Query 000533
Match_columns 1440
No_of_seqs 277 out of 2203
Neff 3.6
Searched_HMMs 29240
Date Tue Mar 26 17:30:34 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000533.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_305-308//hhsearch_pdb/000533hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 1.0 1 1 486.1 23.1 259 18-276 24-282 (350)
2 4fie_A Serine/threonine-protei 1.0 1 1 461.7 26.8 255 17-276 150-406 (423)
3 4fih_A Serine/threonine-protei 1.0 1 1 460.0 26.2 254 18-276 74-329 (346)
4 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 458.4 22.5 260 14-276 28-296 (311)
5 3ubd_A Ribosomal protein S6 ki 1.0 1 1 451.8 18.7 257 18-277 24-288 (304)
6 3hyh_A Carbon catabolite-derep 1.0 1 1 446.1 26.4 263 8-276 4-268 (275)
7 3fpq_A Serine/threonine-protei 1.0 1 1 444.3 27.8 260 12-276 19-288 (290)
8 4g3f_A NF-kappa-beta-inducing 1.0 1 1 440.0 23.0 246 17-271 57-310 (336)
9 3uto_A Twitchin; kinase, muscl 1.0 1 1 438.7 25.6 260 13-276 152-416 (573)
10 3v5w_A G-protein coupled recep 1.0 1 1 438.0 26.8 258 17-278 188-457 (689)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=486.08 Aligned_cols=259 Identities=30% Similarity=0.549 Sum_probs=244.8
Q ss_pred CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEE
Q ss_conf 85679847411495899999996799099999931563488889999999999981799982138889981896999995
Q 000533 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILE 97 (1440)
Q Consensus 18 gRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~LYLVME 97 (1440)
++|++++.||+|+||+||+|+++.+++.||+|++.+........+.+.+|+.+|++|+|||||++++++++++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 25588479702779399999988999899999986587897999999999999987799898919999998999999994
Q ss_pred ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 14899988986119999999999999999999999999987913111247818986799399982066322355776554
Q 000533 98 YVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH 177 (1440)
Q Consensus 98 YieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es~~~s~ 177 (1440)
||+||+|.++|...+...++|..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+........
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 183 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCCCEEECCCCCCCC
T ss_conf 88998399999973899997899999999999999999989915135978997987899989764652144068854101
Q ss_pred CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 55699644551223105888675036589999999829999999998358999762489999999997899999997231
Q 000533 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257 (1440)
Q Consensus 178 t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rpplP~~ISeELkDLIkkLLqk 257 (1440)
+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+..+.+.++.....++++..+|+++.+||.+||++
T Consensus 184 ~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~ 263 (350)
T 4b9d_A 184 ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKR 263 (350)
T ss_dssp HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 45788360399998799989599999999999999978799899699999999980899999755799999999998558
Q ss_pred CCCCCCCHHHHHCCHHHHH
Q ss_conf 0079999989960977999
Q 000533 258 DARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 258 DPekRPSAeEILkHPWLQe 276 (1440)
||.+||++.|+++||||++
T Consensus 264 dP~~R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 264 NPRDRPSVNSILEKGFIAK 282 (350)
T ss_dssp SGGGSCCHHHHHTSHHHHT
T ss_pred CHHHCCCHHHHHCCHHHHC
T ss_conf 9667908999963997616
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=461.66 Aligned_cols=255 Identities=34% Similarity=0.587 Sum_probs=232.7
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 88567984741149589999999679909999993156348888999999999998179998213888998189699999
Q 000533 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIIL 96 (1440)
Q Consensus 17 dgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~LYLVM 96 (1440)
..+|++++.||+|+||.||+|+++.+|+.||||++.+.... ..+.+.+|+.+|+.++|||||++++++.+++.+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 68438616962481848999999999989999998625546--8999999999998579989871689999899999999
Q ss_pred EECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 51489998898611999999999999999999999999998791311124781898679939998206632235577655
Q 000533 97 EYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNT 176 (1440)
Q Consensus 97 EYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es~~~s 176 (1440)
|||+||+|.++++. +.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+.......
T Consensus 228 Ey~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 228 EFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp ECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred ECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCC
T ss_conf 69899828988761---698999999999999999999998890446578777898589998980372654777887643
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHH
Q ss_conf 4556996445512231058886750365899999998299999999983589997624899--99999997899999997
Q 000533 177 HSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP--PIPESLSPDITDFLRQC 254 (1440)
Q Consensus 177 ~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rp--plP~~ISeELkDLIkkL 254 (1440)
.+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....+..+.....+ ..+..+++++.+||.+|
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~ 384 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL 384 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 46664747279999779999968999999999999997879989869999999997279988765012999999999998
Q ss_pred HHHCCCCCCCHHHHHCCHHHHH
Q ss_conf 2310079999989960977999
Q 000533 255 FKKDARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 255 LqkDPekRPSAeEILkHPWLQe 276 (1440)
|.+||.+||++.|+++||||++
T Consensus 385 L~~dP~~R~ta~ell~Hp~~~~ 406 (423)
T 4fie_A 385 LVRDPAQRATAAELLKHPFLAK 406 (423)
T ss_dssp SCSSTTTSCCHHHHTTCGGGGG
T ss_pred CCCCHHHCCCHHHHHCCHHHCC
T ss_conf 6789568909999960987568
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=460.04 Aligned_cols=254 Identities=34% Similarity=0.589 Sum_probs=231.7
Q ss_pred CCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEEE
Q ss_conf 85679847411495899999996799099999931563488889999999999981799982138889981896999995
Q 000533 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILE 97 (1440)
Q Consensus 18 gRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~LYLVME 97 (1440)
.+|++.++||+|+||+||+|+++.+|+.||+|++.+.... ..+.+.+|+.+|+.++|||||++++++.+++.+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH--HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 7538707960272829999999899989999998527656--89999999999986799899919999998999999996
Q ss_pred ECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 14899988986119999999999999999999999999987913111247818986799399982066322355776554
Q 000533 98 YVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH 177 (1440)
Q Consensus 98 YieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es~~~s~ 177 (1440)
||+||+|.+++.. ++++|..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+........
T Consensus 152 y~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 152 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCCCCCC
T ss_conf 9899808999871---8989999999999999999999988835562788997887999889902757536678877534
Q ss_pred CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC--CCCCCCHHHHHHHHHHH
Q ss_conf 5569964455122310588867503658999999982999999999835899976248999--99999978999999972
Q 000533 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP--IPESLSPDITDFLRQCF 255 (1440)
Q Consensus 178 t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rpp--lP~~ISeELkDLIkkLL 255 (1440)
+.+||+.|||||++....|+.++||||+||++|+|++|.+||.+.+..+.+..+.....+. .+..+++++.+||.+||
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L 308 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLL 308 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHS
T ss_pred CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 65627582799997799999689999999999999978799898599999999971799988750229999999999986
Q ss_pred HHCCCCCCCHHHHHCCHHHHH
Q ss_conf 310079999989960977999
Q 000533 256 KKDARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 256 qkDPekRPSAeEILkHPWLQe 276 (1440)
.+||.+|||+.|+++||||++
T Consensus 309 ~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 309 VRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp CSSTTTSCCHHHHTTCGGGGG
T ss_pred CCCHHHCCCHHHHHCCHHHCC
T ss_conf 799568909999960986568
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=458.37 Aligned_cols=260 Identities=28% Similarity=0.536 Sum_probs=232.5
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCH-HHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 423885679847411495899999996799099999931563488-8899999999999817999821388899818969
Q 000533 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHL 92 (1440)
Q Consensus 14 eiLdgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lse-Eeie~LlREIkILKrLkHPNIVKLldVfedd~~L 92 (1440)
+.--++|++++.||+|+||+||+|+++.+++.||+|++.+..... ...+.+.+|+.+|++++|||||++++++++++.+
T Consensus 28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 107 (311)
T 4aw0_A 28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107 (311)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred CCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 88852368988983164849999999999989999998888877978999999999999867998989199999738989
Q ss_pred EEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 99995148999889861199999999999999999999999999879131112478189867993999820663223557
Q 000533 93 HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEA 172 (1440)
Q Consensus 93 YLVMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es 172 (1440)
|||||||+||+|.++++.. +.++|..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 108 yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCC
T ss_conf 9999648998999999874--99999999999999999999999887826878789969858988899876875025778
Q ss_pred C--CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 7--65545569964455122310588867503658999999982999999999835899976248999999999789999
Q 000533 173 D--VNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDF 250 (1440)
Q Consensus 173 ~--~~s~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rpplP~~ISeELkDL 250 (1440)
. ....+.|||+.|||||++.+..|+.++||||+||++|+|++|.+||.+.+....+.++... ...+|..+++++.+|
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~-~~~~p~~~s~~~~dl 264 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL-EYDFPEKFFPKARDL 264 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCTTCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCHHHHHH
T ss_conf 7765436755680307998976899996898998999999997498998997999999999719-999996569999999
Q ss_pred HHHHHHHCCCCCCCHHH------HHCCHHHHH
Q ss_conf 99972310079999989------960977999
Q 000533 251 LRQCFKKDARQRPDAKT------LLSHPWIQN 276 (1440)
Q Consensus 251 IkkLLqkDPekRPSAeE------ILkHPWLQe 276 (1440)
|.+||.+||.+||++.| +++||||+.
T Consensus 265 i~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp HHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred HHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCC
T ss_conf 99976289757809679758779877987589
No 5
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=451.82 Aligned_cols=257 Identities=28% Similarity=0.478 Sum_probs=233.2
Q ss_pred CCEEEEEEECCCCCEEEEEEEEC---CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
Q ss_conf 85679847411495899999996---799099999931563488889999999999981799982138889981896999
Q 000533 18 NKYMLGDEIGKGAYGRVYKGLDL---ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHI 94 (1440)
Q Consensus 18 gRYkILEkLGkGSFGtVYKArDk---~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~LYL 94 (1440)
++|++++.||+|+||+||+|++. .+++.||+|++.+......+...+.+|+.+|++++|||||++++++++++.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 56589889721888399999985588789799999981577684789999999999987799799909999998999999
Q ss_pred EEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCC
Q ss_conf 99514899988986119999999999999999999999999987913111247818986799399982066322355776
Q 000533 95 ILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADV 174 (1440)
Q Consensus 95 VMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es~~ 174 (1440)
|||||+||+|.++++.. +++++..++.|+.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.......
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred EEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCCCC
T ss_conf 99757998889999755--9999999999999999999999977995888878995786899887623663433268876
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 55455699644551223105888675036589999999829999999998358999762489999999997899999997
Q 000533 175 NTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254 (1440)
Q Consensus 175 ~s~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rpplP~~ISeELkDLIkkL 254 (1440)
...+.+||+.|||||++.+..|+.++||||+||++|+|++|.+||.+.+..+.+.++... ..++|..+|+++.+||.+|
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~ 260 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRML 260 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHH
T ss_conf 304544181507999965688787776361199999998598998984999999999718-9999876899999999998
Q ss_pred HHHCCCCCCC-----HHHHHCCHHHHHH
Q ss_conf 2310079999-----9899609779999
Q 000533 255 FKKDARQRPD-----AKTLLSHPWIQNC 277 (1440)
Q Consensus 255 LqkDPekRPS-----AeEILkHPWLQel 277 (1440)
|++||.+||+ ++|+++||||+..
T Consensus 261 L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 261 FKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp TCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCHHHCCCCCCCCHHHHHCCCCCCCC
T ss_conf 6469878799986789999769040378
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=446.12 Aligned_cols=263 Identities=24% Similarity=0.454 Sum_probs=233.9
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCH-HHHHHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 655445423885679847411495899999996799099999931563488-8899999999999817999821388899
Q 000533 8 SAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLGSL 86 (1440)
Q Consensus 8 S~FakgeiLdgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lse-Eeie~LlREIkILKrLkHPNIVKLldVf 86 (1440)
.....|+.+ ++|++++.||+|+||+||+|++..+++.||+|++.+..... .....+.+|+.++++++|||||++++++
T Consensus 4 ~~l~~G~~i-g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~ 82 (275)
T 3hyh_A 4 SSLADGAHI-GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82 (275)
T ss_dssp -----------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCCCCCCEE-ECEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE
T ss_conf 878999893-3868999982176819999999999989999998378867878999999999999877998999299999
Q ss_pred EECCEEEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCC
Q ss_conf 81896999995148999889861199999999999999999999999999879131112478189867993999820663
Q 000533 87 KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVA 166 (1440)
Q Consensus 87 edd~~LYLVMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLA 166 (1440)
++++.+|+||||| +|+|.+++... +++++..++.|+.|++.||.|||++||+||||||+|||++.++.+||+|||+|
T Consensus 83 ~~~~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla 159 (275)
T 3hyh_A 83 KSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp ECSSEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred EECCEEEEEEECC-CCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCC
T ss_conf 9899899999278-99789999874--99999999999999999999999889306668758768879998999454777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHCCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 223557765545569964455122310588-8675036589999999829999999998358999762489999999997
Q 000533 167 TKLTEADVNTHSVVGTPYWMAPEVIEMSGV-CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSP 245 (1440)
Q Consensus 167 r~L~es~~~s~t~vGTp~YmAPEVLks~~Y-S~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rpplP~~ISe 245 (1440)
+...... ...+.+||+.|||||++.+..| +.++||||+||++|+|++|++||.+.+... +.+.+......+|..+|+
T Consensus 160 ~~~~~~~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~-~~~~i~~~~~~~p~~~s~ 237 (275)
T 3hyh_A 160 NIMTDGN-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVYTLPKFLSP 237 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTSCH
T ss_pred EECCCCC-CCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHCCCCCCCCCCCH
T ss_conf 2667887-46770289352774550689888983656878999999998879989989999-999997499999877999
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHCCHHHHH
Q ss_conf 8999999972310079999989960977999
Q 000533 246 DITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 246 ELkDLIkkLLqkDPekRPSAeEILkHPWLQe 276 (1440)
++.+||.+||++||.+|||+.|+++||||+.
T Consensus 238 ~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 238 GAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 9999999986589668919999971920065
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=444.26 Aligned_cols=260 Identities=29% Similarity=0.515 Sum_probs=230.3
Q ss_pred CCCCCCCCE-EEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE--
Q ss_conf 454238856-79847411495899999996799099999931563488889999999999981799982138889981--
Q 000533 12 KSKTLDNKY-MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKT-- 88 (1440)
Q Consensus 12 kgeiLdgRY-kILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfed-- 88 (1440)
.+...+++| ++.++||+|+||+||+|++..++..||+|.+..........+.+.+|+.+|++++|||||++++++++
T Consensus 19 ~~~~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~ 98 (290)
T 3fpq_A 19 VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV 98 (290)
T ss_dssp EEECTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECC
T ss_conf 17678983689506970073859999998899909999998325479899999999999998679989991988996436
Q ss_pred --CCEEEEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCEEECC-CCCEEEEEC
Q ss_conf --896999995148999889861199999999999999999999999999879--131112478189867-993999820
Q 000533 89 --RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG--VIHRDIKGANILTTK-EGLVKLADF 163 (1440)
Q Consensus 89 --d~~LYLVMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkG--IVHRDIKPENILLds-DG~VKLiDF 163 (1440)
+..+|||||||+||+|.++++.. +++++..++.|+.||+.||.|||+++ |+||||||+|||++. ++.+||+||
T Consensus 99 ~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 99 KGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp TTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCEEEEEC
T ss_conf 7886899999487978999999866--99999999999999999999999779988716457426658889998899727
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC--CCCC
Q ss_conf 66322355776554556996445512231058886750365899999998299999999983589997624899--9999
Q 000533 164 GVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP--PIPE 241 (1440)
Q Consensus 164 GLAr~L~es~~~s~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rp--plP~ 241 (1440)
|+|+..... ...+.+||+.|||||++.+ .|+.++||||+||++|+|++|++||.+......+.+.+..... .++.
T Consensus 177 Gla~~~~~~--~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 253 (290)
T 3fpq_A 177 GLATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK 253 (290)
T ss_dssp TGGGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGG
T ss_pred CCCEECCCC--CCCCCCCCCCCCCHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
T ss_conf 688767987--6677624802018978079-9992788887999999999788999999819999999973899877776
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHH
Q ss_conf 99978999999972310079999989960977999
Q 000533 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 242 ~ISeELkDLIkkLLqkDPekRPSAeEILkHPWLQe 276 (1440)
.+++++.+||.+||.+||.+|||+.|+++||||++
T Consensus 254 ~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 254 VAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 57899999999976389657919999956904058
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=440.04 Aligned_cols=246 Identities=30% Similarity=0.495 Sum_probs=222.5
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
Q ss_conf 88567984741149589999999679909999993156348888999999999998179998213888998189699999
Q 000533 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIIL 96 (1440)
Q Consensus 17 dgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~LYLVM 96 (1440)
.+.|++.++||+|+||+||+|+++.++..||+|++++.... .+|+.+++.++|||||++++++++++.+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-------VEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-------THHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHHH-------HHHHHHHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 33517686851387809999998899989999997888869-------99999998579989993999999899999999
Q ss_pred EECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEEEECCCCCCCCCCCC-
Q ss_conf 514899988986119999999999999999999999999987913111247818986799-399982066322355776-
Q 000533 97 EYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEG-LVKLADFGVATKLTEADV- 174 (1440)
Q Consensus 97 EYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG-~VKLiDFGLAr~L~es~~- 174 (1440)
|||+||+|.++++.. +++++..++.|+.|++.||.|||+++|+||||||+|||++.++ .+||+|||+|+.+.....
T Consensus 130 Ey~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCCCC
T ss_conf 665998699999876--999999999999999999999998890426167788799589997999627877685678765
Q ss_pred ----CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCHHHH
Q ss_conf ----554556996445512231058886750365899999998299999999983589997624899--99999997899
Q 000533 175 ----NTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP--PIPESLSPDIT 248 (1440)
Q Consensus 175 ----~s~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rp--plP~~ISeELk 248 (1440)
.....+||+.|||||++.+..|+.++||||+||++|+|++|++||.+........++.....+ .+++.+++++.
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~ 287 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA 287 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred CCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHH
T ss_conf 40221785455802008999889998908999999999999997869989989999999998089980025866799999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHCC
Q ss_conf 99999723100799999899609
Q 000533 249 DFLRQCFKKDARQRPDAKTLLSH 271 (1440)
Q Consensus 249 DLIkkLLqkDPekRPSAeEILkH 271 (1440)
+||.+||++||.+|||+.|+++|
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99999762897689599999999
No 9
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=438.74 Aligned_cols=260 Identities=27% Similarity=0.432 Sum_probs=233.2
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 54238856798474114958999999967990999999315634888899999999999817999821388899818969
Q 000533 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHL 92 (1440)
Q Consensus 13 geiLdgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseEeie~LlREIkILKrLkHPNIVKLldVfedd~~L 92 (1440)
...+-++|++++.||+|+||.||+|+++.+|+.||+|++.... ....+.+.+|+.+|+.++|||||+++++++++..+
T Consensus 152 ~~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~ 229 (573)
T 3uto_A 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM 229 (573)
T ss_dssp SSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEE
T ss_pred CCCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECCC--HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 9868536189889961648499999998899899999991524--20599999999999868998989499999989988
Q ss_pred EEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCEEEEECCCCCCCC
Q ss_conf 999951489998898611999999999999999999999999998791311124781898679--939998206632235
Q 000533 93 HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE--GLVKLADFGVATKLT 170 (1440)
Q Consensus 93 YLVMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsD--G~VKLiDFGLAr~L~ 170 (1440)
|||||||+||+|.+++... .+.+++..++.|++||+.||.|||+++|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 230 ~iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEEEEECCCCCHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCEEECC
T ss_conf 9998606999599999986-799999999999999999999999889230568765512147888978994066306856
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCCHHH
Q ss_conf 5776554556996445512231058886750365899999998299999999983589997624899---9999999789
Q 000533 171 EADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESLSPDI 247 (1440)
Q Consensus 171 es~~~s~t~vGTp~YmAPEVLks~~YS~KSDIWSLGVILYELLTGkpPF~g~s~~e~L~kIIk~~rp---plP~~ISeEL 247 (1440)
... .....+||+.|||||++.+..|+.++||||+||++|+|++|.+||.+.+..+.+.++...... ..+..+++++
T Consensus 309 ~~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 387 (573)
T 3uto_A 309 PKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG 387 (573)
T ss_dssp TTS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred CCC-CEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 998-2323477945149999689998969999999999999997879979869999999998489998953246899999
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHCCHHHHH
Q ss_conf 99999972310079999989960977999
Q 000533 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQN 276 (1440)
Q Consensus 248 kDLIkkLLqkDPekRPSAeEILkHPWLQe 276 (1440)
.+||.+||.+||.+||++.|+++||||+.
T Consensus 388 ~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 388 KDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred HHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 99999886489568929999953957487
No 10
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=438.04 Aligned_cols=258 Identities=26% Similarity=0.460 Sum_probs=225.6
Q ss_pred CCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCCCHH-HHHHH---HHHHHHHHHCCCCCCCEEEEEEEECCEE
Q ss_conf 8856798474114958999999967990999999315634888-89999---9999999817999821388899818969
Q 000533 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNII---MQEIDLLKNLNHKNIVKYLGSLKTRSHL 92 (1440)
Q Consensus 17 dgRYkILEkLGkGSFGtVYKArDk~TGk~VAIKIIkke~lseE-eie~L---lREIkILKrLkHPNIVKLldVfedd~~L 92 (1440)
-++|++++.||+|+||+||+|+++.+|+.||+|++.+...... ....+ ..++.+++.++|||||+++++|+++..+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEE
T ss_conf 68928888983164839999999999989999997578825255689999999999999648999871799999989988
Q ss_pred EEEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 99995148999889861199999999999999999999999999879131112478189867993999820663223557
Q 000533 93 HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEA 172 (1440)
Q Consensus 93 YLVMEYieGGSLsDLLKssk~gpLSEeqIlsILrQILsALeYLHSkGIVHRDIKPENILLdsDG~VKLiDFGLAr~L~es 172 (1440)
|||||||+||+|.++|... +.++|..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 268 ylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEEECCCCCCHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCCC
T ss_conf 9999468998299999866--99999999999999999999999788541688668759808998896456556663789
Q ss_pred CCCCCCCCCCCCCCCHHHHH-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 76554556996445512231-05888675036589999999829999999998--3589997624899999999978999
Q 000533 173 DVNTHSVVGTPYWMAPEVIE-MSGVCAASDIWSVGCTVIELLTCVPPYYELQP--MPALFRIVQDERPPIPESLSPDITD 249 (1440)
Q Consensus 173 ~~~s~t~vGTp~YmAPEVLk-s~~YS~KSDIWSLGVILYELLTGkpPF~g~s~--~e~L~kIIk~~rpplP~~ISeELkD 249 (1440)
...+.|||+.|||||++. +..|+.++|||||||++|+|++|.+||.+... ...+.+.+......+|..+|+++.+
T Consensus 346 --~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~d 423 (689)
T 3v5w_A 346 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 423 (689)
T ss_dssp --CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHH
T ss_pred --CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf --877765786731889984799999599999999999999868799999986779999985057988887669999999
Q ss_pred HHHHHHHHCCCCCCC-----HHHHHCCHHHHHHH
Q ss_conf 999972310079999-----98996097799999
Q 000533 250 FLRQCFKKDARQRPD-----AKTLLSHPWIQNCR 278 (1440)
Q Consensus 250 LIkkLLqkDPekRPS-----AeEILkHPWLQelr 278 (1440)
||.+||.+||.+|++ +.|+++||||+...
T Consensus 424 LI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 424 LLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp HHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred HHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 9999760898687999888999996691504789
Done!