999999999999865 34799999998764
Q ss_pred cc----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 924 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
.. ..++.++|++|++.+++.+||.||+.+...++. ....++.+..++++++.+++.+..+..+ +.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 31 134569999999988888999999987643321 1223344566889999999987766654 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||++|||||+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999999877999999999985 57788999999985 8999988
Q ss_pred CC
Q 000529 1080 PL 1081 (1441)
Q Consensus 1080 ~~ 1081 (1441)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 76
No 193
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.5e-35 Score=345.68 Aligned_cols=205 Identities=26% Similarity=0.381 Sum_probs=179.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999876432 2357999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.++..+... ++....++.+++.+||++..|+.+++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchhh----
Confidence 9999998765543210 01122457789999999999988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||++|+||+++|++|+|||||+|||+.++..+.+.++++. . +++|+.++|..+++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~-~~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--K-DKTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--C-CCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999863 3 4677888999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998764
No 194
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.7e-36 Score=331.82 Aligned_cols=199 Identities=27% Similarity=0.422 Sum_probs=164.2
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCC--CCCCH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHS--PFVTV 946 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 946 (1441)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. +..||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 4799999998653 2456799999998763 33799
Q ss_pred HHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 947 YESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
+||+.+........ ....+..++.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321100 0112233456889999999987777664 36999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877899999999986 57788999999974 4 66654
No 195
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=342.73 Aligned_cols=216 Identities=26% Similarity=0.386 Sum_probs=181.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ +++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 578999988763 12469999999999999999999999999999999999865 3579999999876
Q ss_pred Cc-----cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000529 923 KQ-----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1441)
Q Consensus 923 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 996 (1441)
.. ..+++.+||++|++. .....|++||+.+..... ..+.++..++++++++.+||.+..++.+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 234567999999874 234579999998864322 2234444567899999999988877764 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 997 SgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
|||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999986 46678999999985 899
Q ss_pred EEEcCCC
Q 000529 1076 VYVGPLG 1082 (1441)
Q Consensus 1076 v~~G~~~ 1082 (1441)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 196
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=337.43 Aligned_cols=215 Identities=20% Similarity=0.259 Sum_probs=180.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 478888887753 34699999999999999999999999999999999998653 479999999865
Q ss_pred Cc----------------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000529 923 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-Q 985 (1441)
Q Consensus 923 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 985 (1441)
.. ..+++.++|++|++.+++.+|++||+.+...... .......++++.++++.+|+.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1235679999999999999999999987542111 123344556788999999997753 5
Q ss_pred ccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCe
Q 000529 986 SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1065 (1441)
Q Consensus 986 ~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~ 1065 (1441)
.. +..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 44 3469999999999999999999999999999999999999999999999877999999999986 46678999
Q ss_pred EEEEecCcEEEEEcCC
Q 000529 1066 LFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1066 vllL~~gG~~v~~G~~ 1081 (1441)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999985 899998875
No 197
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=343.02 Aligned_cols=216 Identities=23% Similarity=0.306 Sum_probs=181.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++.. +.+.+|+|||++|++||++||+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37788998876421 123599999999999999999999999999999999998663 479999999886
Q ss_pred Cc---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.+++++++++.+||.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 567789999998875432 2344455567899999999998777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ .+ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 34 67999999975 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9986
No 198
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.4e-35 Score=346.44 Aligned_cols=230 Identities=21% Similarity=0.254 Sum_probs=184.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
-++++|++.+++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478899887775321000000011235799999999999999999999999999999999998763 479999999876
Q ss_pred Ccc------ccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000529 923 KQE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1441)
Q Consensus 923 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 993 (1441)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++++.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 578899999999886543211 234555667788999999995 345555 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999765 899999999986 46778999999985
Q ss_pred cEEEEEcCCC
Q 000529 1073 GREVYVGPLG 1082 (1441)
Q Consensus 1073 G~~v~~G~~~ 1082 (1441)
|++++.|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 8999999863
No 199
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=343.48 Aligned_cols=218 Identities=22% Similarity=0.320 Sum_probs=179.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ ..|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367889988774210 0124699999999999999999999999999999999998663 479999999876
Q ss_pred Cc-------cccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000529 923 KQ-------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPG 992 (1441)
Q Consensus 923 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 992 (1441)
.. ...++.+|||+|++ .+++ .||.||+.|..... ..+.++..++++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13456799999986 3444 59999998865332 233445566788999999996 566655
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+..||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999976 4899999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 899999985
No 200
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.4e-35 Score=337.81 Aligned_cols=207 Identities=23% Similarity=0.364 Sum_probs=175.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999987 9999999998764321 35699999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||.||+.++...... ... .+....++.+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPA------------------------PLLHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCH------------------------HHHHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999886432100 000 00112356688999999888888776
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+++|+|++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNS-ALGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCcEEEEEecCHHHHHHhhCEEEEE
Confidence 999999999999999999999999999999999999999999998754 33567777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 201
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-35 Score=330.49 Aligned_cols=211 Identities=24% Similarity=0.319 Sum_probs=172.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 4577887765311 0124699999999999999999999999999999999998653 4799999998754
Q ss_pred cc---c---cc-eEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000529 924 QE---T---FA-RISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1441)
Q Consensus 924 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 996 (1441)
.. . ++ +.++|++|++.+++.+|++||+.+....+. ....+..+.+.++++.+|+.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 12 569999999988888999999988654321 222333456788999999987777664 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 997 SgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55899999985 676
Q ss_pred E
Q 000529 1076 V 1076 (1441)
Q Consensus 1076 v 1076 (1441)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 202
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.6e-35 Score=350.99 Aligned_cols=208 Identities=24% Similarity=0.305 Sum_probs=179.5
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCe----eCCCCCc-------cceEEEE
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGH----NMDEFVP-------ERTAAYI 231 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1441)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+ ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333221 2469999
Q ss_pred cCCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccc
Q 000529 232 SQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC 311 (1441)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1441)
+|++.+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433210 1112346778999999998
Q ss_pred cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh
Q 000529 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1441)
Q Consensus 312 ~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l 391 (1441)
.|+.+++ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.. ..+++++.++|+.+++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~-~~~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQA-KLNKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHh
Confidence 8888876 999999999999999999999999999999999999999999998754 3356777789999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHH
Q 000529 392 FDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 203
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-35 Score=331.74 Aligned_cols=203 Identities=30% Similarity=0.422 Sum_probs=174.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999998 999999999875421 2356999999988888999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+..+..+... .+....++++++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999998654432100 00112356789999999888888766
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||++++.+|++|+|||||+|||+.++..+.+.|+++.. + .+|+.++|+.+++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998642 3 677778899999999999999999999
Q ss_pred EEEEcCHHHH
Q 000529 403 IVYQGPRELV 412 (1441)
Q Consensus 403 iv~~G~~~~~ 412 (1441)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 204
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.7e-36 Score=332.14 Aligned_cols=195 Identities=24% Similarity=0.378 Sum_probs=166.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999875432 135799999999889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++.+..+.. . .+....++++++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------P------------------------RDANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999999875432210 0 01122456789999999888888765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.+++|++++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998743 3 566777899999999999999999
Q ss_pred cCCeE
Q 000529 399 SDGQI 403 (1441)
Q Consensus 399 ~~G~i 403 (1441)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 205
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=336.84 Aligned_cols=206 Identities=22% Similarity=0.281 Sum_probs=176.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 488999988763 24699999999999999999999999999999999998653 479999998765
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 245679999999988888999999987421 0 12345788999999988777664 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 46778999999985 899988775
No 206
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-35 Score=345.08 Aligned_cols=214 Identities=26% Similarity=0.436 Sum_probs=180.5
Q ss_pred CCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcC
Q 000529 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG 919 (1441)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 919 (1441)
.+..++.+|++|.++. ++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 3556777799988752 33799999999999999999999999999999999998774 589999999
Q ss_pred ccCC---ccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc------ccccC
Q 000529 920 YPKK---QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ------SLVGL 990 (1441)
Q Consensus 920 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~------~~vg~ 990 (1441)
.+.. ...++++++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+ +.+|+
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8764 3568899999999998886 59999998752 1222 334678888888877654 44554
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3568999999999999999999999999999999999999999999999986 599999999974 567789999998
Q ss_pred cCcEEEEEcCCC
Q 000529 1071 RGGREVYVGPLG 1082 (1441)
Q Consensus 1071 ~gG~~v~~G~~~ 1082 (1441)
+ |+++..|...
T Consensus 529 ~-G~l~~~g~~~ 539 (559)
T COG4988 529 N-GRLVEQGTHE 539 (559)
T ss_pred C-CceeccCCHH
Confidence 5 8999999863
No 207
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.3e-35 Score=329.03 Aligned_cols=197 Identities=25% Similarity=0.353 Sum_probs=170.5
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 948 (1441)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999865 35899999998764322 256899999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000529 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1441)
Q Consensus 949 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~ 1028 (1441)
|+.+....+. .. +..+.++++.+|+.+..+..+ ..||||||||++|||||+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 234678999999988777664 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1029 ~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
.++..+++.|++++++|+|||++||++. ++.+.+|++++|++ |++++.|++.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999877999999999986 57788999999985 8999999874
No 208
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.1e-35 Score=329.57 Aligned_cols=198 Identities=31% Similarity=0.459 Sum_probs=169.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCCH
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1441)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999998 999999999876421 23579999999988898999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.+.....+.. ..+....++++++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------------------------------GDELTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998865432210 001123457789999999888887766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++.. .+.+|+.++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998743 356677788999999999999999999999
Q ss_pred EEEc
Q 000529 404 VYQG 407 (1441)
Q Consensus 404 v~~G 407 (1441)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 209
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=340.92 Aligned_cols=203 Identities=26% Similarity=0.331 Sum_probs=173.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC-CCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5899999999999999999999999999999999999998 9999999998865432 357999999863 45678
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.|+....+.. ..+....++.+++.+||.+..++.+++
T Consensus 96 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~~--- 138 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPPYH--- 138 (274)
T ss_pred cHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCChhh---
Confidence 9999999865432110 011123467789999999888888876
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.++||+|++|++|
T Consensus 139 --LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 139 --LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 3 567777899999999999999999999
Q ss_pred eEEEEcCHHHH
Q 000529 402 QIVYQGPRELV 412 (1441)
Q Consensus 402 ~iv~~G~~~~~ 412 (1441)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998754
No 210
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-35 Score=329.80 Aligned_cols=192 Identities=26% Similarity=0.368 Sum_probs=162.5
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---cccceEEEEeccCCC-CCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDI-HSPFV 944 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 944 (1441)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999865 347999999987542 224567999999974 35678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCC
Q 000529 945 TVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1441)
Q Consensus 945 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTs 1024 (1441)
|++||+.+..... .......++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765432 1223334456788999999987777664 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 1025 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 1025 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
|||+.++..+++.|++++++|+|||++||++. ++...+|++++|++
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~ 209 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED 209 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC
Confidence 99999999999999999877999999999986 56677999999986
No 211
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=334.15 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=177.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 377888887652 24699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCC
Q 000529 923 KQE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-ELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 923 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 997 (1441)
... ..++.++|++|+..+++.+||.||+.+..... ..+..++.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 13457999999998898899999998764221 1122334567778877 476555554 34699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 57889999999985 89999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
.|+..
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 99863
No 212
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=340.56 Aligned_cols=206 Identities=20% Similarity=0.310 Sum_probs=173.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCC-C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHD-N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 236 (1441)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999998 999999999885421 245799999985 2
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
.+...||.||+.|+....+.. ..+....++++++.+||+ ...++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhCC
Confidence 333469999999875432110 011123467789999997 677777
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 PFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQT-DENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhCCEE
Confidence 665 999999999999999999999999999999999999999999998754 34677778899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998764
No 213
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-35 Score=351.70 Aligned_cols=209 Identities=26% Similarity=0.428 Sum_probs=178.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999998 9999999999876432 46799999999888999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.++..-... +.. . ...+...+++++++.+||.+..++.+.+
T Consensus 93 tv~e~v~~~~~~~~~--~~~---~-------------------------~~~~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFD---T-------------------------WTETDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhcc--ccc---C-------------------------CCHHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 999999986421100 000 0 0011224567899999999988888766
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|++++|+.+++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999864 3 557777899999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 214
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2e-35 Score=330.76 Aligned_cols=203 Identities=25% Similarity=0.400 Sum_probs=171.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999998 9999999998765432 3569999999989999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHc-CCccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1441)
+||+||+.++....+. . +....++.+++.+ ++++..++.+++
T Consensus 90 ~t~~~~l~~~~~~~~~--~----------------------------------~~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARRR--A----------------------------------KRKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcCc--h----------------------------------hHHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 9999999986543210 0 0011234566777 577777777765
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|++++|+.+++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999998754 35677778899999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987753
No 215
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-35 Score=334.12 Aligned_cols=206 Identities=28% Similarity=0.427 Sum_probs=174.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765332 35799999999899999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc--ccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI--CADTMVGDE 319 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1441)
||+||+.++.+..+.. ..+....++++++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWP----------------------------------KEKIRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 9999999865432210 0011223567899999985 66666655
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQ-ELGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 335667778888899999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 216
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=341.86 Aligned_cols=219 Identities=23% Similarity=0.289 Sum_probs=179.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.+.... ...+.+|+|||+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367788887663110 0124699999999999999999999999999999999998763 589999999875
Q ss_pred Cc-------cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000529 923 KQ-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1441)
Q Consensus 923 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 993 (1441)
.. ...++.+||++|++. .+..+||.||+.|..... ....++..++++++++.+||. +..++.++
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~---- 144 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSPF---- 144 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCcc----
Confidence 32 123457999999863 233579999998765432 123445556788999999997 56676644
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |
T Consensus 145 -~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 145 -ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877999999999986 57789999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 99999985
No 217
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=336.67 Aligned_cols=218 Identities=22% Similarity=0.257 Sum_probs=179.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377888887652 3469999999999999999999999999999999999865 3579999999876
Q ss_pred Ccc---c-cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000529 923 KQE---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLP----------P--EVNSETRKMFIEEVMELVELKPLRQS 986 (1441)
Q Consensus 923 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 986 (1441)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+|+.+..++
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233489999999999999999999886432110 0 00111233567888999999877776
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCe
Q 000529 987 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1065 (1441)
Q Consensus 987 ~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~ 1065 (1441)
.+ ..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 64 469999999999999999999999999999999999999999999999875 899999999986 57788999
Q ss_pred EEEEecCcEEEEEcCCC
Q 000529 1066 LFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1066 vllL~~gG~~v~~G~~~ 1082 (1441)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 8999998863
No 218
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=334.74 Aligned_cols=214 Identities=29% Similarity=0.398 Sum_probs=175.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1441)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999987 999999999876543 135799999999889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++..... . . .... .+. ...+....++.+++.+||.+..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~-~---~~~~------~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-S-T---WRSL------FGL---------------FPKEEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-h-h---hhhh------ccc---------------CcHHHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999988643110 0 0 0000 000 0001123456789999998877777765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. ..+.+|++++|+.+++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINR-EEGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 33566777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 219
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.6e-35 Score=333.33 Aligned_cols=218 Identities=22% Similarity=0.249 Sum_probs=175.3
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5677776652 346999999999999999999999999999999999974111357999999987643
Q ss_pred c---cc-ceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCc
Q 000529 925 E---TF-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP----EVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNG 995 (1441)
Q Consensus 925 ~---~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~ 995 (1441)
. .. +..++|++|++.+++.+|++|++.+........ ....++..+.++++++.++|. +..++.++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 12 234899999999999999999998764322110 112233345688999999997 45555432 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHh-hCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~-~D~vllL~~gG~ 1074 (1441)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877899999999986 46566 799999984 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 9999875
No 220
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=328.29 Aligned_cols=198 Identities=28% Similarity=0.415 Sum_probs=169.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999987 9999999988754 2346799999999888899999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||+.+.....+.. . .+....++++++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLK----------K------------------------EEARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCC----------h------------------------HHHHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 9999865433210 0 01122456789999999888887765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIV 404 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv 404 (1441)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+.+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998753 3 567777899999999999999999999998
Q ss_pred EEc
Q 000529 405 YQG 407 (1441)
Q Consensus 405 ~~G 407 (1441)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 221
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=339.82 Aligned_cols=213 Identities=23% Similarity=0.314 Sum_probs=178.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++ +++.+|+||||+|++||++||+|||||||||||++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 46778776652 12359999999999999999999999999999999999865 35799999998764
Q ss_pred c----cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 924 Q----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 924 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
. ...++.+||++|++. .+...|+.||+.+..... ..+..+.++.++++++.+||.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 223567999999975 356689999998865432 1234444567889999999988877764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|++++++|+|||++||+++ ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 35 66999999985 899999
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 986
No 222
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=302.57 Aligned_cols=200 Identities=28% Similarity=0.404 Sum_probs=176.9
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHH
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 948 (1441)
..+|+|||++|.+||.++++||||||||||||+++|..++ ..|+|.+||.++....- .-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 4599999999999999999999999999999999998774 57999999998764322 2389999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCH
Q 000529 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1441)
Q Consensus 949 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~ 1028 (1441)
|+.|+..++ .+.+.++.+.+.+.+..+||.+..++.+ .+|||||||||.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 4567888899999999999999887764 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecC-cEEEEEcCC
Q 000529 1029 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GREVYVGPL 1081 (1441)
Q Consensus 1029 ~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~g-G~~v~~G~~ 1081 (1441)
-+++.++++|-++.+ +|+.++++||+.. +..-+++++++|+.+ ||++..=++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 999999999999865 5999999999976 444568999999843 688877665
No 223
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=335.05 Aligned_cols=214 Identities=24% Similarity=0.286 Sum_probs=176.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578889887652 246999999999999999999999999999999999976421 2589999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ..+++.++|++|++.+++ .|++||+.+....+ ..+.+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988887 89999998875432 1233344456788999999842 33443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|+++++ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999864 899999999986 4678899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 224
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.7e-35 Score=330.88 Aligned_cols=205 Identities=20% Similarity=0.343 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-----ccceEEEEcCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNHIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999988 999999999876421 1357999999988888
Q ss_pred CCCHHHHHHHHhHh-cCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 240 EMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
.+||+||+.++... .+.. ..+....++++++.+||++..+..+++
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------------------------------KEEAEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChHHHhcChhh
Confidence 99999999886421 1100 001122456789999998877877765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. . ++++++++|+.+++.+++|++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998743 3 566777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 225
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.1e-35 Score=334.48 Aligned_cols=214 Identities=24% Similarity=0.306 Sum_probs=179.1
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35778877653 24699999999999999999999999999999999998653 4799999998753
Q ss_pred c----------------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000529 924 Q----------------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSL 987 (1441)
Q Consensus 924 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 987 (1441)
. ...++.++|++|++.+++..|+.||+.+..... .........+.++++++.+|+.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123344455688999999998877765
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeE
Q 000529 988 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1066 (1441)
Q Consensus 988 vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~v 1066 (1441)
+ ..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||++. ++...+|++
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3 469999999999999999999999999999999999999999999999765 899999999986 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000529 1067 FLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1067 llL~~gG~~v~~G~~ 1081 (1441)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 226
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.6e-35 Score=332.49 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=170.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCcceEEEECCeeCCCCC-----ccceEEEEcCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQH 234 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999999 777 999999999875432 13579999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccc
Q 000529 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1441)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1441)
+.++ .+||+||+.++.+..+... ..+....++++++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL---------------------------------KEELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc---------------------------------HHHHHHHHHHHHHHcCCChHHhc
Confidence 8777 8999999998754322100 00012345678999999877666
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+. .+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|++++|+.+++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 530 134999999999999999999999999999999999999999999998753 3 6777788999999999999
Q ss_pred EEEecCCeEEEEcCHHH
Q 000529 395 IILLSDGQIVYQGPREL 411 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~ 411 (1441)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 227
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=332.72 Aligned_cols=214 Identities=25% Similarity=0.325 Sum_probs=178.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEec
Confidence 367788887653 2469999999999999999999999999999999999865 3579999999865
Q ss_pred C------c---cccceEEEEeccCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000529 923 K------Q---ETFARISGYCEQNDIHSPFVTVYESLFYS-AWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1441)
Q Consensus 923 ~------~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~-~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 992 (1441)
. . ...++.++|++|++.+++.+|+.||+.+. .... .....+..+.+.++++.+|+.+..++.+
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 139 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP---- 139 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh----
Confidence 2 0 12345789999999999999999999653 2221 1223334456888999999988777764
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+
T Consensus 140 -~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 140 -LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999877999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 899999875
No 228
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=333.42 Aligned_cols=216 Identities=23% Similarity=0.278 Sum_probs=177.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcCc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 920 (1441)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887652 246999999999999999999999999999999999976421 35899999998
Q ss_pred cCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCC
Q 000529 921 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGLPGV 993 (1441)
Q Consensus 921 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~~ 993 (1441)
++.. ...++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.++|.+ ..++. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7642 23456799999999888899999999886543211 1122344556889999999864 23433 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ .+.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 56999999999999999999999999999999999999999999999864 899999999986 46788999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99998875
No 229
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.4e-35 Score=345.22 Aligned_cols=209 Identities=22% Similarity=0.250 Sum_probs=177.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCC--
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD-- 235 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 235 (1441)
..++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999987 9999999999865432 35799999997
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADT 314 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1441)
.+++.+||.||+.+..+....+ +. .++....++++++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~------------------------~~~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LS------------------------RQEVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CC------------------------HHHHHHHHHHHHHHcCCChHHhcC
Confidence 5788999999999875432100 00 011223466789999994 46677
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+ ..+.+++.++|+...+.+++|+
T Consensus 158 ~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 YPHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQR-EMGLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCE
Confidence 7665 999999999999999999999999999999999999999999998754 3467788899999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
|++|.+|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 230
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=344.46 Aligned_cols=217 Identities=21% Similarity=0.381 Sum_probs=177.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC-------------------Ccc
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------------------VPE 225 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1441)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999998 99999999887542 113
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHH
Q 000529 226 RTAAYISQHDN-HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLK 304 (1441)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1441)
+.++||+|++. .+...||+||+.|+....+.. .++...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 67999999862 334569999999875322110 0111234667899
Q ss_pred HcCCc-cccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEec
Q 000529 305 VLGLD-ICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQ 383 (1441)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q 383 (1441)
.+||+ ...++.+.+ |||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|++++|
T Consensus 162 ~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITH 234 (320)
T ss_pred HcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEec
Confidence 99996 456666554 999999999999999999999999999999999999999999998753 3567777899
Q ss_pred ChhhHHhhcCeEEEecCCeEEEEcCHHHHH---HHHHhcCCCCCC
Q 000529 384 PAPETYNLFDDIILLSDGQIVYQGPRELVL---EFFESMGFKCPK 425 (1441)
Q Consensus 384 ~~~~~~~l~D~vilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 425 (1441)
+.+++.+++|+|++|++|++++.|+++++. +.++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 999999999999999999999999998874 234455665554
No 231
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=334.18 Aligned_cols=217 Identities=24% Similarity=0.272 Sum_probs=178.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367888887753 246999999999999999999999999999999999986532 2479999999
Q ss_pred ccCC--c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKK--Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~--~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.++. . ..+++.++|++|++.+++.+||.||+.+....+.. ....+...+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8764 1 13456799999999999999999999886543211 1123334456788999999853 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 356999999999999999999999999999999999999999999999965 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 5 899999885
No 232
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-35 Score=352.04 Aligned_cols=200 Identities=29% Similarity=0.441 Sum_probs=166.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1441)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+..+ +++++||+|++.++ .-|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-ccc
Confidence 7899999999999999999999999999999999999998 9999999999887764 58999999998655 579
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC------cccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL------DICADTMV 316 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 316 (1441)
+||||.++..... . +.+.++++.-|| +...||.+
T Consensus 411 ireNi~l~~~~~s------------~----------------------------e~i~~al~~a~l~~~v~~p~GLdt~i 450 (559)
T COG4988 411 IRENILLARPDAS------------D----------------------------EEIIAALDQAGLLEFVPKPDGLDTVI 450 (559)
T ss_pred HHHHhhccCCcCC------------H----------------------------HHHHHHHHHhcHHHhhcCCCcccchh
Confidence 9999999643110 0 011222333222 45778999
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
|+ .++||||||+|||++|||++++++++++||||++||.+|...|.+.|.++++ + +++++++|... ...-+|+|+
T Consensus 451 ge-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~-ktvl~itHrl~-~~~~~D~I~ 525 (559)
T COG4988 451 GE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--Q-KTVLVITHRLE-DAADADRIV 525 (559)
T ss_pred cc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--C-CeEEEEEcChH-HHhcCCEEE
Confidence 95 6788999999999999999999999999999999999999999999998753 3 55555666544 456799999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 000529 397 LLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1441)
+|++|+++++|.++++.+
T Consensus 526 vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 526 VLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EecCCceeccCCHHHHhh
Confidence 999999999999998853
No 233
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=335.01 Aligned_cols=214 Identities=27% Similarity=0.367 Sum_probs=178.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788877653 3469999999999999999999999999999999999865 34799999998753
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+++.+..++.++ .|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDYP-----QLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHH
Confidence 2 223457999999988878899999998754321 11222334567889999999887777654 699999
Q ss_pred HHHHHHHHHHh------hCCCeeEEeCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 1001 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 1001 rqRv~iA~aL~------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
||||+||+||+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||++. .+.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 56899999999986 57778999999985 8
Q ss_pred EEEEEcCCC
Q 000529 1074 REVYVGPLG 1082 (1441)
Q Consensus 1074 ~~v~~G~~~ 1082 (1441)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 999988763
No 234
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.7e-35 Score=332.06 Aligned_cols=215 Identities=26% Similarity=0.319 Sum_probs=177.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++++|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56777776542 34699999999999999999999999999999999998653 4799999998754
Q ss_pred ccc----cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 924 QET----FARISGYCEQNDIHSPFVTVYESLFYSAWLRLP--P---EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
... .++.++|++|++.+++.+||+||+.+....... . ....+..+++++++++.+|+.+..+..++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----- 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAG----- 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChh-----
Confidence 311 234699999999999999999999886432100 0 01123345568899999999887776644
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999976 799999999986 57778999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9998875
No 235
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=326.22 Aligned_cols=194 Identities=26% Similarity=0.342 Sum_probs=164.1
Q ss_pred ceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc-ccceEEEEeccCCCCCCCCCHHHHHHH
Q 000529 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLFY 952 (1441)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 952 (1441)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999865 3479999999876431 234679999999999899999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHH
Q 000529 953 SAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1441)
Q Consensus 953 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1032 (1441)
....+. .. .+..++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1233456889999999988777764 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1033 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1033 ~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
.+++.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999999754 899999999986 46788999999985 7887654
No 236
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.1e-35 Score=332.24 Aligned_cols=205 Identities=24% Similarity=0.348 Sum_probs=173.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-----------ccceEEEEcC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-----------PERTAAYISQ 233 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----------~~~~~~yv~Q 233 (1441)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35899999999999999999999999999999999999987 999999999875321 1357999999
Q ss_pred CCCCCCCCCHHHHHHHHhHh-cCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccc
Q 000529 234 HDNHIGEMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICA 312 (1441)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1441)
++.+++.+||+||+.++... .+. . ..+....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGE--P--------------------------------KEEATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCC--C--------------------------------HHHHHHHHHHHHHHcCCcchh
Confidence 98888899999999885421 110 0 001123456788999998887
Q ss_pred ccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhc
Q 000529 313 DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLF 392 (1441)
Q Consensus 313 dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~ 392 (1441)
|+.+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|++++|+.+++.+++
T Consensus 139 ~~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~ 211 (250)
T PRK11264 139 TSYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVA 211 (250)
T ss_pred hCChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhc
Confidence 877765 999999999999999999999999999999999999999999998753 3 556777899999999999
Q ss_pred CeEEEecCCeEEEEcCHHHHH
Q 000529 393 DDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1441)
|++++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988764
No 237
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=338.01 Aligned_cols=214 Identities=25% Similarity=0.369 Sum_probs=179.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|++++++ +++.+|+||||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 66788887663 12359999999999999999999999999999999999865 35899999998764
Q ss_pred c---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 924 Q---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
. ...++.+||++|++. .+...||.||+.+..... ....+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 334579999998765422 2334445567889999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999986 57789999999985 899999
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 986
No 238
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=333.66 Aligned_cols=215 Identities=21% Similarity=0.231 Sum_probs=176.2
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|||++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 478899987763 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 990 (1441)
.++.. ...++.++|++|++.+++ .||+||+.+...... .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 124567999999988775 899999988654321 112333456678889998874 334443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ .+.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 35699999999999999999999999999999999999999999999996 4799999999986 4678899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 239
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=300.74 Aligned_cols=205 Identities=25% Similarity=0.386 Sum_probs=180.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
..+|+|+|+.|.+||.++++||||||||||||+++|+.+|+ .|+|.+||++++.- ...-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999998 99999999988753 34568999999999999999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||++|+.++.|+++ .+...++.+.+...||++..+..|-. |
T Consensus 93 dNvafgL~l~Gi~k----------------------------------~~R~~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEK----------------------------------AQRREIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHhCcccccccceEe-----e
Confidence 99999999988632 12334567889999999988887765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~--~G~ 402 (1441)
||||||||.|||||..+|+.|+||||+++||.-++.++.+.|-++.+. .+.-++.++|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~-tgk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQE-TGKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHH-hCCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999999887764 45667779999999999999999998 589
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
|+..=|++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998777664443
No 240
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.5e-35 Score=334.60 Aligned_cols=213 Identities=27% Similarity=0.368 Sum_probs=174.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1441)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999987 999999999876432 135699999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++...... .. ... .+. ...+....++++++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~---~~~------~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TW---RSL------LGR---------------FSEEDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhccccccc--ch---hhh------hcc---------------ccHHHHHHHHHHHHHcCcHhhhcCCccc
Confidence 999999999875321100 00 000 000 0001123456789999998877877665
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++.+++|++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINK-EDGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 999999999999999999999999999999999999999999998754 33567777889999999999999999
Q ss_pred cCCeEEEEcCHHHH
Q 000529 399 SDGQIVYQGPRELV 412 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1441)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998765
No 241
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=338.67 Aligned_cols=215 Identities=26% Similarity=0.304 Sum_probs=180.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
-+.++|+++.+.. ..+.+|+|||++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 3778888877631 124599999999999999999999999999999999998763 489999999876
Q ss_pred Ccc---ccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQE---TFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~~---~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
... ..++.+||++|++. .++..||.||+.+..... ....++.+++++++++.+||.+..++.++ .|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPH-----RLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCH
Confidence 432 23567999999973 566789999998865432 12344445678999999999988877654 6999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ +.+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 899999999986 34 46999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9986
No 242
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6.6e-35 Score=329.46 Aligned_cols=206 Identities=26% Similarity=0.368 Sum_probs=173.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc--cceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP--ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999998 9999999998754322 257999999988888999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.....+.. ..+....++++++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------------------------------RAEARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998765432110 000112356788999999888888776
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+.++++++|+.+++.. +|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~-~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIEA-DDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHhh-CCEEEEEeCCe
Confidence 9999999999999999999999999999999999999999999987643 34567778888888864 99999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+++.|+++++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887753
No 243
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=337.14 Aligned_cols=213 Identities=23% Similarity=0.362 Sum_probs=176.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 46778877652 24599999999999999999999999999999999997653 4799999998763
Q ss_pred c-----cccceEEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 Q-----ETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
. ...++.++|++|++.. ....|+.||+.+..... ....++..+.++++++.+++.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234679999998753 34568999998764332 1233344456788999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 46788999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9875
No 244
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=350.08 Aligned_cols=203 Identities=25% Similarity=0.297 Sum_probs=175.0
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc---c----cceEEEEeccCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T----FARISGYCEQNDI 939 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 939 (1441)
+...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+||++|+..
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 344689999999999999999999999999999999998763 479999999876431 1 1346999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000529 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1441)
Q Consensus 940 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlL 1019 (1441)
+++.+||+||+.|....+. ...++.+++++++++.+||.+..++.+ ..|||||||||+|||||+.+|++|||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 233445567889999999998877764 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1020 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999975 4899999999986 57788999999985 899999875
No 245
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=340.90 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=177.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCC--C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1441)
+.+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999987 9999999999865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
+.+.+||.+++....+.... .. ..+....+.++++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LS------------------------AAERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CC------------------------HHHHHHHHHHHHHHCCCChHHhcCC
Confidence 78899999999876543210 00 011223567889999996 466777
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.. ..+++++.++|+...+.+++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQ-ELGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 765 999999999999999999999999999999999999999999998754 34677888999999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1441)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 246
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=332.58 Aligned_cols=217 Identities=20% Similarity=0.260 Sum_probs=178.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887763 246999999999999999999999999999999999976432 2589999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.++.. ...++.++|++|+..+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999988754331 1123344556788999999842 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 356999999999999999999999999999999999999999999999964 689999999986 5778899999997
Q ss_pred -----cCcEEEEEcCC
Q 000529 1071 -----RGGREVYVGPL 1081 (1441)
Q Consensus 1071 -----~gG~~v~~G~~ 1081 (1441)
+.|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 25899999875
No 247
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.6e-35 Score=327.24 Aligned_cols=203 Identities=33% Similarity=0.497 Sum_probs=166.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1441)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3579999999999999999999999999999999999998 76 99999999987543345679999999989999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHH-HHHHcCCccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDY-YLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 319 (1441)
+||+||+.|+......... . + ......++. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~---~-~---------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS---S-D---------------------------AIRKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhccccc---c-h---------------------------HHHHHHHHHHHHHhhcchhhhcccccC-
Confidence 9999999987653321000 0 0 000112233 78888998777777665
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecCh-hhHHhhcCeEEEe
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPA-PETYNLFDDIILL 398 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~-~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ .+ .+++.++|+. .++.+++|++++|
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998753 34 4555566665 6899999999999
Q ss_pred cCCeEEEEc
Q 000529 399 SDGQIVYQG 407 (1441)
Q Consensus 399 ~~G~iv~~G 407 (1441)
++|+++++|
T Consensus 218 ~~G~i~~~g 226 (226)
T cd03234 218 SSGEIVYSG 226 (226)
T ss_pred eCCEEEecC
Confidence 999999876
No 248
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-35 Score=334.03 Aligned_cols=217 Identities=25% Similarity=0.331 Sum_probs=179.1
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|||+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788877652 3569999999999999999999999999999999999765 34799999998753
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
. ...++.++|++|+..+++.+|+.|++.++...... .....+...+.++++++.+++.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345699999998888889999999875311000 01111233456788999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999999877999999999986 57889999999985 7999998
Q ss_pred CCC
Q 000529 1080 PLG 1082 (1441)
Q Consensus 1080 ~~~ 1082 (1441)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 864
No 249
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.6e-35 Score=325.20 Aligned_cols=195 Identities=27% Similarity=0.380 Sum_probs=168.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC-CccceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-VPERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 243 (1441)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999987 99999999887542 123579999999888889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999886532210 012346678999999888887766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. .+.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 345677788999999999999999999999
Q ss_pred EEEc
Q 000529 404 VYQG 407 (1441)
Q Consensus 404 v~~G 407 (1441)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-35 Score=320.41 Aligned_cols=196 Identities=31% Similarity=0.588 Sum_probs=163.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCcc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 921 (1441)
.+.|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999998653 13457999999999999999999999999999999999986522 468999999987
Q ss_pred CCc--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 922 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999997753211 2222 3469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766643467889999999985 888876
Q ss_pred c
Q 000529 1079 G 1079 (1441)
Q Consensus 1079 G 1079 (1441)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 251
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=334.86 Aligned_cols=220 Identities=26% Similarity=0.349 Sum_probs=180.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCcc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 921 (1441)
-+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 367888887652 346999999999999999999999999999999999986532 236999999987
Q ss_pred CCc--------cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 000529 922 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-----EVNSETRKMFIEEVMELVELKPLRQSLV 988 (1441)
Q Consensus 922 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-----~~~~~~~~~~v~~~l~~l~L~~~~~~~v 988 (1441)
... ...++.++|++|++.+++.+|++||+.+......+. ....++.+++++++++.+|+.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999899999999998753211000 0112334457889999999987777764
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEE
Q 000529 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1067 (1441)
Q Consensus 989 g~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vl 1067 (1441)
+ .||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|+++
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 4 69999999999999999999999999999999999999999999999764 899999999986 4778899999
Q ss_pred EEecCcEEEEEcCCC
Q 000529 1068 LMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1068 lL~~gG~~v~~G~~~ 1082 (1441)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 8999998864
No 252
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.2e-34 Score=340.85 Aligned_cols=213 Identities=21% Similarity=0.250 Sum_probs=175.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCC--
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD-- 235 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1441)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742238999999999865432 14799999997
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1441)
.+.+.+||.+++.+....... . ...+....+.++++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~------------------------~~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------M------------------------SKAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------C------------------------CHHHHHHHHHHHHHHcCCCChHHH-
Confidence 678999999999876543210 0 001122346678999999754322
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
. +...+.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+ ..+++++.++|+.+.+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKR-EFNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEECCHHHHHHhCCEE
Confidence 1 133456999999999999999999999999999999999999999999998765 34677888999999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999999885
No 253
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.68 Aligned_cols=201 Identities=25% Similarity=0.369 Sum_probs=170.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999998 99999999987542 34689999998888889999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||+.++....+.. . .+....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998865432110 0 01122457789999998888877765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~--~G~ 402 (1441)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999987543 35667778899999999999999998 599
Q ss_pred EEEEcCHH
Q 000529 403 IVYQGPRE 410 (1441)
Q Consensus 403 iv~~G~~~ 410 (1441)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99987653
No 254
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.1e-35 Score=325.18 Aligned_cols=196 Identities=23% Similarity=0.364 Sum_probs=164.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999998 9999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++.+||+||+.+........ . .+....+.++++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------V------------------------KEAKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChh
Confidence 88999999999865322110 0 0011235678999999888887776
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
. |||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.. ..+.+|+.++|+.+++. .+|+|++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNR-ELNTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHh-hcCEEEE
Confidence 5 999999999999999999999999999999999999999999998754 33456666788888775 4799999
Q ss_pred ecCCeEE
Q 000529 398 LSDGQIV 404 (1441)
Q Consensus 398 L~~G~iv 404 (1441)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 255
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=5.6e-35 Score=346.31 Aligned_cols=204 Identities=22% Similarity=0.315 Sum_probs=176.2
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCc----cCCc---cc---c-ceEEEEec
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY----PKKQ---ET---F-ARISGYCE 935 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 935 (1441)
+...+|+|+||+|++||+++|+|+||||||||+++|+|...+ ..|+|.++|. +... .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 456799999999999999999999999999999999998763 4799999996 2211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCC
Q 000529 936 QNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPS 1015 (1441)
Q Consensus 936 Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~ 1015 (1441)
|+..++|.+||+||+.|+...+ ..+.+++++.++++++.+||.+..+..++ .||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999886543 23445566778999999999988887654 599999999999999999999
Q ss_pred eeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1016 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1016 iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
||+|||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999765 899999999986 57789999999985 8999999864
No 256
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=340.86 Aligned_cols=210 Identities=20% Similarity=0.230 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCeeCCCCCc-------cceEEEEcCCC-
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL-KVSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1441)
.++|+|||++|++||+++|+||||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987521 138999999999865432 13699999997
Q ss_pred -CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc---c
Q 000529 236 -NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI---C 311 (1441)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~ 311 (1441)
.+.|.+||.+++......... . ...+....++++|+.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~------------------------~~~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------G------------------------NKKTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------C------------------------CHHHHHHHHHHHHHHCCCCChHHH
Confidence 478899999998776543210 0 01112345677899999974 3
Q ss_pred cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh
Q 000529 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1441)
Q Consensus 312 ~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l 391 (1441)
.+..+++ |||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.. ..+.+++.++|+..++.++
T Consensus 147 l~~~p~~-----LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~-~~g~til~iTHdl~~~~~~ 220 (326)
T PRK11022 147 LDVYPHQ-----LSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQ-KENMALVLITHDLALVAEA 220 (326)
T ss_pred HhCCchh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHh
Confidence 4555544 999999999999999999999999999999999999999999998754 3456788899999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHH
Q 000529 392 FDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|+|++|.+|++++.|+.+++.
T Consensus 221 adri~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999998875
No 257
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.9e-35 Score=333.42 Aligned_cols=223 Identities=23% Similarity=0.295 Sum_probs=178.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++.....+ ..+++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67788887764210000 0123579999999999999999999999999999999999865 35799999998764
Q ss_pred cc------ccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000529 924 QE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 994 (1441)
.. ..++.++|++|++ .+.+.+||+|++.+...... .......++.++++++.+|+. +..+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 31 1345799999996 46678999999976543211 122334455688999999996 5666654 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 69999999999999999999999999999999999999999999999865 899999999986 46678999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999886
No 258
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=334.97 Aligned_cols=218 Identities=28% Similarity=0.370 Sum_probs=179.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478888887652 3469999999999999999999999999999999999865 3479999999875
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----SLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCH
Confidence 32 23456799999998888889999999875321110 001112334567899999999877777654 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57788999999985 89999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 98763
No 259
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.3e-35 Score=328.44 Aligned_cols=210 Identities=27% Similarity=0.325 Sum_probs=173.1
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4677776552 3469999999999999999999999999999999999865 347999999987543
Q ss_pred c----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCHH
Q 000529 925 E----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVE-LKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 925 ~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgG 999 (1441)
. ..++.++|++|++.+++.+|+.|++.+....+. .. ..+..+++++.++ +.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCHH
Confidence 1 124569999999999999999999988654321 11 1233567777776 555556553 469999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999874 899999999986 56678999999985 899999
Q ss_pred cCCC
Q 000529 1079 GPLG 1082 (1441)
Q Consensus 1079 G~~~ 1082 (1441)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 9864
No 260
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=334.98 Aligned_cols=218 Identities=22% Similarity=0.297 Sum_probs=180.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 578889988763 34699999999999999999999999999999999998653 479999999875
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.++|++|++.+++..|++|++.+......+ .....+..++.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 42 22345699999999888889999999765211100 00011233456789999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999864 899999999986 57889999999985 89999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99864
No 261
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=336.53 Aligned_cols=218 Identities=24% Similarity=0.334 Sum_probs=176.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++++++... ...+++|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEc
Confidence 367888887763210 0113599999999999999999999999999999999998653 579999999875
Q ss_pred Cc-------cccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCC
Q 000529 923 KQ-------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPG 992 (1441)
Q Consensus 923 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~ 992 (1441)
.. ...++.++|++|++ .+++ .||+||+.+..... ....++.++.++++++.++|.+ ..++.+
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 143 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP---- 143 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 32 12456799999986 3444 69999998765332 1233444556788999999973 455553
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 144 -FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999877899999999986 56778999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 899998875
No 262
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.7e-35 Score=324.31 Aligned_cols=192 Identities=28% Similarity=0.355 Sum_probs=163.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCC-CCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDN-HIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999998 9999999998754333467999999864 3557899
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.++....+. ....++++++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 9999875432100 012356789999999888888766
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. . +.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 56677788999999999999999999997
Q ss_pred E
Q 000529 404 V 404 (1441)
Q Consensus 404 v 404 (1441)
|
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 263
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-35 Score=317.65 Aligned_cols=190 Identities=59% Similarity=0.946 Sum_probs=161.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46788888876421 012469999999999999999999999999999999999643224589999999876
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
. ...++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 334567999999998889999999998643110 39999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998644678899999998548998875
No 264
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.47 Aligned_cols=214 Identities=28% Similarity=0.356 Sum_probs=178.0
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.+. +++.+|+|||++|++||+++|+||||||||||+++|+|...+ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 56788887653 123599999999999999999999999999999999997653 4799999998763
Q ss_pred c-----cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 Q-----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..++.++ .||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPPH-----HLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCChh-----hCC
Confidence 1 123567999999963 333479999998764321 12334445668899999999888887654 699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57778999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9886
No 265
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-34 Score=325.32 Aligned_cols=213 Identities=25% Similarity=0.358 Sum_probs=175.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 47888988776321 0113599999999999999999999999999999999998653 479999999876
Q ss_pred Cccc------c-ceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000529 923 KQET------F-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1441)
Q Consensus 923 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 995 (1441)
.... . ++.++|++|++.+++.+|+.||+.+....+. ......+++++++++.+++.+..++.+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 2469999999988888999999987654321 223344567889999999988777664 36
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999764 899999999986 34 56999999985 77
Q ss_pred EEE
Q 000529 1075 EVY 1077 (1441)
Q Consensus 1075 ~v~ 1077 (1441)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 266
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-35 Score=335.98 Aligned_cols=216 Identities=27% Similarity=0.389 Sum_probs=178.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCC-CCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD-NHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1441)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999998 9999999999865432 35799999986 36778
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
.||.||+.++.+..+.. .++....++++++.+||++..++.+++
T Consensus 97 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999999875432110 011123467889999999888888876
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 33566777888888886 5999999999
Q ss_pred CeEEEEcCHHHHHH---HHHhcCCCCC
Q 000529 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1441)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~~p 424 (1441)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3334454443
No 267
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.87 Aligned_cols=217 Identities=20% Similarity=0.257 Sum_probs=177.6
Q ss_pred CceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEE
Q 000529 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRI 917 (1441)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i 917 (1441)
...+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34688999988763 2369999999999999999999999999999999999753 1 135799999
Q ss_pred cCccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 000529 918 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLV 988 (1441)
Q Consensus 918 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 988 (1441)
+|.+... ...++.++|++|+..+++ .|++||+.+...... ..+.+..+++++++++.+++.+ ..+..
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 153 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS- 153 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC-
Confidence 9987632 134567999999988777 899999987654321 1233444566889999999843 23333
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEE
Q 000529 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1068 (1441)
Q Consensus 989 g~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vll 1068 (1441)
...||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|++++
T Consensus 154 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~ 227 (260)
T PRK10744 154 ----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAF 227 (260)
T ss_pred ----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEE
Confidence 34699999999999999999999999999999999999999999999996 4789999999986 46778999999
Q ss_pred EecCcEEEEEcCC
Q 000529 1069 MKRGGREVYVGPL 1081 (1441)
Q Consensus 1069 L~~gG~~v~~G~~ 1081 (1441)
|++ |+++..|+.
T Consensus 228 l~~-G~i~~~g~~ 239 (260)
T PRK10744 228 MYL-GELIEFGNT 239 (260)
T ss_pred EEC-CEEEEeCCH
Confidence 985 899999875
No 268
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-35 Score=342.65 Aligned_cols=229 Identities=24% Similarity=0.339 Sum_probs=184.5
Q ss_pred cCCCCCcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeeceEEEEeCCeEEEEEcCCCC
Q 000529 110 VGIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSS 189 (1441)
Q Consensus 110 ~g~~~p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~Gs 189 (1441)
..+..|.=.|+|+|++.+-. ++++||+++||+|++||-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 45667777899999887741 234699999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHh
Q 000529 190 GKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTEL 266 (1441)
Q Consensus 190 GKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1441)
||||+|++|.++++ . +|+|.+||.++.+... |+.+|||||+..+| +-||.+||.++..- ..++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 5 8999999999987654 57899999976554 56999999997532 123444455
Q ss_pred hHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhhhhHHHHHHHHhcCCccce
Q 000529 267 SRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALF 346 (1441)
Q Consensus 267 ~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vll 346 (1441)
|++-.. +.+ ...|++.++|.||+. ++-|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~---------------------------hd~--i~~l~~GY~T~VGer-G~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGL---------------------------HDV--ISRLPDGYQTLVGER-GLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCc---------------------------HHH--HHhccccchhhHhhc-ccccccchHHHHHHHHHHhcCCCeEE
Confidence 543211 111 235788999999973 34499999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcCHHHHHH
Q 000529 347 MDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 347 LDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~~~~~~~ 414 (1441)
+|||||.||+.|..++++.+.+. ..++| +|.+.|+.+ +..-||+|++|++|++...|+.++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rT-vI~IvH~l~-ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRT-VIMIVHRLD-LLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCe-EEEEEecch-hHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 23445 445556544 567799999999999999999999875
No 269
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=330.24 Aligned_cols=219 Identities=22% Similarity=0.294 Sum_probs=175.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 919 (1441)
.+.++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 588999988763 2469999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87642 123567999999988887 5999999887543311 12233455678899999985421111111 135
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 6999999999999999999999999999999999999999999999954 799999999986 57788999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9998875
No 270
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-34 Score=340.19 Aligned_cols=225 Identities=20% Similarity=0.291 Sum_probs=182.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-eEEEEEEEcCcc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 921 (1441)
-++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47889988776421 12356999999999999999999999999999999999976532 237999999988
Q ss_pred CCc---cc---cc-eEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000529 922 KKQ---ET---FA-RISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1441)
Q Consensus 922 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 992 (1441)
+.. .. ++ +.++||+|++ .+.|.+|+.+++........ ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 643 11 22 4799999998 67889999999877654432 234455556788999999997533221 1 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+.+|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 4579999999999999999999999999999999999999999999999765 899999999986 4667899999997
Q ss_pred CcEEEEEcCCC
Q 000529 1072 GGREVYVGPLG 1082 (1441)
Q Consensus 1072 gG~~v~~G~~~ 1082 (1441)
+|++++.|+..
T Consensus 237 ~G~ive~g~~~ 247 (330)
T PRK09473 237 AGRTMEYGNAR 247 (330)
T ss_pred CCEEEEECCHH
Confidence 58999999863
No 271
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=339.24 Aligned_cols=221 Identities=19% Similarity=0.241 Sum_probs=180.0
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC-c-eEEEEEEEcCcc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGDIRISGYP 921 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 921 (1441)
++++|+++.+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776421 1125699999999999999999999999999999999997642 2 357999999987
Q ss_pred CCcc---c----cceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccccc
Q 000529 922 KKQE---T----FARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL---RQSLVG 989 (1441)
Q Consensus 922 ~~~~---~----~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~vg 989 (1441)
+... . .++.++|++|++ .+.|.+|+.+++........ ....++.++++.++++.+||.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 6431 1 123699999998 46788999998866543321 12345556778999999999753 3333
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEE
Q 000529 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFL 1068 (1441)
Q Consensus 990 ~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vll 1068 (1441)
+.+|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|||++|||++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 357999999999999999999999999999999999999999999999976 4899999999986 46788999999
Q ss_pred EecCcEEEEEcCCC
Q 000529 1069 MKRGGREVYVGPLG 1082 (1441)
Q Consensus 1069 L~~gG~~v~~G~~~ 1082 (1441)
|. +|+++..|+..
T Consensus 227 m~-~G~ive~g~~~ 239 (326)
T PRK11022 227 MY-AGQVVETGKAH 239 (326)
T ss_pred EE-CCEEEEECCHH
Confidence 98 48999999863
No 272
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.5e-34 Score=325.10 Aligned_cols=201 Identities=26% Similarity=0.355 Sum_probs=166.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCC--CC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHD--NH 237 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1441)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999988 999999999886543 135799999997 46
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMV 316 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1441)
++.+||+||+.+.....+.... + +......+.+++.+||. ...++.+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~----------~----------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK----------K----------------------EARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH----------H----------------------HHHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999886543211000 0 00011124678889995 5667776
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. ..+.+|+.++|+.+++.+++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEE
Confidence 65 999999999999999999999999999999999999999999998754 325667778889999999999999
Q ss_pred EecCCeEEEEc
Q 000529 397 LLSDGQIVYQG 407 (1441)
Q Consensus 397 lL~~G~iv~~G 407 (1441)
+|++|+++.+|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 273
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.79 Aligned_cols=203 Identities=25% Similarity=0.400 Sum_probs=169.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999998 9999999998765432 3569999999888999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHc-CCccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1441)
+||+||+.++..... . . +....++.+++.+ +|.+..++.+++
T Consensus 95 ~tv~~~l~~~~~~~~---~---------~------------------------~~~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R---------D------------------------QFQERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h---------h------------------------HHHHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999988642110 0 0 0011234456666 466666666554
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 999999999999999999999999999999999999999999998753 3 4566668899999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 274
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=325.66 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=179.2
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++++. .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4677777652 34699999999999999999999999999999999998763 47999999987643
Q ss_pred c-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 925 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
. ..++.++|++|++..++.+|+.||+.+....+. .......+.++++++.+|+.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 124579999999998888999999987654331 223344556788999999988777764 4699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999865 899999999986 47788999999985 899988864
No 275
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=337.44 Aligned_cols=207 Identities=26% Similarity=0.358 Sum_probs=174.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCC--CC---ccceEEEEcCCCC-CC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE--FV---PERTAAYISQHDN-HI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1441)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .. .++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999998 9999999998742 11 2357999999863 34
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
...||+||+.++....+.. . .+....++++++.+||.+..++.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhCCccc
Confidence 5689999999865432210 0 01123467789999999888888766
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+.+++.++||++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQK-ELGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998765 33566777899999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 000529 399 SDGQIVYQGPRELVLE 414 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1441)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 276
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.6e-35 Score=332.48 Aligned_cols=217 Identities=28% Similarity=0.390 Sum_probs=178.1
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 46677776652 34699999999999999999999999999999999998653 4799999998754
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
. ...++.++|++|++..++.+||.||+.+....... ......+..+.+.++++.+++.+..++.++ .||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMS-----TLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHH
Confidence 3 12345689999998777889999999875311100 001112334567889999999887777643 69999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||++||+||+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57789999999985 7999998
Q ss_pred CCC
Q 000529 1080 PLG 1082 (1441)
Q Consensus 1080 ~~~ 1082 (1441)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 863
No 277
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6.4e-35 Score=327.86 Aligned_cols=198 Identities=24% Similarity=0.375 Sum_probs=167.1
Q ss_pred eeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHH
Q 000529 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLF 951 (1441)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 951 (1441)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999865 35799999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHH
Q 000529 952 YSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1031 (1441)
Q Consensus 952 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~ 1031 (1441)
+......+ ....++.++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 76321111 2233444556789999999988777764 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1032 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1032 ~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57788999999985 899988764
No 278
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=364.22 Aligned_cols=222 Identities=21% Similarity=0.307 Sum_probs=185.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++++. ++.+|+||||+|++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378888887652 3469999999999999999999999999999999999865433589999999876
Q ss_pred Cccc----cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQET----FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.... .++.+||++|++.+++.+||+||+.+....+.......+..++.++++++.+++.+..++.++ .|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVG-----NLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchh-----hCCH
Confidence 4321 235699999999888999999999886543211111233445568899999999887777654 6999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||||+||+||+.+|+||||||||+|||+.++..+++.|++++++|.|||++||+++ .+.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999986 57778999999985 899999
Q ss_pred cCCCCc
Q 000529 1079 GPLGHH 1084 (1441)
Q Consensus 1079 G~~~~~ 1084 (1441)
|+..+.
T Consensus 225 ~~~~~~ 230 (506)
T PRK13549 225 RPAAGM 230 (506)
T ss_pred cccccC
Confidence 987643
No 279
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.35 Aligned_cols=215 Identities=22% Similarity=0.297 Sum_probs=174.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCC---CCceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 919 (1441)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887652 246999999999999999999999999999999999952 2212479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 143 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKES--- 143 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhCC---
Confidence 87642 123567999999988776 6999999886543311 1223344567889999998642 3333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14245 144 --AFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY 219 (250)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 35699999999999999999999999999999999999999999999995 4799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 220 ~-G~~~~~~~~ 229 (250)
T PRK14245 220 M-GEMVEYDDT 229 (250)
T ss_pred C-CEEEEECCH
Confidence 5 899999976
No 280
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=324.48 Aligned_cols=197 Identities=29% Similarity=0.440 Sum_probs=168.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1441)
.++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999998 999999998875432 2467999999998899999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+.....+.. + .+....++.+++.+||++..++.+++
T Consensus 89 v~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 130 (211)
T cd03264 89 VREFLDYIAWLKGIP----------S------------------------KEVKARVDEVLELVNLGDRAKKKIGS---- 130 (211)
T ss_pred HHHHHHHHHHHhCCC----------H------------------------HHHHHHHHHHHHHCCCHHHHhCchhh----
Confidence 999999865432210 0 00122456789999999888888766
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. + +++++++|+.+++.+++|++++|++|+
T Consensus 131 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 131 -LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998743 3 677778899999999999999999999
Q ss_pred EEEEc
Q 000529 403 IVYQG 407 (1441)
Q Consensus 403 iv~~G 407 (1441)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 281
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=322.66 Aligned_cols=203 Identities=26% Similarity=0.307 Sum_probs=183.0
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---c---c-cceEEEEeccCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---E---T-FARISGYCEQNDIHS 941 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~---~-~~~~~gyv~Q~~~~~ 941 (1441)
..-++|+|++|+.||++.|||-||||||||+++|.+... +..|+|.++|.++.. . . .++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 457899999999999999999999999999999999876 458999999987642 1 2 245799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000529 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDE 1021 (1441)
|+.||.||..|+..++ ..+++++++++.++|+.+||....++++ ++||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 4677889999999999999999999884 5699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1022 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
|+|.|||--+.++++-|.++.++ ++|||++|||.+ +.+.+-|||.+|+ +|+++..|++.+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 99999999999999999998655 899999999997 6889999999997 699999999853
No 282
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=330.29 Aligned_cols=194 Identities=22% Similarity=0.296 Sum_probs=168.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHHH
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRE 245 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~~--~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAEA--REDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHHh--hCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999998 99999999876432 467999999988888899999
Q ss_pred HHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCC
Q 000529 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1441)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 325 (1441)
|+.++... . ....++.+++.+||++..+..+++ ||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 99874210 0 011245678999998887877765 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000529 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1441)
Q Consensus 326 GGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~ 405 (1441)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+.+|++++|+.+++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999987543 35667778899999999999999999999999
Q ss_pred EcCHH
Q 000529 406 QGPRE 410 (1441)
Q Consensus 406 ~G~~~ 410 (1441)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 283
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=339.03 Aligned_cols=226 Identities=25% Similarity=0.275 Sum_probs=183.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
-++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478899987774321000 001235799999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------ccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000529 923 KQE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGV 993 (1441)
Q Consensus 923 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 993 (1441)
... .+++.++||+|++ .+.|.+|+.+++........ .....+.++++.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 57888999999876544321 2344455677899999999964 45555 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..|||||||||+|||||+.+|++|++||||+|||..++..|+++|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999764 999999999986 46678999999985
Q ss_pred cEEEEEcCCC
Q 000529 1073 GREVYVGPLG 1082 (1441)
Q Consensus 1073 G~~v~~G~~~ 1082 (1441)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 8999999863
No 284
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=318.90 Aligned_cols=180 Identities=43% Similarity=0.748 Sum_probs=155.6
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcceEEEECCeeCCCCC--ccceEEEEcCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNH 237 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1441)
.++.+|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 44579999999999999999999999999999999999998 66 999999999876532 24679999999999
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++.+||+||+.++.+.. .++.+
T Consensus 95 ~~~~tv~~~l~~~~~~~---------------------------------------------------------~~~~~- 116 (202)
T cd03233 95 FPTLTVRETLDFALRCK---------------------------------------------------------GNEFV- 116 (202)
T ss_pred CCCCcHHHHHhhhhhhc---------------------------------------------------------cccch-
Confidence 99999999998753210 12333
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.++++....+.++++++||+.+++.+++|++++
T Consensus 117 ----~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 117 ----RGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 3499999999999999999999999999999999999999999999876533556777778888999999999999
Q ss_pred ecCCeEEEEc
Q 000529 398 LSDGQIVYQG 407 (1441)
Q Consensus 398 L~~G~iv~~G 407 (1441)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 285
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.58 Aligned_cols=224 Identities=21% Similarity=0.249 Sum_probs=180.1
Q ss_pred cCCCceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEE
Q 000529 838 PFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGD 914 (1441)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~ 914 (1441)
|-.+..+.++|++++++ ++.+|+|||+++++||++||+|||||||||||++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33344689999988763 24699999999999999999999999999999999997642 135899
Q ss_pred EEEcCccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc
Q 000529 915 IRISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVG 989 (1441)
Q Consensus 915 i~i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg 989 (1441)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567999999988877 69999998864322 112233445668889999998642211122
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 990 ~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
. .+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 1 245799999999999999999999999999999999999999999999996 4799999999986 577899999999
Q ss_pred ecCcEEEEEcCC
Q 000529 1070 KRGGREVYVGPL 1081 (1441)
Q Consensus 1070 ~~gG~~v~~G~~ 1081 (1441)
++ |++++.|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 84 899999986
No 286
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=332.98 Aligned_cols=205 Identities=26% Similarity=0.359 Sum_probs=171.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC---ccceEEEEcCCCC-CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999997 999999999886432 2457999999863 6778
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++....+.. .++....++++++.+||++..++.+++
T Consensus 99 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCccc--
Confidence 99999999865422110 001123467789999999888888765
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.. .++++|++++|+.+++. .+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 34456666777777774 7999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 287
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.9e-35 Score=325.06 Aligned_cols=195 Identities=26% Similarity=0.389 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999987 999999999876532 135799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++....+.. .++....++++++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------------------------------PREIRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999999875432210 001122456789999999888887765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . ++++++++|+.+++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998743 3 566777889999999999999999
Q ss_pred cCCeE
Q 000529 399 SDGQI 403 (1441)
Q Consensus 399 ~~G~i 403 (1441)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 288
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.29 Aligned_cols=215 Identities=23% Similarity=0.312 Sum_probs=179.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++. +++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4788998876531 134699999999999999999999999999999999998653 479999999886
Q ss_pred Cc---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ..+++.++|++|++. .++.+|++||+.+..... ....++.+..++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998864322 1233444556889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 5999999999863 4 57999999985 89999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 289
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.3e-34 Score=326.58 Aligned_cols=201 Identities=30% Similarity=0.419 Sum_probs=169.2
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc--cccceEEEEec-cCCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCE-QNDIHSPF 943 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 943 (1441)
+.+++|+|+|++|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 456799999999999999999999999999999999998653 47999999986432 23456789997 55667788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000529 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1441)
Q Consensus 944 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPT 1023 (1441)
+|++|++.+....+. ...++..+.++++++.+++.+..++.++ .||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999988654431 2233445567889999999888777654 59999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1024 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1024 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999999764 899999999986 57788999999985 7888764
No 290
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=333.39 Aligned_cols=204 Identities=26% Similarity=0.379 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCC-CCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDN-HIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 239 (1441)
.++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999987 9999999998865322 357999999864 467
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
..||+||+.|+....+.. ..+....++++++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999999865432110 001123456789999999888888766
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|++++|+.+++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998753 356677788888888 5699999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999998764
No 291
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.7e-34 Score=325.73 Aligned_cols=202 Identities=25% Similarity=0.319 Sum_probs=169.5
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--ccceEEEEc-CCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYIS-QHDNHIG 239 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~-Q~d~~~~ 239 (1441)
..+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|++..... .++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3467999999999999999999999999999999999999998 999999998754321 235799998 5566778
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
.+||+||+.+.....+.. .++....++.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLP----------------------------------PARFKKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhcCChhh-
Confidence 999999999865432210 001112356788999999988988876
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++.+|+.++|+.+++.+++|++++|.
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNR-ERGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999998754 335667778898999999999999999
Q ss_pred CCeEEEEc
Q 000529 400 DGQIVYQG 407 (1441)
Q Consensus 400 ~G~iv~~G 407 (1441)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 292
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=331.07 Aligned_cols=216 Identities=24% Similarity=0.263 Sum_probs=176.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 990 (1441)
.++.. ..+++.++|++|++.+++. ||.||+.+....+.. ........+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87642 1245679999999888774 999999887543311 11223334567889999999642 2333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999965 789999999986 4668899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 293
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.7e-34 Score=326.79 Aligned_cols=206 Identities=23% Similarity=0.359 Sum_probs=171.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999863 22389999999987642 1135799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1441)
+ +||+||+.+..+..+... ..+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------------------------------KKELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 999999998754322100 001122456789999997 66666
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 6655 999999999999999999999999999999999999999999998743 3 5777788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 294
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=336.78 Aligned_cols=205 Identities=25% Similarity=0.362 Sum_probs=172.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCCC-
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDN- 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 46999999999999999999999999999999999999998 999999999875321 1357999999862
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
.+..+||+||+.|+....+.. .++....++++++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999999865432110 011123467789999997 577887
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 776 999999999999999999999999999999999999999999998743 3677778999999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 295
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2e-34 Score=328.84 Aligned_cols=206 Identities=23% Similarity=0.320 Sum_probs=174.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC----------------ccceE
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----------------PERTA 228 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 228 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999999998 999999999875321 14579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHhHh-cCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcC
Q 000529 229 AYISQHDNHIGEMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG 307 (1441)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1441)
+|++|++.+++.+||.||+.++... .+.. ..+....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 9999999889999999999885321 1100 0011123567899999
Q ss_pred CccccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhh
Q 000529 308 LDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPE 387 (1441)
Q Consensus 308 L~~~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~ 387 (1441)
|++..+..+.+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..++++++++|+.++
T Consensus 136 l~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLAS-EHDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHH
Confidence 98887777655 999999999999999999999999999999999999999999998754 335677778899999
Q ss_pred HHhhcCeEEEecCCeEEEEcCHHHHH
Q 000529 388 TYNLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 388 ~~~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 296
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2e-34 Score=325.55 Aligned_cols=212 Identities=27% Similarity=0.400 Sum_probs=178.9
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|++++++ ++.+|+|+|+++.+||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4667776652 34699999999999999999999999999999999998653 47999999987643
Q ss_pred c-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 925 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234579999999998888999999987654331 222333456789999999987777764 3699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 99999999999999999999999999999999999998775 899999999986 5778899999998 4899999885
No 297
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.5e-34 Score=321.25 Aligned_cols=198 Identities=23% Similarity=0.291 Sum_probs=167.2
Q ss_pred eeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc-cccceEEEEeccCCCCCCCCCHHHH
Q 000529 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-ETFARISGYCEQNDIHSPFVTVYES 949 (1441)
Q Consensus 871 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 949 (1441)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 45799999999999999999999999999999998663 47999999987643 2345679999999999988999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000529 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1441)
Q Consensus 950 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~ 1029 (1441)
+.+...... . .....++.++++++.+|+.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 977542211 1 11223456788999999988777764 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1030 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1030 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|+ +|+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999999764 899999999986 4677899999997 489988875
No 298
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.8e-33 Score=372.07 Aligned_cols=135 Identities=20% Similarity=0.221 Sum_probs=108.7
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHh---hCCC
Q 000529 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELV---ANPS 1015 (1441)
Q Consensus 940 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRv~iA~aL~---~~p~ 1015 (1441)
.+...||.|+|.++..-........++..+.+ ++++.+||.+. .++.+ ..||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44568999999887542211112233444455 58899999875 56653 469999999999999998 6999
Q ss_pred eeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe-----cCcEEEEEcCCC
Q 000529 1016 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPLG 1082 (1441)
Q Consensus 1016 iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~-----~gG~~v~~G~~~ 1082 (1441)
+|+|||||+|||+.+...+++.|++++++|.|||+++|++. .+ +.+|++++|. .+|+++..|++.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8999999995 368999999874
No 299
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=328.24 Aligned_cols=206 Identities=21% Similarity=0.357 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999988 9999999998765432 3569999999988889
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.+..+.... .. .++....++.+++.+||++..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LS------------------------AEQREDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccc---------cC------------------------HHHHHHHHHHHHHHcCCHHHhhcchhh--
Confidence 9999999876432110 00 001123456789999998877777665
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++++.+|++|+|||||+|||+.++..+.+.++++.. .+.+|+.++|+.+++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999988643 355677788888999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 300
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-35 Score=343.30 Aligned_cols=211 Identities=27% Similarity=0.438 Sum_probs=177.5
Q ss_pred CceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCc
Q 000529 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY 920 (1441)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 920 (1441)
+..++|+||++++. +++++|++|||+|++||.+||+|+|||||||++++|.+... .+|+|.+||+
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34699999999875 34569999999999999999999999999999999998664 3799999999
Q ss_pred cCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccC
Q 000529 921 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGL 990 (1441)
Q Consensus 921 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~ 990 (1441)
++++ +.+|+.+||||||..++. -||.+|+.|+. .+.+.+ +|-++.+..++.+. .++.||+
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8754 567889999999988774 69999998863 233333 35556666666543 3455776
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
.|. .|||||||||+||||++.+|+|+++|||||.||.++..++++.+++. ..|+|+|++.|+.+ ....||+|++|+
T Consensus 484 rG~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RGL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVLD 559 (591)
T ss_pred ccc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEEE
Confidence 554 49999999999999999999999999999999999999999999994 46899999999964 678999999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++...|+.
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 6 799999986
No 301
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=322.94 Aligned_cols=212 Identities=25% Similarity=0.344 Sum_probs=179.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCcceEEEECCeeCCCCCc-------cceEEEEcCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-SLKVSGRVTYNGHNMDEFVP-------ERTAAYISQH 234 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1441)
..++++|||+++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++..+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 5679999999999999999999999999999999999998 4 33467999999998765543 2479999999
Q ss_pred C--CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccc-
Q 000529 235 D--NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC- 311 (1441)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 311 (1441)
+ .+-|.+||.+.+.-..+...... ..++...++.++|+.+||++.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 67899999999887665421100 112234456788999999863
Q ss_pred --cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHH
Q 000529 312 --ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1441)
Q Consensus 312 --~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1441)
.+... ..|||||||||.||.||+.+|++|+.|||||+||...+.+|++.|+++.+ ..+++++.|+|+..-+.
T Consensus 145 ~~~~~YP-----helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva 218 (316)
T COG0444 145 RRLKSYP-----HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVA 218 (316)
T ss_pred HHHhhCC-----cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH
Confidence 34444 45999999999999999999999999999999999999999999999876 56888999999999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHH
Q 000529 390 NLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 390 ~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
++||||+||..|+||+.|+.+++.
T Consensus 219 ~~aDri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 219 EIADRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred HhcceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999999875
No 302
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=326.36 Aligned_cols=220 Identities=22% Similarity=0.271 Sum_probs=177.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--Cc-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 477888887653 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.++.. ...++.++|++|+..+++.+|+.||+.+...... .....+.++.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87632 2346679999999999999999999987643321 112233345678899999986421111111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|. +|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCE
Confidence 6999999999999999999999999999999999999999999999975 689999999986 5778899999997 489
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999886
No 303
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=327.58 Aligned_cols=215 Identities=21% Similarity=0.262 Sum_probs=175.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC-ceEEEEEEEcCccC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGDIRISGYPK 922 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 922 (1441)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778877653 24699999999999999999999999999999999997532 24579999999876
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCCCc
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGLPGVNG 995 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~~~ 995 (1441)
.. ...++.++|++|++.+++ .|++||+.+....+... ......+++++++++.+++.+. .+.. ...
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 43 234567999999988887 69999998865443110 1123334567889999999532 3332 356
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999986 47788999999985 899
Q ss_pred EEEcCC
Q 000529 1076 VYVGPL 1081 (1441)
Q Consensus 1076 v~~G~~ 1081 (1441)
++.|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 999875
No 304
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.71 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=174.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC-CCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1441)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999998 9999999998764322 356999999863 34568
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.++....+.. .++....++.+++.+||.+..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998865432110 011123467789999999888888765
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+.+|+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPE-TYGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 33567777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 305
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=331.56 Aligned_cols=216 Identities=24% Similarity=0.291 Sum_probs=179.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4788999877631 123589999999999999999999999999999999998653 479999999876
Q ss_pred Cc---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+..+ ..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999974 677789999998864322 1233444556889999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 455 4999999985 89999
Q ss_pred EcCCC
Q 000529 1078 VGPLG 1082 (1441)
Q Consensus 1078 ~G~~~ 1082 (1441)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99863
No 306
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.83 Aligned_cols=219 Identities=26% Similarity=0.350 Sum_probs=177.2
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc------eEEEEEEE
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGDIRI 917 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i 917 (1441)
++++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778876652 346999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000529 918 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1441)
Q Consensus 918 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 993 (1441)
+|.+... ...++.++|++|++..++.+|++||+.+....... .....++.++.++++++.+++.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987642 23345689999998766679999999875321110 01111233456788999999987776654
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhh
Q 000529 994 NGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1063 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~---------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~ 1063 (1441)
..|||||||||+|||+|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 469999999999999999 599999999999999999999999999999876 899999999986 577789
Q ss_pred CeEEEEecCcEEEEEcCCC
Q 000529 1064 DELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1064 D~vllL~~gG~~v~~G~~~ 1082 (1441)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 8999999864
No 307
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=344.89 Aligned_cols=195 Identities=24% Similarity=0.384 Sum_probs=171.9
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC-------CccceEEEEcCCCCCCCCCC
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1441)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999987531 12467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.|+.+.. ....++++++.+||++..++.+++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 999999863200 012356789999999888888766
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++++.++|+.+++.+++|++++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~-~~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAR-EINIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999998764 335677778999999999999999999999
Q ss_pred EEEEcCHHHHH
Q 000529 403 IVYQGPRELVL 413 (1441)
Q Consensus 403 iv~~G~~~~~~ 413 (1441)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999885
No 308
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.2e-34 Score=322.64 Aligned_cols=194 Identities=29% Similarity=0.416 Sum_probs=165.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC------ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1441)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999987 999999999886542 135799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.++....+.. ..+....++++++.+||++..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------------------------------EREIQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCChhh
Confidence 8999999999875432210 001122456789999998877877765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.+++|++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999998643 3 566777889999999999999999
Q ss_pred cCCe
Q 000529 399 SDGQ 402 (1441)
Q Consensus 399 ~~G~ 402 (1441)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 309
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.4e-35 Score=291.32 Aligned_cols=198 Identities=27% Similarity=0.384 Sum_probs=170.8
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc------c-cceEEEEeccCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------T-FARISGYCEQNDI 939 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~~~ 939 (1441)
+...||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++..+. . ..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 567899999999999999999999999999999999998764 479999999986431 1 3467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEE
Q 000529 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1441)
Q Consensus 940 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlL 1019 (1441)
+.|++|..||+.....++.... ........+.|+.+||.+-.+.+. .+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~---~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESS---ADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcc---ccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 9999999999998888775322 223344678899999998777664 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 1020 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
||||-+||.++...|.+++-.+.+ .|.|.|++||||. +..-|||.+-|.. |+++.
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 999999999999999999999865 4999999999985 6778999999975 78764
No 310
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=334.03 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=180.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCce-EEEEEEEcCcc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGDIRISGYP 921 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 921 (1441)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788898877631 12359999999999999999999999999999999999765321 13899999988
Q ss_pred CCcc---ccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 922 KKQE---TFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 922 ~~~~---~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.... ..++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 6432 23567999999974 566789999998764322 2344455567889999999988777764 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 8999999999863 4 57999999985 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99986
No 311
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.56 Aligned_cols=209 Identities=26% Similarity=0.342 Sum_probs=174.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 467888887652 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.++|++|++.+++ .|++||+.+....+ . .....++++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999988776 69999987653321 1 1124577899999996 455554 346999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999986 57778999999985 89998
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 312
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.5e-34 Score=321.94 Aligned_cols=198 Identities=28% Similarity=0.354 Sum_probs=166.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35899999999999999999999999999999999999998 9999999998865432 2469999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++.+||.||+.+.....+.. ..+....++.+++.+||.+..++.++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGES----------------------------------SRQSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhCChh
Confidence 89999999998865332110 00112345778999999988888776
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++. ..+++|+.++|+.+++ +.+|++++
T Consensus 146 ~-----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 Q-----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNR-EHGTTLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHH-HhCCEEEE
Confidence 6 999999999999999999999999999999999999999999998754 3345666678888777 55999999
Q ss_pred ecCCeEEEE
Q 000529 398 LSDGQIVYQ 406 (1441)
Q Consensus 398 L~~G~iv~~ 406 (1441)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 313
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=335.22 Aligned_cols=219 Identities=20% Similarity=0.304 Sum_probs=176.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++++++... .....+|+|||+++++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 478899988764210 0013599999999999999999999999999999999998653 479999999875
Q ss_pred Cc--------cccceEEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000529 923 KQ--------ETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPG 992 (1441)
Q Consensus 923 ~~--------~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 992 (1441)
.. ...++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 31 2245679999999742 22369999998864322 123344445678899999994 5666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999999764 899999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 314
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=333.73 Aligned_cols=219 Identities=21% Similarity=0.290 Sum_probs=179.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
-+.++|++++++... ....+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 377889888764210 0012469999999999999999999999999999999999865 3479999999876
Q ss_pred Cc----cccceEEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 923 KQ----ETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 923 ~~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ...++.+||++|++.. +...||.|++.|..... .....+.+++++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2245679999999742 33468999998875432 2234445567899999999998888765 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 344 4999999985 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99986
No 315
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=338.31 Aligned_cols=222 Identities=18% Similarity=0.211 Sum_probs=178.1
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--ceEEEEEEEcCcc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGDIRISGYP 921 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~ 921 (1441)
+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|.... ....|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888776431 1235799999999999999999999999999999999997642 2357999999987
Q ss_pred CCcc---c----cceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCccc---ccc
Q 000529 922 KKQE---T----FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPE---VNSETRKMFIEEVMELVELKPL---RQS 986 (1441)
Q Consensus 922 ~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~~ 986 (1441)
+... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 6421 1 1246999999975 5688999999976432111000 1112345678899999999753 234
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCe
Q 000529 987 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1065 (1441)
Q Consensus 987 ~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~ 1065 (1441)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 3579999999999999999999999999999999999999999999999874 999999999986 47788999
Q ss_pred EEEEecCcEEEEEcCC
Q 000529 1066 LFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1066 vllL~~gG~~v~~G~~ 1081 (1441)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999984 899999986
No 316
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-34 Score=343.29 Aligned_cols=199 Identities=25% Similarity=0.426 Sum_probs=172.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1441)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 999999999875321 2467999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.|+.+... . .+....++++++.+||++..|+.+++
T Consensus 92 v~enl~~~~~~~~------------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------P------------------------SERRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC------------h------------------------hHHHHHHHHHHHHcCChhHhcCChhh----
Confidence 9999998753210 0 00122457789999999888888776
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++++.++|+.+++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~-~~g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHA-EFGIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999998764 335667778899999999999999999999
Q ss_pred EEEEcCHHHHH
Q 000529 403 IVYQGPRELVL 413 (1441)
Q Consensus 403 iv~~G~~~~~~ 413 (1441)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998875
No 317
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.7e-34 Score=319.45 Aligned_cols=189 Identities=23% Similarity=0.364 Sum_probs=161.6
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC---c----cccceEEEEeccCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK---Q----ETFARISGYCEQNDIHS 941 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 941 (1441)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999865 34799999998742 1 12356799999999988
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000529 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDE 1021 (1441)
+..|++||+.+..... ........+.++++++.+|+.+..++.+ ..||||||||++||+||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999998865432 1223344566889999999988777764 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999985 34689999875
No 318
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.78 Aligned_cols=214 Identities=22% Similarity=0.258 Sum_probs=174.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..+. .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999987763 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .||+||+.+.+..+. .. ...++.++++++.+++.. ..+..
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 151 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES--- 151 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC---
Confidence 87531 234567999999998887 499999988764331 11 123345677888888742 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.||++++|+
T Consensus 152 --~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 152 --GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 356999999999999999999999999999999999999999999999964 799999999986 5788999999998
Q ss_pred c----------CcEEEEEcCC
Q 000529 1071 R----------GGREVYVGPL 1081 (1441)
Q Consensus 1071 ~----------gG~~v~~G~~ 1081 (1441)
+ .|++++.|+.
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 5 3678999886
No 319
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-34 Score=324.68 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=170.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999998 9999999998765432 3569999999989999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcC-Cccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG-LDICADTMVGDE 319 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1441)
+||+||+.++....+.. . ....+.+++.++ +++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~- 131 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD- 131 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh-
Confidence 99999999865432100 0 011344566665 56666776665
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+ ..+++++.++|+.+++.+++|+|++|+
T Consensus 132 ----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 132 ----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRA-EGGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-cCCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 335677778899999999999999999
Q ss_pred CCeEEEEcCHHHH
Q 000529 400 DGQIVYQGPRELV 412 (1441)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1441)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 320
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=327.23 Aligned_cols=205 Identities=25% Similarity=0.340 Sum_probs=171.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC----------------CccceE
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF----------------VPERTA 228 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 228 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 35999999999999999999999999999999999999987 99999999887421 113579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHhH-hcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcC
Q 000529 229 AYISQHDNHIGEMTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG 307 (1441)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1441)
+|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999988999999999987542 11100 0011234567899999
Q ss_pred Ccccc-ccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChh
Q 000529 308 LDICA-DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAP 386 (1441)
Q Consensus 308 L~~~~-dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~ 386 (1441)
|.+.. +..+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+.+|++++|+.+
T Consensus 141 l~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHH
Confidence 98753 655544 999999999999999999999999999999999999999999998753 3566777889999
Q ss_pred hHHhhcCeEEEecCCeEEEEcCHHHHH
Q 000529 387 ETYNLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 387 ~~~~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 321
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=320.51 Aligned_cols=225 Identities=23% Similarity=0.326 Sum_probs=181.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC-C-c-eEEEEEEEcCc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YITGDIRISGY 920 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~-~-~~~G~i~i~g~ 920 (1441)
++++|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|... + + ...|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4667777666532 124579999999999999999999999999999999999765 2 3 45689999998
Q ss_pred cCCc---c---c-cceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000529 921 PKKQ---E---T-FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLP 991 (1441)
Q Consensus 921 ~~~~---~---~-~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 991 (1441)
++-. + . ..+.+++++|++. +.|.+||.+.+.=....+.... ..++.++++.++|+.+||.+.....-.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~-- 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS-- 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--
Confidence 6532 1 1 2357999999975 5688999887755444332111 345566778899999999875332222
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
.+.+|||||||||.||.||+.+|++||.||||++||...+++|+++|+++.+ .|.|+|++|||+.. +.++||+|.||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE
Confidence 2467999999999999999999999999999999999999999999999986 59999999999974 889999999998
Q ss_pred cCcEEEEEcCCC
Q 000529 1071 RGGREVYVGPLG 1082 (1441)
Q Consensus 1071 ~gG~~v~~G~~~ 1082 (1441)
.|++|+.|+..
T Consensus 229 -aG~iVE~g~~~ 239 (316)
T COG0444 229 -AGRIVEEGPVE 239 (316)
T ss_pred -CcEEEEeCCHH
Confidence 58999999973
No 322
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-34 Score=323.33 Aligned_cols=199 Identities=27% Similarity=0.389 Sum_probs=171.2
Q ss_pred eeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc-ccceEEEEeccCCCCCCCCCHHHH
Q 000529 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE-TFARISGYCEQNDIHSPFVTVYES 949 (1441)
Q Consensus 871 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 949 (1441)
+|+|+|++|+|||+++|+||||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999865 3579999999876432 234579999999999989999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHH
Q 000529 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1441)
Q Consensus 950 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~ 1029 (1441)
+.+..... ........+.+.++++.++|.+..++.+ ..||||||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777764 459999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1030 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1030 ~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
++..+.+.|++++++ |+|||++||++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999986 47778999999985 899998875
No 323
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=325.58 Aligned_cols=203 Identities=26% Similarity=0.342 Sum_probs=171.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCC------C---CccceEEEEcCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE------F---VPERTAAYISQHDN 236 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1441)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999987 9999999997631 1 11357999999998
Q ss_pred CCCCCCHHHHHHHH-hHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccc
Q 000529 237 HIGEMTVRETLAFA-ARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1441)
+++.+||+||+.+. ....+.. ..+....++.+++.+||++..++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------------------------------KDQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 2221110 001122457789999998888887
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+|||+++.+|++++|||||+|||..++..+.+.|+++.. .++++++++|+.+++.+++|++
T Consensus 139 ~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 PLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred hhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCEE
Confidence 765 999999999999999999999999999999999999999999998743 3566777889999999999999
Q ss_pred EEecCCeEEEEcCHHHH
Q 000529 396 ILLSDGQIVYQGPRELV 412 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1441)
++|.+|+++++|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 324
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=324.32 Aligned_cols=211 Identities=22% Similarity=0.296 Sum_probs=175.4
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++. + ..|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888877631 1 138999999999999999999999999999999865 34799999998764
Q ss_pred cc-ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 924 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+|+.+..++.+. .|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLPG-----QLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHHHH
Confidence 32 12456999999999999999999997753211 111 12335568899999999888787754 69999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 899999875
No 325
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.6e-34 Score=324.68 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=168.8
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHHHHH
Q 000529 168 LKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETL 247 (1441)
Q Consensus 168 L~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1441)
|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765432 348999999889999999999
Q ss_pred HHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChh
Q 000529 248 AFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGG 327 (1441)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGG 327 (1441)
.++......+ .. ..+....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LS------------------------KSERRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CC------------------------HHHHHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8863210000 00 001123456789999999888888766 9999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEc
Q 000529 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQG 407 (1441)
Q Consensus 328 qrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G 407 (1441)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ..+.+|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWE-EHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999999999999999999999999999999999999998754 33566777889999999999999999999999988
Q ss_pred CHHH
Q 000529 408 PREL 411 (1441)
Q Consensus 408 ~~~~ 411 (1441)
+..+
T Consensus 198 ~~~~ 201 (230)
T TIGR01184 198 QILE 201 (230)
T ss_pred Ccee
Confidence 6544
No 326
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=332.94 Aligned_cols=205 Identities=27% Similarity=0.358 Sum_probs=173.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC----ccceEEEEcCCCC-CCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----PERTAAYISQHDN-HIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1441)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999998 999999999886422 2467999999863 344
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1441)
..||.||+.|+....+.. ..+....++++++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------------------------------PEEIRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCccc-
Confidence 579999999875432210 001123467889999999888888876
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNK-KYGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecChHHHhc-CCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 335666777888888865 99999999
Q ss_pred CCeEEEEcCHHHHH
Q 000529 400 DGQIVYQGPRELVL 413 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1441)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 327
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.1e-34 Score=323.89 Aligned_cols=204 Identities=23% Similarity=0.298 Sum_probs=170.1
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcceEEEECCeeCCCCCc-cceEEEEcCCCC--CCC
Q 000529 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP----SLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HIG 239 (1441)
Q Consensus 167 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1441)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 9999999998765432 257999999974 556
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc---ccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD---ICADTMV 316 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~---~~~dt~v 316 (1441)
.+|+.||+.+.....+.. . .+....++++++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999998764322110 0 01123467789999998 3456666
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ |||||||||+||++++.+|++|+|||||+|||..+...+.+.|+++.. ..+++|+.++|+.+++..++|+++
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 55 999999999999999999999999999999999999999999998754 335677778899999999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 000529 397 LLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1441)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 328
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.8e-34 Score=368.66 Aligned_cols=207 Identities=25% Similarity=0.386 Sum_probs=165.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|++++||+.++|+||||||||||+++|+|++ |+ +|+|.+||+++.+... ++.++||+|++.+| +.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HG 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-Cc
Confidence 36899999999999999999999999999999999999 87 9999999999987654 46899999988666 56
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+|||.++..- .+.++..++.... ..+..++ .|++..||.||+. +
T Consensus 438 TI~eNI~~g~~~-------------------------~~~eei~~al~~a------~l~~~i~--~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNPD-------------------------ASDEQLQQALENA------WVSEFLP--LLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCCC-------------------------CCHHHHHHHHHHh------CHHHHHH--hcccccccccccC-C
Confidence 999999986310 0001111111100 0111222 4667789999974 5
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+ +.++|.. +..+.||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~Tv-IiItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTT-LMVTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEE-EEEecCh-HHHHhCCEEEEEeCC
Confidence 6699999999999999999999999999999999999999999998753 34454 4455655 456779999999999
Q ss_pred eEEEEcCHHHHHH
Q 000529 402 QIVYQGPRELVLE 414 (1441)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1441)
+++++|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 329
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3e-34 Score=325.51 Aligned_cols=212 Identities=24% Similarity=0.341 Sum_probs=175.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999998 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++...... .+...... ..++....++++++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~~--~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDKS--VFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhcccc--cccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCChhh--
Confidence 9999999986432100 00000000 0001123467789999999888887776
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. +.+|+.++|+.+++.++||+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998743 35677788999999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987753
No 330
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=330.99 Aligned_cols=205 Identities=28% Similarity=0.392 Sum_probs=172.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC--C---ccceEEEEcCCCC-CC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDN-HI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 238 (1441)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... . .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35899999999999999999999999999999999999988 99999999987421 1 1357999999863 34
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
..+||+||+.++....+. .+ .+....+..+++.+||++..++.+++
T Consensus 92 ~~~tv~e~i~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~~ 137 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGL----------SK------------------------EEVEKRVKEALKAVGMEGFENKPPHH 137 (275)
T ss_pred ccccHHHHHHHHHHHcCC----------CH------------------------HHHHHHHHHHHHHCCCchhhcCChhh
Confidence 567999999876432110 00 01122456789999999888888876
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||++++|
T Consensus 138 -----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 138 -----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 567777899999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998875
No 331
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=325.89 Aligned_cols=206 Identities=21% Similarity=0.291 Sum_probs=167.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999998631 1389999999987421 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC----cccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL----DICADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~~~dt 314 (1441)
.+||+||+.++....+... ..+....++.+++.+|+ .+..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKD---------------------------------KKKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4999999998754321100 00112235566777777 344566
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++. . +++|+.++|+.+++.+++|+
T Consensus 147 ~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 NALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--E-SYTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhCCE
Confidence 6554 99999999999999999999999999999999999999999999873 2 36677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++.+|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 332
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.9e-34 Score=329.52 Aligned_cols=208 Identities=24% Similarity=0.315 Sum_probs=173.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCC--
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD-- 235 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 235 (1441)
++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999998 9999999998765422 35699999986
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADT 314 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1441)
.+++.+||+||+.+....... .. ..+....++.+++.+||+ ...+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS---------LD------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CC------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 456789999999875431100 00 001123456789999996 66777
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+.+.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQ-AFGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHHHhcE
Confidence 6655 999999999999999999999999999999999999999999998754 3356777788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998764
No 333
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=328.41 Aligned_cols=206 Identities=33% Similarity=0.506 Sum_probs=174.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999998764332 35699999998887889
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.++....+. . . ++....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~--~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGL--S--------R------------------------AEDDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCC--C--------c------------------------HHHHHHHHHHHHHcCCHhHhcCCccc---
Confidence 999999886432110 0 0 00112356789999999888888776
Q ss_pred cCCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 322 RGVSGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~------~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
|||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.+. .+.+|++++|+.+++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHE-RGLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhcCEE
Confidence 9999999999999999 599999999999999999999999999987533 3566777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 334
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=323.99 Aligned_cols=200 Identities=24% Similarity=0.381 Sum_probs=169.0
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1441)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999998 9999999998754322 357999999987776 69
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVGDEMR 321 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1441)
|+||+.++....+. ....++.+++.+||+ +..++.+++
T Consensus 93 v~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~--- 131 (241)
T PRK14250 93 VKDNIEYGPMLKGE--------------------------------------KNVDVEYYLSIVGLNKEYATRDVKN--- 131 (241)
T ss_pred HHHHHhcchhhcCc--------------------------------------HHHHHHHHHHHcCCCHHHhhCCccc---
Confidence 99999875322100 011245678899996 456666654
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||+||+|++.+|++|+|||||+|||..++..+.+.|+++.. ..+++|+.++|+.+++.+++|+|++|++|
T Consensus 132 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 132 --LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKN-KMNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hCCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999998754 33556777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 335
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.6e-34 Score=342.03 Aligned_cols=194 Identities=25% Similarity=0.389 Sum_probs=168.7
Q ss_pred ceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc-------cccceEEEEeccCCCCCCCCCH
Q 000529 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 946 (1441)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 946 (1441)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998653 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
+||+.|+.... ...+.++.++++++.++|.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12234456889999999998888764 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999875 899999999986 57788999999985 899999886
No 336
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4.5e-33 Score=359.42 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=101.9
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCC---CeeEE
Q 000529 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANP---SIIFM 1019 (1441)
Q Consensus 944 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p---~iLlL 1019 (1441)
+||.|++.|...+. . .....+.++.+||.. ..+..+ ..||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78888888765432 0 112357899999976 345543 469999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 000529 1020 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPL 1081 (1441)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~-----~gG~~v~~G~~ 1081 (1441)
||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346899999994 47999999986
No 337
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=326.16 Aligned_cols=215 Identities=26% Similarity=0.293 Sum_probs=174.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--Cc-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 919 (1441)
.+.++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 377889887763 2469999999999999999999999999999999999632 21 1379999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87632 123567999999988877 899999987654321 1122333456788899998753 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 338
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.4e-34 Score=321.82 Aligned_cols=196 Identities=24% Similarity=0.355 Sum_probs=167.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999988 9999999998764321 35799999998888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+||+||+.+.....+.. .++....++.+++.+||.+..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGAS----------------------------------GDDIRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCchh
Confidence 9999999999865432210 001112356688999998877877765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. .++++++++|+.+++..++|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998743 3567777899999999999999999
Q ss_pred cCCeEE
Q 000529 399 SDGQIV 404 (1441)
Q Consensus 399 ~~G~iv 404 (1441)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 339
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=325.80 Aligned_cols=215 Identities=20% Similarity=0.232 Sum_probs=175.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
-+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 467888887652 246999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|++||+.|....... ......+++++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999998887 8999999886543211 122344456788999998853 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
...||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 356999999999999999999999999999999999999999999999876 699999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 899999886
No 340
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=325.29 Aligned_cols=215 Identities=21% Similarity=0.287 Sum_probs=174.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887653 236999999999999999999999999999999999964311 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+ ..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 124567999999988887 8999999886543211 123334556788889988753 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. .+.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999854 899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 341
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.03 Aligned_cols=221 Identities=23% Similarity=0.311 Sum_probs=176.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1441)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999998 9999999998765432 2358999999999999
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++....... +...... +. + .. .....+....++.+++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~~-~--~~-------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------KT-P--AF-------RRAESEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------cc-c--cc-------ccchhHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999864321000 0000000 00 0 00 000011223466789999998888887766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++|+.++|+.+++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3356777788999999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 342
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=341.22 Aligned_cols=191 Identities=24% Similarity=0.377 Sum_probs=167.2
Q ss_pred ceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc-------cccceEEEEeccCCCCCCCCCH
Q 000529 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 946 (1441)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 946 (1441)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.+||++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998653 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
+||+.|+.. ...++.++++++.+||.+..++.+ ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345789999999988877764 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+..
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 999999999999999865 899999999986 67889999999985 8999999863
No 343
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=319.02 Aligned_cols=191 Identities=25% Similarity=0.377 Sum_probs=162.8
Q ss_pred ceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc-------cccceEEEEeccCCCCCCCCCH
Q 000529 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 946 (1441)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 946 (1441)
|||+++++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998653 47999999987531 1235579999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
.||+.+..... .....++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456788999999987766654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999875 899999999986 46678999999985 7887765
No 344
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=327.14 Aligned_cols=215 Identities=21% Similarity=0.264 Sum_probs=175.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--Cc-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478899887653 2469999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 990 (1441)
.+... ...++.+||++|++.+++. |++||+.+....+. ....++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87632 1345679999999888875 99999987644321 11223344567888999998542 2333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
...||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 356999999999999999999999999999999999999999999999865 799999999986 5778899999997
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 5 899999885
No 345
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.8e-33 Score=359.02 Aligned_cols=208 Identities=29% Similarity=0.407 Sum_probs=176.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++||+|+++. +++++|+|+|++|+|||.+||+|+||||||||+|+|+|..++ .+|+|.+||.+.
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEc
Confidence 6899999998842 234699999999999999999999999999999999998763 489999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+. .|+.+|..|
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 54 456788999999999886 59999997642 1 22 2346778888887654 356666544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999886 589999999985 5677999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999985
No 346
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=336.48 Aligned_cols=215 Identities=17% Similarity=0.190 Sum_probs=173.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCeeCCCCCc-------cceEEEEcCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL-KVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1441)
...+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~ 98 (330)
T PRK15093 19 WVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEP 98 (330)
T ss_pred CEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCc
Confidence 3569999999999999999999999999999999999986411 128999999999865432 23699999987
Q ss_pred C--CCCCCCHHHHHHHHhHhcCC-CchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc--
Q 000529 236 N--HIGEMTVRETLAFAARCQGV-GTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI-- 310 (1441)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1441)
. +.+.+||.+++.+....... +..+ + ...+....+.++|+.+||++
T Consensus 99 ~~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~-------------~~~~~~~~~~~~L~~~gL~~~~ 149 (330)
T PRK15093 99 QSCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q-------------RFGWRKRRAIELLHRVGIKDHK 149 (330)
T ss_pred chhcCccccHHHHHHHHHHhhhcccccc----------------c-------------cHHHHHHHHHHHHHHCCCCChH
Confidence 4 57889999999864321100 0000 0 00011234677899999975
Q ss_pred -ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHH
Q 000529 311 -CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1441)
Q Consensus 311 -~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1441)
..++.+.+ |||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.. ..+.++++++|+..++.
T Consensus 150 ~~~~~~p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~ 223 (330)
T PRK15093 150 DAMRSFPYE-----LTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLS 223 (330)
T ss_pred HHHhCCchh-----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHH
Confidence 34555554 999999999999999999999999999999999999999999998754 34667888999999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHH
Q 000529 390 NLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 390 ~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|+|++|.+|++++.|+.+++.
T Consensus 224 ~~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 224 QWADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred HhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999998774
No 347
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3.8e-34 Score=312.89 Aligned_cols=190 Identities=49% Similarity=0.851 Sum_probs=161.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCC--CCceEEEEEEEcCc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGDIRISGY 920 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 920 (1441)
.+.++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 477889888764210 001246999999999999999999999999999999999986 5 45899999998
Q ss_pred cCCccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000529 921 PKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1441)
Q Consensus 921 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1000 (1441)
+......++.++|++|++.+++.+|++||+.+...+. .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754345677999999998888999999997643110 399999
Q ss_pred HHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1001 rqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986457788999999985 7888764
No 348
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=325.67 Aligned_cols=219 Identities=20% Similarity=0.252 Sum_probs=173.6
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--c-eEEEEEEEcCc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRISGY 920 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~ 920 (1441)
-+++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35667776552 24699999999999999999999999999999999997541 1 24799999998
Q ss_pred cCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000529 921 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1441)
Q Consensus 921 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 995 (1441)
+... ...++.++|++|++.+++. |+.||+.+....+. ........++.++++++.+++.+........ .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999888875 99999987643331 1112233445678899999996522111111 1356
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999985 899
Q ss_pred EEEcCC
Q 000529 1076 VYVGPL 1081 (1441)
Q Consensus 1076 v~~G~~ 1081 (1441)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 349
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.5e-34 Score=329.10 Aligned_cols=223 Identities=20% Similarity=0.257 Sum_probs=178.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++++..+.. +...+.+++|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 788999887742100 0000124699999999999999999999999999999999998763 4799999998764
Q ss_pred cc---ccceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCC
Q 000529 924 QE---TFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~---~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.++|++|++. +.+.+|+.|++.+...... ........+.++++++.++|. +..+..+ ..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhcC
Confidence 21 22356999999875 5677899999987654432 122334455688999999994 5555543 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v 1076 (1441)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57778999999984 8999
Q ss_pred EEcCC
Q 000529 1077 YVGPL 1081 (1441)
Q Consensus 1077 ~~G~~ 1081 (1441)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88875
No 350
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=329.14 Aligned_cols=204 Identities=22% Similarity=0.300 Sum_probs=171.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC-CCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1441)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999999988 9999999998764322 357999999874 67888
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||++|+.|.....+.. ..+....++.+++.+||.+..++.+++
T Consensus 100 ~v~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------------------------------YDEMHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCCccc---
Confidence 9999998875432110 001122456789999998888877765
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.. +|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 335566667788888875 9999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 351
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=358.70 Aligned_cols=218 Identities=25% Similarity=0.336 Sum_probs=183.1
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|++++++ ++.+|+|+||+|++||++||+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 77888887652 34699999999999999999999999999999999998653 4799999998763
Q ss_pred cc----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 924 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ..++.++|++|++.+++.+||+|++.++...+.. ...+.++.+++++++++.+||.+..++.++ .|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCH
Confidence 21 1235699999999889999999999886432211 112233344568899999999988777654 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++.|.|||++||+++ ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 899999
Q ss_pred cCCCC
Q 000529 1079 GPLGH 1083 (1441)
Q Consensus 1079 G~~~~ 1083 (1441)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98764
No 352
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=328.28 Aligned_cols=210 Identities=25% Similarity=0.388 Sum_probs=174.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999987 9999999998754322 35699999998888999
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||.||+.++..... +. . +. + ..+....++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~~-------~-------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-------L-------GR-F--------------GAADREKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-cc-------c-------cC-C--------------CHHHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 00 0 00 0 000123456789999998888888776
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|++++. ..+++|+.++|+.+++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~-~~~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQ-ERGLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 33566777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987753
No 353
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=326.18 Aligned_cols=216 Identities=22% Similarity=0.284 Sum_probs=176.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc-e--EEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478889887763 246999999999999999999999999999999999975432 1 479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|++||+.+....+. .....+.++.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 123557999999998887 899999987654332 1122334456788899998843 33333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 456999999999999999999999999999999999999999999999865 699999999987 5788999999997
Q ss_pred c----CcEEEEEcCC
Q 000529 1071 R----GGREVYVGPL 1081 (1441)
Q Consensus 1071 ~----gG~~v~~G~~ 1081 (1441)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999986
No 354
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-34 Score=326.86 Aligned_cols=206 Identities=19% Similarity=0.293 Sum_probs=168.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCCC-----ccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998751 012899999999875321 23569999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1441)
++ +||+||+.|+.+..+.. . .+....++++++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------K------------------------KDLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 89999999875432210 0 00112356678888884 3455
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
+.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++.+++|
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~-~~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--K-DYTIVIVTHNMQQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--h-CCEEEEEECCHHHHHHhCC
Confidence 55554 99999999999999999999999999999999999999999999873 2 4677778899999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 355
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=329.93 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=170.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCCC-
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDN- 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999998 999999999875421 1356999999862
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
.+...||+||+.+.....+.. . ++....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 333579999999865332110 0 01122356788899997 456766
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|++++|+.+++.+++|++
T Consensus 143 ~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 PFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 665 999999999999999999999999999999999999999999998753 3 567777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 356
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.7e-34 Score=319.04 Aligned_cols=194 Identities=30% Similarity=0.441 Sum_probs=163.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC-CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999988 9999999998764322 357999999864 4678
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.++....+.. ..+....++.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------------------------------EEEIEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCcHhhhcCCccc--
Confidence 99999998865322110 000112356788999998877877765
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.+++|+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998754 3 56777789999999999999999999
Q ss_pred Ce
Q 000529 401 GQ 402 (1441)
Q Consensus 401 G~ 402 (1441)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 357
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=330.48 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=172.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC-CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1441)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 358999999999999999999999999999999999998872123999999998864322 357999999864 6778
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
+||+||+.|..+..+.. .++...+++.+++.+||++..++.+.+
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~~-- 143 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEPAN-- 143 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCccc--
Confidence 99999999865432110 011223467789999999888887765
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.. ..+++|++++|+.+++ ..+|++++|++
T Consensus 144 ---LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 144 ---LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKK-KNNLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3356666778888887 57999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 358
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=328.64 Aligned_cols=205 Identities=27% Similarity=0.345 Sum_probs=171.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCC--CC---ccceEEEEcCCCC-CC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE--FV---PERTAAYISQHDN-HI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1441)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .. .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999998 9999999998742 11 1357999999864 34
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
...|+.||+.+.....+.. ..+....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------------------------------EAEITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhcCCchh
Confidence 5678999998864432110 001112356789999998888887766
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 456777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 359
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=334.33 Aligned_cols=221 Identities=19% Similarity=0.228 Sum_probs=178.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.+.++|+++.+.. +.+.+|+|||++|++||++||+||||||||||+++|+|.... .+..|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5889999987642 224699999999999999999999999999999999997531 23579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.++.. ...++.++||+|++.+++ .|++||+.|+.... .....+..++.++++++.++|.+..+..++.. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-GN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-cc
Confidence 98742 234667999999998775 79999999864321 11112223445678889988854333334332 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.+|++++|++ |+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-GW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 699999999986 46777999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
++..|++
T Consensus 302 i~e~g~~ 308 (329)
T PRK14257 302 IEEAGET 308 (329)
T ss_pred EEEeCCH
Confidence 9999987
No 360
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=324.11 Aligned_cols=215 Identities=23% Similarity=0.251 Sum_probs=174.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367788877652 346999999999999999999999999999999999975431 3479999999
Q ss_pred ccCCc----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000529 920 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGLP 991 (1441)
Q Consensus 920 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 991 (1441)
.+... ...++.++|++|++.+++ .||.||+.+...... ....+..++.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 87531 234567999999998887 899999987643321 1122333456778888888754 22333
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
...|||||||||+|||||+.+|+||+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.+|++++|++
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999975 699999999986 57788999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 361
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=323.36 Aligned_cols=203 Identities=23% Similarity=0.301 Sum_probs=165.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcceEEEECCeeCCCC--C---ccceEEEEcCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHD 235 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d 235 (1441)
++|+|+|+++++||+++|+|||||||||||++|+|..+ |+ +|+|.++|+++... . .++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 58999999999999999999999999999999999864 34 89999999987532 1 135799999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----c
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----C 311 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~ 311 (1441)
.+++ .||+||+.++....+.... ++....++.+++.+||.+ .
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221000 001123556788888854 2
Q ss_pred cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh
Q 000529 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1441)
Q Consensus 312 ~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l 391 (1441)
.++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++.++
T Consensus 143 ~~~~~~-----~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~tH~~~~~~~~ 214 (253)
T PRK14242 143 LHESAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--A-RYTIIIVTHNMQQAARV 214 (253)
T ss_pred hhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCeEEEEEecHHHHHHh
Confidence 344444 499999999999999999999999999999999999999999999873 2 35677788999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHH
Q 000529 392 FDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|+|++|++|+++..|+++++.
T Consensus 215 ~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 215 SDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988763
No 362
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=329.49 Aligned_cols=216 Identities=23% Similarity=0.301 Sum_probs=179.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++. .....+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4788999887631 012359999999999999999999999999999999999876 3579999999876
Q ss_pred Cc---cccceEEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.+||++|++. .++..||.||+.+..... ....++..++++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998765422 1233444456889999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 4 46999999985 79999
Q ss_pred EcCC
Q 000529 1078 VGPL 1081 (1441)
Q Consensus 1078 ~G~~ 1081 (1441)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 9875
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.9e-34 Score=321.80 Aligned_cols=201 Identities=25% Similarity=0.321 Sum_probs=166.6
Q ss_pred eeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc--eEEEEEEEcCccCCcccc-ceEEEEeccCCC--CCCCCC
Q 000529 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGDIRISGYPKKQETF-ARISGYCEQNDI--HSPFVT 945 (1441)
Q Consensus 871 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 945 (1441)
+|+|||+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999986531 157999999987654322 357999999974 556789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK---PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEP 1022 (1441)
+.|++.+...... ...+..++.++++++.+++. +..++.+ ..|||||||||+|||||+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977643321 11233445688999999997 3445543 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999986 57778999999985 899998875
No 364
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=323.32 Aligned_cols=214 Identities=22% Similarity=0.312 Sum_probs=174.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcCc
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 920 (1441)
++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887652 246999999999999999999999999999999999975421 25799999998
Q ss_pred cCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCC
Q 000529 921 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGLP 991 (1441)
Q Consensus 921 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~ 991 (1441)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7542 123567999999998887 899999988654321 11223344567888999998642 3333
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+.+||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 356999999999999999999999999999999999999999999999865 799999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 221 -G~i~~~g~~ 229 (250)
T PRK14262 221 -GELIEYGPT 229 (250)
T ss_pred -CEEEEecCH
Confidence 899998875
No 365
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=323.86 Aligned_cols=208 Identities=21% Similarity=0.311 Sum_probs=169.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCC--CCC---ccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMD--EFV---PERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. ... .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5899999999999999999999999999999999998862 113899999999875 221 235799999999899
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+.+||.||+.++....+.... .++....++++++.+||.. ..++
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDRLND 145 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhhhcc
Confidence 999999999987543211000 0011123566788888743 3445
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+++|+
T Consensus 146 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~ 217 (253)
T PRK14267 146 YPS-----NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDY 217 (253)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCE
Confidence 544 4999999999999999999999999999999999999999999998742 3 6677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
|++|++|++++.|+++++.
T Consensus 218 i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 218 VAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 366
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-34 Score=320.63 Aligned_cols=204 Identities=27% Similarity=0.434 Sum_probs=174.8
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCHHH
Q 000529 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1441)
Q Consensus 167 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1441)
+|+|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998865332 457999999998899999999
Q ss_pred HHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCC
Q 000529 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1441)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 325 (1441)
|+.++....+.. ..+....+.++++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------------------------------KKEIERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 999864322110 001112356688999999888888766 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000529 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1441)
Q Consensus 326 GGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~ 405 (1441)
|||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. ..+++++.++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~-~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRK-EFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998754 325667778888999999999999999999999
Q ss_pred EcCHHHHH
Q 000529 406 QGPRELVL 413 (1441)
Q Consensus 406 ~G~~~~~~ 413 (1441)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 367
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.5e-34 Score=319.19 Aligned_cols=197 Identities=25% Similarity=0.333 Sum_probs=170.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCCHH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1441)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999988 999999999875422 35799999998888899999
Q ss_pred HHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCC
Q 000529 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1441)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGL 324 (1441)
||+.+.....+.. ...+..+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 9998765432100 01245678999999888887766 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000529 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIV 404 (1441)
Q Consensus 325 SGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv 404 (1441)
|||||||+++|+|++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++.+++|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998743 3 456777888889999999999999999999
Q ss_pred EEcCHH
Q 000529 405 YQGPRE 410 (1441)
Q Consensus 405 ~~G~~~ 410 (1441)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999865
No 368
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.64 Aligned_cols=205 Identities=22% Similarity=0.292 Sum_probs=172.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC---ccceEEEEcCCCC-CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999998 999999999876432 2457999999963 6778
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
.||.||+.++....+.. . ++....++.+++.+||.+..++.++.
T Consensus 97 ~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------R------------------------EEMIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 99999998865422110 0 01112457788999998888877765
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 33566777888888886 6999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 369
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=324.89 Aligned_cols=221 Identities=22% Similarity=0.260 Sum_probs=177.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.++++|+++.+. +..+|+|+||++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478899987763 236999999999999999999999999999999999976531 1369999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.+... ...++.++|++|+..+++ .|+.||+.+...... .....+..+.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 134567999999988887 899999987643321 112233345678899999985422211111 235
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecC-
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1072 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~g- 1072 (1441)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||++. ++.+.+|++++|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 6999999999999999999999999999999999999999999999865 4899999999986 578899999999853
Q ss_pred ---cEEEEEcCC
Q 000529 1073 ---GREVYVGPL 1081 (1441)
Q Consensus 1073 ---G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 370
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=317.94 Aligned_cols=195 Identities=25% Similarity=0.394 Sum_probs=166.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1441)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999988 9999999998765432 357999999998899999999998
Q ss_pred HHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhh
Q 000529 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1441)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 328 (1441)
++...... . . .+....++++++.+||++..++.+.+ |||||
T Consensus 93 ~~~~~~~~-~--------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-L--------T-------------------------AEDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccC-c--------c-------------------------HHHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 75421100 0 0 00122456789999999888887765 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEc
Q 000529 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQG 407 (1441)
Q Consensus 329 rkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G 407 (1441)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+.+|+.++|+.+++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHA-ETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999998754 33566777899999999999999999999998764
No 371
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.03 Aligned_cols=216 Identities=24% Similarity=0.267 Sum_probs=174.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCce---EEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788887652 3469999999999999999999999999999999999764322 379999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1345679999999999998999999987643221 1122333455667777777642 33433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999864 799999999986 5777899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 372
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=358.62 Aligned_cols=219 Identities=26% Similarity=0.301 Sum_probs=182.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++++++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 377888887652 34699999999999999999999999999999999998653 479999999876
Q ss_pred Cccc----cceEEEEeccCCCCCCCCCHHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 923 KQET----FARISGYCEQNDIHSPFVTVYESLFYSAWLR----LPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 923 ~~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.... .++.++|++|++.+++.+||+||+.++.... .....+.++.+++++++++.+||.+..++.++
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~----- 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA----- 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----
Confidence 4311 2346999999998889999999998753211 00001223345668899999999887777654
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.|||||||||+||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 59999999999999999999999999999999999999999999999878999999999986 47778999999985 89
Q ss_pred EEEEcCCCC
Q 000529 1075 EVYVGPLGH 1083 (1441)
Q Consensus 1075 ~v~~G~~~~ 1083 (1441)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999998754
No 373
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.2e-34 Score=324.80 Aligned_cols=215 Identities=25% Similarity=0.266 Sum_probs=174.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc-
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP- 921 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 921 (1441)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 378888887653 24699999999999999999999999999999999998653 47999999987
Q ss_pred ----CCcc---c----cceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000529 922 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSL 987 (1441)
Q Consensus 922 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 987 (1441)
+... . .++.++|++|++. +.+.+|+.||+.+...... .....+.++.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346999999974 5677899999876432211 1122234556788999999964 45554
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeE
Q 000529 988 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1066 (1441)
Q Consensus 988 vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~v 1066 (1441)
+ ..||||||||++|||||+.+|+||+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3 469999999999999999999999999999999999999999999998765 899999999986 466789999
Q ss_pred EEEecCcEEEEEcCC
Q 000529 1067 FLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1067 llL~~gG~~v~~G~~ 1081 (1441)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899999875
No 374
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.3e-34 Score=324.39 Aligned_cols=208 Identities=27% Similarity=0.424 Sum_probs=174.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999999988 9999999998765432 34699999998778889
Q ss_pred CHHHHHHHHhH-hcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 242 TVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 242 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
||+||+.++.. .... . . . ...+....++.+++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~~~----------~------~-~--------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHRSL----------W------A-G--------------DSPHDAAVVDRALARTELSHLADRDMST-- 137 (256)
T ss_pred CHHHHHHhcchhhhhh----------c------c-C--------------CCHHHHHHHHHHHHHcCcHhhhcCCccc--
Confidence 99999988531 1000 0 0 0 0001122456789999998888888766
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+++|++++|+.+++.+++|+|++|++
T Consensus 138 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 138 ---LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998743 356777788999999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 000529 401 GQIVYQGPRELVL 413 (1441)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1441)
|+++.+|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999988763
No 375
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-34 Score=319.35 Aligned_cols=206 Identities=27% Similarity=0.368 Sum_probs=175.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999998 9999999998865432 4679999999988889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.+.....+.. .......++.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLP----------------------------------KAEIKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99998865432210 000112356789999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.. ..+.+|++++|+.+++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQK-ELGITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3355666688888999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 376
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.8e-33 Score=362.64 Aligned_cols=210 Identities=28% Similarity=0.401 Sum_probs=175.8
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++++|++|+++. .++++|+|+|++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 36899999998752 234699999999999999999999999999999999998763 47999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 991 (1441)
.++ ..+++.+|||+|++.+++ -|++||+.++. + +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 753 356788999999998885 69999997641 1 222 2346677777777653 35666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
| .+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 G-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred C-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 4 57999999999999999999999999999999999999999999986 4899999999985 4577999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 377
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.50 Aligned_cols=215 Identities=24% Similarity=0.272 Sum_probs=176.5
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 165 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN--- 165 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC---
Confidence 87642 1345679999999888875 99999987654321 1122233456788899998864 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ +.|||++||+++ ++.+.+|++++|+
T Consensus 166 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 166 --AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred --cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 356999999999999999999999999999999999999999999999976 799999999986 4778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 242 ~-G~i~~~g~~ 251 (272)
T PRK14236 242 M-GKLVEYGDT 251 (272)
T ss_pred C-CEEEecCCH
Confidence 5 899999875
No 378
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.7e-33 Score=317.38 Aligned_cols=173 Identities=24% Similarity=0.293 Sum_probs=135.8
Q ss_pred eeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCHHHHHH
Q 000529 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLF 951 (1441)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 951 (1441)
|+==.++|..||+++++||||-||||+.++|+|..++ .+|+ .. .-.++|-||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 3334577889999999999999999999999997663 2443 11 123678888655556789999775
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHH
Q 000529 952 YSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1031 (1441)
Q Consensus 952 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~ 1031 (1441)
-...-+.. ..-...++++-+.|.+..++.+. +|||||.|||+||.+|.+++++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 43221111 11234678889999999988764 6999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 1032 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 1032 ~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
..+-+.||+..++ ++|.+++-||... +--..|++++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999999864 8899999999753 444578888875
No 379
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.3e-34 Score=317.85 Aligned_cols=193 Identities=25% Similarity=0.345 Sum_probs=160.4
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCC
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
++++++|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+|
T Consensus 32 ~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~t 100 (224)
T cd03220 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELT 100 (224)
T ss_pred cCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCc
Confidence 455789999999999999999999999999999999999865 358999999976421 111233456799
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
|+||+.+...... ......++.++++++.+++.+..++.++ .||||||||++|||+|+.+|++|+|||||+|
T Consensus 101 v~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEP~~g 172 (224)
T cd03220 101 GRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPVK-----TYSSGMKARLAFAIATALEPDILLIDEVLAV 172 (224)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999987654321 2233445567889999999887777654 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 173 LD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 173 GDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 9999999999999999877899999999986 46678999999975 8888765
No 380
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=323.68 Aligned_cols=209 Identities=24% Similarity=0.320 Sum_probs=171.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++..... ++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 1138999999998764322 357999999988889
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----ccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADTM 315 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~ 315 (1441)
.+||+||+.++.+..+.... ..+....++++++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhhhcCC
Confidence 99999999987543211000 0011234567889999854 34555
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +++++.++|+.+++.+++|++
T Consensus 144 ~~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 144 AGK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--K-DMTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhcCEE
Confidence 554 99999999999999999999999999999999999999999999863 2 466777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999988764
No 381
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.1e-34 Score=318.95 Aligned_cols=200 Identities=27% Similarity=0.428 Sum_probs=163.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCC--CCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHI--GEMT 242 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999998 9999999987642 346799999987653 3489
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.++...... .+.. ...+....++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR----------------------------LSKADKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--cccC----------------------------CCHHHHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999986432100 0000 0001123467789999998888887766
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999998754 3567777899999999999999999875
Q ss_pred EEEEc
Q 000529 403 IVYQG 407 (1441)
Q Consensus 403 iv~~G 407 (1441)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 382
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-34 Score=324.16 Aligned_cols=209 Identities=26% Similarity=0.392 Sum_probs=173.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999987 9999999998754322 35699999998888889
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||.||+.++..-.. ..+. . ...+....++++++.+||++..++.+++
T Consensus 92 tv~~~i~~~~~~~~--~~~~----------------~------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLWG----------------R------------LSAEDNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred cHHHHHHhccchhh--hhcc----------------C------------CCHHHHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999988532000 0000 0 0001123456789999998888888766
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999999998653 3566777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987763
No 383
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=9.5e-34 Score=323.40 Aligned_cols=213 Identities=22% Similarity=0.284 Sum_probs=173.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc--eEEEEEEEcCc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGDIRISGY 920 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~ 920 (1441)
.++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578889887651 25899999999999999999999999999999999986531 15799999998
Q ss_pred cCCcccc-ceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCC
Q 000529 921 PKKQETF-ARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP---LRQSLVGLPGVN 994 (1441)
Q Consensus 921 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~ 994 (1441)
++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..++. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643222 356999999974 4466899998866443221 111 2356788999999976 33444 34
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999764 899999999986 46778999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 99998875
No 384
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=331.43 Aligned_cols=206 Identities=20% Similarity=0.303 Sum_probs=169.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCC----C----CccceEEEEcCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE----F----VPERTAAYISQHDN 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~ 236 (1441)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35899999999999999999999999999999999999987 9999999998742 1 11357999999863
Q ss_pred -CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccc
Q 000529 237 -HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADT 314 (1441)
Q Consensus 237 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1441)
.+...||+||+.|+....+.. .++....++.+++.++|+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------------------------------KQEAYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhcC
Confidence 233469999999865322110 001112356678899994 56777
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|++++|+.+++.+++|+
T Consensus 147 ~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiiiisH~~~~~~~~~d~ 220 (289)
T PRK13645 147 SPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNK-EYKKRIIMVTHNMDQVLRIADE 220 (289)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCE
Confidence 7665 999999999999999999999999999999999999999999998754 3356677789999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 385
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=322.98 Aligned_cols=206 Identities=18% Similarity=0.243 Sum_probs=166.6
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC--C---ccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... . .++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111289999999987421 1 145799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1441)
+ .||+||+.++...... .. .++....++++++.+||. +..++
T Consensus 107 ~-~tv~~nl~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEK-LS--------------------------------RAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCC-CC--------------------------------HHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 6 8999999986542210 00 001112356788888874 33455
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++. . +++|+.++|+.+++.+++|+
T Consensus 153 ~~~-----~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~-~~tiii~sH~~~~~~~~~d~ 224 (260)
T PRK10744 153 SGY-----SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--Q-DYTVVIVTHNMQQAARCSDY 224 (260)
T ss_pred CCC-----CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCCE
Confidence 444 499999999999999999999999999999999999999999999873 3 35677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 386
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=327.56 Aligned_cols=215 Identities=20% Similarity=0.264 Sum_probs=174.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899987763 2459999999999999999999999999999999999642 1 02579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 990 (1441)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988874 999999886543211 12233345677888888874 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 689999999986 4677899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 899999885
No 387
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-33 Score=316.10 Aligned_cols=211 Identities=23% Similarity=0.343 Sum_probs=174.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888765310 112579999999999999999999999999999999999765 35799999998764
Q ss_pred cc------ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999988888999999988654321 1233444567889999999987777664 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999976 4899999999975 4578999999975 654
No 388
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=325.94 Aligned_cols=215 Identities=21% Similarity=0.248 Sum_probs=174.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899987763 2469999999999999999999999999999999999642 1 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..++.
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1235679999999888874 99999987643221 1122233455778888888852 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999965 689999999986 4778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 389
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.4e-34 Score=322.61 Aligned_cols=213 Identities=25% Similarity=0.311 Sum_probs=171.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcceEEEECCeeCCCCCc----cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL--DPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 566 9999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVG 317 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg 317 (1441)
+.+||+|++.+.......... ... ....+....++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~------------------~~~---------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARG------------------EEP---------LDLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhcccc------------------ccc---------ccHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 999999999986542210000 000 00011123467789999997 45666654
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh-cCeEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL-FDDII 396 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l-~D~vi 396 (1441)
. .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++... +|+++
T Consensus 143 ~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 E----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred c----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 1 3999999999999999999999999999999999999999999998743 356677788989999888 89999
Q ss_pred EecCCeEEEEcCHHHHH
Q 000529 397 LLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 390
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-34 Score=286.05 Aligned_cols=202 Identities=28% Similarity=0.392 Sum_probs=174.5
Q ss_pred CccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-------cceEEEEc
Q 000529 160 STKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYIS 232 (1441)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1441)
......+||++|++.|++||-++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446788999999999999999999999999999999999999998 9999999999876543 26799999
Q ss_pred CCCCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccc
Q 000529 233 QHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICA 312 (1441)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1441)
|...++|+||-.||+...+.++|-+.+ +....+...|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999998887763211 0112345679999999988
Q ss_pred ccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhc
Q 000529 313 DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLF 392 (1441)
Q Consensus 313 dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~ 392 (1441)
+.+++. |||||+|||+||||+...|+|||.||||-.||..|..+|.+.|-.+.+ ..+++.+.++|+. .....|
T Consensus 141 ~HyP~q-----LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD~-~LA~Rc 213 (228)
T COG4181 141 THYPAQ-----LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHDP-QLAARC 213 (228)
T ss_pred ccCccc-----cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCCH-HHHHhh
Confidence 888776 999999999999999999999999999999999999999999987765 4567777788764 566789
Q ss_pred CeEEEecCCeEEE
Q 000529 393 DDIILLSDGQIVY 405 (1441)
Q Consensus 393 D~vilL~~G~iv~ 405 (1441)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 391
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.1e-33 Score=361.28 Aligned_cols=210 Identities=24% Similarity=0.389 Sum_probs=175.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++|+++. ++++|+|+|++|+|||.+||+||||||||||+++|+|...+ .+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEEH
Confidence 6899999998741 23699999999999999999999999999999999998763 579999999886
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
.+ ..+++.+|||+|++.+++ -|++||+.++.. .+.+. +.+.++++..++.+. .|+.+|..|
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred HHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 43 456788999999999886 499999987521 12222 335667777766543 366676543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 569999999999999999999999999999999999999999999985 4899999999985 5678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 899999985
No 392
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=331.24 Aligned_cols=211 Identities=20% Similarity=0.283 Sum_probs=170.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
.++|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.+
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 01289999999998632 224679999999876
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
+ +.||+||+.|+....+.. . .+.....++.+++..+|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~----------~-----------------------~~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIN----------D-----------------------RKILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCC----------h-----------------------HHHHHHHHHHHHHHcCCcchhhhhhh
Confidence 6 589999999875432110 0 00111234556777777554445554
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
+.+..|||||||||+||||++.+|+||+|||||+|||+.+...+.+.|+++.. +.++++++|....+.+.+|+|++
T Consensus 221 -~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 -KAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred -CCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 34556999999999999999999999999999999999999999999998642 36777789999999999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 000529 398 LSDGQIVYQGPRELVL 413 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1441)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999885
No 393
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=7.9e-34 Score=326.17 Aligned_cols=207 Identities=23% Similarity=0.269 Sum_probs=172.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCC--CCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN--HIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999998 9999999998753221 246999999864 567
Q ss_pred CCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccccccc
Q 000529 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVGD 318 (1441)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1441)
.+||.|++.+..+.... .. ..+....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LE------------------------PEQREKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccC---------CC------------------------HHHHHHHHHHHHHHcCCChHHHhcCchh
Confidence 88999999886543210 00 001122456789999994 666766655
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|++++|+.+++.+++|++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQE-KQGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999998754 33566777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 394
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.41 Aligned_cols=207 Identities=21% Similarity=0.312 Sum_probs=167.4
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC--C---ccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1441)
.+|+|+|++|+||++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... . .++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5899999999999999999999999999999999998741 01289999999987532 1 235799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+. ||.||+.++....+.... + .+....++.+++.+||.+ ..++
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 159 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRLHE 159 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHhhC
Confidence 74 999999987543221000 0 001123567888999964 2344
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+++|+
T Consensus 160 ~~~-----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~ 231 (267)
T PRK14235 160 PGT-----GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQR 231 (267)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999998742 3 5677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++.+|+.+++.
T Consensus 232 v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 232 TAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 395
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=326.77 Aligned_cols=210 Identities=23% Similarity=0.387 Sum_probs=174.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999998765332 35699999999888899
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+||+.++..-.. + ... . ..+.....++.+++.+||++..++.+.+
T Consensus 97 tv~~~~~~~~~~~~-~----~~~-------------~------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 97 TVQELVARGRYPHQ-P----LFT-------------R------------WRKEDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred cHHHHHHhCccccc-c----ccc-------------C------------CCHHHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987531000 0 000 0 0000122456789999998877877765
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|++++|+..++.+++|++++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNR-EKGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 33567777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 000529 402 QIVYQGPRELVL 413 (1441)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1441)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 396
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=322.25 Aligned_cols=215 Identities=26% Similarity=0.267 Sum_probs=175.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477888887653 346999999999999999999999999999999999964321 1379999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..++.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87642 2235679999999988874 999999987544321 122334456788888888753 22333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999975 689999999986 4677899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 5 899998885
No 397
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.8e-34 Score=314.80 Aligned_cols=199 Identities=22% Similarity=0.329 Sum_probs=168.5
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-ccceEEEEcCCCCCCCCCCHHH
Q 000529 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-PERTAAYISQHDNHIGEMTVRE 245 (1441)
Q Consensus 167 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1441)
+++|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 457999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCC
Q 000529 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1441)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLS 325 (1441)
|+.+....... .. .+....++++++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGLK-LN---------------------------------AEQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccCC-cc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 99875321100 00 00112356789999998888887765 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000529 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1441)
Q Consensus 326 GGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~ 405 (1441)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|++++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998754 335677778899999999999999999999998
Q ss_pred EcC
Q 000529 406 QGP 408 (1441)
Q Consensus 406 ~G~ 408 (1441)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 398
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-33 Score=319.26 Aligned_cols=206 Identities=26% Similarity=0.413 Sum_probs=175.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999987 9999999998765433 3579999999988889999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.+..+..+.. . ......++++++.++|....++.+++
T Consensus 90 ~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------K------------------------AKIKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 99999865432110 0 00112346788999998878877765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000529 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~i 403 (1441)
||||||||++||++++.+|++++|||||+|||..+...+.+.|++... ..+.+|+.++|..+++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998654 3356666788888999999999999999999
Q ss_pred EEEcCHHHHH
Q 000529 404 VYQGPRELVL 413 (1441)
Q Consensus 404 v~~G~~~~~~ 413 (1441)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 399
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=319.60 Aligned_cols=201 Identities=24% Similarity=0.416 Sum_probs=171.5
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1441)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998765332 357999999998899999999998
Q ss_pred HHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccCCChhh
Q 000529 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1441)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rGLSGGq 328 (1441)
++... ... .. ......++++++.+||++..++.+++ |||||
T Consensus 94 ~~~~~-~~~--------~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--------LN-------------------------AAQREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccC--------CC-------------------------HHHHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 000 00 00123467789999999888888876 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEEcC
Q 000529 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 408 (1441)
Q Consensus 329 rkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~iv~~G~ 408 (1441)
||||+||++++.+|++++|||||+|||..++..+.+.|+++.+ ..++++++++|+.+++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQ-ERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998754 335567778899999999999999999999999999
Q ss_pred HHHHH
Q 000529 409 RELVL 413 (1441)
Q Consensus 409 ~~~~~ 413 (1441)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88765
No 400
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.08 Aligned_cols=219 Identities=19% Similarity=0.226 Sum_probs=176.2
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--c-eEEEEEEEc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRIS 918 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 918 (1441)
..+..+++++.+ +++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 346666666554 345799999999999999999999999999999999997642 1 257999999
Q ss_pred CccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000529 919 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1441)
Q Consensus 919 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 993 (1441)
|.+... ...++.++|++|++.++ .+|+.||+.+....+. . ....++.++++++.+++.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987632 13456799999998877 5999999988764432 1 122345688899999986533222221 24
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe---
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1070 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~--- 1070 (1441)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5799999999999999999999999999999999999999999999995 4799999999986 4778899999996
Q ss_pred ----cCcEEEEEcCC
Q 000529 1071 ----RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ----~gG~~v~~G~~ 1081 (1441)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999985
No 401
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=321.57 Aligned_cols=215 Identities=24% Similarity=0.324 Sum_probs=174.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--c-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 919 (1441)
.+.++|++++++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ . +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 377889887763 24699999999999999999999999999999999997641 1 2579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .||+||+.+...... ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988776 799999987643321 1122333456788899999852 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 356999999999999999999999999999999999999999999999864 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 402
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=9.8e-34 Score=354.50 Aligned_cols=220 Identities=23% Similarity=0.353 Sum_probs=180.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|++++++ ++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 46778877652 34699999999999999999999999999999999997653224799999998764
Q ss_pred ccc----cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCC
Q 000529 924 QET----FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLR-QSLVGLPGVNGLS 997 (1441)
Q Consensus 924 ~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 997 (1441)
... .++.+||++|++.+++.+||.|++.+....+... ....+..+++++++++.+++.+.. ++.+ ..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 311 2356999999998889999999998764332111 122334456688999999997654 3443 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||||+||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||++||+++ .+.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57778999999985 79999
Q ss_pred EcCCCC
Q 000529 1078 VGPLGH 1083 (1441)
Q Consensus 1078 ~G~~~~ 1083 (1441)
.|+..+
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 998754
No 403
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.1e-34 Score=367.93 Aligned_cols=209 Identities=24% Similarity=0.388 Sum_probs=174.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+|+++.+. +++++|+|+|++++||+.+||+||||||||||+++|+|.. + .+|+|.+||.+.
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 589999986542 1246999999999999999999999999999999999987 4 379999999887
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-------LRQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 992 (1441)
.+ ..+++.++||+|++.++. -|++||+.++. ++.+. +.++++++..++.+ -.|+.+|..|
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 54 456788999999998886 59999998752 12333 34566677766654 2367777654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 484 -~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~- 558 (588)
T PRK11174 484 -AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD- 558 (588)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999885 5899999999985 5678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 899999874
No 404
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.00 Aligned_cols=219 Identities=20% Similarity=0.228 Sum_probs=174.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888887653 246999999999999999999999999999999999976531 2369999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+........ ...
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 1345679999999988875 999999887543311 11222345577788888875321111111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 699999999999999999999999999999999999999999999985 5899999999986 57788999999974 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999875
No 405
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=326.75 Aligned_cols=218 Identities=23% Similarity=0.388 Sum_probs=174.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 478889887763 124699999999999999999999999999999999998653 579999999876
Q ss_pred CccccceEEEEeccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 923 KQETFARISGYCEQNDIHS--PFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
.....++.++|++|++.+. ...+++|++.++...... ........++.++++++.+||.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234689999997653 234788888654211000 011112234457889999999887777654 59999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEc
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G 1079 (1441)
||||++|||||+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999776 4 8999999
Q ss_pred CCC
Q 000529 1080 PLG 1082 (1441)
Q Consensus 1080 ~~~ 1082 (1441)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 406
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=320.17 Aligned_cols=207 Identities=21% Similarity=0.309 Sum_probs=167.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCCC-----ccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1441)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998751 013899999999875321 14569999999887
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1441)
++ +||+||+.|.....+... ..+....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKD---------------------------------KKELDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCc---------------------------------HHHHHHHHHHHHHHcCCchhhhhHhh
Confidence 77 899999998754322100 001112345678888874 3345
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
+.++ .|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++.. + .++++++|+.+++.+++|
T Consensus 143 ~~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 KSAL-----KLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 5444 4999999999999999999999999999999999999999999998743 3 567778888999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998874
No 407
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=311.43 Aligned_cols=196 Identities=27% Similarity=0.404 Sum_probs=172.8
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1441)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|++|||+|+..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775799999999999999999999999999 999999998764321 2588999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+-||.|+..... ....+++...||++|..+.+++.
T Consensus 93 VrgNL~YG~~~~~----------------------------------------~~~fd~iv~lLGI~hLL~R~P~~---- 128 (352)
T COG4148 93 VRGNLRYGMWKSM----------------------------------------RAQFDQLVALLGIEHLLDRYPGT---- 128 (352)
T ss_pred Eecchhhhhcccc----------------------------------------hHhHHHHHHHhCcHHHHhhCCCc----
Confidence 9999999854210 01246788999999999999877
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
|||||||||+|||||.+.|++|+||||.+.||-....+|+-.|.++..+ -..-|+.++|..+|+.+++|+|++|++|+
T Consensus 129 -LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred -cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 9999999999999999999999999999999999999999999988653 45667889999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 000529 403 IVYQGPRELVLE 414 (1441)
Q Consensus 403 iv~~G~~~~~~~ 414 (1441)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998853
No 408
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=314.63 Aligned_cols=201 Identities=23% Similarity=0.293 Sum_probs=171.2
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|++++++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478889887642 24699999999999999999999999999999999998653 479999999876
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
.....++.++|++|++.+++.+|+.||+.+....+. . ..++.++++++.++|.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999987654321 1 12345678899999987777764 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999999888999999999987 5888999999985
No 409
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.9e-34 Score=325.67 Aligned_cols=216 Identities=23% Similarity=0.314 Sum_probs=175.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC--------ccceEEEEcCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--------PERTAAYISQHDN 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 236 (1441)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45999999999999999999999999999999999999875223699999999875321 1346999999988
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
+++.+||+||+.++...... ..... ... ...+....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc---------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 89999999999876421100 00000 000 00111234677899999998888877
Q ss_pred ccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
++ |||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+ .++++|++++|+.+++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQ-NDGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 76 999999999999999999999999999999999999999999998764 335777778999999999999999
Q ss_pred EecCCeEEEEcCHHHH
Q 000529 397 LLSDGQIVYQGPRELV 412 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~ 412 (1441)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 410
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=322.05 Aligned_cols=219 Identities=24% Similarity=0.289 Sum_probs=177.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.+.++|++++++ ++.+|+|||++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899988763 34699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000529 920 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1441)
Q Consensus 920 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 995 (1441)
.+... ...++.++|++|++.+++ .|++||+.+...... ..+.++.+..+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 124567999999988887 899999987643221 12333444556788999998653221111 12456
Q ss_pred CCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEE
Q 000529 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1441)
Q Consensus 996 LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~ 1075 (1441)
||||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999976 589999999986 57788999999985 899
Q ss_pred EEEcCC
Q 000529 1076 VYVGPL 1081 (1441)
Q Consensus 1076 v~~G~~ 1081 (1441)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 411
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.9e-34 Score=312.88 Aligned_cols=199 Identities=22% Similarity=0.297 Sum_probs=164.3
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 45677776652 34699999999999999999999999999999999998663 4799999998754
Q ss_pred c--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000529 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 924 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1001 (1441)
. ...++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999988889999999988654321 1 12346788999999987777654 46999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
||++||+||+++|++|+|||||+|||+.++..+++.|++++++|.|||++||+++ .+.+.-++++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999999877899999999986 344433555544
No 412
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=9.4e-34 Score=354.47 Aligned_cols=212 Identities=21% Similarity=0.317 Sum_probs=180.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++++++ ++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378899988763 34699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc---c-cceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQE---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
... . .++.+||++|++.+++.+||+|++.+.... ....++.++++++.++|.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSAG-----SLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCChh-----hCCH
Confidence 431 1 124589999999999999999999875311 12334567899999999887777654 5999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 47788999999985 899999
Q ss_pred cCCCC
Q 000529 1079 GPLGH 1083 (1441)
Q Consensus 1079 G~~~~ 1083 (1441)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 98753
No 413
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=320.03 Aligned_cols=215 Identities=23% Similarity=0.303 Sum_probs=173.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--Cc-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 919 (1441)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 377888887653 2469999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87631 134567999999988887 6999999886543321 112222345677888887642 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999976 589999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 414
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=319.16 Aligned_cols=208 Identities=21% Similarity=0.290 Sum_probs=169.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
..+|+|+|++|++||+++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111289999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----ccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 313 (1441)
++.+||+||+.++.+..+... ..+....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------------------------------RSEADEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhHHhh
Confidence 999999999987644221000 0001123567788888854 234
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
+.++ .|||||||||+||++++.+|++|+|||||+|||..++..+.+.|+++.. + ++|++++|+.+++.++||
T Consensus 144 ~~~~-----~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 215 (252)
T PRK14256 144 SNAM-----ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSD 215 (252)
T ss_pred CCcC-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCC
Confidence 4444 4999999999999999999999999999999999999999999998743 3 567778899999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 415
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.8e-34 Score=316.31 Aligned_cols=195 Identities=25% Similarity=0.389 Sum_probs=164.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCC--C---ccceEEEEcCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHIG 239 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~ 239 (1441)
.++|+++|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... . .++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999987 99999999987421 1 1357999999998888
Q ss_pred CCCHHHHHHHHhH-hcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 240 EMTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
.+||+||+.++.. ..+.. ..+....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------------------------------KAEAEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhhCccc
Confidence 9999999988642 11100 001122356788999998888887765
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
|||||||||+||++++.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.+++|++++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 556777889999999999999999
Q ss_pred cCCeE
Q 000529 399 SDGQI 403 (1441)
Q Consensus 399 ~~G~i 403 (1441)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 416
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.2e-34 Score=311.92 Aligned_cols=195 Identities=27% Similarity=0.323 Sum_probs=165.0
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4567776542 34699999999999999999999999999999999998653 47999999987532
Q ss_pred --cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 925 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
..+++.++|++|++.+++.+|++||+.+.... . .+++++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456799999999888899999999875311 1 2345788999999988777664 469999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEE
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL 1069 (1441)
|++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998877999999999986 577788998876
No 417
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.8e-33 Score=319.49 Aligned_cols=220 Identities=24% Similarity=0.287 Sum_probs=175.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378888887652 2469999999999999999999999999999999999621113579999999876
Q ss_pred Ccc---ccce-EEEEeccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000529 923 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLFYSAWLRLP----PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1441)
Q Consensus 923 ~~~---~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 993 (1441)
... ..++ .++|++|++.+++.+|+.|++.+....... ......+..+.+.++++.+++. +..++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998765432110 0111223345678899999997 34555432
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHh-hCeEEEEecC
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1072 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~-~D~vllL~~g 1072 (1441)
.+|||||||||+||+||+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|+ +
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~-~ 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQ-N 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEe-C
Confidence 249999999999999999999999999999999999999999999999877999999999976 34444 79999997 4
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999986
No 418
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=318.14 Aligned_cols=205 Identities=19% Similarity=0.262 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 238 (1441)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 368999999999999999999999999999999999975 45 8999999998865422 35799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+ .||+||+.++...++.... .......++.+++.+||.. ..+.
T Consensus 92 ~-~tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKLKQ 138 (246)
T ss_pred c-ccHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHhcC
Confidence 6 6999999986543211000 0011223567889999953 2333
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+ +.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . ++++++++|+.+++.+++|+
T Consensus 139 ~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~ 210 (246)
T PRK14269 139 NA-----LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADY 210 (246)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcE
Confidence 33 4599999999999999999999999999999999999999999999863 2 46777788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|++++.|+.+++.
T Consensus 211 i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 211 TAFFHLGELIEFGESKEFF 229 (246)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 419
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2e-33 Score=322.79 Aligned_cols=225 Identities=24% Similarity=0.312 Sum_probs=178.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.+.... ..+. ..++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67788887763100 0000 013579999999999999999999999999999999999765 35899999998754
Q ss_pred cc------ccceEEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000529 924 QE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 994 (1441)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+|+. +..++.+ .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 21 2356799999997 3567789999987653211 1123344455688999999996 4556553 4
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|+ +|
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NG 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CC
Confidence 69999999999999999999999999999999999999999999999765 899999999986 5777899999997 48
Q ss_pred EEEEEcCCCC
Q 000529 1074 REVYVGPLGH 1083 (1441)
Q Consensus 1074 ~~v~~G~~~~ 1083 (1441)
++++.|+..+
T Consensus 229 ~i~~~g~~~~ 238 (268)
T PRK10419 229 QIVETQPVGD 238 (268)
T ss_pred EEeeeCChhh
Confidence 9999998643
No 420
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=320.21 Aligned_cols=206 Identities=20% Similarity=0.313 Sum_probs=166.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999987 3212389999999987531 1135799999998877
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+. ||+||+.|..+..+... .++....++.+++.+||.+ ..++
T Consensus 106 ~~-tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l~~ 151 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKN---------------------------------KKKLQEIVEKSLKDVALWDEVKDRLHT 151 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhhhhC
Confidence 75 99999988644321100 0011123556788888853 2344
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++. . +.+++.++|+.+++.+++|+
T Consensus 152 ~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~ 223 (259)
T PRK14274 152 QAL-----SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--E-KYTIVIVTHNMQQAARVSDQ 223 (259)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEEcCHHHHHHhCCE
Confidence 444 499999999999999999999999999999999999999999999863 2 35677788889999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++.+|+++++.
T Consensus 224 i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 224 TAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998764
No 421
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.3e-34 Score=324.14 Aligned_cols=209 Identities=26% Similarity=0.389 Sum_probs=161.7
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHh
Confidence 56777766531 124699999999999999999999999999999999998653 47999999987532
Q ss_pred ---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000529 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRK-----MFIEEVMELV--ELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 925 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 994 (1441)
...++.++|++|++.+++ .||.||+.+... ........ ...++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987764 699999976421 11111111 0112333333 333333332 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|+++ .+ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999964 899999999986 34 56999999985 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999875
No 422
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=318.30 Aligned_cols=206 Identities=22% Similarity=0.331 Sum_probs=166.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 5222389999999987432 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+ +||+||+.++....+... .+.....++.+++.+|+.. ..+.
T Consensus 99 ~-~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKD---------------------------------KQVLDEAVEKSLKGASIWDEVKDRLHD 144 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHHHHHcCCchhHHHHHhc
Confidence 6 899999998754322100 0001123456778888743 2344
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ + .+|+.++|+.+++.+++|+
T Consensus 145 ~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 216 (252)
T PRK14239 145 SAL-----GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDR 216 (252)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999998742 3 5677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
|++|++|++++.|+.+++.
T Consensus 217 i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 217 TGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 423
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=324.29 Aligned_cols=213 Identities=23% Similarity=0.276 Sum_probs=173.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899987763 24699999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999888775 99999987654332 122 23456888999999853 33433
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEE-EE
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1069 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vl-lL 1069 (1441)
+..||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 346999999999999999999999999999999999999999999999976 489999999986 5677899976 45
Q ss_pred ecCcEEEEEcCC
Q 000529 1070 KRGGREVYVGPL 1081 (1441)
Q Consensus 1070 ~~gG~~v~~G~~ 1081 (1441)
+ +|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 5899998875
No 424
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=320.27 Aligned_cols=211 Identities=20% Similarity=0.269 Sum_probs=167.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCCC-----ccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 013899999999875321 14579999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++ .||+||+.++.+..+... .++....++.+++.+||.+..+....
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------------------------------KKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 76 699999998654221100 00112335667888888543222111
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
...+.||||||||++|||+++.+|++|+|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++.++||++++
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--K-NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEecCHHHHHHhcCEEEE
Confidence 2334599999999999999999999999999999999999999999999873 3 36677788889999999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 000529 398 LSDGQIVYQGPRELVL 413 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1441)
|++|++++.|+++++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998764
No 425
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=318.49 Aligned_cols=206 Identities=18% Similarity=0.262 Sum_probs=167.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCcceEEEECCeeCCCCC-----ccceEEEEcCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGK---LDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~---l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3589999999999999999999999999999999997 3331 12899999999875421 1357999999987
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccc----c
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC----A 312 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~ 312 (1441)
+++ .||+||+.++.+..+... .++....++++++.+||.+. .
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD---------------------------------NAFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 699999998754322100 00011235678888998642 3
Q ss_pred ccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhc
Q 000529 313 DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLF 392 (1441)
Q Consensus 313 dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~ 392 (1441)
++.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++.+++
T Consensus 141 ~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~ 212 (250)
T PRK14245 141 KESAF-----ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--K-DYTIVIVTHNMQQAARVS 212 (250)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhC
Confidence 44444 499999999999999999999999999999999999999999999873 3 356777889999999999
Q ss_pred CeEEEecCCeEEEEcCHHHHH
Q 000529 393 DDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1441)
|++++|++|++++.|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999998874
No 426
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=322.39 Aligned_cols=214 Identities=20% Similarity=0.230 Sum_probs=173.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCc---eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 919 (1441)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 588899987753 246999999999999999999999999999999999975321 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.+... ...++.++|++|+..+++. |+.||+.+....+. .. ...++.+++.++.+++.. ..++.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87532 2345679999999887764 99999987643321 11 122344677788888742 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 356999999999999999999999999999999999999999999999965 799999999986 5778999999997
Q ss_pred --------cCcEEEEEcCC
Q 000529 1071 --------RGGREVYVGPL 1081 (1441)
Q Consensus 1071 --------~gG~~v~~G~~ 1081 (1441)
+.|++++.|+.
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 25899999987
No 427
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-33 Score=324.27 Aligned_cols=201 Identities=20% Similarity=0.207 Sum_probs=148.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.+.+|++.++. +.-+++.+++..+..-...+++|+||+||||+++++.|...+ ..|.+.+.+
T Consensus 362 ~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~--- 425 (582)
T KOG0062|consen 362 NLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP--- 425 (582)
T ss_pred eeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc---
Confidence 4677777755431 122689999999999999999999999999999999996542 356555433
Q ss_pred CccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHH
Q 000529 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQR 1001 (1441)
Q Consensus 923 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqr 1001 (1441)
++.++|-.|..+-+-.+.|.+- .+-...+ | ... ++.+++-+..+||..- +... +.+||||||
T Consensus 426 -----r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~-p-G~~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSGGQK 488 (582)
T KOG0062|consen 426 -----RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF-P-GKT----EEEIRRHLGSFGLSGELALQS-----IASLSGGQK 488 (582)
T ss_pred -----cceecchhHhhhhHHHHHhHHH-HHHHHhC-C-CCC----HHHHHHHHHhcCCCchhhhcc-----ccccCCcch
Confidence 4568999997655444444442 2222332 1 222 2335677889999753 2222 457999999
Q ss_pred HHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcC
Q 000529 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1441)
Q Consensus 1002 qRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~ 1080 (1441)
-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..||++||+.+ -+-..|+++.+.++|.-.-+.|.
T Consensus 489 srvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 489 SRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred hHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeecc
Confidence 9999999999999999999999999999999999999876 468999999975 36678999999986433334444
No 428
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=323.19 Aligned_cols=215 Identities=21% Similarity=0.215 Sum_probs=172.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 488999988763 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 990 (1441)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 124567999999988877 599999988654321 112222344567777777543 223333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 356999999999999999999999999999999999999999999999975 799999999986 4678899999998
Q ss_pred cCcEEEEEcCC
Q 000529 1071 RGGREVYVGPL 1081 (1441)
Q Consensus 1071 ~gG~~v~~G~~ 1081 (1441)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 429
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.1e-33 Score=359.37 Aligned_cols=209 Identities=29% Similarity=0.435 Sum_probs=169.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1441)
++++|+|+|+.++|||.++|+||||||||||++.|.|+++|+ +|+|.+||.++.+... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 456999999999999999999999999999999999999998 9999999999987755 578999999887776
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
.||+|||.++..-. . .+.+.++++. . ..++.+. .|++..||.|| +.
T Consensus 417 ~TI~~NI~~g~~~a---t-~eei~~a~k~---------------------a------~~~d~I~--~lp~g~dt~vg-e~ 462 (567)
T COG1132 417 GTIRENIALGRPDA---T-DEEIEEALKL---------------------A------NAHEFIA--NLPDGYDTIVG-ER 462 (567)
T ss_pred ccHHHHHhcCCCCC---C-HHHHHHHHHH---------------------h------ChHHHHH--hCcccccceec-CC
Confidence 89999999974310 0 0111111110 0 1122222 45778899999 45
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
+..||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. +++|+++ +.|..+.+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 66799999999999999999999999999999999999999999998654 3456666 7776655555 999999999
Q ss_pred CeEEEEcCHHHHHH
Q 000529 401 GQIVYQGPRELVLE 414 (1441)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1441)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 430
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=352.31 Aligned_cols=217 Identities=29% Similarity=0.339 Sum_probs=180.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ ++.+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 377888887653 34699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000529 923 KQE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 998 (1441)
... ..++.+||++|++.+++.+||.||+.+....+........+.++.++++++.++|.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 421 234679999999988999999999987532111111223344567889999999987666654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~ 1078 (1441)
||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||++||++. .+.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999985 788877
Q ss_pred cCC
Q 000529 1079 GPL 1081 (1441)
Q Consensus 1079 G~~ 1081 (1441)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 653
No 431
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=321.68 Aligned_cols=207 Identities=21% Similarity=0.321 Sum_probs=168.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+|||||||||||++|+|.++|.- ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 58999999999999999999999999999999999987410 1289999999987421 1235799999998889
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1441)
+.+||+||+.++....+... .++....++.+++.+||. +..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------------------------------KKDLDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 99999999988754321000 001122456778888884 34455
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+.+++.+++|+
T Consensus 145 ~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tviivsH~~~~~~~~~d~ 216 (258)
T PRK14241 145 PGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK--QD-YTIVIVTHNMQQAARVSDQ 216 (258)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhCCE
Confidence 5544 99999999999999999999999999999999999999999999874 23 5677788999999999999
Q ss_pred EEEec------CCeEEEEcCHHHHH
Q 000529 395 IILLS------DGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~------~G~iv~~G~~~~~~ 413 (1441)
|++|+ +|++++.|+++++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99996 79999999988764
No 432
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-33 Score=316.17 Aligned_cols=209 Identities=22% Similarity=0.346 Sum_probs=169.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.+. ++++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478889887652 3469999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLST 998 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 998 (1441)
.. ...++.++|++|++.+++ .|++||+.+....+.. . ..++.++++++.+++. ...++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 124567899999988877 5999999875443211 1 1234567899999996 4555553 46999
Q ss_pred HHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 999 GqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ .+ +.+|++++|++.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 899999999986 34 57999999964444444
Q ss_pred Ec
Q 000529 1078 VG 1079 (1441)
Q Consensus 1078 ~G 1079 (1441)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 433
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.67 Aligned_cols=202 Identities=21% Similarity=0.309 Sum_probs=164.2
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcceEEEECCeeCCCC--C---ccceEEEEcCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHD 235 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d 235 (1441)
.+|+|+|++|++||+++|+|||||||||||++|+|.++ |+ +|+|.++|+++... . .++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 58999999999999999999999999999999999987 34 89999999987421 1 135699999998
Q ss_pred CCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cc
Q 000529 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----IC 311 (1441)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 311 (1441)
.+++ .||+||+.+++...+.. . +....++.+++.+++. +.
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~-~----------------------------------~~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYT-G----------------------------------DMDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCc-H----------------------------------HHHHHHHHHHHHhCCcchhhhh
Confidence 8777 59999999876433210 0 0011234566777663 33
Q ss_pred cccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhh
Q 000529 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1441)
Q Consensus 312 ~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l 391 (1441)
.++.+. .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. . +.+|++++|+.+++.++
T Consensus 148 ~~~~~~-----~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~ 219 (269)
T PRK14259 148 LNESGY-----SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--K-NFTIVIVTHNMQQAVRV 219 (269)
T ss_pred hCCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHh
Confidence 455544 499999999999999999999999999999999999999999999863 2 35677789999999999
Q ss_pred cCeEEEecC-----------CeEEEEcCHHHHHH
Q 000529 392 FDDIILLSD-----------GQIVYQGPRELVLE 414 (1441)
Q Consensus 392 ~D~vilL~~-----------G~iv~~G~~~~~~~ 414 (1441)
||++++|++ |++++.|+++++.+
T Consensus 220 ~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 220 SDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred cCEEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 999999996 67899999988753
No 434
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=351.29 Aligned_cols=207 Identities=23% Similarity=0.315 Sum_probs=174.1
Q ss_pred ceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCcc----ccceEEEEeccCCCCCCC
Q 000529 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQNDIHSPF 943 (1441)
Q Consensus 868 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~ 943 (1441)
++.+|+||||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999998653 479999999876421 234569999999988889
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000529 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1441)
Q Consensus 944 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPT 1023 (1441)
+||+||+.+..........+.++..+.++++++.+++.+..++.++ .|||||||||+||+||+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVA-----TLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 9999999875321111111233344568899999999877777644 69999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1024 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1024 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
+|||+.++..+++.|+++++.|+|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999878999999999986 57788999999985 89999998754
No 435
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.11 Aligned_cols=213 Identities=28% Similarity=0.383 Sum_probs=172.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCcceEEEECCeeCCCCCc---cceEEEEcCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS-----LKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1441)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999999874 1137999999998764332 346899999977
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1441)
.++.+||+||+.++...... ... .. ..+....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~~---~~-------------------------~~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RAG---AL-------------------------THRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--ccc---cC-------------------------CHHHHHHHHHHHHHcCcHhhhcCCc
Confidence 66779999999885321000 000 00 0011234567899999988777777
Q ss_pred ccccccCCChhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhh
Q 000529 317 GDEMRRGVSGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPE 387 (1441)
Q Consensus 317 g~~~~rGLSGGqrkRvsia~al~---------~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~ 387 (1441)
++ |||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+.++
T Consensus 144 ~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tviiisH~~~~ 217 (272)
T PRK13547 144 TT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLAR-DWNLGVLAIVHDPNL 217 (272)
T ss_pred cc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHH
Confidence 65 9999999999999999 59999999999999999999999999998754 335667778899999
Q ss_pred HHhhcCeEEEecCCeEEEEcCHHHHH
Q 000529 388 TYNLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 388 ~~~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999988763
No 436
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-33 Score=312.08 Aligned_cols=192 Identities=28% Similarity=0.421 Sum_probs=163.4
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000529 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 170 ~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1441)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 999999998875311 1357999999998888999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|+||+.+...... .. .....++.+++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~~------------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRKR------------NR------------------------EDRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhCC------------HH------------------------HHHHHHHHHHHHcCCHhHhhcCccc----
Confidence 9999987642110 00 0112356789999998877777765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++. ..+++|++++|+.+++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKK-NLNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998764 335667778899999999999999999999
Q ss_pred EEEEc
Q 000529 403 IVYQG 407 (1441)
Q Consensus 403 iv~~G 407 (1441)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 437
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-33 Score=320.45 Aligned_cols=207 Identities=23% Similarity=0.345 Sum_probs=171.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCee-----CCCCCc-------cceEEEEc
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHN-----MDEFVP-------ERTAAYIS 232 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 232 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35899999999999999999999999999999999999998 9999999987 654322 23699999
Q ss_pred CCCC--CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc
Q 000529 233 QHDN--HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI 310 (1441)
Q Consensus 233 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1441)
|++. +++.+|+.||+.+.....+.. . ..+....++++++.+|+..
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~-~--------------------------------~~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR-H--------------------------------YGDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC-c--------------------------------HHHHHHHHHHHHHHcCCCh
Confidence 9863 577889999997643211100 0 0011223567889999974
Q ss_pred -ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHH
Q 000529 311 -CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1441)
Q Consensus 311 -~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1441)
..++.+++ |||||||||+|||||+.+|++|+|||||+|||..+...+.+.|+++.. ..+.+|+.++|+.+++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHH
Confidence 56776665 999999999999999999999999999999999999999999998754 33567778999999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHH
Q 000529 390 NLFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 390 ~l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988764
No 438
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=317.28 Aligned_cols=206 Identities=22% Similarity=0.344 Sum_probs=165.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998763 112389999999987531 1245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+ +||+||+.++....+.... .+....++.+++.+++.+ ..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999987543321000 001123455677777642 3345
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++.+++|+
T Consensus 143 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~ 214 (250)
T PRK14240 143 SAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--K-DYTIVIVTHNMQQASRISDK 214 (250)
T ss_pred CCC-----CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEEeCHHHHHhhCCE
Confidence 544 499999999999999999999999999999999999999999999873 2 35677788889999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
+++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 439
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-34 Score=335.00 Aligned_cols=202 Identities=27% Similarity=0.387 Sum_probs=167.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1441)
+.++|+|+|+++++||-+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.+++++|.. |+..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~-hlF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRV-HLFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccch-HHHH
Confidence 347999999999999999999999999999999999999999 9999999999877765 46899999964 6667
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC-------ccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL-------DICAD 313 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~d 313 (1441)
.|+|+||.++...- .. +.+-++++..|| ++..|
T Consensus 426 ~Tlr~NL~lA~~~A-------------------------sD---------------Eel~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANPDA-------------------------SD---------------EELWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCCCC-------------------------CH---------------HHHHHHHHHcCHHHHHHhChhhhh
Confidence 89999999864211 00 111223444444 34667
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
|.+|+ .+++||||||||++|||+|..++++++|||||.|||+.|..++++.+.+. .+ +.+++.++|+...+ +.||
T Consensus 466 t~lge-~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~--~~-~kTll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGE-GGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEH--AE-GKTLLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhcc-CCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHH--hc-CCeEEEEecccccH-hhcC
Confidence 88985 67889999999999999999999999999999999999999999999763 33 45556677777665 6799
Q ss_pred eEEEecCCeEEEEcCHHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~~ 414 (1441)
+|++|++|+++++|.++++.+
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999864
No 440
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=317.10 Aligned_cols=207 Identities=20% Similarity=0.333 Sum_probs=167.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 11389999999987532 124579999999887
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----ccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 313 (1441)
++ +||+||+.++....+... .++....+++.++.+|+.. ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS---------------------------------KHKLDRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHHHHHcCCCchhHHHHh
Confidence 77 899999998654321100 0001123456778888753 244
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
..+ +.||||||||++||+|++.+|++++|||||+|||..++..+.+.|+++. . +.+++.++|+.+++.+++|
T Consensus 142 ~~~-----~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tili~sH~~~~~~~~~d 213 (250)
T PRK14262 142 KPG-----TRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS--E-NYTIVIVTHNIGQAIRIAD 213 (250)
T ss_pred CCh-----hhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh--c-CcEEEEEeCCHHHHHHhCC
Confidence 444 4599999999999999999999999999999999999999999999864 2 3577778888889999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
++++|++|+++..|+.+++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999988774
No 441
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=9.2e-34 Score=367.67 Aligned_cols=205 Identities=27% Similarity=0.387 Sum_probs=164.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|++++|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++.+..+ ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 46899999999999999999999999999999999999998 9999999999987654 47899999988766 56
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
|++|||.++.. . + .+...++++ ..+ .++.++ .|++..||.+|+ .+
T Consensus 542 TI~eNi~~~~~-~---~-~e~i~~al~---~a~------------------------l~~~i~--~lp~G~dt~ige-~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---T-LDEAWEAAR---MAG------------------------LAEDIR--AMPMGMHTVISE-GG 586 (686)
T ss_pred cHHHHHhcCCC-C---C-HHHHHHHHH---HcC------------------------cHHHHH--hccccccccccC-CC
Confidence 99999998632 1 0 011111100 000 011111 356678999996 45
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
..||||||||++||||++++|++|+||||||+||+.+..++.+.|++. ++ ++++++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecCh-HHHHcCCEEEEEECC
Confidence 779999999999999999999999999999999999999999999863 34 455566655 456779999999999
Q ss_pred eEEEEcCHHHHHH
Q 000529 402 QIVYQGPRELVLE 414 (1441)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1441)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 442
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.9e-33 Score=318.51 Aligned_cols=214 Identities=27% Similarity=0.285 Sum_probs=171.8
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc--
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP-- 921 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-- 921 (1441)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEeccccc
Confidence 67888887653 23589999999999999999999999999999999998653 47999999876
Q ss_pred ---CCcc-------ccceEEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccc
Q 000529 922 ---KKQE-------TFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLV 988 (1441)
Q Consensus 922 ---~~~~-------~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~v 988 (1441)
.... ..++.++|++|++. ..+.+|+.|++.+..... .. .......+.++++++.+++.+ ..++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~ 146 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDLP 146 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcCc
Confidence 3221 12346899999874 345678999986543211 11 111233456788999999963 555553
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEE
Q 000529 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1067 (1441)
Q Consensus 989 g~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vl 1067 (1441)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|+++
T Consensus 147 -----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 147 -----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 469999999999999999999999999999999999999999999998764 899999999986 5677899999
Q ss_pred EEecCcEEEEEcCC
Q 000529 1068 LMKRGGREVYVGPL 1081 (1441)
Q Consensus 1068 lL~~gG~~v~~G~~ 1081 (1441)
+|++ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 899999875
No 443
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.4e-33 Score=318.56 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=168.2
Q ss_pred eeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---cccceEEEEeccCCCCCCCCCHH
Q 000529 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 947 (1441)
Q Consensus 871 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 947 (1441)
+|+||||++++||+++|+||||||||||+++|+|... .+|+|.++|.+... ...++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987643 12345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh-------CCCeeEEe
Q 000529 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVA-------NPSIIFMD 1020 (1441)
Q Consensus 948 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~-------~p~iLlLD 1020 (1441)
||+.+.... ....+...+.++++++.++|.+..++.+ ..||||||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333456789999999987777664 4699999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1021 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999986 47789999999985 8999998763
No 444
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.6e-32 Score=354.66 Aligned_cols=211 Identities=28% Similarity=0.446 Sum_probs=177.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+|++|+++. +++++|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEh
Confidence 6899999998842 234699999999999999999999999999999999998763 479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
++ ..+++.++||+|++.+++ .|++||+.++. .+.+ ++.++++++..++.+. .|+.+|+.|
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G 599 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGERG 599 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecCCC
Confidence 54 456788999999998886 59999997641 1222 2345667777776543 356666544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++|||||+++|+||+||||||+||+++++.+++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 600 -~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~- 674 (694)
T TIGR03375 600 -RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN- 674 (694)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999886 4799999999985 4678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 899999985
No 445
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9e-34 Score=326.84 Aligned_cols=212 Identities=30% Similarity=0.471 Sum_probs=172.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCcc---ceEEEEcCCCCCCCC
Q 000529 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGE 240 (1441)
Q Consensus 164 ~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1441)
++++|+|+||.+.|||.++|+||||||||||.++|.|..+|. +|.|.+||.+++.++++ +.+||.||+-.+| .
T Consensus 348 ~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF-~ 423 (580)
T COG4618 348 KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELF-D 423 (580)
T ss_pred CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceec-C
Confidence 468999999999999999999999999999999999999998 99999999999887764 7899999975554 5
Q ss_pred CCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccc
Q 000529 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1441)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1441)
.||.|||+ |+.. +.|.+...+++...+ ++++ ++.|+..+||.||+ .
T Consensus 424 GTIaeNIa---Rf~~----------------------~~d~~kIieAA~lAg------vHel--Il~lP~GYdT~iG~-~ 469 (580)
T COG4618 424 GTIAENIA---RFGE----------------------EADPEKVIEAARLAG------VHEL--ILRLPQGYDTRIGE-G 469 (580)
T ss_pred CcHHHHHH---hccc----------------------cCCHHHHHHHHHHcC------hHHH--HHhCcCCccCccCC-C
Confidence 79999995 2221 112222222221111 1221 36799999999996 4
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~ 400 (1441)
+.+||||||||+++|||++++|.+++||||.|.||+.-...+.+.|.+. +..++++|+ ++| .+.+...+|+|++|++
T Consensus 470 G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~-k~rG~~vvv-iaH-RPs~L~~~Dkilvl~~ 546 (580)
T COG4618 470 GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAA-KARGGTVVV-IAH-RPSALASVDKILVLQD 546 (580)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHH-HHcCCEEEE-Eec-CHHHHhhcceeeeecC
Confidence 6779999999999999999999999999999999999999999999875 334555554 544 4678899999999999
Q ss_pred CeEEEEcCHHHHHHHH
Q 000529 401 GQIVYQGPRELVLEFF 416 (1441)
Q Consensus 401 G~iv~~G~~~~~~~~f 416 (1441)
|++-.+|+++|++...
T Consensus 547 G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 547 GRIAAFGPREEVLAKV 562 (580)
T ss_pred ChHHhcCCHHHHHHHh
Confidence 9999999999998753
No 446
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=320.22 Aligned_cols=214 Identities=20% Similarity=0.242 Sum_probs=172.8
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--c-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 919 (1441)
.+.++|++++++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478889887763 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 990 (1441)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 87531 234567999999988877 599999987654321 11 123345667788888743 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 991 ~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 346999999999999999999999999999999999999999999999975 589999999986 5888999999997
Q ss_pred c--------CcEEEEEcCC
Q 000529 1071 R--------GGREVYVGPL 1081 (1441)
Q Consensus 1071 ~--------gG~~v~~G~~ 1081 (1441)
+ .|++++.|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4899999875
No 447
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-33 Score=323.50 Aligned_cols=211 Identities=20% Similarity=0.291 Sum_probs=173.0
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.+.++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678999887642 22358999999999999999999999999999999999864 369999999876
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGL------PGV 993 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 993 (1441)
.. ...++.++|++|++.+++ .|++||+.... ... ++.++++++.+||.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999999887 49999995321 111 23467788899998766654331 123
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999985 34 46999999975 8
Q ss_pred EEEEEcCCC
Q 000529 1074 REVYVGPLG 1082 (1441)
Q Consensus 1074 ~~v~~G~~~ 1082 (1441)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 999999873
No 448
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.7e-33 Score=307.31 Aligned_cols=179 Identities=26% Similarity=0.331 Sum_probs=150.5
Q ss_pred ceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc-----cccceEEEEeccCCC-CC
Q 000529 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-----ETFARISGYCEQNDI-HS 941 (1441)
Q Consensus 868 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 941 (1441)
++.+|+|||++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 34699999999999999999999999999999999998653 47999999987531 123567999999973 23
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeC
Q 000529 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1441)
Q Consensus 942 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDE 1021 (1441)
...|++||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3479999998865432 1233444556889999999988777764 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Q 000529 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1056 (1441)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~ 1056 (1441)
||+|||+.++..+.+.|++++++|+|||++||++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 449
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=6.2e-32 Score=348.25 Aligned_cols=104 Identities=25% Similarity=0.328 Sum_probs=90.1
Q ss_pred HHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhh---CCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Q 000529 971 IEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVA---NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 1046 (1441)
Q Consensus 971 v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRv~iA~aL~~---~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~ 1046 (1441)
..++++.+||... .++. ...|||||+||+.||++|+. +|++++|||||+|||+.....+++.|+++.++|.
T Consensus 808 ~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~ 882 (924)
T TIGR00630 808 KLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGN 882 (924)
T ss_pred HHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 3567888898753 3444 34699999999999999997 5999999999999999999999999999988899
Q ss_pred EEEEEecCCcHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 000529 1047 TVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPL 1081 (1441)
Q Consensus 1047 tvi~~~H~~~~~i~~~~D~vllL~-----~gG~~v~~G~~ 1081 (1441)
|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 883 TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 883 TVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 9999999985 346799999994 57999999986
No 450
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=316.80 Aligned_cols=216 Identities=23% Similarity=0.296 Sum_probs=174.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--ce--EEEEEEEc
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGDIRIS 918 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~--~~G~i~i~ 918 (1441)
.+.++++++++ +++.+|+||||++.+||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYI-------------NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEec-------------CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 37788888765 245699999999999999999999999999999999997542 21 23666666
Q ss_pred CccCCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000529 919 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGLP 991 (1441)
Q Consensus 919 g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 991 (1441)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665432 2345679999999999999999999988753321 1123344456889999999964 23333
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999864 699999999986 46688999999984
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 899999875
No 451
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=300.99 Aligned_cols=168 Identities=28% Similarity=0.427 Sum_probs=147.5
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
.++|+++.++ ...+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 4677776542 23699999999999999999999999999999999998653 47999999987643
Q ss_pred --cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000529 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1441)
Q Consensus 925 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1002 (1441)
...++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999872 8999999
Q ss_pred HHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 1003 Rv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
|++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ .+.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999986 567789999999863
No 452
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=295.64 Aligned_cols=207 Identities=25% Similarity=0.380 Sum_probs=179.3
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---cccceEEEEeccCCCCCCC
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPF 943 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 943 (1441)
+.+.+|+|+|..|++|.+++|+|||||||||||.++++..+ ..+|+|.++|.++.. ...++.++..-|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 56789999999999999999999999999999999998765 358999999998754 3466778888998888888
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCC
Q 000529 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1441)
Q Consensus 944 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPT 1023 (1441)
+||+|-+.|+..-. ......++.+..++++++.++|.++.|+... +||||||||.-||+.|+.+.+.++||||.
T Consensus 90 lTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryLd-----~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYLD-----ELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhHH-----hcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999973211 1223345566789999999999999998854 69999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCCC
Q 000529 1024 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1441)
Q Consensus 1024 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~~ 1083 (1441)
++||...+..+|+.||+++++ |+|||++.||.+. ...+.|+++-|++ |+++..|++.+
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 999999999999999999976 9999999999874 4557899999985 89999999854
No 453
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=317.09 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=174.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCC--C-ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887652 3469999999999999999999999999999999999643 1 12579999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 994 (1441)
.++.. ...++.++|++|++.+++. |+.||+.+...... ....+..++++.++++.+++.+........ ...
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87642 1235679999999888874 99999987643221 112233456688899999885422111111 245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999964 899999999986 57888999999975 89
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999875
No 454
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.1e-33 Score=317.37 Aligned_cols=203 Identities=23% Similarity=0.278 Sum_probs=168.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcceEEEECCeeCCCCCc-cceEEEEcCCCC--CC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP----SLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~ 238 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++||+|++. +.
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~ 93 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFN 93 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccC
Confidence 589999999999999999999999999999999999988 5 9999999998754322 257999999974 44
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc---ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI---CADTM 315 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~ 315 (1441)
+..|+.+++.+.++..+.. . ....++.+++.+||.+ ..++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (254)
T PRK10418 94 PLHTMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAARVLKLY 137 (254)
T ss_pred ccccHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChhhhhhcC
Confidence 5679999987654322110 0 0123567889999976 34666
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++ ..+++|++++|+.+++.+++|++
T Consensus 138 ~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~-~~g~til~~sH~~~~~~~~~d~v 211 (254)
T PRK10418 138 PFE-----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQ-KRALGMLLVTHDMGVVARLADDV 211 (254)
T ss_pred Ccc-----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHH-hcCcEEEEEecCHHHHHHhCCEE
Confidence 554 999999999999999999999999999999999999999999998754 33567777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 212 AVMSHGRIVEQGDVETLF 229 (254)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999988764
No 455
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-33 Score=317.75 Aligned_cols=204 Identities=20% Similarity=0.273 Sum_probs=164.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcceEEEECCeeCCCCC-----ccceEEEEcCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEFV-----PERTAAYISQH 234 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1441)
.++|+|+|+++++||+++|+|||||||||||++|+|.++ |+ +|+|.++|+++.... .++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 358999999999999999999999999999999999864 45 899999999875321 23579999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----c
Q 000529 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----I 310 (1441)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~ 310 (1441)
+.+++. ||+||+.++....+... ....+..++..++.+++. +
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR---------------------------------KSVLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc---------------------------------HHHHHHHHHHHHHHcCCCcchHH
Confidence 887774 99999998643221000 000112244567777774 2
Q ss_pred ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHh
Q 000529 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1441)
Q Consensus 311 ~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1441)
..++.+++ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + ++|+.++|+.+++.+
T Consensus 157 ~~~~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~ 228 (268)
T PRK14248 157 RLHSSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALR 228 (268)
T ss_pred HHhcCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHH
Confidence 34455544 999999999999999999999999999999999999999999998742 3 567778888999999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 000529 391 LFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 391 l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
++|+|++|++|++++.|+.+++.
T Consensus 229 ~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 229 VSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 456
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.4e-33 Score=315.33 Aligned_cols=209 Identities=27% Similarity=0.395 Sum_probs=166.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|+++.+.. .++.+|+|+|+++++|++++|+||||||||||+++|+|...+ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 567787765421 124699999999999999999999999999999999998653 4799999998753
Q ss_pred c---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000529 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVG------LPGVN 994 (1441)
Q Consensus 924 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 994 (1441)
. ...++.++|++|++.+++ .|+.|++.+... ... ++.+.++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223457999999988776 699999876421 111 2235678888888776665431 01235
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 89999999986 3 478999999985 78
Q ss_pred EEEEc
Q 000529 1075 EVYVG 1079 (1441)
Q Consensus 1075 ~v~~G 1079 (1441)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 87654
No 457
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-33 Score=316.04 Aligned_cols=194 Identities=19% Similarity=0.274 Sum_probs=164.6
Q ss_pred CceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCccccceEEEEeccCCCCCCCCCH
Q 000529 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTV 946 (1441)
Q Consensus 867 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 946 (1441)
..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ ..|+|.++|. ++++.|+....+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 456799999999999999999999999999999999998653 4799999884 3566777767778999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCC
Q 000529 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1441)
Q Consensus 947 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgL 1026 (1441)
.||+.+..... ....+...+.++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998764432 1233444556778899999988777654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1027 D~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|+.+...+++.|+++.+.|+|||+++|++. .+.+.+|++++|++ |++++.|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999877999999999976 46778999999984 8999998863
No 458
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.5e-33 Score=309.97 Aligned_cols=197 Identities=28% Similarity=0.374 Sum_probs=163.7
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
++++|++..++ ++.+|+|+|++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56788876652 3469999999999999999999999999999999999865 34799999998753
Q ss_pred ccccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000529 924 QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1441)
Q Consensus 924 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1003 (1441)
....++.++|++|++.+++..|+.||+.+....+. .. ++.++++++.+||.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22245678999999888888999999987553321 11 234788999999987666654 3699999999
Q ss_pred HHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEe
Q 000529 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1441)
Q Consensus 1004 v~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~ 1070 (1441)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||++||++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998878999999999985 343 3 8887774
No 459
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.7e-33 Score=357.82 Aligned_cols=199 Identities=23% Similarity=0.286 Sum_probs=164.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1441)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+ .|
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~-~T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLA-DT 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCcccc-ch
Confidence 5999999999999999999999999999999999999998 9999999999987654 478999999987776 59
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcC-------Cccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG-------LDICADTM 315 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-------L~~~~dt~ 315 (1441)
++|||.++.. . ..+. ++.+++..| |++..||.
T Consensus 431 i~~NI~~~~~---~--~d~~------------------------------------i~~a~~~~gl~~~i~~lp~Gldt~ 469 (592)
T PRK10790 431 FLANVTLGRD---I--SEEQ------------------------------------VWQALETVQLAELARSLPDGLYTP 469 (592)
T ss_pred HHHHHHhCCC---C--CHHH------------------------------------HHHHHHHcCcHHHHHhcccccccc
Confidence 9999998631 1 0000 112222222 56677899
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+|+ .+..||||||||++|||||+++|++++||||||+||+.+...|.+.|++.. .++|+|+ ++|.. +....+|+|
T Consensus 470 i~e-~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIi-vtHr~-~~l~~~D~i 544 (592)
T PRK10790 470 LGE-QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVV-IAHRL-STIVEADTI 544 (592)
T ss_pred ccC-CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCEE
Confidence 987 456699999999999999999999999999999999999999999998753 3445554 55554 556679999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1441)
++|++|+++..|+++++.+
T Consensus 545 i~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 545 LVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEECCEEEEEcCHHHHHh
Confidence 9999999999999999864
No 460
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=315.67 Aligned_cols=207 Identities=21% Similarity=0.325 Sum_probs=166.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 358999999999999999999999999999999999986 2111389999999987431 124569999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1441)
++ .||+||+.++....+.... +.....++.+++.+||. ...+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK---------------------------------ELIDQRVEESLKQAAIWKETKDNLD 142 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchHHHhc
Confidence 75 7999999886543221000 00112345677888884 2334
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
..+ +.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +++|+.++|+.+++.+++|
T Consensus 143 ~~~-----~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d 214 (251)
T PRK14251 143 RNA-----QAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--H-QYTFIMVTHNLQQAGRISD 214 (251)
T ss_pred cCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--c-CCeEEEEECCHHHHHhhcC
Confidence 444 4499999999999999999999999999999999999999999999863 2 3677778999999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++|+++..|+.+++.
T Consensus 215 ~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 215 QTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 461
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.4e-32 Score=356.72 Aligned_cols=212 Identities=26% Similarity=0.402 Sum_probs=175.9
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++++|++|+++. +++.+|+|+|++++|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 36899999998742 234699999999999999999999999999999999998663 47999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 991 (1441)
.++ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 754 356778999999988876 69999997631 1 222 2335566666666543 35666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +|+|+|++||+++ ..+.+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999985 5899999999986 4567999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 462
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.1e-34 Score=361.16 Aligned_cols=211 Identities=30% Similarity=0.454 Sum_probs=176.7
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++|+|++|.++. ++++|+|+|++++|||.+||+||||||||||++.|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 45999999998752 35799999999999999999999999999999999998763 58999999988
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCC-------cccccccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVEL-------KPLRQSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~vg~~ 991 (1441)
++. ..+++.++||+|++.++. -|++||+.++. .+.+.++ ++++++..++ .+-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecCC
Confidence 754 456888999999999987 89999998763 1233333 4444444433 33468888854
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
...||||||||++|||||+++|+||+||||||+||+++...|++.++++. +|+|+++++|+++ ....+|+|++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 34699999999999999999999999999999999999999999999887 5789999999986 3455999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|++++.|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 899999986
No 463
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-34 Score=286.10 Aligned_cols=206 Identities=23% Similarity=0.331 Sum_probs=174.4
Q ss_pred CCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc----------------cccce
Q 000529 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----------------ETFAR 929 (1441)
Q Consensus 866 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~ 929 (1441)
++...+|++||++.+.|+++.|+|.|||||||+|+||.=..++ ..|.|.+||..+.- ...+.
T Consensus 16 ~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P--~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs 93 (256)
T COG4598 16 YGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRT 93 (256)
T ss_pred cccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCC--CCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHH
Confidence 4567899999999999999999999999999999999977663 47999999975310 11234
Q ss_pred EEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHH
Q 000529 930 ISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVE 1009 (1441)
Q Consensus 930 ~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~a 1009 (1441)
..|+|+|+..+++.+||.||+.=+- .+. ...++.+..++.+..|+.+|+.+.+|.+. ..|||||+||++||||
T Consensus 94 ~L~mVFQ~FNLWsHmtvLeNViEaP-vhV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARa 166 (256)
T COG4598 94 RLGMVFQHFNLWSHMTVLENVIEAP-VHV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARA 166 (256)
T ss_pred HhhHhhhhcchhHHHHHHHHHHhcc-hHh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHH
Confidence 5799999999999999999985321 111 13456666777889999999999888764 3599999999999999
Q ss_pred HhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCCC
Q 000529 1010 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1441)
Q Consensus 1010 L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~~ 1082 (1441)
|+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.+.. .-+...+++.|.+ |.+-..||+.
T Consensus 167 LameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 167 LAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred HhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 999999999999999999999999999999999999999999999864 5567799999985 8999999983
No 464
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.1e-33 Score=315.50 Aligned_cols=219 Identities=26% Similarity=0.294 Sum_probs=169.9
Q ss_pred eeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCC
Q 000529 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1441)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 923 (1441)
+.++|+++.++ ++.+|+|+|++|++|++++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 46778877653 24699999999999999999999999999999999997421135799999998764
Q ss_pred cc---c-cceEEEEeccCCCCCCCCCHHHHHHHHHH-hcC--CC-CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000529 924 QE---T-FARISGYCEQNDIHSPFVTVYESLFYSAW-LRL--PP-EVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1441)
Q Consensus 924 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~-lr~--~~-~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 994 (1441)
.. . .++.++|++|++.+++.+|+.+++.+... ++. .. ........+.+++.++.+++. +..+..+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 31 1 22468999999888887887776543211 110 00 011222345678889999985 34444431 2
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHh-hCeEEEEecCc
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1073 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~-~D~vllL~~gG 1073 (1441)
.||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++++.|+|||++||++. .+... +|++++|+ +|
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~-~g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLY-QG 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEE-CC
Confidence 59999999999999999999999999999999999999999999999877899999999976 34444 79999997 48
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 99999875
No 465
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=316.85 Aligned_cols=215 Identities=21% Similarity=0.239 Sum_probs=174.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC--c-eEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 919 (1441)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 588999987763 24699999999999999999999999999999999997642 1 2589999998
Q ss_pred ccCC---c----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 000529 920 YPKK---Q----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLV 988 (1441)
Q Consensus 920 ~~~~---~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 988 (1441)
.+.. . ...++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+ ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGDL- 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhCC-
Confidence 7642 1 1245679999999988885 999999876533211 111223455778888888742 23333
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEE
Q 000529 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1068 (1441)
Q Consensus 989 g~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vll 1068 (1441)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++
T Consensus 159 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~ 232 (265)
T PRK14252 159 ----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAY 232 (265)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEE
Confidence 346999999999999999999999999999999999999999999999975 699999999986 57788999999
Q ss_pred EecCcEEEEEcCC
Q 000529 1069 MKRGGREVYVGPL 1081 (1441)
Q Consensus 1069 L~~gG~~v~~G~~ 1081 (1441)
|++ |+++..|+.
T Consensus 233 l~~-G~i~~~g~~ 244 (265)
T PRK14252 233 MYM-GELIEFGAT 244 (265)
T ss_pred EEC-CEEEEeCCH
Confidence 974 899999875
No 466
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.8e-32 Score=353.54 Aligned_cols=210 Identities=27% Similarity=0.415 Sum_probs=173.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++|+||+|+++.. +++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 58999999988531 134699999999999999999999999999999999998763 479999999987
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
++ ..+++.++||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..+
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 54 346778999999998876 69999998752 1 222 2346677888777654 355666543
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+||||||||++|||||+++|+||+||||||+||+++++.+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 616 -~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 616 -SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 5699999999999999999999999999999999999999998 22 235899999999985 5678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 899999985
No 467
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-33 Score=358.40 Aligned_cols=210 Identities=23% Similarity=0.368 Sum_probs=177.7
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++++|++|.++. ++++|+|+|++++|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 36899999998741 23599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 991 (1441)
.++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 3567889999999999875 9999998752 122 23467788888876533 5556653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEec
Q 000529 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1441)
Q Consensus 992 ~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~ 1071 (1441)
+ ..||||||||++|||||+++|+||+||||||+||+++++.|.+.|+++.+ ++|+|+++|+++ ....+|++++|++
T Consensus 474 g-~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 G-NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 3 46999999999999999999999999999999999999999999999864 699999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000529 1072 GGREVYVGPL 1081 (1441)
Q Consensus 1072 gG~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 468
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=297.54 Aligned_cols=209 Identities=23% Similarity=0.355 Sum_probs=188.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCccceEEEEcCCCCCCCCCC
Q 000529 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMT 242 (1441)
Q Consensus 163 ~~~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1441)
.++++++|+|+.++||+|++++|||||||||.+++|.|+++|+ +|+|+++|.+++... +.+|||.|.+--+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 5678999999999999999999999999999999999999998 999999999987532 457999999999999999
Q ss_pred HHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccccccc
Q 000529 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1441)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1441)
|.|.|.|-++++|+.. ++.....+++|+++++.......|-+
T Consensus 89 v~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~kIk~---- 130 (300)
T COG4152 89 VEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTKKIKE---- 130 (300)
T ss_pred HHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccchHHH----
Confidence 9999999999998631 23345578899999999888887766
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000529 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1441)
Q Consensus 323 GLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G~ 402 (1441)
||-|.+|++.+-.+++..|++++||||+|||||.++..+-+.+.++. ..+++|+..+|.++.+.++||++++|++|+
T Consensus 131 -LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk--~~GatIifSsH~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 131 -LSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELK--EEGATIIFSSHRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred -hhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHH--hcCCEEEEecchHHHHHHHhhhhheecCCc
Confidence 99999999999999999999999999999999999999989888874 457778888999999999999999999999
Q ss_pred EEEEcCHHHHHHHH
Q 000529 403 IVYQGPRELVLEFF 416 (1441)
Q Consensus 403 iv~~G~~~~~~~~f 416 (1441)
.|.+|+.+++...|
T Consensus 208 ~V~~G~v~~ir~~~ 221 (300)
T COG4152 208 TVLYGTVEDIRRSF 221 (300)
T ss_pred eEEeccHHHHHHhc
Confidence 99999999998754
No 469
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5e-33 Score=316.06 Aligned_cols=201 Identities=27% Similarity=0.385 Sum_probs=169.7
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCCCH
Q 000529 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTV 243 (1441)
Q Consensus 167 iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 243 (1441)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999974 3 8999999998765432 2468999999888888999
Q ss_pred HHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccccC
Q 000529 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1441)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rG 323 (1441)
+||+.+..... . . ..+....++++++.+||.+..++.+++
T Consensus 87 ~~nl~~~~~~~-~-~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-R---------------------------------TEAVASALNEVAEALGLDDKLGRSVNQ----- 126 (248)
T ss_pred HHHHHhcCccC-C-C---------------------------------cHHHHHHHHHHHHHcCCHhHhcCCccc-----
Confidence 99998753210 0 0 000123456789999998888877765
Q ss_pred CChhhhhHHHHHHHHhc-------CCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEE
Q 000529 324 VSGGQKKRVTTGEMMVG-------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1441)
Q Consensus 324 LSGGqrkRvsia~al~~-------~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vi 396 (1441)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--~~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ--QGIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999998753 35677778999999999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 000529 397 LLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987663
No 470
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=324.18 Aligned_cols=204 Identities=20% Similarity=0.339 Sum_probs=165.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--C---CCCcceEEEECCeeCCCC-----CccceEEEEcCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--P---SLKVSGRVTYNGHNMDEF-----VPERTAAYISQH 234 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~---~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 234 (1441)
..+|+|+|++|++||+++|+|||||||||||++|+|..+ | + +|+|.++|.++... ..++.++|++|+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~ 128 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQK 128 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCC
Confidence 359999999999999999999999999999999999854 3 5 99999999987532 124579999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----c
Q 000529 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----I 310 (1441)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~ 310 (1441)
+.+++ .||+||+.++....+... .......+..+++.+|+. +
T Consensus 129 ~~l~~-~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~ 174 (286)
T PRK14275 129 PNPFP-KSIFDNIAYGPRLHGIND---------------------------------KKQLEEIVEKSLRKAALWDEVSD 174 (286)
T ss_pred CCCCc-cCHHHHHHhHHHhcCCCc---------------------------------HHHHHHHHHHHHHHhCCccchhh
Confidence 88777 499999998654321100 000112345567777763 3
Q ss_pred ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHh
Q 000529 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1441)
Q Consensus 311 ~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1441)
..++.++ .|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. +.+|++++|+.+++.+
T Consensus 175 ~~~~~~~-----~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~ 246 (286)
T PRK14275 175 RLDKNAL-----GLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASR 246 (286)
T ss_pred HhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHH
Confidence 4455554 4999999999999999999999999999999999999999999998642 3667778999999999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 000529 391 LFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 391 l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
++|++++|++|+++..|+.+++.
T Consensus 247 ~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 247 VSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 471
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.8e-33 Score=306.44 Aligned_cols=184 Identities=25% Similarity=0.324 Sum_probs=154.5
Q ss_pred ceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc--cccceEEEEeccCCCCCCCCC
Q 000529 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 868 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 35699999999999999999999999999999999997653 47999999987532 224467899999988888899
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCC
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsg 1025 (1441)
+.|++.+....+. . + ++.++++++.+++.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPAA-----QLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987644321 1 1 2357889999999887776643 6999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEE
Q 000529 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1068 (1441)
Q Consensus 1026 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vll 1068 (1441)
||+.++..+++.|++++++|.|||+++|++.. + .+++++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 99999999999999998789999999999752 2 3466553
No 472
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=319.17 Aligned_cols=209 Identities=26% Similarity=0.332 Sum_probs=163.4
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++. .++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 46677765531 113589999999999999999999999999999999998653 47999999986532
Q ss_pred ---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000529 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRK-----MFIEEVMELV--ELKPLRQSLVGLPGVN 994 (1441)
Q Consensus 925 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 994 (1441)
...++.++|++|++.+++ .|++||+.+.... ....... ..+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999988776 6999999765321 1111111 1234445554 455444443 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcE
Q 000529 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1441)
Q Consensus 995 ~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~ 1074 (1441)
.||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||++. ++ +.+|++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 6999999999999999999999999999999999999999999999964 899999999986 35 45999999985 78
Q ss_pred EEEEcCC
Q 000529 1075 EVYVGPL 1081 (1441)
Q Consensus 1075 ~v~~G~~ 1081 (1441)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 9888875
No 473
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-33 Score=316.16 Aligned_cols=206 Identities=21% Similarity=0.269 Sum_probs=166.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCC--C---ccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+|+||||||||+++|+|.++++. ..+|+|.++|+++... . .++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 58999999999999999999999999999999999987531 1389999999987531 1 135799999998878
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----ccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1441)
+ +||+||+.++....+.-. ..+....++.+++.+|+. +..++
T Consensus 101 ~-~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLP---------------------------------QADLDEIVESALKGAALWQEVKDKLNK 146 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHcCCcchhhhHhcC
Confidence 7 899999988654321000 001112345667778773 34455
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+.+++.+++|+
T Consensus 147 ~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~i~~~~d~ 218 (259)
T PRK14260 147 SAL-----GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR--SE-LTIAIVTHNMQQATRVSDF 218 (259)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCe
Confidence 544 499999999999999999999999999999999999999999999864 23 6777788999999999999
Q ss_pred EEEec-----CCeEEEEcCHHHHH
Q 000529 395 IILLS-----DGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~-----~G~iv~~G~~~~~~ 413 (1441)
+++|+ +|+++++|+++++.
T Consensus 219 i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 219 TAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred EEEEeccCCCCceEEEeCCHHHHh
Confidence 99997 59999999998874
No 474
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-33 Score=316.39 Aligned_cols=212 Identities=20% Similarity=0.305 Sum_probs=167.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCCC-----ccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|+++|+++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21113899999999875321 24579999999877
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1441)
++. ||+||+.++....+.... ..+....++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------------------------------KKKLDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHhh
Confidence 775 999999986433211000 00111235677889998652211111
Q ss_pred cccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000529 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1441)
Q Consensus 318 ~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vil 397 (1441)
...+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++. . +.+|++++|+.+++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEE
Confidence 1234599999999999999999999999999999999999999999999863 3 46777788999999999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 000529 398 LSDGQIVYQGPRELVL 413 (1441)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1441)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 475
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=359.08 Aligned_cols=212 Identities=24% Similarity=0.332 Sum_probs=177.4
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++|+++. +++++|+|+|++|++||.+||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 6999999998742 234699999999999999999999999999999999998763 479999999986
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-------RQSLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 992 (1441)
++ ..+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..+
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g 478 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGENG 478 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCCC
Confidence 54 346788999999998886 69999997642 11122 2346677777776543 466677644
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
..||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.||+|++|++
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~- 553 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED- 553 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-
Confidence 5699999999999999999999999999999999999999999999885 4799999999985 5678999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 899999985
No 476
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=8.8e-33 Score=308.72 Aligned_cols=196 Identities=28% Similarity=0.407 Sum_probs=163.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999988 9999999998754322 35799999999888
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+.+|+.||+.++...... .. ..+....++++++.+||.+..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN---------LS------------------------YQEARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccC---------CC------------------------HHHHHHHHHHHHHHcCChhhhhcChhh
Confidence 889999999986543210 00 001123467789999998888877755
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+.+++.++|+.+ ..+++|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAR-EQGCTILIVTHDNR-ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHH-HHhhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 23455666777765 56899999999
Q ss_pred cCCeE
Q 000529 399 SDGQI 403 (1441)
Q Consensus 399 ~~G~i 403 (1441)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 477
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-33 Score=318.21 Aligned_cols=228 Identities=21% Similarity=0.254 Sum_probs=177.8
Q ss_pred HhcCCCCCcceEEEeeeEEEEEeecccccCCChhhhhhHHHHHHhhhhhcCCCccccceeeeceEEEEeCCeEEEEEcCC
Q 000529 108 ERVGIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPP 187 (1441)
Q Consensus 108 ~~~g~~~p~v~v~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~llGp~ 187 (1441)
|...++++..-++++|+++.-. .+++|+|+|+++++||+++|+|||
T Consensus 10 ~~~~~~~~~~~l~~~nl~~~~~----------------------------------~~~~l~~vs~~i~~Ge~~~IiG~n 55 (274)
T PRK14265 10 DSATINPDHSVFEVEGVKVFYG----------------------------------GFLALVDVHLKIPAKKIIAFIGPS 55 (274)
T ss_pred cccccCCCCceEEEeeEEEEeC----------------------------------CeEEEeeeeeEEcCCCEEEEECCC
Confidence 3445666666788888876521 135899999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCC-----CccceEEEEcCCCCCCCCCCHHHHHHHHhHhcCCCchh
Q 000529 188 SSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRY 260 (1441)
Q Consensus 188 GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~ 260 (1441)
|||||||+++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++..++ .||.||+.++....+...
T Consensus 56 GsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~~~~-- 132 (274)
T PRK14265 56 GCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANGYKG-- 132 (274)
T ss_pred CCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcCchH--
Confidence 9999999999999986310 1289999999987431 12457999999987776 499999988643221000
Q ss_pred hhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccccccccccccCCChhhhhHHHHHH
Q 000529 261 EMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADTMVGDEMRRGVSGGQKKRVTTGE 336 (1441)
Q Consensus 261 ~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt~vg~~~~rGLSGGqrkRvsia~ 336 (1441)
+ ....++..++.+||. +..++.+. .|||||||||+||+
T Consensus 133 ----~-----------------------------~~~~~~~~l~~~~l~~~l~~~~~~~~~-----~LSgGq~qrv~LAr 174 (274)
T PRK14265 133 ----N-----------------------------LDELVEDSLRRAAIWEEVKDKLKEKGT-----ALSGGQQQRLCIAR 174 (274)
T ss_pred ----H-----------------------------HHHHHHHHHHHcccchhhHHHhcCCcc-----cCCHHHHHHHHHHH
Confidence 0 001123456666653 33444444 49999999999999
Q ss_pred HHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec---------CCeEEEEc
Q 000529 337 MMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS---------DGQIVYQG 407 (1441)
Q Consensus 337 al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~---------~G~iv~~G 407 (1441)
||+.+|++|+|||||+|||..++..+.+.|+++. . +++|+.++|+.+++.+++|++++|+ +|++++.|
T Consensus 175 aL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~-~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g 251 (274)
T PRK14265 175 AIAMKPDVLLMDEPCSALDPISTRQVEELCLELK--E-QYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFS 251 (274)
T ss_pred HHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeC
Confidence 9999999999999999999999999999999874 2 3677788999999999999999997 89999999
Q ss_pred CHHHHH
Q 000529 408 PRELVL 413 (1441)
Q Consensus 408 ~~~~~~ 413 (1441)
+++++.
T Consensus 252 ~~~~~~ 257 (274)
T PRK14265 252 PTEQMF 257 (274)
T ss_pred CHHHHH
Confidence 998874
No 478
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-33 Score=319.28 Aligned_cols=196 Identities=29% Similarity=0.417 Sum_probs=153.9
Q ss_pred eeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc---cccceEEEEeccCCCCCCCCC
Q 000529 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVT 945 (1441)
Q Consensus 869 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lT 945 (1441)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999865 347999999987532 223456999999987776 69
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCCCCcCCHHHHHHHHHHHHHhhCCCeeE
Q 000529 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS-------LVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 1018 (1441)
Q Consensus 946 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLl 1018 (1441)
|+|++.+.... ...+ ..++.++..++.+..+. ... ..+..|||||||||+||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHH----HHHHHHHHcChHHHHHhhccccceeec-cCCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764321 1111 12223333333222111 111 1235799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1019 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1019 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++ +.||++++|++ |++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999987 7899999999986 34 48999999985 799998875
No 479
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.1e-33 Score=366.06 Aligned_cols=206 Identities=24% Similarity=0.330 Sum_probs=164.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|++.+| +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 46899999999999999999999999999999999999998 9999999999877654 57899999988666 57
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
|++|||.++..- ...+...+ +.... ..++.++ .|+...||.+|+ .+
T Consensus 568 Ti~eNi~l~~~~----~~~~~i~~---------------------al~~~------~l~~~i~--~lp~gl~t~i~e-~G 613 (710)
T TIGR03796 568 TVRDNLTLWDPT----IPDADLVR---------------------ACKDA------AIHDVIT--SRPGGYDAELAE-GG 613 (710)
T ss_pred cHHHHhhCCCCC----CCHHHHHH---------------------HHHHh------CCHHHHH--hCcCcccceecc-CC
Confidence 999999875210 00010111 10000 0111121 356677899986 46
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
.+||||||||++||||++++|++|+||||||+||+.+..++.+.|++ .++| +|.++|..+ ....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T-~IiitHrl~-~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCT-CIIVAHRLS-TIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCE-EEEEecCHH-HHHhCCEEEEEeCC
Confidence 77999999999999999999999999999999999999999999875 2444 555666654 45679999999999
Q ss_pred eEEEEcCHHHHHH
Q 000529 402 QIVYQGPRELVLE 414 (1441)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1441)
+++++|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999874
No 480
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=315.77 Aligned_cols=206 Identities=21% Similarity=0.312 Sum_probs=166.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
++|+|+|+++++||+++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5899999999999999999999999999999999998741 01289999999987531 1246799999998878
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+. ||+||+.+.....+...+ .+....++++++.+|+.. ..+.
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 164 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR---------------------------------RVLDEAVERSLRGAALWDEVKDRLHE 164 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChhHHHHhhC
Confidence 75 999999887543321000 001123456677788753 2344
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.+ +.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+.+++.+.+|+
T Consensus 165 ~~-----~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~ 236 (272)
T PRK14236 165 NA-----FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDY 236 (272)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCE
Confidence 44 44999999999999999999999999999999999999999999998742 3 5677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 000529 395 IILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1441)
|++|++|+++..|+++++.
T Consensus 237 i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 237 TAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred EEEEECCEEEecCCHHHHh
Confidence 9999999999999988763
No 481
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-33 Score=315.23 Aligned_cols=208 Identities=23% Similarity=0.325 Sum_probs=167.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 369999999999999999999999999999999999987631 1379999999987531 113579999999989
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1441)
++.+||.||+.++....+...+ ++....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR---------------------------------DHLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCcchhhhhhhc
Confidence 9999999999876542211000 00112234445555543 3445
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
+.+++ ||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++. . ++++++++|+.+++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--K-VTTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCC
Confidence 55554 99999999999999999999999999999999999999999999864 2 3677778899999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988774
No 482
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=312.50 Aligned_cols=207 Identities=20% Similarity=0.297 Sum_probs=164.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCeeCCCC-----CccceEEEEcCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 358999999999999999999999999999999999865 3211389999999987431 123579999999887
Q ss_pred CCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc----cccc
Q 000529 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1441)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1441)
++ .||+||+.+.....+.... +.....+...++.+++. +..+
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~~ 143 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK---------------------------------AVLDEAVETSLKQAAIWDEVKDHLH 143 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCccchhhHHh
Confidence 77 7999999986543221000 00011234456666653 2344
Q ss_pred cccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcC
Q 000529 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1441)
Q Consensus 314 t~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D 393 (1441)
..+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + .++++++|+.+++.+.+|
T Consensus 144 ~~~~~-----LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d 215 (252)
T PRK14255 144 ESALS-----LSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISD 215 (252)
T ss_pred cCccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCC
Confidence 55544 999999999999999999999999999999999999999999998743 3 567778899999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 000529 394 DIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1441)
+|++|++|+++..|+..++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 216 KTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 483
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=357.59 Aligned_cols=209 Identities=22% Similarity=0.388 Sum_probs=165.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999998 9999999999887654 468999999987665 7
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
|++|||.++..-. ...+.+.++++ . .-.++.++ .|++..||.+|+. +
T Consensus 432 Ti~~Ni~~~~~~~---~~~~~i~~al~---~------------------------~~l~~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTEQ---YSREQIEEAAR---M------------------------AYAMDFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCCC---CCHHHHHHHHH---H------------------------hCcHHHHH--hcccccCceeCCC-C
Confidence 9999998853100 00011111000 0 00111122 3667789999964 5
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
+.||||||||++|||||+++|++|+||||||+||+.++..+.+.|++.. .+ .+++.++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~-~tvI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KN-RTSLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CC-CEEEEEecch-HHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999999999998752 33 4455566655 566789999999999
Q ss_pred eEEEEcCHHHHHH
Q 000529 402 QIVYQGPRELVLE 414 (1441)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1441)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 484
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.5e-33 Score=317.23 Aligned_cols=207 Identities=26% Similarity=0.318 Sum_probs=172.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCC--C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1441)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 56999999999999999999999999999999999999987 9999999998765432 35799999986 3
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
+.+..|+.|++.+...... .. ...+....++.+++.+||. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~---------~~------------------------~~~~~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL---------SL------------------------DKAERLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc---------cC------------------------CHHHHHHHHHHHHHHcCCChhHhhCC
Confidence 5678999999977532100 00 0011123467789999996 466776
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
++. ||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.. ..+++++.++|+.+++.+++|++
T Consensus 149 ~~~-----LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tiiivsH~~~~i~~~~d~i 222 (268)
T PRK10419 149 PPQ-----LSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQ-QFGTACLFITHDLRLVERFCQRV 222 (268)
T ss_pred Ccc-----CChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHH-HcCcEEEEEECCHHHHHHhCCEE
Confidence 655 999999999999999999999999999999999999999999998754 33567777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999988764
No 485
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=353.72 Aligned_cols=207 Identities=26% Similarity=0.334 Sum_probs=177.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc------cceEEEEcCCC--C
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1441)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 57999999999999999999999999999999999999988 9999999998765421 35799999986 5
Q ss_pred CCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-cccccc
Q 000529 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1441)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1441)
+++.+||.||+.+.....+... ..+....++++|+.+||+ ...++.
T Consensus 414 l~~~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~~~~ 460 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHGLLP---------------------------------GKAAAARVAWLLERVGLLPEHAWRY 460 (623)
T ss_pred cCCCCCHHHHHHHHHHHcCCCC---------------------------------HHHHHHHHHHHHHHcCCCHHHhhCC
Confidence 8889999999998654322100 001123467789999996 567888
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+++ |||||||||+||+||+.+|++|||||||+|||..++.++++.|+++.+ ..+.+|+.++|+.+++.+++|+|
T Consensus 461 ~~~-----LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~-~~g~tvi~isHdl~~v~~~~dri 534 (623)
T PRK10261 461 PHE-----FSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQR-DFGIAYLFISHDMAVVERISHRV 534 (623)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEE
Confidence 776 999999999999999999999999999999999999999999998765 33567788999999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1441)
++|++|++++.|+++++.
T Consensus 535 ~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 535 AVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999998874
No 486
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.1e-33 Score=353.63 Aligned_cols=201 Identities=28% Similarity=0.436 Sum_probs=165.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
.++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 35899999999999999999999999999999999999998 9999999999887654 467999999986665 6
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC------ccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL------DICADTM 315 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~ 315 (1441)
|++||+.++..-. . +..+.++++..|+ ++..||.
T Consensus 429 ti~~Ni~~~~~~~----~------------------------------------~~~i~~al~~~~l~~~i~~p~GldT~ 468 (574)
T PRK11160 429 TLRDNLLLAAPNA----S------------------------------------DEALIEVLQQVGLEKLLEDDKGLNAW 468 (574)
T ss_pred cHHHHhhcCCCcc----C------------------------------------HHHHHHHHHHcCCHHHHcCccccCch
Confidence 9999998863200 0 0012233334443 4567899
Q ss_pred cccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeE
Q 000529 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1441)
Q Consensus 316 vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~v 395 (1441)
+|+ .++.||||||||++|||+++++|++|+|||||++||+.++..+.+.|++.. .++|+| .++|..+.+ ..+|+|
T Consensus 469 vge-~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tvi-iitHr~~~~-~~~d~i 543 (574)
T PRK11160 469 LGE-GGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVL-MITHRLTGL-EQFDRI 543 (574)
T ss_pred hcC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEE-EEecChhHH-HhCCEE
Confidence 996 356799999999999999999999999999999999999999999998763 344544 456655544 569999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 000529 396 ILLSDGQIVYQGPRELVLE 414 (1441)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1441)
++|++|++++.|+++++.+
T Consensus 544 ~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEeCCeEEEeCCHHHHHh
Confidence 9999999999999998864
No 487
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-33 Score=356.39 Aligned_cols=212 Identities=26% Similarity=0.415 Sum_probs=178.3
Q ss_pred ceeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCcc
Q 000529 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1441)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 921 (1441)
..++|+|++|+++. +++.+|+|+|++++|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36999999998742 124699999999999999999999999999999999998663 47999999998
Q ss_pred CCc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000529 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR------QSLVGLPG 992 (1441)
Q Consensus 922 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~~ 992 (1441)
.++ ..+++.++||+|++.+++ -|++||+.++. + +. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 346778999999998876 59999997752 1 12 234577888998887653 4566654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
...||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 35699999999999999999999999999999999999999999999986 4899999999986 3467999999985
Q ss_pred cEEEEEcCC
Q 000529 1073 GREVYVGPL 1081 (1441)
Q Consensus 1073 G~~v~~G~~ 1081 (1441)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999885
No 488
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=313.96 Aligned_cols=208 Identities=23% Similarity=0.296 Sum_probs=168.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCC-----CccceEEEEcCCCCCC
Q 000529 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1441)
Q Consensus 166 ~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1441)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 5899999999999999999999999999999999999873 12479999999986421 1245699999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcc----cccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1441)
+ +||+||+.+.....+... . .+....+..+++.+||.+ ..++
T Consensus 101 ~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 146 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRP---------K------------------------LEIDDIVESALKDADLWDEIKHKIHK 146 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCcchhhhHhcC
Confidence 7 899999988643221100 0 001123566788888754 3344
Q ss_pred ccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCe
Q 000529 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1441)
Q Consensus 315 ~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~ 394 (1441)
.++ .||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++.. .+++|+.++|+..++.+++|+
T Consensus 147 ~~~-----~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~-~~~tiiivsH~~~~i~~~~d~ 220 (261)
T PRK14258 147 SAL-----DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLR-SELTMVIVSHNLHQVSRLSDF 220 (261)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHhcCE
Confidence 444 49999999999999999999999999999999999999999999987543 356677788999999999999
Q ss_pred EEEecC-----CeEEEEcCHHHHH
Q 000529 395 IILLSD-----GQIVYQGPRELVL 413 (1441)
Q Consensus 395 vilL~~-----G~iv~~G~~~~~~ 413 (1441)
|++|++ |+++++|+++++.
T Consensus 221 i~~l~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 221 TAFFKGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred EEEEccCCCcCceEEEeCCHHHHH
Confidence 999999 9999999999874
No 489
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.8e-33 Score=361.63 Aligned_cols=206 Identities=25% Similarity=0.405 Sum_probs=161.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+| +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 46999999999999999999999999999999999999998 9999999999887654 46899999988665 57
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCccccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1441)
||+|||.++.... + .+...+++ +.. ..++.++ .|++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~~---~-~e~i~~al---~~a------------------------~l~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTDT---P-DEEIMAAA---KAA------------------------NAHDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCCC---C-HHHHHHHH---HHc------------------------CCHHHHH--hCCCccCCcccC-CC
Confidence 9999999863210 0 00000000 000 0011122 355678999996 35
Q ss_pred cCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000529 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1441)
Q Consensus 322 rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~~G 401 (1441)
..||||||||++||||++++|+||+||||||+||+.+...+.+ ... ..+.+++.++|..+ ..+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~----~~~~TvIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS----RASRTVLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc----cCCCeEEEEeccHH-HHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999998887 221 23455566777665 55779999999999
Q ss_pred eEEEEcCHHHHHH
Q 000529 402 QIVYQGPRELVLE 414 (1441)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1441)
+++++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 490
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-33 Score=316.57 Aligned_cols=211 Identities=24% Similarity=0.380 Sum_probs=164.3
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|+++.++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 367888887653 123599999999999999999999999999999999998653 479999999865
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLV-G-----LPGV 993 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~ 993 (1441)
.. ...++.++|++|++.+++. |++||+.+... ... ...+++.++.+++.+..+.+. | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2345679999999887775 99999976421 111 112344455555443332211 0 1124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999986 5899999999986 34 56999999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 99988764
No 491
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=315.77 Aligned_cols=204 Identities=16% Similarity=0.298 Sum_probs=162.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcceEEEECCeeCCCC-----CccceEEEEcCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQH 234 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 234 (1441)
.++|+|+|++|++||+++|+|+|||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|+
T Consensus 37 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~ 113 (271)
T PRK14238 37 DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKT---TGKILYRDQNIFDKSYSVEELRTNVGMVFQK 113 (271)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCC---ceeEEECCEEcccccccHHHHhhhEEEEecC
Confidence 358999999999999999999999999999999999986 45 99999999987421 124579999999
Q ss_pred CCCCCCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCC----cc
Q 000529 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL----DI 310 (1441)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~ 310 (1441)
+.+++ .||+||+.++.+..+.... ......+...++.+++ .+
T Consensus 114 ~~~~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~~~~~l~~ 159 (271)
T PRK14238 114 PNPFP-KSIYDNVTYGPKIHGIKDK---------------------------------KTLDEIVEKSLRGAAIWDELKD 159 (271)
T ss_pred Ccccc-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchHHH
Confidence 87776 5999999987543211000 0001123344555543 23
Q ss_pred ccccccccccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHh
Q 000529 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1441)
Q Consensus 311 ~~dt~vg~~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1441)
..+..+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+.+++.+
T Consensus 160 ~~~~~~-----~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivsH~~~~i~~ 231 (271)
T PRK14238 160 RLHDNA-----YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELK--KD-YSIIIVTHNMQQAAR 231 (271)
T ss_pred HHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHH--cC-CEEEEEEcCHHHHHH
Confidence 334444 4499999999999999999999999999999999999999999999874 23 667778899999999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 000529 391 LFDDIILLSDGQIVYQGPRELVL 413 (1441)
Q Consensus 391 l~D~vilL~~G~iv~~G~~~~~~ 413 (1441)
++|++++|++|++++.|+.+++.
T Consensus 232 ~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 232 ISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988763
No 492
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-33 Score=329.40 Aligned_cols=228 Identities=26% Similarity=0.376 Sum_probs=192.6
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
-++.+|++.++ +..++|+||||++++||++||+|.||||||||+|+|+|... +.+|+|.++|.+.
T Consensus 8 ll~~~~i~K~F-------------ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSF-------------GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEc-------------CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 35677776543 45689999999999999999999999999999999999766 4589999999986
Q ss_pred Ccc----ccceEEEEeccCCCCCCCCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000529 923 KQE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRL-PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1441)
Q Consensus 923 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 997 (1441)
... ....-++.|.|+..+.|++||.||+.++...+. ..-.+.+...+...++|+.+++....+++++ .||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCC
Confidence 432 234568999999999999999999988765443 2335666777788999999999644777766 599
Q ss_pred HHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCcEEEE
Q 000529 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1441)
Q Consensus 998 gGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~ 1077 (1441)
.||||.|.|||||..+++||+||||||.|+......+.+.++++.++|.+||++||.++ ++++.||++.+|.+ |+.+-
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999997 79999999999985 89999
Q ss_pred EcCC-CCc-chhHHHHH
Q 000529 1078 VGPL-GHH-SCHLISYF 1092 (1441)
Q Consensus 1078 ~G~~-~~~-~~~~~~yf 1092 (1441)
.++. ++. .++++...
T Consensus 226 ~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 226 TRPTAAETSEDELVRLM 242 (500)
T ss_pred ecccccCCCHHHHHHHh
Confidence 8883 442 34455543
No 493
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-33 Score=300.66 Aligned_cols=170 Identities=29% Similarity=0.415 Sum_probs=148.1
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccCCc
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 924 (1441)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4667766542 2469999999999999999999999999999999999865 348999999987542
Q ss_pred -----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000529 925 -----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1441)
Q Consensus 925 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 999 (1441)
...++.++|++|++.+++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987532 8999
Q ss_pred HHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 1000 qrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
||||++||+||+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999986 466689999999863
No 494
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=275.90 Aligned_cols=215 Identities=25% Similarity=0.325 Sum_probs=179.1
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
++..+++++.+ +..++|.||+++.+.||.+.++||||||||||+++|.=... +.+|+..|.|...
T Consensus 2 sirv~~in~~y-------------g~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~f 66 (242)
T COG4161 2 SIQLNGINCFY-------------GAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred ceEEccccccc-------------ccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEeccccc
Confidence 35566666554 44679999999999999999999999999999999986544 2467777766432
Q ss_pred C-------c--cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000529 923 K-------Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1441)
Q Consensus 923 ~-------~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 993 (1441)
+ + ...|+.+|.|+|+..++|.+||.|||.=+ -.+. ...++++.+.+..++++.+.|.+.+|+. +
T Consensus 67 d~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enliea-p~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~-----p 139 (242)
T COG4161 67 DFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEA-PCRV-LGLSKDQALARAEKLLKRLRLKPYADRY-----P 139 (242)
T ss_pred ccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhh-hHHH-hCCCHHHHHHHHHHHHHHhccccccccC-----c
Confidence 1 1 23567899999999999999999998543 2222 2356677778889999999999999986 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecCc
Q 000529 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1441)
Q Consensus 994 ~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~gG 1073 (1441)
-.|||||+|||+|||||+.+|++|++||||+.|||+-..++.+.|++++..|.|=+++||.... .-+.+.+++.|.+ |
T Consensus 140 lhlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g 217 (242)
T COG4161 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-G 217 (242)
T ss_pred eecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-C
Confidence 4699999999999999999999999999999999999999999999999999999999998653 4457899999985 8
Q ss_pred EEEEEcCC
Q 000529 1074 REVYVGPL 1081 (1441)
Q Consensus 1074 ~~v~~G~~ 1081 (1441)
+++..|+.
T Consensus 218 ~ive~g~a 225 (242)
T COG4161 218 HIVEQGDA 225 (242)
T ss_pred eeEeecch
Confidence 99999985
No 495
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=9.1e-33 Score=347.20 Aligned_cols=214 Identities=22% Similarity=0.248 Sum_probs=174.3
Q ss_pred eEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcC-----
Q 000529 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG----- 919 (1441)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g----- 919 (1441)
+++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 5677777652 3469999999999999999999999999999999999741013479999872
Q ss_pred ------------------ccCC----------c---cccceEEEEeccC-CCCCCCCCHHHHHHHHHHhcCCCCCCHHHH
Q 000529 920 ------------------YPKK----------Q---ETFARISGYCEQN-DIHSPFVTVYESLFYSAWLRLPPEVNSETR 967 (1441)
Q Consensus 920 ------------------~~~~----------~---~~~~~~~gyv~Q~-~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~ 967 (1441)
.++. . ...++.++|++|+ +.+++.+||+|++.+...... ...++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHHH
Confidence 1110 0 1134568999997 677888999999988654321 233444
Q ss_pred HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHh-cCC
Q 000529 968 KMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGR 1046 (1441)
Q Consensus 968 ~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~-~g~ 1046 (1441)
++++.++++.+||.+..++.+ ..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 567889999999988777764 46999999999999999999999999999999999999999999999965 489
Q ss_pred EEEEEecCCcHHHHHhhCeEEEEecCcEEEEEcCC
Q 000529 1047 TVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1441)
Q Consensus 1047 tvi~~~H~~~~~i~~~~D~vllL~~gG~~v~~G~~ 1081 (1441)
|||++||++. .+.+.||++++|++ |++++.|+.
T Consensus 221 tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 221 SMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred EEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 9999999986 46678999999985 799988876
No 496
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.3e-33 Score=314.31 Aligned_cols=206 Identities=26% Similarity=0.417 Sum_probs=161.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 45899999999999999999999999999999999999998 9999999998754322 35799999998665 57
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHc--CCccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL--GLDICADTMVGDE 319 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 319 (1441)
||+||+.+... .. ..+...+.. . ....+..++.+ |++...+..+++
T Consensus 91 tv~~nl~~~~~--~~--~~~~~~~~~---~------------------------~~~~~~~l~~l~~~~~~~~~~~~~~- 138 (237)
T cd03252 91 SIRDNIALADP--GM--SMERVIEAA---K------------------------LAGAHDFISELPEGYDTIVGEQGAG- 138 (237)
T ss_pred hHHHHhhccCC--CC--CHHHHHHHH---H------------------------HcCcHHHHHhCcccccchhhcCCCc-
Confidence 99999987432 10 000000000 0 00112344555 555555555544
Q ss_pred cccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000529 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1441)
Q Consensus 320 ~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~ 399 (1441)
|||||||||+|||+++.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+.+++ +.+|++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 139 ----LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--A-GRTVIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--C-CCEEEEEeCCHHHH-HhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999874 3 45667778888887 4699999999
Q ss_pred CCeEEEEcCHHHHHH
Q 000529 400 DGQIVYQGPRELVLE 414 (1441)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1441)
+|++++.|+++++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 497
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=317.06 Aligned_cols=211 Identities=24% Similarity=0.311 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCeeCCCCC----ccceEEEEcCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV----PERTAAYISQHDNHI 238 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 238 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|. ...+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46899999999999999999999999999999999998751 012899999999876432 245799999998777
Q ss_pred CCCCHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCcccccccccc
Q 000529 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1441)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1441)
+ +||+||+.++........ ..+....+..+++.+||.+..++...
T Consensus 114 ~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l~- 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP---------------------------------RKEFRGVAQARLTEVGLWDAVKDRLS- 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhHhh-
Confidence 7 899999988643211000 00111234567888888653222111
Q ss_pred ccccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000529 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1441)
Q Consensus 319 ~~~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL 398 (1441)
...+.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++.. + .+|++++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 12344999999999999999999999999999999999999999999998642 3 57777889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 000529 399 SDGQIVYQGPRELVL 413 (1441)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1441)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 498
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=8.1e-33 Score=309.92 Aligned_cols=199 Identities=24% Similarity=0.371 Sum_probs=162.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCeeCCCCCc---cceEEEEcCCCCCCCCC
Q 000529 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1441)
Q Consensus 165 ~~iL~~vs~~i~~Ge~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1441)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~ 95 (225)
T PRK10247 20 AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-D 95 (225)
T ss_pred ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCeEEECCEEcCcCCHHHHHhccEEEeccccccc-c
Confidence 35999999999999999999999999999999999999887 9999999998765432 357999999987776 5
Q ss_pred CHHHHHHHHhHhcCCCchhhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhhHHHHHHHHHHcCCc-ccccccccccc
Q 000529 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVGDEM 320 (1441)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~ 320 (1441)
||+||+.+.....+. + . ....++.+++.+||. ...++.+++
T Consensus 96 tv~enl~~~~~~~~~--~---------~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~~-- 137 (225)
T PRK10247 96 TVYDNLIFPWQIRNQ--Q---------P-------------------------DPAIFLDDLERFALPDTILTKNIAE-- 137 (225)
T ss_pred cHHHHHHhHHhhcCC--C---------h-------------------------HHHHHHHHHHHcCCChHHhcCCccc--
Confidence 999999885432210 0 0 012345688999995 466777765
Q ss_pred ccCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHhHhcCCeEEEEEecChhhHHhhcCeEEEec-
Q 000529 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS- 399 (1441)
Q Consensus 321 ~rGLSGGqrkRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~l~D~vilL~- 399 (1441)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+++. .+|++++|+
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sh~~~~~~-~~d~i~~l~~ 212 (225)
T PRK10247 138 ---LSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQ-NIAVLWVTHDKDEIN-HADKVITLQP 212 (225)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECChHHHH-hCCEEEEEec
Confidence 99999999999999999999999999999999999999999999876533 456666788888874 699999994
Q ss_pred CCeEEEEcCHH
Q 000529 400 DGQIVYQGPRE 410 (1441)
Q Consensus 400 ~G~iv~~G~~~ 410 (1441)
++..+.+|.++
T Consensus 213 ~~~~~~~~~~~ 223 (225)
T PRK10247 213 HAGEMQEARYE 223 (225)
T ss_pred ccchHhhhhhc
Confidence 66677777654
No 499
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=320.86 Aligned_cols=221 Identities=24% Similarity=0.293 Sum_probs=173.9
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCC---ceEEEEEEEcC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 919 (1441)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899887753 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000529 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP---------EVN-SETRKMFIEEVMELVELKPLR 984 (1441)
Q Consensus 920 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 984 (1441)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... .+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87542 123567999999988777 59999998865332100 011 122345678899999885322
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhC
Q 000529 985 QSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1064 (1441)
Q Consensus 985 ~~~vg~~~~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D 1064 (1441)
+..... .+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLDD-NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhcC-ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 111111 2457999999999999999999999999999999999999999999999976 589999999986 4678899
Q ss_pred eEE-EEecCcEEEEEcCC
Q 000529 1065 ELF-LMKRGGREVYVGPL 1081 (1441)
Q Consensus 1065 ~vl-lL~~gG~~v~~G~~ 1081 (1441)
+++ +|+ .|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 566 5899999885
No 500
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-34 Score=330.29 Aligned_cols=212 Identities=23% Similarity=0.346 Sum_probs=178.7
Q ss_pred eeeEeceEEEEeccchhhccCCCCCceeeeeceeEEEeCCeEEEEeccCCCChHHHHHhhcCCCCCceEEEEEEEcCccC
Q 000529 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1441)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 922 (1441)
.++++|++++++.+ ..++|+|+|+++++||.+||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998643 3469999999999999999999999999999999999765 3479999999886
Q ss_pred Cc---cccceEEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-------ccccCCC
Q 000529 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLPG 992 (1441)
Q Consensus 923 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-------~~vg~~~ 992 (1441)
.. ...++.++++.|...++. -|+++||.++. ++.+ ++.+.++++.+||.+... +.+|+.
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 335677899999876664 69999997642 2233 345788999999987643 346654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCeeEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCCcHHHHHhhCeEEEEecC
Q 000529 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1441)
Q Consensus 993 ~~~LSgGqrqRv~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~~~~~i~~~~D~vllL~~g 1072 (1441)
.+.||||||||++|||+|++|.++++|||||.|||+.+.++|++.|.+-++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999988764 899999999976 4688999999985
Q ss_pred cEEEEEcCCC
Q 000529 1073 GREVYVGPLG 1082 (1441)
Q Consensus 1073 G~~v~~G~~~ 1082 (1441)
|++++.|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 8999999864
Done!