BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000535
(1437 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 207 bits (526), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 157/258 (60%), Gaps = 9/258 (3%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
+++G+G+YG VYK + E G VAIKQV +E+ DL I++EI +++ + ++VKY
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYY 90
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
GS + L I++EY GS+++II+ NK E +A + L+GL YLH IH
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RDIK NIL EG KLADFGVA +LT+ + V+GTP+WMAPEVI+ G +DI
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 203 WSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFKKDAR 260
WS+G T IE+ PPY ++ PM A+F I + P PE S + TDF++QC K
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPE 268
Query: 261 QRPDAKTLLSHPWIQNCR 278
QR A LL HP++++ +
Sbjct: 269 QRATATQLLQHPFVRSAK 286
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 204 bits (519), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 152/251 (60%), Gaps = 4/251 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
D IGKG++G VYKG+D + VAIK + LE E +I QEI +L + I +Y
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYITRYF 83
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS + L II+EY+ GS +++KP GP E+ +A + ++L+GL YLH + IHR
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L +++G VKLADFGVA +LT+ + + VGTP+WMAPEVI+ S +DIW
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP +L PM LF I ++ P + S +F+ C KD R RP
Sbjct: 201 SLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRP 260
Query: 264 DAKTLLSHPWI 274
AK LL H +I
Sbjct: 261 TAKELLKHKFI 271
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 199 bits (507), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/258 (41%), Positives = 158/258 (61%), Gaps = 5/258 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IGKG++G V+KG+D VAIK + LE E I QEI +L + + KY
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYVTKYY 91
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS + L II+EY+ GS ++++P GP E+ +A + ++L+GL YLH + IHR
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L ++ G VKLADFGVA +LT+ + ++ VGTP+WMAPEVI+ S + +DIW
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 208
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP+ EL PM LF I ++ P + + S + +F+ C K+ RP
Sbjct: 209 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 268
Query: 264 DAKTLLSHPWI-QNCRRA 280
AK LL H +I +N ++
Sbjct: 269 TAKELLKHKFILRNAKKT 286
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 159/257 (61%), Gaps = 5/257 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IGKG++G V+KG+D VAIK + LE E +I QEI +L + + KY
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYY 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS + L II+EY+ GS ++++P GP E+ +A + ++L+GL YLH + IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L ++ G VKLADFGVA +LT+ + ++ VGTP+WMAPEVI+ S + +DIW
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP+ EL PM LF I ++ P + + S + +F+ C K+ RP
Sbjct: 189 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 248
Query: 264 DAKTLLSHPWI-QNCRR 279
AK LL H +I +N ++
Sbjct: 249 TAKELLKHKFILRNAKK 265
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 158/257 (61%), Gaps = 5/257 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IGKG++G V+KG+D VAIK + LE E +I QEI +L + + KY
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYY 86
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS + L II+EY+ GS ++++P GP E+ +A + ++L+GL YLH + IHR
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L ++ G VKLADFGVA +LT+ + + VGTP+WMAPEVI+ S + +DIW
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 203
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP+ EL PM LF I ++ P + + S + +F+ C K+ RP
Sbjct: 204 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 263
Query: 264 DAKTLLSHPWI-QNCRR 279
AK LL H +I +N ++
Sbjct: 264 TAKELLKHKFILRNAKK 280
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 158/257 (61%), Gaps = 5/257 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IGKG++G V+KG+D VAIK + LE E +I QEI +L + + KY
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYVTKYY 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS + L II+EY+ GS ++++P GP E+ +A + ++L+GL YLH + IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L ++ G VKLADFGVA +LT+ + + VGTP+WMAPEVI+ S + +DIW
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIW 188
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP+ EL PM LF I ++ P + + S + +F+ C K+ RP
Sbjct: 189 SLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRP 248
Query: 264 DAKTLLSHPWI-QNCRR 279
AK LL H +I +N ++
Sbjct: 249 TAKELLKHKFILRNAKK 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 197 bits (502), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 151/251 (60%), Gaps = 4/251 (1%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
+ IGKG++G V+KG+D VAIK + LE E +I QEI +L + + KY
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSSYVTKYY 87
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
GS S L II+EY+ GS ++++ GPF E +A + ++L+GL YLH + IHR
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHR 144
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
DIK AN+L +++G VKLADFGVA +LT+ + ++ VGTP+WMAPEVI+ S + +DIW
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIW 204
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
S+G T IEL PP ++ PM LF I ++ P + + +F+ C KD RP
Sbjct: 205 SLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRP 264
Query: 264 DAKTLLSHPWI 274
AK LL H +I
Sbjct: 265 TAKELLKHKFI 275
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+GKG YG VY G DL N +AIK++ + + +EI L K+L HKNIV+YLGS
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEEIALHKHLKHKNIVQYLGS 87
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFP--ESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ I +E V GSL+ +++ +K+GP E + Y Q+LEGL YLH+ ++HR
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 144 DIKGANIL-TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS--GVCAAS 200
DIKG N+L T G++K++DFG + +L + T + GT +MAPE+I+ G A+
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 206
Query: 201 DIWSVGCTVIELLTCVPPYYEL-QPMPALFRI-VQDERPPIPESLSPDITDFLRQCFKKD 258
DIWS+GCT+IE+ T PP+YEL +P A+F++ + P IPES+S + F+ +CF+ D
Sbjct: 207 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 266
Query: 259 ARQRPDAKTLL 269
+R A LL
Sbjct: 267 PDKRACANDLL 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 154/251 (61%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+GKG YG VY G DL N +AIK++ + + +EI L K+L HKNIV+YLGS
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS--QPLHEEIALHKHLKHKNIVQYLGS 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFP--ESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ I +E V GSL+ +++ +K+GP E + Y Q+LEGL YLH+ ++HR
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 144 DIKGANIL-TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS--GVCAAS 200
DIKG N+L T G++K++DFG + +L + T + GT +MAPE+I+ G A+
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAA 192
Query: 201 DIWSVGCTVIELLTCVPPYYEL-QPMPALFRI-VQDERPPIPESLSPDITDFLRQCFKKD 258
DIWS+GCT+IE+ T PP+YEL +P A+F++ + P IPES+S + F+ +CF+ D
Sbjct: 193 DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPD 252
Query: 259 ARQRPDAKTLL 269
+R A LL
Sbjct: 253 PDKRACANDLL 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 18/261 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G GA+G+VYK + E A K + + ++E+L M EID+L + +H NIVK L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ ++L I++E+ G++ ++ + P ES + V Q L+ L YLH+ +IHRD
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS---- 200
+K NIL T +G +KLADFGV+ K T S +GTPYWMAPEV+ +C S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVV----MCETSKDRP 216
Query: 201 -----DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQ 253
D+WS+G T+IE+ PP++EL PM L +I + E P + P S + DFL++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 254 CFKKDARQRPDAKTLLSHPWI 274
C +K+ R LL HP++
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 18/261 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G GA+G+VYK + E A K + + ++E+L M EID+L + +H NIVK L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ ++L I++E+ G++ ++ + P ES + V Q L+ L YLH+ +IHRD
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS---- 200
+K NIL T +G +KLADFGV+ K T S +GTPYWMAPEV+ +C S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVV----MCETSKDRP 216
Query: 201 -----DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQ 253
D+WS+G T+IE+ PP++EL PM L +I + E P + P S + DFL++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 254 CFKKDARQRPDAKTLLSHPWI 274
C +K+ R LL HP++
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 148/261 (56%), Gaps = 18/261 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G GA+G+VYK + E A K + + ++E+L M EID+L + +H NIVK L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ ++L I++E+ G++ ++ + P ES + V Q L+ L YLH+ +IHRD
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS---- 200
+K NIL T +G +KLADFGV+ K T +GTPYWMAPEV+ +C S
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVV----MCETSKDRP 216
Query: 201 -----DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQ 253
D+WS+G T+IE+ PP++EL PM L +I + E P + P S + DFL++
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
Query: 254 CFKKDARQRPDAKTLLSHPWI 274
C +K+ R LL HP++
Sbjct: 277 CLEKNVDARWTTSQLLQHPFV 297
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 143/259 (55%), Gaps = 7/259 (2%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+GA G VY +D+ G VAI+Q++L+ +++L I+ EI +++ + N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV YL S L +++EY+ GSL +++ E +A + L+ L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN 135
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK NIL +G VKL DFG ++T ++VGTPYWMAPEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
DIWS+G IE++ PPY P+ AL+ I + P + PE LS DFL +C
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255
Query: 257 KDARQRPDAKTLLSHPWIQ 275
D +R AK LL H +++
Sbjct: 256 MDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 143/259 (55%), Gaps = 7/259 (2%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+GA G VY +D+ G VAI+Q++L+ +++L I+ EI +++ + N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV YL S L +++EY+ GSL +++ E +A + L+ L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN 135
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK NIL +G VKL DFG ++T +VGTPYWMAPEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
DIWS+G IE++ PPY P+ AL+ I + P + PE LS DFL +C +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 255
Query: 257 KDARQRPDAKTLLSHPWIQ 275
D +R AK LL H +++
Sbjct: 256 MDVEKRGSAKELLQHQFLK 274
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 150/270 (55%), Gaps = 16/270 (5%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL-NHKN 78
+ L + +G G YG+VYKG ++ G AIK + + +E+ I QEI++LK +H+N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE---IKQEINMLKKYSHHRN 82
Query: 79 IVKYLGSLKTRS------HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
I Y G+ ++ L +++E+ GS+ ++IK K E +A ++L GL
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
+LH+ VIHRDIKG N+L T+ VKL DFGV+ +L ++ +GTPYWMAPEVI
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 193 MSGVCAA-----SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-ESLSPD 246
A SD+WS+G T IE+ PP ++ PM ALF I ++ P + + S
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKK 262
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
F+ C K+ QRP + L+ HP+I++
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 142/259 (54%), Gaps = 7/259 (2%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+GA G VY +D+ G VAI+Q++L+ +++L I+ EI +++ + N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 78
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV YL S L +++EY+ GSL +++ E +A + L+ L +LH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN 135
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK NIL +G VKL DFG ++T +VGTPYWMAPEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
DIWS+G IE++ PPY P+ AL+ I + P + PE LS DFL +C
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255
Query: 257 KDARQRPDAKTLLSHPWIQ 275
D +R AK LL H +++
Sbjct: 256 MDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 143/259 (55%), Gaps = 7/259 (2%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+GA G VY +D+ G VAI+Q++L+ +++L I+ EI +++ + N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 79
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV YL S L +++EY+ GSL +++ E +A + L+ L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK NIL +G VKL DFG ++T +VGTPYWMAPEV+
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
DIWS+G IE++ PPY P+ AL+ I + P + PE LS DFL +C +
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 256
Query: 257 KDARQRPDAKTLLSHPWIQ 275
D +R AK L+ H +++
Sbjct: 257 MDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 144/259 (55%), Gaps = 7/259 (2%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+GA G VY +D+ G VAI+Q++L+ +++L I+ EI +++ + N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPN 79
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV YL S L +++EY+ GSL +++ E +A + L+ L +LH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD---EGQIAAVCRECLQALEFLHSN 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHR+IK NIL +G VKL DFG ++T ++VGTPYWMAPEV+
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
DIWS+G IE++ PPY P+ AL+ I + P + PE LS DFL +C +
Sbjct: 197 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 256
Query: 257 KDARQRPDAKTLLSHPWIQ 275
D +R AK L+ H +++
Sbjct: 257 MDVEKRGSAKELIQHQFLK 275
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 146/258 (56%), Gaps = 19/258 (7%)
Query: 29 GAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKT 88
G +G+VYK + E A K + + ++E+L M EID+L + +H NIVK L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 89 RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGA 148
++L I++E+ G++ ++ + P ES + V Q L+ L YLH+ +IHRD+K
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 149 NILTTKEGLVKLADFGVATKLTEADVNTH-SVVGTPYWMAPEVIEMSGVCAAS------- 200
NIL T +G +KLADFGV+ K T + S +GTPYWMAPEV+ +C S
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV----MCETSKDRPYDY 193
Query: 201 --DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQCFK 256
D+WS+G T+IE+ PP++EL PM L +I + E P + P S + DFL++C +
Sbjct: 194 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLE 253
Query: 257 KDARQRPDAKTLLSHPWI 274
K+ R LL HP++
Sbjct: 254 KNVDARWTTSQLLQHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 18/263 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G GA+G+VYK + E G A K + E ++E+L + EI++L +H IVK LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ L I++E+ G++ I+ G E + V Q+LE L +LH + +IHRD
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA----- 199
+K N+L T EG ++LADFGV+ K + S +GTPYWMAPEV+ +C
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV----MCETMKDTP 198
Query: 200 ----SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQ 253
+DIWS+G T+IE+ PP++EL PM L +I + + P + P S + DFL+
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKI 258
Query: 254 CFKKDARQRPDAKTLLSHPWIQN 276
K+ RP A LL HP++ +
Sbjct: 259 ALDKNPETRPSAAQLLEHPFVSS 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 146/263 (55%), Gaps = 18/263 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G GA+G+VYK + E G A K + E ++E+L + EI++L +H IVK LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVI--ETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ L I++E+ G++ I+ G E + V Q+LE L +LH + +IHRD
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA----- 199
+K N+L T EG ++LADFGV+ K + S +GTPYWMAPEV+ +C
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVV----MCETMKDTP 190
Query: 200 ----SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPI--PESLSPDITDFLRQ 253
+DIWS+G T+IE+ PP++EL PM L +I + + P + P S + DFL+
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKI 250
Query: 254 CFKKDARQRPDAKTLLSHPWIQN 276
K+ RP A LL HP++ +
Sbjct: 251 ALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 22/280 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L + IG GA V + VAIK+++LE Q ++ +++EI + +H NI
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK------PNKFGPFPESLVAVYIAQVLEGLV 133
V Y S + L ++++ + GS+ +IIK +K G ES +A + +VLEGL
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSV----VGTPYWMAP 188
YLH+ G IHRD+K NIL ++G V++ADFGV+ L T D+ + V VGTP WMAP
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 189 EVIE-MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP------- 240
EV+E + G +DIWS G T IEL T PY++ PM L +Q++ P +
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKE 255
Query: 241 --ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCR 278
+ + C +KD +RP A LL H + Q +
Sbjct: 256 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 148/280 (52%), Gaps = 22/280 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L + IG GA V + VAIK+++LE Q ++ +++EI + +H NI
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNI 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK------PNKFGPFPESLVAVYIAQVLEGLV 133
V Y S + L ++++ + GS+ +IIK +K G ES +A + +VLEGL
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSV----VGTPYWMAP 188
YLH+ G IHRD+K NIL ++G V++ADFGV+ L T D+ + V VGTP WMAP
Sbjct: 131 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 189 EVIE-MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP------- 240
EV+E + G +DIWS G T IEL T PY++ PM L +Q++ P +
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKE 250
Query: 241 --ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCR 278
+ + C +KD +RP A LL H + Q +
Sbjct: 251 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 163 bits (412), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 143/252 (56%), Gaps = 7/252 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V + +G VA+K + L Q+ ++ E+ ++++ H N+V+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E+++ G+L +I+ + E +A VL+ L YLH QGVIHRD
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLN---EEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPEVI S DIWS
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES--LSPDITDFLRQCFKKDARQR 262
+G VIE++ PPY+ P+ A+ R+ P + S +SP + DFL + +D ++R
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
Query: 263 PDAKTLLSHPWI 274
A+ LL HP++
Sbjct: 287 ATAQELLDHPFL 298
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 140/255 (54%), Gaps = 11/255 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYL 83
EIG G++G VY D+ N + VAIK++S + E I++E+ L+ L H N ++Y
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
G +++EY GS +++++ +K P E +A L+GL YLH +IHR
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---EMSGVCAAS 200
D+K NIL ++ GLVKL DFG A+ + A+ VGTPYWMAPEVI +
Sbjct: 179 DVKAGNILLSEPGLVKLGDFGSASIMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES-LSPDITDFLRQCFKKDA 259
D+WS+G T IEL PP + + M AL+ I Q+E P + S +F+ C +K
Sbjct: 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 294
Query: 260 RQRPDAKTLLSHPWI 274
+ RP ++ LL H ++
Sbjct: 295 QDRPTSEVLLKHRFV 309
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 140/255 (54%), Gaps = 11/255 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYL 83
EIG G++G VY D+ N + VAIK++S + E I++E+ L+ L H N ++Y
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
G +++EY GS +++++ +K P E +A L+GL YLH +IHR
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---EMSGVCAAS 200
D+K NIL ++ GLVKL DFG A+ + A+ VGTPYWMAPEVI +
Sbjct: 140 DVKAGNILLSEPGLVKLGDFGSASIMAPAN----XFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES-LSPDITDFLRQCFKKDA 259
D+WS+G T IEL PP + + M AL+ I Q+E P + S +F+ C +K
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 255
Query: 260 RQRPDAKTLLSHPWI 274
+ RP ++ LL H ++
Sbjct: 256 QDRPTSEVLLKHRFV 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 272
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 391
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 392 RATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 195
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 314
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 315 RATAAELLKHPFL 327
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 160 bits (406), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 152
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 271
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 272 RATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 160 bits (405), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 150
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 269
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 270 RATAAELLKHPFL 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 160 bits (404), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 145
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 264
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 265 RATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 160 bits (404), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 9/253 (3%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V +G VA+K++ L Q+ ++ E+ ++++ H+N+V+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E + AV +A VL+ L LH QGVIHRD
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNE--EQIAAVCLA-VLQALSVLHAQGVIHRD 141
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G VKL+DFG ++++ +VGTPYWMAPE+I DIWS
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ ++++D PP ++L SP + FL + +D Q
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQ 260
Query: 262 RPDAKTLLSHPWI 274
R A LL HP++
Sbjct: 261 RATAAELLKHPFL 273
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 159 bits (403), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 7/257 (2%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKN 73
TL N + + +IG+G + VY+ L +G VA+K+V + ++ ++EIDLLK
Sbjct: 30 TLAN-FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEG 131
LNH N++KY S + L+I+LE + G L+ +IK K PE V Y Q+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 132 LVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
L ++H + V+HRDIK AN+ T G+VKL D G+ + HS+VGTPY+M+PE I
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYY--ELQPMPALFRIVQDERPPIP-ESLSPDIT 248
+G SDIWS+GC + E+ P+Y ++ +I Q + PP+P + S ++
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 249 DFLRQCFKKDARQRPDA 265
+ C D +RPD
Sbjct: 269 QLVNMCINPDPEKRPDV 285
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 145/271 (53%), Gaps = 14/271 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+IG+G+ G V + G VA+K++ L Q+ ++ E+ ++++ +H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S L +++E++E G+L +I+ + E +A VL L YLH QGVIHRD
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK +IL T +G +KL+DFG ++++ +VGTPYWMAPEVI DIWS
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL---SPDITDFLRQCFKKDARQ 261
+G VIE++ PPY+ P+ A+ RI +D PP + L S + FL ++ Q
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQ 285
Query: 262 RPDAKTLLSHPWIQ-----NCRRALQSSLRH 287
R A+ LL HP+++ +C L RH
Sbjct: 286 RATAQELLGHPFLKLAGPPSCIVPLMRQYRH 316
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 139/257 (54%), Gaps = 2/257 (0%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY+ +IG+G++G+ E+G IK++++ ++ ++ +E+ +L N+ H N
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV+Y S + L+I+++Y E G L I K F E + + Q+ L ++H++
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRDIK NI TK+G V+L DFG+A L + +GTPY+++PE+ E
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPAL-FRIVQDERPPIPESLSPDITDFLRQCFKK 257
SDIW++GC + EL T + +E M L +I+ PP+ S D+ + Q FK+
Sbjct: 205 KSDIWALGCVLYELCT-LKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKR 263
Query: 258 DARQRPDAKTLLSHPWI 274
+ R RP ++L +I
Sbjct: 264 NPRDRPSVNSILEKGFI 280
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 140/256 (54%), Gaps = 3/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEIDLLKNLNHKN 78
+ +G+ +GKG++ VY+ + G VAIK + + + + + + E+ + L H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I++ + ++++++LE NG + +K N+ PF E+ ++ Q++ G++YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLK-NRVKPFSENEARHFMHQIITGMLYLHSH 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
G++HRD+ +N+L T+ +K+ADFG+AT+L +++ GTP +++PE+ S
Sbjct: 132 GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS+GC LL PP+ L ++V + +P LS + D + Q +++
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY-EMPSFLSIEAKDLIHQLLRRN 250
Query: 259 ARQRPDAKTLLSHPWI 274
R ++L HP++
Sbjct: 251 PADRLSLSSVLDHPFM 266
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E+V L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVD 193
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 135 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 193
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 253
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 141/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E+V+ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 128 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ + L + + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 141/286 (49%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ + L + + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 129 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 32/288 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 130 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 248
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRAL 281
D + L Q D +R AK L+HP+ Q+ + +
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 32/283 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQN 276
D + L Q D +R AK L+HP+ Q+
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 132 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 250
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+ ++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 128 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 246
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+ ++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A TH VV T ++ APE+ + A D
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ + L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 70 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 129 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 247
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 32/286 (11%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++IG+G YG VYK + G+ VA+K++ L+ + + ++EI LLK LNH NIVK L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ T + L+++ E++ + L + + P L+ Y+ Q+L+GL + H V+HR
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASD 201
D+K N+L EG +KLADFG+A H VV T ++ APE+ + A D
Sbjct: 131 DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 202 IWSVGCTVIELLT---CVPPYYELQPMPALFRIV--------------QDERPPIPESLS 244
IWS+GC E++T P E+ + +FR + D +P P+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 249
Query: 245 PDIT-----------DFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + L Q D +R AK L+HP+ Q+ +
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 12/260 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G+V+K + G +A+KQ+ +E+ I+M +LK+ + IV+ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ T + + I +E + G+ A +K GP PE ++ +++ L YL E+ GVIHR
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA---- 199
D+K +NIL + G +KL DFG++ +L + S G +MAPE I+
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS-AGCAAYMAPERIDPPDPTKPDYDI 208
Query: 200 -SDIWSVGCTVIELLTCVPPYYELQP-MPALFRIVQDERPPIPE--SLSPDITDFLRQCF 255
+D+WS+G +++EL T PY + L +++Q+E P +P S D F++ C
Sbjct: 209 RADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCL 268
Query: 256 KKDARQRPDAKTLLSHPWIQ 275
KD R+RP LL H +I+
Sbjct: 269 TKDHRKRPKYNKLLEHSFIK 288
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 130 bits (326), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 133/268 (49%), Gaps = 12/268 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T +Y + +GKG++G V K D A+K ++ + +D + I++E++LLK L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLV 133
+H NI+K L+ S +I+ E G L + IIK +F E A I QV G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS---EHDAARIIKQVFSGIT 135
Query: 134 YLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
Y+H+ ++HRD+K NIL K+ +K+ DFG++T + + +GT Y++APEV
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV 194
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESLSPDI 247
+ D+WS G + LL+ PP+Y L R+ + P ++S D
Sbjct: 195 LR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
D +R+ R A L HPWIQ
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IG G+YGR K +G + K++ ++ + + +++ E++LL+ L H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 86 L--KTRSHLHIILEYVENGSLANII----KPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+ +T + L+I++EY E G LA++I K ++ E V + Q+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHRRS 131
Query: 140 -----VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
V+HRD+K AN+ + VKL DFG+A L + VGTPY+M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
SDIWS+GC + EL +PP+ +I + + IP S ++ + + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM 251
Query: 255 FKKDARQRPDAKTLLSHPWI 274
RP + +L +P I
Sbjct: 252 LNLKDYHRPSVEEILENPLI 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IG G+YGR K +G + K++ ++ + + +++ E++LL+ L H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 86 L--KTRSHLHIILEYVENGSLANII----KPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+ +T + L+I++EY E G LA++I K ++ E V + Q+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHRRS 131
Query: 140 -----VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
V+HRD+K AN+ + VKL DFG+A L + VGTPY+M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
SDIWS+GC + EL +PP+ +I + + IP S ++ + + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM 251
Query: 255 FKKDARQRPDAKTLLSHPWI 274
RP + +L +P I
Sbjct: 252 LNLKDYHRPSVEEILENPLI 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 13/260 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IG G+YGR K +G + K++ ++ + + +++ E++LL+ L H NIV+Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 86 L--KTRSHLHIILEYVENGSLANII----KPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+ +T + L+I++EY E G LA++I K ++ E V + Q+ L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY--LDEEFVLRVMTQLTLALKECHRRS 131
Query: 140 -----VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
V+HRD+K AN+ + VKL DFG+A L + VGTPY+M+PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
SDIWS+GC + EL +PP+ +I + + IP S ++ + + +
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRM 251
Query: 255 FKKDARQRPDAKTLLSHPWI 274
RP + +L +P I
Sbjct: 252 LNLKDYHRPSVEEILENPLI 271
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 139/257 (54%), Gaps = 11/257 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ + SDIW
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFR----IVQDERPPIPESL-SPDITDFLRQCFKKD 258
S+G +++E+ P A+F IV + P +P + S + DF+ +C K+
Sbjct: 207 SMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 266
Query: 259 ARQRPDAKTLLSHPWIQ 275
+R D K L+ H +I+
Sbjct: 267 PAERADLKQLMVHAFIK 283
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +K+ADFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T +Y + +GKG++G V K D A+K ++ + +D + I++E++LLK L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLV 133
+H NI+K L+ S +I+ E G L + IIK +F E A I QV G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS---EHDAARIIKQVFSGIT 135
Query: 134 YLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
Y+H+ ++HRD+K NIL K+ +K+ DFG++T + + +GT Y++APEV
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV 194
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESLSPDI 247
+ + D+WS G + LL+ PP+Y L R+ + P ++S D
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
D +R+ R A L HPWIQ
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 12/269 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T +Y + +GKG++G V K D A+K ++ + +D + I++E++LLK L
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLV 133
+H NI+K L+ S +I+ E G L + IIK +F E A I QV G+
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFS---EHDAARIIKQVFSGIT 135
Query: 134 YLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
Y+H+ ++HRD+K NIL K+ +K+ DFG++T + + +GT Y++APEV
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRIGTAYYIAPEV 194
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESLSPDI 247
+ + D+WS G + LL+ PP+Y L R+ + P ++S D
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
D +R+ R A L HPWIQ
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 137/253 (54%), Gaps = 7/253 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L + N VGT +M+PE ++ + SDIW
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPERLQGTHYSVQSDIW 190
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL-SPDITDFLRQCFKKDARQR 262
S+G +++E+ P + L IV + P +P ++ S + DF+ +C K+ +R
Sbjct: 191 SMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
Query: 263 PDAKTLLSHPWIQ 275
D K L+ H +I+
Sbjct: 251 ADLKQLMVHAFIK 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 147/271 (54%), Gaps = 17/271 (6%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D+ + E+G G G V+K +G +A K + LE I N I++E+ +L N
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
IV + G+ + + I +E+++ GSL ++K K G PE ++ V++GL YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 137 EQ-GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
E+ ++HRD+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ +
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTH 179
Query: 196 VCAASDIWSVGCTVIELLTC---VPP---YYELQPMPALFR----IVQDERPPIPESL-S 244
SDIWS+G +++E+ +PP + +P A+F IV + P +P + S
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS 239
Query: 245 PDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ DF+ +C K+ +R D K L+ H +I+
Sbjct: 240 LEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 44/291 (15%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
+++G G Y VYKGL+ G +VA+K+V L++ + + ++EI L+K L H+NIV+
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLY 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPE----SLVAVYIAQVLEGLVYLHEQG 139
+ T + L ++ E+++N L + G P +LV + Q+L+GL + HE
Sbjct: 70 DVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV-VGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L K G +KL DFG+A VNT S V T ++ AP+V+ S +
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFG-IPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 199 AS-DIWSVGCTVIELLTCVP--------------------PYYELQP----MPALFRIVQ 233
S DIWS GC + E++T P P L P +P +Q
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQ 247
Query: 234 DERPP----------IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
+RPP E L ++ DFL + + R AK L HPW
Sbjct: 248 -QRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY+ G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +K+ADFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY+ G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +K+ADFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ +S VGT +++PE++
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 271
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 272 LDATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T ++ GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVSIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 13/261 (4%)
Query: 26 IGKGAYGRVY---KGLDLENGDFVAIKQVSLENIAQ--EDLNIIMQEIDLLKNLNHKNIV 80
+GKG YG+V+ K G A+K + I + +D E ++L+ + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ + +T L++ILEY+ G L ++ + G F E Y+A++ L +LH++G+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS 200
I+RD+K NI+ +G VKL DFG+ + TH+ GT +MAPE++ SG A
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAV 202
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
D WS+G + ++LT PP+ + +I++ + +P L+ + D L++ K++A
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KLNLPPYLTQEARDLLKKLLKRNAA 261
Query: 261 QR-----PDAKTLLSHPWIQN 276
R DA + +HP+ ++
Sbjct: 262 SRLGAGPGDAGEVQAHPFFRH 282
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ +S VGT +++PE++
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 267
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 268 LDATKRLGCEEMEGYGPLKAHPFFES 293
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 136/258 (52%), Gaps = 8/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L + IG G + +V + G+ VAIK + +N DL I EI+ LKNL H++I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMD-KNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
+ L+T + + ++LEY G L + II ++ E V Q++ + Y+H Q
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLS---EEETRVVFRQIVSAVAYVHSQ 127
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIE-MSGV 196
G HRD+K N+L + +KL DFG+ K D + + G+ + APE+I+ S +
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
+ +D+WS+G + L+ P+ + M AL++ + + +P+ LSP L+Q +
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMRGKYDVPKWLSPSSILLLQQMLQ 246
Query: 257 KDARQRPDAKTLLSHPWI 274
D ++R K LL+HPWI
Sbjct: 247 VDPKKRISMKNLLNHPWI 264
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ ++ VGT +++PE++
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 268
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T ++ GTP ++APE+I G A D W+
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWTLCGTPEYLAPEIILSKGYNKAVDWWA 209
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 210 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 268
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 269 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVSIN 326
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 327 EKCGKEFS 334
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 123 bits (309), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 128/238 (53%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ A T ++ GTP ++APE+I G A D W+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGA---TWTLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + +++ + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG+A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 144/280 (51%), Gaps = 12/280 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
++ ++Y L ++IGKGA+ V + + L G A K ++ + ++ D + +E + + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVY 134
H NIV+ S+ +++ + V G L I ++ + E+ + I Q+LE +++
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLH 118
Query: 135 LHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
H+ GV+HRD+K N+L K VKLADFG+A ++ GTP +++PEV+
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDI 247
DIW+ G + LL PP+++ + L++ ++ D P ++++P+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
+ + Q + +R A L HPW+ C+R+ +S+ H
Sbjct: 238 KNLINQMLTINPAKRITAHEALKHPWV--CQRSTVASMMH 275
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 123 bits (308), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 41/321 (12%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGD-FVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
D +Y EIG+GAYG+V+K DL+NG FVA+K+V ++ +E + + ++E+ +L++L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHL 68
Query: 75 N---HKNIVKYLGSLKT-----RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
H N+V+ + L ++ E+V+ + K + G P + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMF 127
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
Q+L GL +LH V+HRD+K NIL T G +KLADFG+A ++ + SVV T ++
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYR 186
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-------QDERP-- 237
APEV+ S D+WSVGC E+ P + + L +I+ +++ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 238 --------------PIPESLSPDI----TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
PI E DI D L +C + +R A + LSHP+ Q+ R
Sbjct: 247 VALPRQAFHSKSAQPI-EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Query: 280 ALQSSLRHSGTMRNVEENGSA 300
++ H +N E +A
Sbjct: 306 CKENLDSHLPPSQNTSELNTA 326
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 13/261 (4%)
Query: 26 IGKGAYGRVY---KGLDLENGDFVAIKQVSLENIAQ--EDLNIIMQEIDLLKNLNHKNIV 80
+GKG YG+V+ K G A+K + I + +D E ++L+ + H IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ + +T L++ILEY+ G L ++ + G F E Y+A++ L +LH++G+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS 200
I+RD+K NI+ +G VKL DFG+ + TH GT +MAPE++ SG A
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAV 202
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
D WS+G + ++LT PP+ + +I++ + +P L+ + D L++ K++A
Sbjct: 203 DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-KLNLPPYLTQEARDLLKKLLKRNAA 261
Query: 261 QR-----PDAKTLLSHPWIQN 276
R DA + +HP+ ++
Sbjct: 262 SRLGAGPGDAGEVQAHPFFRH 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 268
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 268
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 271
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 272 LDATKRLGCEEMEGYGPLKAHPFFES 297
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 10/277 (3%)
Query: 4 QTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI 63
++++S +++ + + + +G GA+ V + G A+K + + + ++ +I
Sbjct: 8 ESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSI 67
Query: 64 IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
EI +L+ + H+NIV ++ +HL+++++ V G L + I F + E +
Sbjct: 68 -ENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDAST 124
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVV 180
I QVL+ + YLH G++HRD+K N+L +E + ++DFG++ + DV + +
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMS-TAC 183
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER---P 237
GTP ++APEV+ A D WS+G LL PP+Y+ +I++ E
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
P + +S DF+R +KD +R + HPWI
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 137/260 (52%), Gaps = 13/260 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDL-LKNLNHKNIVKYL 83
E+G+GAYG V K + +G +A+K++ +QE ++M ++D+ ++ ++ V +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM-DLDISMRTVDCPFTVTFY 116
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQ-GV 140
G+L + I +E ++ SL K +K PE ++ +++ L +LH + V
Sbjct: 117 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI----EMSGV 196
IHRD+K +N+L G VK+ DFG++ L ++ T PY MAPE I G
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPY-MAPERINPELNQKGY 234
Query: 197 CAASDIWSVGCTVIELLTCVPPYYEL-QPMPALFRIVQDERPPIP-ESLSPDITDFLRQC 254
SDIWS+G T+IEL PY P L ++V++ P +P + S + DF QC
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC 294
Query: 255 FKKDARQRPDAKTLLSHPWI 274
KK++++RP L+ HP+
Sbjct: 295 LKKNSKERPTYPELMQHPFF 314
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+ ++IG G++G V++ +G VA+K + ++ E +N ++E+ ++K L H NIV
Sbjct: 41 IKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 82 YLGSLKTRSHLHIILEYVENGSLANII-KPNKFGPFPESLVAVYIAQVLEGLVYLHEQG- 139
++G++ +L I+ EY+ GSL ++ K E V +G+ YLH +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 140 -VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HR++K N+L K+ VK+ DFG++ +++ S GTP WMAPEV+
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRI-VQDERPPIPESLSPDITDFLRQCFKK 257
SD++S G + EL T P+ L P + + + +R IP +L+P + + C+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 258 DARQRPDAKTLL 269
+ +RP T++
Sbjct: 279 EPWKRPSFATIM 290
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 245
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 246 LDATKRLGCEEMEGYGPLKAHPFFES 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 248
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 249 LDATKRLGCEEMEGYGPLKAHPFFES 274
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 246
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 247 LDATKRLGCEEMEGYGPLKAHPFFES 272
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 247
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 248 LDATKRLGCEEMEGYGPLKAHPFFES 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 252
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 253 LDATKRLGCEEMEGYGPLKAHPFFES 278
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 17/270 (6%)
Query: 19 KYMLGD-----EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLK 72
KY L D +G G++GRV+ NG + A+K + E + + + + E +L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ H I++ G+ + + +I++Y+E G L ++++ ++ FP + Y A+V L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLAL 119
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
YLH + +I+RD+K NIL K G +K+ DFG A + + T+ + GTP ++APEV+
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TYXLCGTPDYIAPEVVS 176
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLR 252
+ D WS G + E+L P+Y+ M +I+ E P + D+ D L
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL-RFPPFFNEDVKDLLS 235
Query: 253 QCFKKDARQR-----PDAKTLLSHPWIQNC 277
+ +D QR + + +HPW +
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 275
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 276 LDATKRLGCEEMEGYGPLKAHPFFES 301
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 150/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + +++ + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +++ DFG+A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 43/292 (14%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE------------------ 59
N+Y L DEIGKG+YG V + + + A+K +S + + ++
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 60 ------DLNIIMQEIDLLKNLNHKNIVKYLGSLK--TRSHLHIILEYVENGSLANIIKPN 111
+ + QEI +LK L+H N+VK + L HL+++ E V G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---P 129
Query: 112 KFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTE 171
P E Y +++G+ YLH Q +IHRDIK +N+L ++G +K+ADFGV+ +
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 172 ADVNTHSVVGTPYWMAPEVIE-----MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMP 226
+D + VGTP +MAPE + SG A D+W++G T+ + P+ + + M
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSG--KALDVWAMGVTLYCFVFGQCPFMDERIM- 246
Query: 227 ALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS----HPWI 274
L ++ + P+ PDI + L+ + + P+++ ++ HPW+
Sbjct: 247 CLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 267
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 268 LDATKRLGCEEMEGYGPLKAHPFFES 293
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 20/274 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+D+ ++ ++G GA+G V+ + +G IK ++ ++ +Q + I EI++LK+L
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVPMEQIEAEIEVLKSL 77
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSL-ANIIKPNKFG-PFPESLVAVYIAQVLEGL 132
+H NI+K + +++I++E E G L I+ G E VA + Q++ L
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 133 VYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
Y H Q V+H+D+K NIL T+ +K+ DFG+A +L ++D ++ + GT +MAPE
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHSTNAAGTALYMAPE 196
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPY----YELQPMPALFR---IVQDERPPIPES 242
V + V DIWS G + LLT P+ E A ++ + RP
Sbjct: 197 VFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP----- 250
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
L+P D L+Q KD +RP A +L H W +
Sbjct: 251 LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVSIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVSIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 131/269 (48%), Gaps = 10/269 (3%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEID 69
H + Y+LGD +G G +G+V G G VA+K ++ + I D+ I +EI
Sbjct: 9 HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ 68
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LK H +I+K + T S + +++EYV G L + I N G E Q+L
Sbjct: 69 NLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQIL 126
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
G+ Y H V+HRD+K N+L K+ADFG++ +++ + S G+P + APE
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS-CGSPNYAAPE 185
Query: 190 VIEMSGVCAAS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPD 246
VI SG A DIWS G + LL P+ + +P LF+ + D P+ L+P
Sbjct: 186 VI--SGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYTPQYLNPS 242
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ L+ + D +R K + H W +
Sbjct: 243 VISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 131/252 (51%), Gaps = 6/252 (2%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+ ++IG G++G V++ +G VA+K + ++ E +N ++E+ ++K L H NIV
Sbjct: 41 IKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 82 YLGSLKTRSHLHIILEYVENGSLANII-KPNKFGPFPESLVAVYIAQVLEGLVYLHEQG- 139
++G++ +L I+ EY+ GSL ++ K E V +G+ YLH +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 140 -VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L K+ VK+ DFG++ + + GTP WMAPEV+
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRI-VQDERPPIPESLSPDITDFLRQCFKK 257
SD++S G + EL T P+ L P + + + +R IP +L+P + + C+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTN 278
Query: 258 DARQRPDAKTLL 269
+ +RP T++
Sbjct: 279 EPWKRPSFATIM 290
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLAGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 275
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 333
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 334 EKCGKEFS 341
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 361
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 362 EKCGKEFS 369
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 268
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 269 LDATKRLGCEEMEGYGPLKAHPFFES 294
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 143/282 (50%), Gaps = 16/282 (5%)
Query: 4 QTTTSAFHKSKT--LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL 61
Q T F SK L Y ++G GAYG V D AIK + +++
Sbjct: 21 QATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN 80
Query: 62 NIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESL 120
+ +++E+ +LK L+H NI+K + + + ++++E + G L + II KF E
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFN---EVD 137
Query: 121 VAVYIAQVLEGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTH 177
AV I QVL G+ YLH+ ++HRD+K N+L K+ L+K+ DFG++ + E
Sbjct: 138 AAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA-VFENQKKMK 196
Query: 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER- 236
+GT Y++APEV+ D+WS+G + LL PP+ Q + R V+ +
Sbjct: 197 ERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG-QTDQEILRKVEKGKY 254
Query: 237 ---PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P +++S D ++Q + D+++R A+ L HPWI+
Sbjct: 255 TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 216
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 217 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 275
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 333
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 334 EKCGKEFS 341
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 244
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 245 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 303
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIAVSIN 361
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 362 EKCGKEFT 369
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 20/306 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQSSL--RHSGTMRNVEENGSADAEIPSEDNQS 311
+ K + WI +R +++ + G + + EI N+
Sbjct: 283 NLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEEIRVXINEK 342
Query: 312 AGESLS 317
G+ +
Sbjct: 343 CGKEFT 348
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLXGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
C +SD+W++GC + +L+ +PP+ +I++ E P + P D + +
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPAAFFPKARDLVEKLLV 273
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 274 LDATKRLGCEEMEGYGPLKAHPFFES 299
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 137/273 (50%), Gaps = 16/273 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE------NIAQEDLNIIMQEID 69
++ Y L + IGKGA+ V + ++ E G A+K V + ++ EDL +E
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REAS 78
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLA-NIIKPNKFG-PFPESLVAVYIAQ 127
+ L H +IV+ L + + L+++ E+++ L I+K G + E++ + Y+ Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 128 VLEGLVYLHEQGVIHRDIKGANIL-TTKE--GLVKLADFGVATKLTEADVNTHSVVGTPY 184
+LE L Y H+ +IHRD+K N+L +KE VKL DFGVA +L E+ + VGTP+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQP--MPALFRIVQDERPPIPES 242
+MAPEV++ D+W G + LL+ P+Y + + + P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+S D +R+ D +R L+HPW++
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 341 EKCGKEFS 348
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E + + +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L+++LEY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +K+ADFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N + K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 218
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 219 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 277
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 278 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 335
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 336 EKCGKEFT 343
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N + K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 41/301 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGD-FVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
D +Y EIG+GAYG+V+K DL+NG FVA+K+V ++ +E + + ++E+ +L++L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHL 68
Query: 75 N---HKNIVKYLGSLKT-----RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
H N+V+ + L ++ E+V+ + K + G P + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMF 127
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
Q+L GL +LH V+HRD+K NIL T G +KLADFG+A ++ + SVV T ++
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYR 186
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-------QDERP-- 237
APEV+ S D+WSVGC E+ P + + L +I+ +++ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 238 --------------PIPESLSPDI----TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
PI E DI D L +C + +R A + LSHP+ Q+ R
Sbjct: 247 VALPRQAFHSKSAQPI-EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Query: 280 A 280
Sbjct: 306 C 306
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 210
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 211 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 269
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 270 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 327
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 328 EKCGKEFT 335
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 41/311 (13%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII----MQEIDLLKNL 74
KY +IG+G+YG V+K + + G VAIK+ + ED +I ++EI +LK L
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQL 59
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVY 134
H N+V L + + LH++ EY ++ L + + + PE LV Q L+ + +
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNF 117
Query: 135 LHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE-VIEM 193
H+ IHRD+K NIL TK ++KL DFG A LT V T ++ +PE ++
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 194 SGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI---VQDERP------------- 237
+ D+W++GC ELL+ VP + + L+ I + D P
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237
Query: 238 ----PIPESLSPDITDF----------LRQCFKKDARQRPDAKTLLSHPWIQNCRRALQS 283
P PE + P F L+ C D +R + LL HP+ +N R
Sbjct: 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDL 297
Query: 284 SLRHSGTMRNV 294
+ H N+
Sbjct: 298 AKEHDKPAENL 308
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 140/285 (49%), Gaps = 10/285 (3%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
S + Y + +E+GKGA+ V + + G A K ++ + ++ D + +E + +
Sbjct: 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 83
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L H NIV+ S++ S +++ + V G L I +F + E+ + I Q+LE +
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 141
Query: 133 VYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
Y H G++HR++K N+L K VKLADFG+A ++ +++ H GTP +++PE
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPE 200
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI---VQDERPPIPESLSPD 246
V++ DIW+ G + LL PP+++ +I D P ++++P+
Sbjct: 201 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 260
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + ++R A L PWI N R + S++ T+
Sbjct: 261 AKSLIDSMLTVNPKKRITADQALKVPWICN-RERVASAIHRQDTV 304
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV +E G+ A+K + + + + + + + E +L+ +N + K
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EY G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLR--RIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +K+ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 224
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 283
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 341
Query: 310 QSAGESLS 317
+ G+ S
Sbjct: 342 EKCGKEFS 349
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEID 69
H + ++Y +GKG++G V D G A+K +S + Q+ D +++E+
Sbjct: 42 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LLK L+H NI+K + + + +++ E G L + I K F E A I QVL
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVL 159
Query: 130 EGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
G+ Y+H+ ++HRD+K N+L +K+ +++ DFG++T EA +GT Y++
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYI 218
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESL 243
APEV+ + D+WS G + LL+ PP+ L ++ + + P + +
Sbjct: 219 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 277
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
S D +R+ R A+ L H WIQ
Sbjct: 278 SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEID 69
H + ++Y +GKG++G V D G A+K +S + Q+ D +++E+
Sbjct: 43 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LLK L+H NI+K + + + +++ E G L + I K F E A I QVL
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVL 160
Query: 130 EGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
G+ Y+H+ ++HRD+K N+L +K+ +++ DFG++T EA +GT Y++
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYI 219
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESL 243
APEV+ + D+WS G + LL+ PP+ L ++ + + P + +
Sbjct: 220 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 278
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
S D +R+ R A+ L H WIQ
Sbjct: 279 SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-------QEDLNIIMQ 66
K L ++Y++ +G GA G V + + VAIK +S A LN+
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ET 70
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 127
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 186
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 246
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 247 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 133/266 (50%), Gaps = 12/266 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ +S VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
+SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQN 276
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFES 296
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAIK +S A + D LN+
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ET 63
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 120
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 179
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 239
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 240 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAIK +S A + D LN+
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ET 64
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 121
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 180
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 143/280 (51%), Gaps = 12/280 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
++ ++Y L +E+GKGA+ V + + + G A K ++ + ++ D + +E + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVY 134
H NIV+ S+ +++ + V G L I ++ + E+ + I Q+LE + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESVNH 118
Query: 135 LHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
H G++HRD+K N+L +K VKLADFG+A ++ GTP +++PEV+
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDI 247
D+W+ G + LL PP+++ + L++ ++ D P ++++P+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
D + + + +R A L HPWI C+R+ +S+ H
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI--CQRSTVASMMH 275
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAIK +S A + D LN+
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ET 64
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 121
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 180
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAIK +S A + D LN+
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV-ET 64
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 121
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 180
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 241 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 2 SRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQ 58
S+Q + + L++ + +G +GKG +G VY + ++ +A+K + LE
Sbjct: 10 SKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 68
Query: 59 EDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPE 118
E + + +E+++ +L H NI++ G + +++ILEY G++ ++ K F E
Sbjct: 69 E--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDE 124
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
A YI ++ L Y H + VIHRDIK N+L G +K+ADFG + + T
Sbjct: 125 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-- 182
Query: 179 VVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP 238
+ GT ++ PE+IE D+WS+G E L PP +E ++ +
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFT 241
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
P+ ++ D + + K + QRP + +L HPWI
Sbjct: 242 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 135/271 (49%), Gaps = 10/271 (3%)
Query: 10 FHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID 69
+ +++ + + Y D +G GA+ V D VAIK ++ E + ++ + EI
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIA 68
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
+L + H NIV ++ HL++I++ V G L + I F + E + I QVL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVL 126
Query: 130 EGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
+ + YLH+ G++HRD+K N+L ++ + ++DFG+ +K+ + + GTP ++
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMEDPGSVLSTACGTPGYV 185
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER---PPIPESL 243
APEV+ A D WS+G LL PP+Y+ +I++ E P + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R +KD +R + L HPWI
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 72
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G + ++ K F E A YI ++ L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCH 130
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N++ ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIIISKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVSIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 126/238 (52%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + ++ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYQMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 137/260 (52%), Gaps = 13/260 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDL-LKNLNHKNIVKYL 83
E+G+GAYG V K + +G +A+K++ +QE ++M ++D+ ++ ++ V +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM-DLDISMRTVDCPFTVTFY 72
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQ-GV 140
G+L + I +E ++ SL K +K PE ++ +++ L +LH + V
Sbjct: 73 GALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI----EMSGV 196
IHRD+K +N+L G VK+ DFG++ L + DV G +MAPE I G
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVD-DVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 197 CAASDIWSVGCTVIELLTCVPPYYEL-QPMPALFRIVQDERPPIP-ESLSPDITDFLRQC 254
SDIWS+G T+IEL PY P L ++V++ P +P + S + DF QC
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC 250
Query: 255 FKKDARQRPDAKTLLSHPWI 274
KK++++RP L+ HP+
Sbjct: 251 LKKNSKERPTYPELMQHPFF 270
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 2 SRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQ 58
S+Q + + L++ + +G +GKG +G VY + ++ +A+K + LE
Sbjct: 19 SKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 77
Query: 59 EDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPE 118
E + + +E+++ +L H NI++ G + +++ILEY G++ ++ K F E
Sbjct: 78 E--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDE 133
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
A YI ++ L Y H + VIHRDIK N+L G +K+ADFG + + T
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-- 191
Query: 179 VVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP 238
+ GT ++ PE+IE D+WS+G E L PP +E ++ +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFT 250
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
P+ ++ D + + K + QRP + +L HPWI
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 72
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 130
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE IE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEXIEGRXH 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 248 HNPSQRPXLREVLEHPWI 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 135/271 (49%), Gaps = 10/271 (3%)
Query: 10 FHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID 69
+ +++ + + Y D +G GA+ V D VAIK ++ E + ++ + EI
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIA 68
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
+L + H NIV ++ HL++I++ V G L + I F + E + I QVL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVL 126
Query: 130 EGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
+ + YLH+ G++HRD+K N+L ++ + ++DFG+ +K+ + + GTP ++
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMEDPGSVLSTACGTPGYV 185
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER---PPIPESL 243
APEV+ A D WS+G LL PP+Y+ +I++ E P + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R +KD +R + L HPWI
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEID 69
H + ++Y +GKG++G V D G A+K +S + Q+ D +++E+
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LLK L+H NI+K + + + +++ E G L + I K F E A I QVL
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVL 136
Query: 130 EGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
G+ Y+H+ ++HRD+K N+L +K+ +++ DFG++T EA +GT Y++
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYI 195
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESL 243
APEV+ + D+WS G + LL+ PP+ L ++ + + P + +
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
S D +R+ R A+ L H WIQ
Sbjct: 255 SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 149/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ +P+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADEPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 5 TTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NI 63
T + K K + + +G +GKG +G VY + +N +A+K + + +E + +
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 64 IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
+ +EI++ +L H NI++ R ++++LE+ G L ++ K G F E A
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSAT 119
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP 183
++ ++ + L Y HE+ VIHRDIK N+L +G +K+ADFG + + + + GT
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTL 177
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL 243
++ PE+IE D+W G E L +PP+ RIV + P L
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFL 236
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ-NCRRAL 281
S D + + + QR K ++ HPW++ N RR L
Sbjct: 237 SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 275
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 5 TTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NI 63
T + K K + + +G +GKG +G VY + +N +A+K + + +E + +
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 64 IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
+ +EI++ +L H NI++ R ++++LE+ G L ++ K G F E A
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSAT 118
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP 183
++ ++ + L Y HE+ VIHRDIK N+L +G +K+ADFG + + + + GT
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTL 176
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL 243
++ PE+IE D+W G E L +PP+ RIV + P L
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFL 235
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ-NCRRAL 281
S D + + + QR K ++ HPW++ N RR L
Sbjct: 236 SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 274
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
+G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPN 73
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I++ G + +++ILEY G++ ++ K F E A YI ++ L Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSRFDEQRTATYITELANALSYCHSK 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK N+L G +K+ADFG + + +T + GT ++ PE+IE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT--LCGTLDYLPPEMIEGRMHDE 189
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G E L +PP +E +R + P+ ++ D + + K +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP-FEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 259 ARQRPDAKTLLSHPWIQ 275
A QR +L HPWI+
Sbjct: 249 ASQRLTLAEVLEHPWIK 265
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 135/271 (49%), Gaps = 10/271 (3%)
Query: 10 FHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID 69
+ +++ + + Y D +G GA+ V D VAIK ++ E + ++ + EI
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIA 68
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
+L + H NIV ++ HL++I++ V G L + I F + E + I QVL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVL 126
Query: 130 EGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
+ + YLH+ G++HRD+K N+L ++ + ++DFG+ +K+ + + GTP ++
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMEDPGSVLSTACGTPGYV 185
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER---PPIPESL 243
APEV+ A D WS+G LL PP+Y+ +I++ E P + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R +KD +R + L HPWI
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 128/240 (53%), Gaps = 6/240 (2%)
Query: 26 IGKGAYGRVY---KGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G+G++G+V+ K ++G A+K + + D E D+L ++NH +VK
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T L++IL+++ G L + +K F E V Y+A++ GL +LH G+I+
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIY 153
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K NIL +EG +KL DFG++ + + + +S GT +MAPEV+ G ++D
Sbjct: 154 RDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADW 213
Query: 203 WSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
WS G + E+LT P ++ + ++ + +P+ LS + LR FK++ R
Sbjct: 214 WSYGVLMFEMLTGSLP-FQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 7/234 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
+G + E+ PP++ QP+ +IV + P S D+ D LR + D
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVD 276
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 193
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 194 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 252
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 253 GGPSDAKEVMEH 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 128/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 68
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 126
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + +T + GT ++ PE+IE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--LCGTLDYLPPEMIEGRMH 184
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQ-EIDLLKNLNH 76
+YM G +GKG + + Y+ D++ + A K V + + M EI + K+L++
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
++V + G + ++++LE SL + K K PE+ ++ Q ++G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA--RYFMRQTIQGVQYLH 159
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
VIHRD+K N+ + VK+ DFG+ATK+ ++ GTP ++APEV+ G
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
DIWS+GC + LL PP+ RI ++E +P ++P + +R+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLH 278
Query: 257 KDARQRPDAKTLLS 270
D RP LL+
Sbjct: 279 ADPTLRPSVAELLT 292
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 191 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 250 GGPSDAKEVMEH 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 68
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 126
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T S GT ++ PE+IE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS--GTLDYLPPEMIEGRMH 184
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 9/227 (3%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L KY +++G+G YG VYK D G VA+K++ L+ + + ++EI LLK L+
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NIV + + + L ++ E++E L ++ NK G +S + +Y+ Q+L G+ +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHC 135
Query: 136 HEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIEMS 194
H+ ++HRD+K N+L +G +KLADFG+A TH VV T ++ AP+V+ S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 195 GVCAAS-DIWSVGCTVIELLTCVPPYYEL---QPMPALFRIVQDERP 237
+ S DIWS+GC E++T P + + +P +F I+ P
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 126/227 (55%), Gaps = 9/227 (3%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L KY +++G+G YG VYK D G VA+K++ L+ + + ++EI LLK L+
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NIV + + + L ++ E++E L ++ NK G +S + +Y+ Q+L G+ +
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG-LQDSQIKIYLYQLLRGVAHC 135
Query: 136 HEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIEMS 194
H+ ++HRD+K N+L +G +KLADFG+A TH VV T ++ AP+V+ S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGS 194
Query: 195 GVCAAS-DIWSVGCTVIELLTCVPPYYEL---QPMPALFRIVQDERP 237
+ S DIWS+GC E++T P + + +P +F I+ P
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNP 241
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 72
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 130
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 143/280 (51%), Gaps = 12/280 (4%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
++ ++Y L +E+GKGA+ V + + + G A K ++ + ++ D + +E + + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVY 134
H NIV+ S+ +++ + V G L I ++ + E+ + I Q+LE + +
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESVNH 118
Query: 135 LHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
H G++HRD+K N+L +K VKLADFG+A ++ GTP +++PEV+
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDI 247
D+W+ G + LL PP+++ + L++ ++ D P ++++P+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
D + + + +R A L HPWI C+R+ +S+ H
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI--CQRSTVASMMH 275
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
+G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H N
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPN 73
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I++ G + +++ILEY G++ ++ K F E A YI ++ L Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSRFDEQRTATYITELANALSYCHSK 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMHDE 189
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G E L +PP +E +R + P+ ++ D + + K +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPP-FEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 259 ARQRPDAKTLLSHPWIQ 275
A QR +L HPWI+
Sbjct: 249 ASQRLTLAEVLEHPWIK 265
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 10/271 (3%)
Query: 10 FHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID 69
+ +++ + + Y D +G GA+ V D VAIK ++ + + ++ + EI
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIA 68
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
+L + H NIV ++ HL++I++ V G L + I F + E + I QVL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVL 126
Query: 130 EGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
+ + YLH+ G++HRD+K N+L ++ + ++DFG+ +K+ + + GTP ++
Sbjct: 127 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMEDPGSVLSTACGTPGYV 185
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER---PPIPESL 243
APEV+ A D WS+G LL PP+Y+ +I++ E P + +
Sbjct: 186 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDI 245
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R +KD +R + L HPWI
Sbjct: 246 SDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 125/238 (52%), Gaps = 7/238 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP +APE+I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEALAPEIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G+G++G+V+ + D A+K + + D E D+L +NH IVK
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T L++IL+++ G L + +K F E V Y+A++ L +LH G+I+
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 150
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K NIL +EG +KL DFG++ + + + +S GT +MAPEV+ G ++D
Sbjct: 151 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 210
Query: 203 WSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
WS G + E+LT P ++ + ++ + +P+ LSP+ LR FK++ R
Sbjct: 211 WSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANR 269
Query: 263 PDA 265
A
Sbjct: 270 LGA 272
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G++GRV E+G+ A+K + + + + + + + E +L+ +N +VK
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S K S+L++++EYV G + + ++ + G F E Y AQ++ YLH +I+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K N+L ++G +++ DFG A ++ T + GTP ++AP +I G A D W+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKG---RTWXLCGTPEYLAPAIILSKGYNKAVDWWA 223
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E+ PP++ QP+ +IV + P S D+ D LR + D +R
Sbjct: 224 LGVLIYEMAAGYPPFFADQPIQIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
Query: 263 ---------PDAKTLLSHPWIQNCRRALQS----SLRHSGTMRNVEENGSADAEIPSEDN 309
+ K + WI +R +++ + G N ++ + EI N
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD--YEEEEIRVXIN 340
Query: 310 QSAGESLS 317
+ G+ +
Sbjct: 341 EKCGKEFT 348
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 191 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 250 GGPSDAKEVMEH 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G+G++G+V+ + D A+K + + D E D+L +NH IVK
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T L++IL+++ G L + +K F E V Y+A++ L +LH G+I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 149
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K NIL +EG +KL DFG++ + + + +S GT +MAPEV+ G ++D
Sbjct: 150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 203 WSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
WS G + E+LT P ++ + ++ + +P+ LSP+ LR FK++ R
Sbjct: 210 WSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANR 268
Query: 263 PDA 265
A
Sbjct: 269 LGA 271
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 35/282 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G+YG V K + + G VAIK+ + + I M+EI LLK L H+N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 86 LKTRSHLHIILEYVENGSLANI-IKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
K + +++ E+V++ L ++ + PN +V Y+ Q++ G+ + H +IHRD
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLD---YQVVQKYLFQIINGIGFCHSHNIIHRD 149
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS-GVCAASDIW 203
IK NIL ++ G+VKL DFG A L V T ++ APE++ A D+W
Sbjct: 150 IKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209
Query: 204 SVGCTVIEL-------------------LTC----VPPYYEL---QPMPALFRIVQ-DER 236
++GC V E+ + C +P + EL P+ A R+ + ER
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKER 269
Query: 237 PPIPE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P+ LS + D ++C D +RP LL H + Q
Sbjct: 270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 41/296 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGD-FVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
D +Y EIG+GAYG+V+K DL+NG FVA+K+V ++ +E + + ++E+ +L++L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT-GEEGMPLSTIREVAVLRHL 68
Query: 75 N---HKNIVKYLGSLKT-----RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
H N+V+ + L ++ E+V+ + K + G P + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMF 127
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
Q+L GL +LH V+HRD+K NIL T G +KLADFG+A ++ + SVV T ++
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYR 186
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-------QDERP-- 237
APEV+ S D+WSVGC E+ P + + L +I+ +++ P
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246
Query: 238 --------------PIPESLSPDI----TDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
PI E DI D L +C + +R A + LSHP+ Q
Sbjct: 247 VALPRQAFHSKSAQPI-EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G+G++G+V+ + D A+K + + D E D+L +NH IVK
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T L++IL+++ G L + +K F E V Y+A++ L +LH G+I+
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 149
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K NIL +EG +KL DFG++ + + + +S GT +MAPEV+ G ++D
Sbjct: 150 RDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADW 209
Query: 203 WSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
WS G + E+LT P ++ + ++ + +P+ LSP+ LR FK++ R
Sbjct: 210 WSFGVLMFEMLTGTLP-FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANR 268
Query: 263 PDA 265
A
Sbjct: 269 LGA 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAI+ +S A + D LN+
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNV-ET 203
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 260
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 319
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 320 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 379
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 380 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 2 SRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQ 58
S+Q + + L++ + +G +GKG +G VY + ++ +A+K + LE
Sbjct: 19 SKQKNEESKKRQWALED-FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV 77
Query: 59 EDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPE 118
E + + +E+++ +L H NI++ G + +++ILEY G++ ++ K F E
Sbjct: 78 E--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDE 133
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
A YI ++ L Y H + VIHRDIK N+L G +K+ADFG + + +
Sbjct: 134 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD--D 191
Query: 179 VVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP 238
+ GT ++ PE+IE D+WS+G E L PP +E ++ +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFT 250
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
P+ ++ D + + K + QRP + +L HPWI
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQ-EIDLLKNLNH 76
+YM G +GKG + + Y+ D++ + A K V + + M EI + K+L++
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
++V + G + ++++LE SL + K K PE+ ++ Q ++G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA--RYFMRQTIQGVQYLH 159
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
VIHRD+K N+ + VK+ DFG+ATK+ + GTP ++APEV+ G
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
DIWS+GC + LL PP+ RI ++E +P ++P + +R+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLH 278
Query: 257 KDARQRPDAKTLLS 270
D RP LL+
Sbjct: 279 ADPTLRPSVAELLT 292
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + GTP ++APEV+E + A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 191 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 250 GGPSDAKEVMEH 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQ-EIDLLKNLNH 76
+YM G +GKG + + Y+ D++ + A K V + + M EI + K+L++
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
++V + G + ++++LE SL + K K PE+ ++ Q ++G+ YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA--RYFMRQTIQGVQYLH 159
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
VIHRD+K N+ + VK+ DFG+ATK+ + GTP ++APEV+ G
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
DIWS+GC + LL PP+ RI ++E +P ++P + +R+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLH 278
Query: 257 KDARQRPDAKTLLS 270
D RP LL+
Sbjct: 279 ADPTLRPSVAELLT 292
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + GTP ++APEV+E + A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 191 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 250 GGPSDAKEVMEH 261
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-----QED--LNIIMQ 66
K L ++Y++ +G GA G V + + VAI+ +S A + D LN+
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNV-ET 189
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
EI++LK LNH I+K + +I+LE +E G L + + NK E+ +Y
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLYFY 246
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTP 183
Q+L + YLHE G+IHRD+K N+L + ++ L+K+ DFG + L E + ++ GTP
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 305
Query: 184 YWMAPEV---IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDERPPI 239
++APEV + +G A D WS+G + L+ PP+ E + +L +I + I
Sbjct: 306 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 365
Query: 240 PE---SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
PE +S D +++ D + R + L HPW+Q+
Sbjct: 366 PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 12/267 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKN 78
+ G +G+G++ V +L AIK + +I +E+ + + +E D++ L+H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
VK + + L+ L Y +NG L I+ K G F E+ Y A+++ L YLH +
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVIEMSGV 196
G+IHRD+K NIL ++ +++ DFG A L+ + VGT +++PE++
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
+SD+W++GC + +L+ +PP+ +I++ E PE P D + +
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-DFPEKFFPKARDLVEKLLV 270
Query: 257 KDARQRPDAKT------LLSHPWIQNC 277
DA +R + L +HP+ ++
Sbjct: 271 LDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQ-EIDLLKNLNH 76
+YM G +GKG + + Y+ D++ + A K V + + M EI + K+L++
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
++V + G + ++++LE SL + K K PE+ ++ Q ++G+ YLH
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA--RYFMRQTIQGVQYLH 143
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
VIHRD+K N+ + VK+ DFG+ATK+ + GTP ++APEV+ G
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
DIWS+GC + LL PP+ RI ++E +P ++P + +R+
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY-SVPRHINPVASALIRRMLH 262
Query: 257 KDARQRPDAKTLLS 270
D RP LL+
Sbjct: 263 ADPTLRPSVAELLT 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 140/279 (50%), Gaps = 11/279 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L +E+GKGA+ V + + + G A K ++ + ++ D + +E + + L H NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
V+ S+ H ++I + V G L I ++ + E+ + I Q+LE +++ H+ G
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMG 141
Query: 140 VIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
V+HRD+K N+L K VKLADFG+A ++ GTP +++PEV+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDITDFLR 252
D+W+ G + LL PP+++ + L++ ++ D P ++++P+ D +
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + +R A L HPWI + R + S + T+
Sbjct: 261 KMLTINPSKRITAAEALKHPWISH-RSTVASCMHRQETV 298
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 71
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 129
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 187
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 246
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 247 HNPSQRPMLREVLEHPWI 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 125/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 72
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G + ++ K F E A YI ++ L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQ--KLSKFDEQRTATYITELANALSYCH 130
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLXGTLDYLPPEMIEGRMH 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + GTP ++APEV+E + A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 190
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 191 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 250 GGPSDAKEVMEH 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T L ++EY G L + + F E Y A+++ L YLH + V++RD
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSRDVVYRD 135
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N++ K+G +K+ DFG+ + GTP ++APEV+E + A D W
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWG 195
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR-- 262
+G + E++ P+Y Q LF ++ E P +LSP+ L KKD +QR
Sbjct: 196 LGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 254
Query: 263 ---PDAKTLLSH 271
DAK ++ H
Sbjct: 255 GGPSDAKEVMEH 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 66
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 124
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 182
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 241
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 242 HNPSQRPMLREVLEHPWI 259
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 9/273 (3%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
S + Y + +E+GKGA+ V + + G A K ++ + ++ D + +E + +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L H NIV+ S++ S +++ + V G L I +F + E+ + I Q+LE +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 118
Query: 133 VYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
Y H G++HR++K N+L K VKLADFG+A ++ +++ H GTP +++PE
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPE 177
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI---VQDERPPIPESLSPD 246
V++ DIW+ G + LL PP+++ +I D P ++++P+
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
+ + ++R A L PWI N R
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICNRER 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 17/275 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLK-NLNHKNIVKYL 83
+GKG++G+V E GD A+K + + I Q+D + M E +L NH + +
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+T L ++E+V G L I+ ++ F E+ Y A+++ L++LH++G+I+R
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYR 148
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N+L EG KLADFG+ + V T + GTP ++APE+++ A D W
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWW 208
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRP 263
++G + E+L P +E + LF + ++ P L D T L+ K+ R
Sbjct: 209 AMGVLLYEMLCGHAP-FEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL 267
Query: 264 DAKT------LLSHP------WIQNCRRALQSSLR 286
+ T +L HP W Q R ++ R
Sbjct: 268 GSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFR 302
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + ++ GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 69
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 127
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+A+FG + + T + GT ++ PE+IE
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 185
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 245 HNPSQRPMLREVLEHPWI 262
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 11/272 (4%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEID 69
H + ++Y +GKG++G V D G A+K +S + Q+ D +++E+
Sbjct: 19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LLK L+H NI K + + + +++ E G L + I K F E A I QVL
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVL 136
Query: 130 EGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
G+ Y H+ ++HRD+K N+L +K+ +++ DFG++T EA +GT Y++
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKIGTAYYI 195
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESL 243
APEV+ + D+WS G + LL+ PP+ L ++ + + P + +
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 254
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
S D +R+ R A+ L H WIQ
Sbjct: 255 SESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 49/303 (16%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D+ + E+G G G V+K +G +A K + LE I N I++E+ +L N
Sbjct: 67 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNS 125
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
IV + G+ + + I +E+++ GSL ++K K G PE ++ V++GL YL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 137 EQ-GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
E+ ++HRD+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ +
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTH 241
Query: 196 VCAASDIWSVGCTVIELLTC---VPP---------------------------------Y 219
SDIWS+G +++E+ +PP
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS 301
Query: 220 YELQPMP--ALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTLLSHP 272
Y + P A+F IV + P +P ++ S + DF+ +C K+ +R D K L+ H
Sbjct: 302 YGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 361
Query: 273 WIQ 275
+I+
Sbjct: 362 FIK 364
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 69
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 127
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMH 185
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 244
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 245 HNPSQRPMLREVLEHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + + +A+K + LE E + + +E+++ +L H
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 64
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 122
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + T + GT ++ PE+IE
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 180
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 239
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 240 HNPSQRPMLREVLEHPWI 257
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 11/273 (4%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEID 69
H + ++Y +GKG++G V D G A+K +S + Q+ D +++E+
Sbjct: 25 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LLK L+H NI+K + + + +++ E G L + I K F E A I QVL
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVL 142
Query: 130 EGLVYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
G+ Y+H+ ++HRD+K N+L +K+ +++ DFG++T EA +GT Y++
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKIGTAYYI 201
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP---PIPESL 243
APEV+ + D+WS G + LL+ PP+ L ++ + + P + +
Sbjct: 202 APEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKV 260
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
S D +R+ R A+ L H WIQ
Sbjct: 261 SESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 72
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 130
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--DLCGTLDYLPPEMIEGRMH 188
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 247
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 248 HNPSQRPMLREVLEHPWI 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--ELCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
S + Y + +E+GKGA+ V + + G A K ++ + ++ D + +E + +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L H NIV+ S++ S +++ + V G L I +F + E+ + I Q+LE +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 118
Query: 133 VYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
Y H G++HR++K N+L K VKLADFG+A ++ +++ H GTP +++PE
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPE 177
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI---VQDERPPIPESLSPD 246
V++ DIW+ G + LL PP+++ +I D P ++++P+
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 237
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ + ++R A L PWI N
Sbjct: 238 AKSLIDSMLTVNPKKRITADQALKVPWICN 267
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH-EQGVIHR 143
S +T L ++EY G L + + F E Y A+++ L YLH E+ V++R
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYR 276
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N++ K+G +K+ DFG+ + + + GTP ++APEV+E + A D W
Sbjct: 277 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR- 262
+G + E++ P+Y Q LF ++ E P +L P+ L KKD +QR
Sbjct: 337 GLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 395
Query: 263 ----PDAKTLLSH 271
DAK ++ H
Sbjct: 396 GGGSEDAKEIMQH 408
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 10/210 (4%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL--ENIAQEDLN-IIMQEIDL 70
K+ +Y D +G+G + VYK D VAIK++ L + A++ +N ++EI L
Sbjct: 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 71 LKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
L+ L+H NI+ L + +S++ ++ +++E L IIK N P S + Y+ L+
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTP-SHIKAYMLMTLQ 123
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
GL YLH+ ++HRD+K N+L + G++KLADFG+A + V T ++ APE+
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 191 I---EMSGVCAASDIWSVGCTVIELLTCVP 217
+ M GV D+W+VGC + ELL VP
Sbjct: 184 LFGARMYGV--GVDMWAVGCILAELLLRVP 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 10/273 (3%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
+K DN Y + +E+GKGA+ V + + G A K ++ + ++ D + +E + +
Sbjct: 1 TKFSDN-YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 59
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L H NIV+ S++ S +++ + V G L I +F + E+ + I Q+LE +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 117
Query: 133 VYLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
Y H G++HR++K N+L K VKLADFG+A ++ +++ H GTP +++PE
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPE 176
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI---VQDERPPIPESLSPD 246
V++ DIW+ G + LL PP+++ +I D P ++++P+
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE 236
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
+ + ++R A L PWI N R
Sbjct: 237 AKSLIDSMLTVNPKKRITADQALKVPWICNRER 269
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 68
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 126
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMH 184
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 243
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 244 HNPSQRPMLREVLEHPWI 261
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH-EQGVIHR 143
S +T L ++EY G L + + F E Y A+++ L YLH E+ V++R
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYR 273
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N++ K+G +K+ DFG+ + + + GTP ++APEV+E + A D W
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWW 333
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR- 262
+G + E++ P+Y Q LF ++ E P +L P+ L KKD +QR
Sbjct: 334 GLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 392
Query: 263 ----PDAKTLLSH 271
DAK ++ H
Sbjct: 393 GGGSEDAKEIMQH 405
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+A+FG + + T + GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT--LCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + ++ GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 147/303 (48%), Gaps = 49/303 (16%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D+ + E+G G G V+K +G +A K + LE I N I++E+ +L N
Sbjct: 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNS 90
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
IV + G+ + + I +E+++ GSL ++K K G PE ++ V++GL YL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 137 EQ-GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
E+ ++HRD+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ +
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTH 206
Query: 196 VCAASDIWSVGCTVIELLTC---VPP--YYELQPM--------------------PALFR 230
SDIWS+G +++E+ +PP EL+ M L +
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNK 266
Query: 231 IVQDERPPI-------------PESL-----SPDITDFLRQCFKKDARQRPDAKTLLSHP 272
D RPP+ P L S + DF+ +C K+ +R D K L+ H
Sbjct: 267 FGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326
Query: 273 WIQ 275
+I+
Sbjct: 327 FIK 329
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 81
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 200 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 259
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 260 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + + GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD--DLCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH-EQGVIHR 143
S +T L ++EY G L + + F E Y A+++ L YLH E+ V++R
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 135 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 194
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR- 262
+G + E++ P+Y Q LF ++ E P +L P+ L KKD +QR
Sbjct: 195 GLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 253
Query: 263 ----PDAKTLLSHPWI 274
DAK ++ H +
Sbjct: 254 GGGSEDAKEIMQHRFF 269
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 7/258 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G VY + +N +A+K + + +E + + + +EI++ +L H NI++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
R ++++LE+ G L ++ K G F E A ++ ++ + L Y HE+ VIHRD
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ--KHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
IK N+L +G +K+ADFG + + + + GT ++ PE+IE D+W
Sbjct: 140 IKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 205 VGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRPD 264
G E L +PP+ RIV + P LS D + + + QR
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-KFPPFLSDGSKDLISKLLRYHPPQRLP 256
Query: 265 AKTLLSHPWIQ-NCRRAL 281
K ++ HPW++ N RR L
Sbjct: 257 LKGVMEHPWVKANSRRVL 274
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 70
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMH 186
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 245
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 246 HNPSQRPMLREVLEHPWI 263
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 138/269 (51%), Gaps = 28/269 (10%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y + G+ VA+K + + Q + QEID+L+ L H++I+
Sbjct: 38 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR-SGWKQEIDILRTLYHEHII 96
Query: 81 KYLGSLK--TRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + L +++EYV GSL + + + G + + ++ Q+ EG+ YLH Q
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG---LAQLLLFAQQICEGMAYLHAQ 153
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTP-YWMAPEVIEMSG 195
IHRD+ N+L + LVK+ DFG+A + E +P +W APE ++
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 196 VCAASDIWSVGCTVIELLT-C----VPP--YYEL----QPMPALFRIVQ----DERPPIP 240
ASD+WS G T+ ELLT C PP + EL Q + R+ + ER P P
Sbjct: 214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP 273
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ ++ ++ C++ +A RP + L+
Sbjct: 274 DKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH-EQGVIHR 143
S +T L ++EY G L + + F E Y A+++ L YLH E+ V++R
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 136 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 195
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR- 262
+G + E++ P+Y Q LF ++ E P +L P+ L KKD +QR
Sbjct: 196 GLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 254
Query: 263 ----PDAKTLLSH 271
DAK ++ H
Sbjct: 255 GGGSEDAKEIMQH 267
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 79
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 198 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 257
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 258 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRXXLCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 256 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+GKG +G+V + G + A+K + E I A++++ + E +L+N H +
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH-EQGVIHR 143
S +T L ++EY G L + + F E Y A+++ L YLH E+ V++R
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N++ K+G +K+ DFG+ + + GTP ++APEV+E + A D W
Sbjct: 134 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWW 193
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR- 262
+G + E++ P+Y Q LF ++ E P +L P+ L KKD +QR
Sbjct: 194 GLGVVMYEMMCGRLPFYN-QDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 252
Query: 263 ----PDAKTLLSHPWI 274
DAK ++ H +
Sbjct: 253 GGGSEDAKEIMQHRFF 268
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 105
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 283
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 284 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 80
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 258
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 259 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 78
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 256
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 257 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 73
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 251
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 252 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + ++ +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + + GT ++ PE+IE
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTX--LCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNH 76
+ +G +GKG +G VY + + +A+K + LE E + + +E+++ +L H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI++ G + +++ILEY G++ ++ K F E A YI ++ L Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ VIHRDIK N+L G +K+ADFG + + ++ GT ++ PE+IE
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--RRAALCGTLDYLPPEMIEGRMH 183
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
D+WS+G E L PP +E ++ + P+ ++ D + + K
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP-FEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLK 242
Query: 257 KDARQRPDAKTLLSHPWI 274
+ QRP + +L HPWI
Sbjct: 243 HNPSQRPMLREVLEHPWI 260
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 146/307 (47%), Gaps = 53/307 (17%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D+ + E+G G G V K +G +A K + LE I N I++E+ +L N
Sbjct: 15 DDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLE-IKPAIRNQIIRELQVLHECNS 73
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
IV + G+ + + I +E+++ GSL ++K K PE ++ VL GL YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAYLR 131
Query: 137 EQ-GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
E+ ++HRD+K +NIL G +KL DFGV+ +L ++ N S VGT +MAPE ++ +
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQGTH 189
Query: 196 VCAASDIWSVGCTVIELLTC---VPP--YYELQ--------------------------- 223
SDIWS+G +++EL +PP EL+
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGR 249
Query: 224 ----------PMPALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTL 268
P A+F IV + P +P + +PD +F+ +C K+ +R D K L
Sbjct: 250 PVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML 309
Query: 269 LSHPWIQ 275
+H +I+
Sbjct: 310 TNHTFIK 316
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 271 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 271 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 253 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 136/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 191 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 250
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 251 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 49/295 (16%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ + SDIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 204 SVGCTVIELLTC---VPP---------------------------------YYELQPMP- 226
S+G +++E+ +PP Y + P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 227 -ALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
A+F IV + P +P + S + DF+ +C K+ +R D K L+ H +I+
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 49/295 (16%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ + SDIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 204 SVGCTVIELLTC---VPP---------------------------------YYELQPMP- 226
S+G +++E+ +PP Y + P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 227 -ALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
A+F IV + P +P + S + DF+ +C K+ +R D K L+ H +I+
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 49/295 (16%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ + SDIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 204 SVGCTVIELLTC---VPP---------------------------------YYELQPMP- 226
S+G +++E+ +PP Y + P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 227 -ALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
A+F IV + P +P + S + DF+ +C K+ +R D K L+ H +I+
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 144/295 (48%), Gaps = 49/295 (16%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G G V+K +G +A K + LE I N I++E+ +L N IV + G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ-GVIHR 143
+ + + I +E+++ GSL ++K K G PE ++ V++GL YL E+ ++HR
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K +NIL G +KL DFGV+ +L ++ N S VGT +M+PE ++ + SDIW
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 204 SVGCTVIELLTC---VPP---------------------------------YYELQPMP- 226
S+G +++E+ +PP Y + P
Sbjct: 188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP 247
Query: 227 -ALFR----IVQDERPPIPESL-SPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
A+F IV + P +P + S + DF+ +C K+ +R D K L+ H +I+
Sbjct: 248 MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 137/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 75
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ +K + Y +Q+ +G+ YL +
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHR++ NIL E VK+ DFG+ TK+ D + V +P +W APE + S
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGL-TKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 253
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 254 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 16/252 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G G +G V+ G N VA+K + ++ + ++E +L+K L H +V+
Sbjct: 21 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ ++II EY+ GSL + +K ++ G + + AQ+ EG+ Y+ + IHRD+
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDL 136
Query: 146 KGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIWS 204
+ AN+L ++ + K+ADFG+A + + + P W APE I SD+WS
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 205 VGCTVIELLTCVPPYYELQPMPA------LFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
G + E++T Y P P + + Q R P E+ ++ D ++ C+K+
Sbjct: 197 FGILLYEIVT-----YGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEK 251
Query: 259 ARQRPDAKTLLS 270
A +RP L S
Sbjct: 252 AEERPTFDYLQS 263
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 12/279 (4%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+Y L +E+GKGA+ V + + + G A ++ + ++ D + +E + + L
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NIV+ S+ H ++I + V G L I ++ + E+ + I Q+LE +++
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHC 126
Query: 136 HEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
H+ GV+HR++K N+L K VKLADFG+A ++ GTP +++PEV+
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDIT 248
D+W+ G + LL PP+++ + L++ ++ D P ++++P+
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 245
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
D + + + +R A L HPWI + R+ +S H
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISH--RSTVASCMH 282
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 28/269 (10%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y + G+ VA+K + + + + QEID+L+ L H++I+
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 81 KYLGSLKTRSH--LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + L +++EYV GSL + + + G + + ++ Q+ EG+ YLH Q
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG---LAQLLLFAQQICEGMAYLHSQ 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTP-YWMAPEVIEMSG 195
IHR++ N+L + LVK+ DFG+A + E +P +W APE ++
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 196 VCAASDIWSVGCTVIELLT-C----VPP--YYEL----QPMPALFRIVQ----DERPPIP 240
ASD+WS G T+ ELLT C PP + EL Q + R+ + ER P P
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP 256
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ ++ ++ C++ +A RP + L+
Sbjct: 257 DKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 32/271 (11%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV---------SLENIAQEDLNIIMQEIDL 70
++ + +G GA+ V+ G A+K + SLEN EI +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN-----------EIAV 59
Query: 71 LKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
LK + H+NIV ++ +H +++++ V G L + I G + E ++ I QVL
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLS 117
Query: 131 GLVYLHEQGVIHRDIKGANILT---TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMA 187
+ YLHE G++HRD+K N+L + + + DFG+ +K+ + + + + GTP ++A
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL-SKMEQNGIMS-TACGTPGYVA 175
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDE----RPPIPESL 243
PEV+ A D WS+G LL PP+YE + LF +++ P + +
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIKEGYYEFESPFWDDI 234
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+ +KD +R + LSHPWI
Sbjct: 235 SESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%), Gaps = 5/245 (2%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLK-NLNHK 77
++L +GKG++G+V+ + F AIK + + + +D+ M E +L H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+ + +T+ +L ++EY+ G L I+ F S Y A+++ GL +LH
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS 136
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVC 197
+G+++RD+K NIL K+G +K+ADFG+ + D T+ GTP ++APE++
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYN 196
Query: 198 AASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
+ D WS G + E+L P++ Q LF ++ + P P L + D L + F +
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 255
Query: 258 DARQR 262
+ +R
Sbjct: 256 EPEKR 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 138/269 (51%), Gaps = 28/269 (10%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y + G+ VA+K + + + + QEID+L+ L H++I+
Sbjct: 21 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 81 KYLGSLKTRSH--LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + L +++EYV GSL + + + G + + ++ Q+ EG+ YLH Q
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG---LAQLLLFAQQICEGMAYLHAQ 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTP-YWMAPEVIEMSG 195
IHR++ N+L + LVK+ DFG+A + E +P +W APE ++
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 196 VCAASDIWSVGCTVIELLT-C----VPP--YYEL----QPMPALFRIVQ----DERPPIP 240
ASD+WS G T+ ELLT C PP + EL Q + R+ + ER P P
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRP 256
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ ++ ++ C++ +A RP + L+
Sbjct: 257 DKCPCEVYHLMKNCWETEASFRPTFENLI 285
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEID 69
H + Y+LGD +G G +G+V G G VA+K ++ + I D+ I +EI
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ 63
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LK H +I+K + T + +++EYV G L + I K G E Q+L
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQIL 121
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
+ Y H V+HRD+K N+L K+ADFG++ +++ + S G+P + APE
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS-CGSPNYAAPE 180
Query: 190 VIEMSGVCAAS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPD 246
VI SG A DIWS G + LL P+ + + +P LF+ ++ IPE L+
Sbjct: 181 VI--SGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYIPEYLNRS 237
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ L + D +R K + H W +
Sbjct: 238 VATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEID 69
H + Y+LGD +G G +G+V G G VA+K ++ + I D+ I +EI
Sbjct: 4 HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ 63
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
LK H +I+K + T + +++EYV G L + I K G E Q+L
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEMEARRLFQQIL 121
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
+ Y H V+HRD+K N+L K+ADFG++ +++ + S G+P + APE
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS-CGSPNYAAPE 180
Query: 190 VIEMSGVCAAS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPD 246
VI SG A DIWS G + LL P+ + + +P LF+ ++ IPE L+
Sbjct: 181 VI--SGRLYAGPEVDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYIPEYLNRS 237
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ L + D +R K + H W +
Sbjct: 238 VATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 14/266 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L + + + E+G+GA VY+ A+K + D I+ EI +L L+
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK----KTVDKKIVRTEIGVLLRLS 106
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NI+K +T + + ++LE V G L + I G + E A + Q+LE + YL
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYL 164
Query: 136 HEQGVIHRDIKGANILTTK---EGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
HE G++HRD+K N+L + +K+ADFG+ +K+ E V +V GTP + APE++
Sbjct: 165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGL-SKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF-RIVQDER---PPIPESLSPDIT 248
D+WSVG LL P+Y+ + +F RI+ E P + +S +
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAK 283
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWI 274
D +R+ D ++R L HPW+
Sbjct: 284 DLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 16/273 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE------NIAQEDLNIIMQEID 69
++ Y L + IGKG + V + ++ E G A+K V + ++ EDL +E
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REAS 80
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLA-NIIKPNKFG-PFPESLVAVYIAQ 127
+ L H +IV+ L + + L+++ E+++ L I+K G + E++ + Y+ Q
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 128 VLEGLVYLHEQGVIHRDIK-GANILTTKE--GLVKLADFGVATKLTEADVNTHSVVGTPY 184
+LE L Y H+ +IHRD+K +L +KE VKL FGVA +L E+ + VGTP+
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQP--MPALFRIVQDERPPIPES 242
+MAPEV++ D+W G + LL+ P+Y + + + P
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 260
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+S D +R+ D +R L+HPW++
Sbjct: 261 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 10 FHKSKTLDNKYML-GDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEI 68
F + +N Y+L E+G+G + V + + G A K + Q+ I+ EI
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 69 DLLK-NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
+L+ + ++ + S + +ILEY G + ++ P E+ V I Q
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 139
Query: 128 VLEGLVYLHEQGVIHRDIKGANILTTK---EGLVKLADFGVATKLTEADVNTHSVVGTPY 184
+LEG+ YLH+ ++H D+K NIL + G +K+ DFG++ K+ A ++GTP
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA-CELREIMGTPE 198
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ---DERPPIPE 241
++APE++ + A+D+W++G LLT P+ I Q D
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS 258
Query: 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
S+S TDF++ K+ +RP A+ LSH W+Q
Sbjct: 259 SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+E++ GSL ++ +K + Y +Q+ +G+ YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 256 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 30/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G+ VA+K+ L++ +E L +EI++LK+L H NIV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 81 KYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + R +L +I+EY+ GSL + ++ + + Y +Q+ +G+ YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
IHRD+ NIL E VK+ DFG+ TK+ D V +P +W APE + S
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 195 GVCAASDIWSVGCTVIELLTCV-----PPYYEL-------QPMPALFRIVQ----DERPP 238
ASD+WS G + EL T + PP + Q +F +++ + R P
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P+ +I + +C+ + QRP + L
Sbjct: 256 RPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 5/239 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI-AQEDLNIIMQEIDLLK-NLNHKNIVKYL 83
+GKG++G+V+ + F AIK + + + +D+ M E +L H +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ +T+ +L ++EY+ G L I+ F S Y A+++ GL +LH +G+++R
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYR 143
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K NIL K+G +K+ADFG+ + D T+ GTP ++APE++ + D W
Sbjct: 144 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + E+L P++ Q LF ++ + P P L + D L + F ++ +R
Sbjct: 204 SFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 16/273 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE------NIAQEDLNIIMQEID 69
++ Y L + IGKG + V + ++ E G A+K V + ++ EDL +E
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK---REAS 78
Query: 70 LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLA-NIIKPNKFG-PFPESLVAVYIAQ 127
+ L H +IV+ L + + L+++ E+++ L I+K G + E++ + Y+ Q
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 128 VLEGLVYLHEQGVIHRDIK-GANILTTKE--GLVKLADFGVATKLTEADVNTHSVVGTPY 184
+LE L Y H+ +IHRD+K +L +KE VKL FGVA +L E+ + VGTP+
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQP--MPALFRIVQDERPPIPES 242
+MAPEV++ D+W G + LL+ P+Y + + + P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSH 258
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+S D +R+ D +R L+HPW++
Sbjct: 259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 149/302 (49%), Gaps = 13/302 (4%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLL 71
K ++ + Y + +E+G GA+G V++ ++ G K ++ D + EI ++
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIM 102
Query: 72 KNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEG 131
L+H ++ + + + + +ILE++ G L + I + E+ V Y+ Q EG
Sbjct: 103 NQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEG 161
Query: 132 LVYLHEQGVIHRDIKGANIL--TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
L ++HE ++H DIK NI+ T K VK+ DFG+ATKL ++ T + APE
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPE 220
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPD 246
+++ V +D+W++G LL+ + P+ +L+ + + R + S+SP+
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE 280
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSL---RHSGTMRNVEENGSADAE 303
DF++ +K+ R+R L HPW++ L S + R++ + ++E AD
Sbjct: 281 AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKIRQKIKEK-YADWP 339
Query: 304 IP 305
P
Sbjct: 340 AP 341
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNLN- 75
++Y EIG GAYG VYK D +G FVA+K V + N +E L I ++E+ LL+ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEA 62
Query: 76 --HKNIVKYLGSLKTRS-----HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
H N+V+ + T + ++ E+V+ + K G P + + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L GL +LH ++HRD+K NIL T G VKLADFG+A ++ + VV T ++ AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALFPVVVTLWYRAP 180
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EV+ S D+WSVGC E+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 137/278 (49%), Gaps = 33/278 (11%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY--- 82
+G+GA+G+V K + + + AIK++ +E L+ I+ E+ LL +LNH+ +V+Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 83 ----------LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ ++K +S L I +EY ENG+L ++I + ++ Q+LE L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQILEAL 129
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEA-DV-------------NTHS 178
Y+H QG+IHRD+K NI + VK+ DFG+A + + D+ N S
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 179 VVGTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP 237
+GT ++A EV++ +G D++S+G E++ E + R V E P
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFP 249
Query: 238 PIPESLSPDI-TDFLRQCFKKDARQRPDAKTLLSHPWI 274
P + + +R D +RP A+TLL+ W+
Sbjct: 250 PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 13/254 (5%)
Query: 26 IGKGAYGRVYKGLDL---ENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVK 81
IGKG +G VY G + +N AIK SL I + + + ++E L++ LNH N++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIK--SLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 82 YLGSLKTRSHL-HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+G + L H++L Y+ +G L I+ + P + L++ + QV G+ YL EQ
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVARGMEYLAEQKF 145
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPY-WMAPEVIEMSGV 196
+HRD+ N + + VK+ADFG+A + + + V H P W A E ++
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRF 205
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
SD+WS G + ELLT PPY + P + Q R P PE + ++QC+
Sbjct: 206 TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCW 265
Query: 256 KKDARQRPDAKTLL 269
+ D RP + L+
Sbjct: 266 EADPAVRPTFRVLV 279
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ KF SL+ +Y Q+ L YL
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 256 KKDARQRP 263
D +RP
Sbjct: 250 AYDPSRRP 257
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDL-NIIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ KF SL+ +Y Q+ L YL
Sbjct: 452 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYLES 509
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 256 KKDARQRP 263
D +RP
Sbjct: 630 AYDPSRRP 637
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNLN- 75
++Y EIG GAYG VYK D +G FVA+K V + N +E L I ++E+ LL+ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEA 62
Query: 76 --HKNIVKYLGSLKTRS-----HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
H N+V+ + T + ++ E+V+ + K G P + + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L GL +LH ++HRD+K NIL T G VKLADFG+A ++ + VV T ++ AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALDPVVVTLWYRAP 180
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EV+ S D+WSVGC E+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ ++ GTP ++APEV+ G D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 258
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 259 RPTINELLN 267
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNLN- 75
++Y EIG GAYG VYK D +G FVA+K V + N +E L I ++E+ LL+ L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEA 62
Query: 76 --HKNIVKYLGSLKTRS-----HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
H N+V+ + T + ++ E+V+ + K G P + + Q
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L GL +LH ++HRD+K NIL T G VKLADFG+A ++ + VV T ++ AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALAPVVVTLWYRAP 180
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EV+ S D+WSVGC E+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 85
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 143
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ ++ GTP ++APEV+ G D
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 203
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 262
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 263 RPTINELLN 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 12/277 (4%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+ Y L +E+GKGA+ V + + A K ++ + ++ D + +E + + L H
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
NIV+ S+ +++ + V G L I ++ + E+ + I Q+LE + ++H+
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIHQILESVNHIHQ 148
Query: 138 QGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
++HRD+K N+L K VKLADFG+A ++ GTP +++PEV+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDITDF 250
DIW+ G + LL PP+++ + L++ ++ D P ++++P+ +
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPFWD-EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 251 LRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
+ Q + +R A L HPW+ C+R+ +S+ H
Sbjct: 268 INQMLTINPAKRITADQALKHPWV--CQRSTVASMMH 302
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 133/269 (49%), Gaps = 27/269 (10%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG+GAYG V K + +G +A+K++ +E ++M ++++ + IV++ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPF---------PESLVAVYIAQVLEGLVYL 135
+L I +E + +KF + PE ++ ++ L +L
Sbjct: 89 ALFREGDCWICMELMSTSF-------DKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 136 HEQ-GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
E +IHRDIK +NIL + G +KL DFG++ +L ++ T PY MAPE I+ S
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPS 200
Query: 195 ----GVCAASDIWSVGCTVIELLTCVPPYYELQPM-PALFRIVQDERPPIPES----LSP 245
G SD+WS+G T+ EL T PY + + L ++V+ + P + S SP
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 246 DITDFLRQCFKKDARQRPDAKTLLSHPWI 274
+F+ C KD +RP K LL HP+I
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ ++ GTP ++APEV+ G D
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVD 199
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 258
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 259 RPTINELLN 267
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDL-NIIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ KF SL+ +Y Q+ L YL
Sbjct: 452 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYLES 509
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 629
Query: 256 KKDARQRP 263
D +RP
Sbjct: 630 AYDPSRRP 637
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 26/255 (10%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GA+G V K D VAIKQ+ E+ + + E+ L +NH NIVK G+
Sbjct: 17 VGRGAFGVVCKA-KWRAKD-VAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV-YIAQVLEGLVYLHE---QGVI 141
+ + +++EY E GSL N++ + P+ + A+ + Q +G+ YLH + +I
Sbjct: 71 --CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 142 HRDIKGANILTTKEGLV-KLADFGVATKLTEADVNTHSV--VGTPYWMAPEVIEMSGVCA 198
HRD+K N+L G V K+ DFG T D+ TH G+ WMAPEV E S
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDITDFLRQC 254
D++S G + E++T P+ E+ PA FRI+ RPP+ ++L I + +C
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIG-GPA-FRIMWAVHNGTRPPLIKNLPKPIESLMTRC 241
Query: 255 FKKDARQRPDAKTLL 269
+ KD QRP + ++
Sbjct: 242 WSKDPSQRPSMEEIV 256
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
L ++G G +G V+ G N VA+K + ++ + ++E +L+K L H +V+
Sbjct: 16 LVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMS---VQAFLEEANLMKTLQHDKLVR 71
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ ++II E++ GSL + +K ++ G + + AQ+ EG+ Y+ + I
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ AN+L ++ + K+ADFG+A + + + P W APE I S
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPA------LFRIVQDERPPIPESLSPDITDFLRQC 254
++WS G + E++T Y P P + + Q R P E+ ++ D ++ C
Sbjct: 192 NVWSFGILLYEIVT-----YGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIMKMC 246
Query: 255 FKKDARQRPDAKTLLS 270
+K+ A +RP L S
Sbjct: 247 WKEKAEERPTFDYLQS 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 23/259 (8%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSL---ENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G+VY+ + GD VA+K E+I+Q N+ QE L L H NI+
Sbjct: 15 IGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENV-RQEAKLFAMLKHPNIIAL 71
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV-- 140
G +L +++E+ G L ++ + P ++ + Q+ G+ YLH++ +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRI---PPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 141 -IHRDIKGANILTTKE--------GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
IHRD+K +NIL ++ ++K+ DFG+A + S G WMAPEVI
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT--TKMSAAGAYAWMAPEVI 186
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP-PIPESLSPDITDF 250
S SD+WS G + ELLT P+ + + + + ++ PIP +
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKL 246
Query: 251 LRQCFKKDARQRPDAKTLL 269
+ C+ D RP +L
Sbjct: 247 MEDCWNPDPHSRPSFTNIL 265
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 26/255 (10%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GA+G V K D VAIKQ+ E+ + + E+ L +NH NIVK G+
Sbjct: 16 VGRGAFGVVCKA-KWRAKD-VAIKQIESES----ERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV-YIAQVLEGLVYLHE---QGVI 141
+ + +++EY E GSL N++ + P+ + A+ + Q +G+ YLH + +I
Sbjct: 70 --CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 142 HRDIKGANILTTKEGLV-KLADFGVATKLTEADVNTHSV--VGTPYWMAPEVIEMSGVCA 198
HRD+K N+L G V K+ DFG T D+ TH G+ WMAPEV E S
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ----DERPPIPESLSPDITDFLRQC 254
D++S G + E++T P+ E+ PA FRI+ RPP+ ++L I + +C
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIG-GPA-FRIMWAVHNGTRPPLIKNLPKPIESLMTRC 240
Query: 255 FKKDARQRPDAKTLL 269
+ KD QRP + ++
Sbjct: 241 WSKDPSQRPSMEEIV 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 13/267 (4%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNL 74
L ++Y ++G GAYG V D G AIK + ++ + ++ E+ +LK L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLV 133
+H NI+K + + + ++++E G L + II KF E AV + QVL G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKF---SEVDAAVIMKQVLSGTT 118
Query: 134 YLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
YLH+ ++HRD+K N+L +++ L+K+ DFG++ E +GT Y++APEV
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 177
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDE---RPPIPESLSPDI 247
+ D+WS G + LL PP+ L R+ + + PP +S +
Sbjct: 178 LRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWI 274
++ + +R A+ L+HPWI
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ KF SL+ +Y Q+ L YL
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 256 KKDARQRP 263
D +RP
Sbjct: 250 AYDPSRRP 257
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 77 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 134
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 254
Query: 256 KKDARQRP 263
D +RP
Sbjct: 255 AYDPSRRP 262
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 36/288 (12%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+G YG VYK + G+ A+K++ LE + + ++EI +LK L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA-VYIAQVLEGLVYLHE 137
IVK + T+ L ++ E+++ L ++ + G ES+ A ++ Q+L G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGL--ESVTAKSFLLQLLNGIAYCHD 118
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ V+HRD+K N+L +EG +K+ADFG+A TH VV T ++ AP+V+ S
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 197 CAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-------------DERP----- 237
+ + DIWSVGC E++ P + + L RI + E P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 238 -----PIP-----ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P+P + L D L + K D QR AK L H + +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 21/279 (7%)
Query: 23 GDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
G+ +GKG +G+ K E G+ + +K+ L +E ++E+ +++ L H N++K+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+G L L+ I EY++ G+L IIK +P S + + G+ YLH +IH
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADV--------------NTHSVVGTPYWMAP 188
RD+ N L + V +ADFG+A + + ++VVG PYWMAP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 189 EVIEMSGVCAASDIWSVGCTVIELLTCV--PPYYELQPMPALFRIVQDERPPIPESLSPD 246
E+I D++S G + E++ V P Y + M + P + P
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPS 251
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSL 285
+C D +RP + L H W++ R L L
Sbjct: 252 FFPITVRCCDLDPEKRP-SFVKLEH-WLETLRMHLAGHL 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 36/288 (12%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+G YG VYK + G+ A+K++ LE + + ++EI +LK L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA-VYIAQVLEGLVYLHE 137
IVK + T+ L ++ E+++ L ++ + G ES+ A ++ Q+L G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGL--ESVTAKSFLLQLLNGIAYCHD 118
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ V+HRD+K N+L +EG +K+ADFG+A TH VV T ++ AP+V+ S
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 197 CAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-------------DERP----- 237
+ + DIWSVGC E++ P + + L RI + E P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 238 -----PIP-----ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P+P + L D L + K D QR AK L H + +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 105
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 163
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ + GTP ++APEV+ G D
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 223
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 282
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 283 RPTINELLN 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 103
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 161
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ + GTP ++APEV+ G D
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 221
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 280
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 281 RPTINELLN 289
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 100 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 157
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 277
Query: 256 KKDARQRP 263
D +RP
Sbjct: 278 AYDPSRRP 285
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 74 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 131
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 251
Query: 256 KKDARQRP 263
D +RP
Sbjct: 252 AYDPSRRP 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 75 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 132
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 252
Query: 256 KKDARQRP 263
D +RP
Sbjct: 253 AYDPSRRP 260
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL + VA+K + + + +E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 127
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANIL + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P+ ++ V+++ PIP E
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEG 245
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 10/249 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+GKG + + ++ D + + A K V L+ +E +++ EI + ++L H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM---EISIHRSLAHQHVVG 79
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ G + + ++LE SL + K K PE+ Y+ Q++ G YLH VI
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA--RYYLRQIVLGCQYLHRNRVI 137
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASD 201
HRD+K N+ ++ VK+ DFG+ATK+ + GTP ++APEV+ G D
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVD 197
Query: 202 IWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+WS+GC + LL PP+ RI ++E IP+ ++P +++ + D
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY-SIPKHINPVAASLIQKMLQTDPTA 256
Query: 262 RPDAKTLLS 270
RP LL+
Sbjct: 257 RPTINELLN 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 29/271 (10%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI+ ++G T+ L I+ ++ E SL + + ++ + L+ + Q G+ YLH
Sbjct: 80 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLH 137
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEVIEM 193
+ +IHRD+K NI ++ VK+ DFG+AT+ + +H + G+ WMAPEVI M
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRM 196
Query: 194 SG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD- 249
SD+++ G + EL+T PY + + +V SLSPD++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR------GSLSPDLSKV 250
Query: 250 ----------FLRQCFKKDARQRPDAKTLLS 270
+ +C KK +RP +L+
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 256 KKDARQRP 263
D +RP
Sbjct: 250 AYDPSRRP 257
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 36/288 (12%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+G YG VYK + G+ A+K++ LE + + ++EI +LK L H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA-VYIAQVLEGLVYLHE 137
IVK + T+ L ++ E+++ L ++ + G ES+ A ++ Q+L G+ Y H+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGL--ESVTAKSFLLQLLNGIAYCHD 118
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIEMSGV 196
+ V+HRD+K N+L +EG +K+ADFG+A TH +V T ++ AP+V+ S
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 197 CAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-------------DERP----- 237
+ + DIWSVGC E++ P + + L RI + E P
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 238 -----PIP-----ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P+P + L D L + K D QR AK L H + +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 72 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 249
Query: 256 KKDARQRP 263
D +RP
Sbjct: 250 AYDPSRRP 257
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 10/248 (4%)
Query: 22 LGDEIGKGAYGRVYKGLDL--ENGDF-VAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHK 77
LG IG+G +G V++G+ + EN VAIK + +N + + +QE ++ +H
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIK--TCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+IVK +G + T + + II+E G L + ++ K+ SL+ +Y Q+ L YL
Sbjct: 69 HIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYLES 126
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGV 196
+ +HRDI N+L + VKL DFG++ + ++ S P WMAPE I
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 197 CAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
+ASD+W G + E+L V P+ ++ + RI ER P+P + P + + +C+
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCW 246
Query: 256 KKDARQRP 263
D +RP
Sbjct: 247 AYDPSRRP 254
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 138/272 (50%), Gaps = 16/272 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE---DLNIIMQEIDLLK 72
L KY++GD +G+G+YG+V + LD E A+K + + + + + N+ +EI LL+
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANV-KKEIQLLR 61
Query: 73 NLNHKNIVKYLGSL--KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
L HKN+++ + L + + +++++EY G + ++ FP Y Q+++
Sbjct: 62 RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLID 120
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL--TEADVNTHSVVGTPYWMAP 188
GL YLH QG++H+DIK N+L T G +K++ GVA L AD + G+P + P
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 189 EVIE----MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLS 244
E+ SG DIWS G T+ + T + P +E + LF + IP
Sbjct: 181 EIANGLDTFSGF--KVDIWSAGVTLYNITTGLYP-FEGDNIYKLFENIGKGSYAIPGDCG 237
Query: 245 PDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
P ++D L+ + + +R + + H W +
Sbjct: 238 PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 109 bits (273), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL + VA+K + + + +E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 127
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANI+ + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P+ ++ V+++ PIP E
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEG 245
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G++G V++ D + G A+K+V LE E+L L IV G+
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMAC-------AGLTSPRIVPLYGA 153
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++ ++I +E +E GSL ++K G PE Y+ Q LEGL YLH + ++H D+
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 146 KGANILTTKEGL-VKLADFGVAT-----KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
K N+L + +G L DFG A L ++ + + GT MAPEV+ A
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAK 271
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP---IPESLSPDITDFLRQCFK 256
D+WS C ++ +L P+ + P +I E PP IP S +P +++ +
Sbjct: 272 VDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA-SEPPPVREIPPSCAPLTAQAIQEGLR 330
Query: 257 KDARQRPDAKTL 268
K+ R A L
Sbjct: 331 KEPIHRVSAAEL 342
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 13/247 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENI--AQEDLNIIMQEIDLLKNLNHKNIVKYL 83
IGKG++G+V F A+K + + I +E+ +I+ + LLKN+ H +V
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
S +T L+ +L+Y+ G L ++ + F E Y A++ L YLH +++R
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K NIL +G + L DFG+ + E + T + GTP ++APEV+ D W
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWW 223
Query: 204 SVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD----FLRQCFKKDA 259
+G + E+L +PP+Y I+ P L P+IT+ L +KD
Sbjct: 224 CLGAVLYEMLYGLPPFYSRNTAEMYDNILNK-----PLQLKPNITNSARHLLEGLLQKDR 278
Query: 260 RQRPDAK 266
+R AK
Sbjct: 279 TKRLGAK 285
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ +EDL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEEDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 33/278 (11%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY--- 82
+G+GA+G+V K + + + AIK++ +E L+ I+ E+ LL +LNH+ +V+Y
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 83 ----------LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ ++K +S L I +EY EN +L ++I + ++ Q+LE L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEAL 129
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEA-DV-------------NTHS 178
Y+H QG+IHRD+K NI + VK+ DFG+A + + D+ N S
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 179 VVGTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP 237
+GT ++A EV++ +G D++S+G E++ E + R V E P
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFP 249
Query: 238 PIPESLSPDI-TDFLRQCFKKDARQRPDAKTLLSHPWI 274
P + + +R D +RP A+TLL+ W+
Sbjct: 250 PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
L ++G G +G V+ ++ VA+K + +++ E + E +++K L H +VK
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAF---LAEANVMKTLQHDKLVK 247
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
L ++ T+ ++II E++ GSL + +K ++ P + + AQ+ EG+ ++ ++ I
Sbjct: 248 -LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 306
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE I S
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-DERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G ++E++T Y P + R ++ R P PE+ ++ + + +C+K
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP 426
Query: 260 RQRPDAKTLLS 270
+RP + + S
Sbjct: 427 EERPTFEYIQS 437
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S + +E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H NI+ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 13/267 (4%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNL 74
L ++Y ++G GAYG V D G AIK + ++ + ++ E+ +LK L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLAN-IIKPNKFGPFPESLVAVYIAQVLEGLV 133
+H NI+K + + + ++++E G L + II KF E AV + QVL G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQVLSGTT 135
Query: 134 YLHEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
YLH+ ++HRD+K N+L +++ L+K+ DFG++ E +GT Y++APEV
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEV 194
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDE---RPPIPESLSPDI 247
+ D+WS G + LL PP+ L R+ + + PP +S +
Sbjct: 195 LR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWI 274
++ + +R A+ L+HPWI
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 19/252 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G++G V++ D + G A+K+V LE E+L L IV G+
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMAC-------AGLTSPRIVPLYGA 134
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++ ++I +E +E GSL ++K G PE Y+ Q LEGL YLH + ++H D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 146 KGANILTTKEGL-VKLADFGVATKLTE----ADVNTHSVV-GTPYWMAPEVIEMSGVCAA 199
K N+L + +G L DFG A L D+ T + GT MAPEV+ A
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAK 252
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP---IPESLSPDITDFLRQCFK 256
D+WS C ++ +L P+ + P +I E PP IP S +P +++ +
Sbjct: 253 VDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA-SEPPPVREIPPSCAPLTAQAIQEGLR 311
Query: 257 KDARQRPDAKTL 268
K+ R A L
Sbjct: 312 KEPIHRVSAAEL 323
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI---IMQEIDLLKNL 74
++Y EIG GAYG VYK D +G FVA+K V + N + ++E+ LL+ L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 75 N---HKNIVKYLGSLKTRS-----HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
H N+V+ + T + ++ E+V+ + K G P + +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMR 127
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWM 186
Q L GL +LH ++HRD+K NIL T G VKLADFG+A ++ + VV T ++
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-RIYSYQMALTPVVVTLWYR 186
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELL 213
APEV+ S D+WSVGC E+
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 29/271 (10%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 11 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI+ ++G T+ L I+ ++ E SL + + ++ + L+ + Q G+ YLH
Sbjct: 68 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEVIEM 193
+ +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEVI M
Sbjct: 126 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEVIRM 184
Query: 194 SG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD- 249
SD+++ G + EL+T PY + + +V SLSPD++
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR------GSLSPDLSKV 238
Query: 250 ----------FLRQCFKKDARQRPDAKTLLS 270
+ +C KK +RP +L+
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 141/276 (51%), Gaps = 24/276 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PESLV 121
K + HKNI+ LG+ L++I+EY G+L ++ + F P PE +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 122 A----VYIA-QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNT 176
+ V A QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 177 HSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD 234
+ G P WMAPE + SD+WS G + E+ T Y P+ LF+++++
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 235 -ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
R P + + ++ +R C+ QRP K L+
Sbjct: 268 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 3 RQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-L 61
R+ ++ + K D +++ +GKG++G+V + AIK + + + Q+D +
Sbjct: 6 RKQPSNNLDRVKLTDFNFLM--VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDV 63
Query: 62 NIIMQEIDLLKNLNHKNIVKYLGS-LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
M E +L L+ + L S +T L+ ++EYV G L I+ + G F E
Sbjct: 64 ECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQ 121
Query: 121 VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV 180
Y A++ GL +LH++G+I+RD+K N++ EG +K+ADFG+ + V T
Sbjct: 122 AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC 181
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP 240
GTP ++APE+I + D W+ G + E+L PP ++ + LF+ + + P
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP-FDGEDEDELFQSIMEHNVSYP 240
Query: 241 ESLSPDITDFLRQCFKKDARQR 262
+SLS + + K +R
Sbjct: 241 KSLSKEAVSICKGLMTKHPAKR 262
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S +++E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H N++ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 13/260 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDL-LKNLNHKNIVKYL 83
E+G+GAYG V K + +G A+K++ +QE + + ++D+ + ++ V +
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRL-LXDLDISXRTVDCPFTVTFY 99
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQ-GV 140
G+L + I E + + SL K +K PE ++ +++ L +LH + V
Sbjct: 100 GALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI----EMSGV 196
IHRD+K +N+L G VK DFG++ L + DV G + APE I G
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVD-DVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 197 CAASDIWSVGCTVIELLTCVPPYYEL-QPMPALFRIVQDERPPIP-ESLSPDITDFLRQC 254
SDIWS+G T IEL PY P L ++V++ P +P + S + DF QC
Sbjct: 218 SVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC 277
Query: 255 FKKDARQRPDAKTLLSHPWI 274
KK++++RP L HP+
Sbjct: 278 LKKNSKERPTYPELXQHPFF 297
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S +++E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H N++ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 132/271 (48%), Gaps = 29/271 (10%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NI+ ++G T L I+ ++ E SL + + ++ + L+ + Q G+ YLH
Sbjct: 80 VNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDI-ARQTARGMDYLH 137
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEVIEM 193
+ +IHRD+K NI ++ VK+ DFG+AT+ + +H + G+ WMAPEVI M
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEVIRM 196
Query: 194 SG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD- 249
SD+++ G + EL+T PY + + +V SLSPD++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR------GSLSPDLSKV 250
Query: 250 ----------FLRQCFKKDARQRPDAKTLLS 270
+ +C KK +RP +L+
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL VA+K + + + +E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 127
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANI+ + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P+ ++ V+++ PIP E
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEG 245
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GA+G V + A+K +S E I + D +E D++ N +V+
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + +L++++EY+ G L N++ PE Y A+V+ L +H G+IHRD
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDV---PEKWAKFYTAEVVLALDAIHSMGLIHRD 199
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPYWMAPEVIEMSG----VCAA 199
+K N+L K G +KLADFG K+ E V+ + VGTP +++PEV++ G
Sbjct: 200 VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRE 259
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D WSVG + E+L P+Y + + + D + + CF +DA
Sbjct: 260 CDWWSVGVFLFEMLVGDTPFYA-DSLVGTYSKIMDHKNSL--------------CFPEDA 304
Query: 260 RQRPDAKTLL 269
AK L+
Sbjct: 305 EISKHAKNLI 314
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL + VA+K + + + +E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 127
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANI+ + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P ++ V+++ PIP E
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRED--PIPPSARHEG 245
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 121/253 (47%), Gaps = 10/253 (3%)
Query: 26 IGKGAYGRVYKG-LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
IG G +G VYKG L +G VAIK + ++ ++ + E ++ +H NI++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF-LGEAGIMGQFSHHNIIR 110
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
G + + II EY+ENG+L ++ K G F + + + G+ YL +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLR-EKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCA 198
HRD+ NIL + K++DFG++ L + T++ G W APE I +
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229
Query: 199 ASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
ASD+WS G + E++T PY+EL + I R P P I + QC+++
Sbjct: 230 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQ 289
Query: 258 DARQRPDAKTLLS 270
+ +RP ++S
Sbjct: 290 ERARRPKFADIVS 302
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 130/251 (51%), Gaps = 7/251 (2%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
L ++G G +G V+ ++ VA+K + +++ E + E +++K L H +VK
Sbjct: 19 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAF---LAEANVMKTLQHDKLVK 74
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
L ++ T+ ++II E++ GSL + +K ++ P + + AQ+ EG+ ++ ++ I
Sbjct: 75 -LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 133
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE I S
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-DERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G ++E++T Y P + R ++ R P PE+ ++ + + +C+K
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRP 253
Query: 260 RQRPDAKTLLS 270
+RP + + S
Sbjct: 254 EERPTFEYIQS 264
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 139/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
++ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 20/287 (6%)
Query: 7 TSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQE 59
T + +++ Y +G+E+G G + V K G A K + S +++E
Sbjct: 15 TENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSRE 74
Query: 60 DLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPES 119
+ I +E+++L+ + H NI+ + ++ + +ILE V G L + + + E
Sbjct: 75 E---IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTED 129
Query: 120 LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVN 175
++ Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A K+ EA
Sbjct: 130 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNE 188
Query: 176 THSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIV 232
++ GTP ++APE++ + +D+WS+G LL+ P+ + + + + +
Sbjct: 189 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN 248
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
D + S DF+R+ KD ++R L H WI+ RR
Sbjct: 249 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRR 295
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S +++E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H N++ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S +++E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H N++ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI----IMQEIDLL 71
+++ Y +G+E+G G + V K G A K + ++ + I +E+++L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 72 KNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEG 131
+ + H NI+ + ++ + +ILE V G L + + + E ++ Q+L+G
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDG 120
Query: 132 LVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVVGTPYWMA 187
+ YLH + + H D+K NI+ + + +KL DFG+A K+ EA ++ GTP ++A
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIFGTPEFVA 179
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLS 244
PE++ + +D+WS+G LL+ P+ + + + + + D + S
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 245 PDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR 279
DF+R+ KD ++R L H WI+ RR
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 20/277 (7%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENG-----DFVAIKQ--VSLENIAQEDLNII 64
K + +++ Y +G+E+G G + V K + G F+ +Q S +++E+ I
Sbjct: 6 KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---I 62
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +L+ + H N++ + R+ + +ILE V G L + + + E +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
I Q+L+G+ YLH + + H D+K NI+ + + +KL DFG+A ++ E V ++
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIF 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERP 237
GTP ++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI 274
S DF+R+ K+ R+R + L HPWI
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 30/282 (10%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y + G+ VA+K + E + + +EI++L+ L H++IV
Sbjct: 16 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 81 KYLGSLKTRSH--LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + + +++EYV GSL + + + G + + ++ Q+ EG+ YLH Q
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL---AQLLLFAQQICEGMAYLHAQ 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTP-YWMAPEVIEMSG 195
IHR + N+L + LVK+ DFG+A + E +P +W APE ++
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 196 VCAASDIWSVGCTVIELLTCV-------PPYYEL----QPMPALFRIVQ----DERPPIP 240
ASD+WS G T+ ELLT + EL Q + R+ + ER P P
Sbjct: 192 FYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRP 251
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQ 282
+ +I ++ C++ +A RP + L+ P +Q + Q
Sbjct: 252 DRCPCEIYHLMKNCWETEASFRPTFQNLV--PILQTAQEKYQ 291
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL VA+K + + + +E L
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 127
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANI+ + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P+ ++ V+++ PIP E
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEG 245
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 246 LSADLDAVVLKALAKNPENR 265
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 137 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 196 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 255
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 256 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 60
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 118
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 177
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 238 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 289
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L KYM+ +++G+G +G V++ ++ + K V ++ D ++ +EI +L
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT---DQVLVKKEISILNI 57
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLV 133
H+NI+ S ++ L +I E++ + I + F E + Y+ QV E L
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQ 116
Query: 134 YLHEQGVIHRDIKGANIL--TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI 191
+LH + H DI+ NI+ T + +K+ +FG A +L D N + P + APEV
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVH 175
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDIT 248
+ V A+D+WS+G V LL+ + P+ + I+ E E+ +S +
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQ 275
DF+ + K+ + R A L HPW++
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 133 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 251
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 252 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 135/276 (48%), Gaps = 33/276 (11%)
Query: 19 KYMLGDEIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
KY+ ++GKG +G V Y L G VA+KQ L++ + +EI +LK L
Sbjct: 13 KYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 68
Query: 75 NHKNIVKYLGSL--KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ IVKY G R L +++EY+ +G L + ++ ++ S + +Y +Q+ +G+
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGM 127
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP-----YWMA 187
YL + +HRD+ NIL E VK+ADFG+A KL D + + VV P +W A
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYY-VVREPGQSPIFWYA 185
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLT-----CVPPYYELQPM------PALFR----IV 232
PE + + SD+WS G + EL T C P L+ M PAL R +
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLE 245
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTL 268
+ +R P P + ++ + ++ C+ + RP L
Sbjct: 246 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 140 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 199 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 258
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 259 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 135/276 (48%), Gaps = 33/276 (11%)
Query: 19 KYMLGDEIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
KY+ ++GKG +G V Y L G VA+KQ L++ + +EI +LK L
Sbjct: 14 KYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 69
Query: 75 NHKNIVKYLGSL--KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ IVKY G R L +++EY+ +G L + ++ ++ S + +Y +Q+ +G+
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGM 128
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP-----YWMA 187
YL + +HRD+ NIL E VK+ADFG+A KL D + + VV P +W A
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYY-VVREPGQSPIFWYA 186
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLT-----CVPPYYELQPM------PALFR----IV 232
PE + + SD+WS G + EL T C P L+ M PAL R +
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLE 246
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTL 268
+ +R P P + ++ + ++ C+ + RP L
Sbjct: 247 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEIDLLKN 73
T+D+ + +G +GKG +G VY + ++ VA+K + I +E + + + +EI++ +
Sbjct: 21 TIDD-FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLV 133
L+H NI++ R +++ILEY G L ++ K F E A + ++ + L+
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ--KSCTFDEQRTATIMEELADALM 137
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEM 193
Y H + VIHRDIK N+L +G +K+ADFG + + ++ GT ++ PE+IE
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVH--APSLRRKTMCGTLDYLPPEMIEG 195
Query: 194 SGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQ 253
D+W +G ELL PP+ RIV+ + P S+ D + +
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL-KFPASVPTGAQDLISK 254
Query: 254 CFKKDARQRPDAKTLLSHPWIQ-NCRRALQSS 284
+ + +R + +HPW++ N RR L S
Sbjct: 255 LLRHNPSERLPLAQVSAHPWVRANSRRVLPPS 286
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 4 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 60
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 118
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 177
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 238 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 289
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++++ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+G +G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 139
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 200 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 318 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 141 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 200 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 259
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 260 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 135/276 (48%), Gaps = 33/276 (11%)
Query: 19 KYMLGDEIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
KY+ ++GKG +G V Y L G VA+KQ L++ + +EI +LK L
Sbjct: 26 KYI--SQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKAL 81
Query: 75 NHKNIVKYLGSLKT--RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+ IVKY G R L +++EY+ +G L + ++ ++ S + +Y +Q+ +G+
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGM 140
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP-----YWMA 187
YL + +HRD+ NIL E VK+ADFG+A KL D + + VV P +W A
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDYY-VVREPGQSPIFWYA 198
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLT-----CVPPYYELQPM------PALFR----IV 232
PE + + SD+WS G + EL T C P L+ M PAL R +
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTL 268
+ +R P P + ++ + ++ C+ + RP L
Sbjct: 259 EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GA+G V A+K +S E I + D +E D++ N +V+
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + +L++++EY+ G L N++ PE Y A+V+ L +H G IHRD
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEVVLALDAIHSMGFIHRD 193
Query: 145 IKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIEMSG----VCAA 199
+K N+L K G +KLADFG K+ E V + VGTP +++PEV++ G
Sbjct: 194 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 200 SDIWSVGCTVIELLTCVPPYY 220
D WSVG + E+L P+Y
Sbjct: 254 CDWWSVGVFLYEMLVGDTPFY 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 17/260 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNL 74
L ++Y LG+ +G G V+ DL VA+K + + + +E L
Sbjct: 27 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 86
Query: 75 NHKNIVKYLGSLKTRSHL----HIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
NH IV + + + +I++EYV+ +L +I+ + GP IA +
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV--HTEGPMTPKRAIEVIADACQ 144
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVGTPYWMA 187
L + H+ G+IHRD+K ANI+ + VK+ DFG+A + ++ T +V+GT +++
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP-----ES 242
PE V A SD++S+GC + E+LT PP+ P+ ++ V+++ PIP E
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED--PIPPSARHEG 262
Query: 243 LSPDITDFLRQCFKKDARQR 262
LS D+ + + K+ R
Sbjct: 263 LSADLDAVVLKALAKNPENR 282
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GA+G V A+K +S E I + D +E D++ N +V+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + +L++++EY+ G L N++ PE Y A+V+ L +H G IHRD
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 145 IKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIEMSG----VCAA 199
+K N+L K G +KLADFG K+ E V + VGTP +++PEV++ G
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 200 SDIWSVGCTVIELLTCVPPYY 220
D WSVG + E+L P+Y
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFY 279
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 72 KNLN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 189 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 248 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 308 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+G YG V+K + E + VA+K+V L++ + + ++EI LLK L HKN
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV+ L + L ++ E+ + N G +V ++ Q+L+GL + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
V+HRD+K N+L + G +KLADFG+A + V T ++ P+V+ + + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 199 AS-DIWSVGCTVIELLTCVPPYYELQ----PMPALFRIV----QDERPPI-------PES 242
S D+WS GC EL P + + +FR++ +++ P + P
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 243 LSPDIT--------------DFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ P T D L+ K + QR A+ L HP+ +
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 26/277 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLENGDFVAIKQVSL--ENIAQEDLNIIMQEIDLL 71
++ +LG +G+GA+G+V GLD + + V V + + ++DL+ ++ E++++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 72 KNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PES-- 119
K + HKNI+ LG+ L++I+EY G+L ++ + + P PE
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 120 ----LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
LV+ QV G+ YL + IHRD+ N+L T++ ++K+ADFG+A + D
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 176 THSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++++
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 266
Query: 234 D-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+ R P + + ++ +R C+ QRP K L+
Sbjct: 267 EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/269 (29%), Positives = 137/269 (50%), Gaps = 15/269 (5%)
Query: 17 DNKYMLGD-EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
D +++ D EIG+G++ VYKGLD E VA ++ + + + +E + LK L
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 76 HKNIVKYLGS----LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEG 131
H NIV++ S +K + + ++ E +G+L +K +F ++ + Q+L+G
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK--RFKVXKIKVLRSWCRQILKG 141
Query: 132 LVYLHEQG--VIHRDIKGANI-LTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L +LH + +IHRD+K NI +T G VK+ D G+AT L A +V+GTP + AP
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-LKRASF-AKAVIGTPEFXAP 199
Query: 189 EVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPP--IPESLSPD 246
E E + D+++ G +E T PY E Q ++R V P + P+
Sbjct: 200 EXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ + + C +++ +R K LL+H + Q
Sbjct: 259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+G +G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 85
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 146 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 264 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GA+G V A+K +S E I + D +E D++ N +V+
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + +L++++EY+ G L N++ PE Y A+V+ L +H G IHRD
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEVVLALDAIHSMGFIHRD 198
Query: 145 IKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIEMSG----VCAA 199
+K N+L K G +KLADFG K+ E V + VGTP +++PEV++ G
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 200 SDIWSVGCTVIELLTCVPPYY 220
D WSVG + E+L P+Y
Sbjct: 259 CDWWSVGVFLYEMLVGDTPFY 279
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 7/242 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 74
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II+E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 203 WSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
W+ G + E+ T + PY + P + +D R PE + + +R C++ +
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 262 RP 263
RP
Sbjct: 254 RP 255
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + N++ E +QE ++K L H+ +V+ L
Sbjct: 192 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGNMSPE---AFLQEAQVMKKLRHEKLVQ-L 245
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 303
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+ + + + P W APE S
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 423
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 424 EERPTFEYL 432
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 105 bits (263), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/282 (28%), Positives = 139/282 (49%), Gaps = 30/282 (10%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y + G+ VA+K + E + + +EI++L+ L H++IV
Sbjct: 15 DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 81 KYLGSLKTRSH--LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + + +++EYV GSL + + + G + + ++ Q+ EG+ YLH Q
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG---LAQLLLFAQQICEGMAYLHAQ 130
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTP-YWMAPEVIEMSG 195
IHR + N+L + LVK+ DFG+A + E +P +W APE ++
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 196 VCAASDIWSVGCTVIELLTCV-------PPYYEL----QPMPALFRIVQ----DERPPIP 240
ASD+WS G T+ ELLT + EL Q + R+ + ER P P
Sbjct: 191 FYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRP 250
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQ 282
+ +I ++ C++ +A RP + L+ P +Q + Q
Sbjct: 251 DRCPCEIYHLMKNCWETEASFRPTFQNLV--PILQTAQEKYQ 290
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+G +G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 82
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 143 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 261 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+G +G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 80
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+EY G+L ++ P +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 141 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 259 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 35 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 92 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 146
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT+ + +H + G+ WMAPEV
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEV 205
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 259
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+ Y G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 129/253 (50%), Gaps = 21/253 (8%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
L ++G G +G V+ ++ VA+K + +++ E + E +++K L H +VK
Sbjct: 186 LEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAF---LAEANVMKTLQHDKLVK 241
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
L ++ T+ ++II E++ GSL + +K ++ P + + AQ+ EG+ ++ ++ I
Sbjct: 242 -LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 300
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCA 198
HRD++ ANIL + + K+ADFG+A VG + W APE I
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR------------VGAKFPIKWTAPEAINFGSFTI 348
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ-DERPPIPESLSPDITDFLRQCFKK 257
SD+WS G ++E++T Y P + R ++ R P PE+ ++ + + +C+K
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKN 408
Query: 258 DARQRPDAKTLLS 270
+RP + + S
Sbjct: 409 RPEERPTFEYIQS 421
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 27 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 84 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 138
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT+ + +H + G+ WMAPEV
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEV 197
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 198 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 251
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 74
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 203 WSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
W+ G + E+ T + PY + P + +D R PE + + +R C++ +
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 262 RP 263
RP
Sbjct: 254 RP 255
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++ED ++E +++ L+H +V+ G
Sbjct: 14 EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYG 69
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 129 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 240
Query: 255 FKKDARQRPDAKTLL 269
+K+ RP LL
Sbjct: 241 WKERPEDRPAFSRLL 255
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 274 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQ-L 327
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 385
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 505
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 506 EERPTFEYL 514
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 28/301 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV 294
E +L+ DF+R+ KD ++R + L HPWI+ + Q +L + N+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKP--KDTQQALSRKASAVNM 293
Query: 295 E 295
E
Sbjct: 294 E 294
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLDLEN---GDFVAIKQVSLENIAQEDLNIIMQEIDL 70
+K LG +G+GA+G+V G+D + VA+K + ++ ++DL+ ++ E+++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEM 93
Query: 71 LKNLN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK----------------PNKF 113
+K + HKNI+ LG+ L++I+ Y G+L ++ P +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
F + + Y Q+ G+ YL Q IHRD+ N+L T+ ++K+ADFG+A + D
Sbjct: 154 MTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
+ G P WMAPE + SD+WS G + E+ T Y P+ LF++
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 232 VQD-ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
+++ R P + + ++ +R C+ QRP K L+
Sbjct: 272 LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 28/301 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV 294
E +L+ DF+R+ KD ++R + L HPWI+ + Q +L + N+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKP--KDTQQALSRKASAVNM 293
Query: 295 E 295
E
Sbjct: 294 E 294
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 33/278 (11%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GA+G+V K + + + AIK++ +E L+ I+ E+ LL +LNH+ +V+Y +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 86 -------------LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+K +S L I EY EN +L ++I + ++ Q+LE L
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEAL 129
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEA-DV-------------NTHS 178
Y+H QG+IHR++K NI + VK+ DFG+A + + D+ N S
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 179 VVGTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERP 237
+GT ++A EV++ +G D +S+G E + E + R V E P
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFP 249
Query: 238 PIPESLSPDI-TDFLRQCFKKDARQRPDAKTLLSHPWI 274
P + + +R D +RP A+TLL+ W+
Sbjct: 250 PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I++EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 28/301 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV 294
E +L+ DF+R+ KD ++R + L HPWI+ + Q +L + N+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKP--KDTQQALSRKASAVNM 293
Query: 295 E 295
E
Sbjct: 294 E 294
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 22/299 (7%)
Query: 13 SKTLDNKYMLGDE-IGKGAYGRVYKGLDLENG---DFVAIKQVSLENIAQEDLNIIMQEI 68
+K +D Y+ +E IG G +G V +G G VAIK + + + E
Sbjct: 10 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRREFLSEA 68
Query: 69 DLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
++ H NI++ G + + I+ E++ENG+L + ++ N G F + + +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGI 127
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTE--ADVNTHSVVGTPY-- 184
G+ YL E +HRD+ NIL + K++DFG++ L E +D S +G
Sbjct: 128 ASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
W APE I +ASD WS G + E+++ PY+++ + I QD R P P
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD 247
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV-EENGSA 300
+ + C++KD RP ++S AL +R+ +++ V ENG A
Sbjct: 248 CPTSLHQLMLDCWQKDRNARPRFPQVVS---------ALDKMIRNPASLKIVARENGGA 297
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++ED ++E +++ L+H +V+ G
Sbjct: 14 EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYG 69
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 129 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 240
Query: 255 FKKDARQRPDAKTLL 269
+K+ RP LL
Sbjct: 241 WKERPEDRPAFSRLL 255
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++ED ++E +++ L+H +V+ G
Sbjct: 12 EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYG 67
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 127 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 238
Query: 255 FKKDARQRPDAKTLL 269
+K+ RP LL
Sbjct: 239 WKERPEDRPAFSRLL 253
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 34 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 91 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 145
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 204
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 205 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 258
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 144/302 (47%), Gaps = 28/302 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV 294
E +L+ DF+R+ KD ++R + L HPWI+ + Q +L + N+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKP--KDTQQALSRKASAVNM 293
Query: 295 EE 296
E+
Sbjct: 294 EK 295
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
++ Y L + IG+G++G V + ++ G + + ED++ QEI+++K+L+
Sbjct: 24 INQYYTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NI++ + + + +++++E G L + + F ES A + VL + Y
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYC 139
Query: 136 HEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
H+ V HRD+K N L + + +KL DFG+A + + + VGTPY+++P+V+E
Sbjct: 140 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQVLE 198
Query: 193 -MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPE----SLSPDI 247
+ G D WS G + LL PP+ + +I ++ PE ++SP
Sbjct: 199 GLYG--PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-REGTFTFPEKDWLNVSPQA 255
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
+R+ K +QR + L H W + + L SS R+
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFE---KQLSSSPRN 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 35 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 92 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 146
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 205
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 206 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 259
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 82 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 139
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHXVMQEHRKVPFAWCAPESLK 197
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 257
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 258 MVQCWAHKPEDRP 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II+E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II+E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 201 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 257 KDARQRP 263
+ RP
Sbjct: 256 WNPSDRP 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II+E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I++EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 104 bits (259), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 64 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 118
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT+ + +H + G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-GSHQFEQLSGSILWMAPEV 177
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 231
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 19/280 (6%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
++ Y L + IG+G++G V + ++ G + + ED++ QEI+++K+L+
Sbjct: 7 INQYYTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
H NI++ + + + +++++E G L + + F ES A + VL + Y
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYC 122
Query: 136 HEQGVIHRDIKGANIL---TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIE 192
H+ V HRD+K N L + + +KL DFG+A + + + VGTPY+++P+V+E
Sbjct: 123 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKVGTPYYVSPQVLE 181
Query: 193 -MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPE----SLSPDI 247
+ G D WS G + LL PP+ + +I ++ PE ++SP
Sbjct: 182 GLYG--PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI-REGTFTFPEKDWLNVSPQA 238
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
+R+ K +QR + L H W + + L SS R+
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFE---KQLSSSPRN 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 133/275 (48%), Gaps = 14/275 (5%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI----IMQE 67
+ + +++ Y +G+E+G G + V K G A K + ++ + I +E
Sbjct: 6 RQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
Query: 68 IDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
+++L+ + H NI+ + ++ + +ILE V G L + + + E ++ Q
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQ 123
Query: 128 VLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVVGTP 183
+L+G+ YLH + + H D+K NI+ + + +KL DFG+A K+ EA ++ GTP
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNIFGTP 182
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIP 240
++APE++ + +D+WS+G LL+ P+ + + + + + D
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 242
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ S DF+R+ KD ++R L H WI+
Sbjct: 243 SNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 77
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II+E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 197 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 251
Query: 257 KDARQRP 263
+ RP
Sbjct: 252 WNPSDRP 258
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 76 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 133
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYVMQEHRKVPFAWCAPESLK 191
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 251
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 252 MVQCWAHKPEDRP 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++++D ++E +++ L+H +V+ G
Sbjct: 34 EIGSGQFGLVHLGYWL-NKDKVAIKTIKEGSMSEDDF---IEEAEVMMKLSHPKLVQLYG 89
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRD 148
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 149 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 260
Query: 255 FKKDARQRPDAKTLL 269
+K+ RP LL
Sbjct: 261 WKERPEDRPAFSRLL 275
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 155
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 216 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 275
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 276 KAEMRPSFSELVS 288
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 12 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 65
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 66 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 123
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 243
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 244 ERPEDRPTFDYLRS 257
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 174
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 234
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 235 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 294
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 295 KAEMRPSFSELVS 307
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 125/255 (49%), Gaps = 13/255 (5%)
Query: 21 MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+LG++IG+G +G V+ G + VA+K E + + +QE +LK +H NIV
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ +G + ++I++E V+ G ++ ++L+ + + G+ YL +
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM-VGDAAAGMEYLESKCC 234
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG----TPY-WMAPEVIEMSG 195
IHRD+ N L T++ ++K++DFG++ + EAD ++ G P W APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE--EAD-GVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 196 VCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD-ITDFLRQ 253
+ SD+WS G + E + PY L + + R P PE L PD + + Q
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE-LCPDAVFRLMEQ 350
Query: 254 CFKKDARQRPDAKTL 268
C+ + QRP T+
Sbjct: 351 CWAYEPGQRPSFSTI 365
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 76 NLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 133
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYVMQEHRKVPFAWCAPESLK 191
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 251
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 252 MVQCWAHKPEDRP 264
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 191 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQ-L 244
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 302
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 423 EERPTFEYL 431
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 28/301 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNV 294
E +L+ DF+R+ KD ++R + L HPWI+ + Q +L + N+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKP--KDTQQALSRKASAVNM 293
Query: 295 E 295
E
Sbjct: 294 E 294
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 72 NLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHXVMQEHRKVPFAWCAPESLK 187
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 248 MVQCWAHKPEDRP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 82 NLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 139
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYVMQEHRKVPFAWCAPESLK 197
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 257
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 258 MVQCWAHKPEDRP 270
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 28/295 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +I E V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWI--QNCRRALQSSLRH 287
E +L+ DF+R+ KD ++R + L HPWI ++ ++AL S+ H
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSH 290
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 191 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQ-L 244
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 302
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 423 EERPTFEYL 431
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 27 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 80
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 81 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 138
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 258
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 259 ERPEDRPTFDYLRS 272
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 156
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 276
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 277 KAEMRPSFSELVS 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 154
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 215 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 274
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 275 KAEMRPSFSELVS 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 11/254 (4%)
Query: 21 MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+LG++IG+G +G V+ G + VA+K E + + +QE +LK +H NIV
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ +G + ++I++E V+ G ++ ++L+ + + G+ YL +
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM-VGDAAAGMEYLESKCC 234
Query: 141 IHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG---TPY-WMAPEVIEMSGV 196
IHRD+ N L T++ ++K++DFG++ + EAD + G P W APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE--EADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 197 CAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD-ITDFLRQC 254
+ SD+WS G + E + PY L + + R P PE L PD + + QC
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE-LCPDAVFRLMEQC 351
Query: 255 FKKDARQRPDAKTL 268
+ + QRP T+
Sbjct: 352 WAYEPGQRPSFSTI 365
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 23 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 77 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 134
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 254
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 255 ERPEDRPTFDYLRS 268
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 72 NLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYVMQEHRKVPFAWCAPESLK 187
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 248 MVQCWAHKPEDRP 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 22 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 76 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 253
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 254 ERPEDRPTFDYLRS 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 201 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 257 KDARQRP 263
+ RP
Sbjct: 256 WNPSDRP 262
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 156
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 276
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 277 KAEMRPSFSELVS 289
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 12 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 69 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 123
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 182
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 236
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 175
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 235
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 236 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 295
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 296 KAEMRPSFSELVS 308
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 151
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 212 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 271
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 272 KAEMRPSFSELVS 284
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 148
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 208
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 209 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 268
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 269 KAEMRPSFSELVS 281
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 17 LVERLGAGQAGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 71 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + +A+ P W APE I
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 249 ERPEDRPTFDYLRS 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 25 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 78
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 79 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 136
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 256
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 257 ERPEDRPTFDYLRS 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 18 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 71
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 72 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 129
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 249
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 250 ERPEDRPTFDYLRS 263
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V+KG+ + G+ + I +V + ++ + + + +L+H +IV+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG L S L ++ +Y+ GSL + ++ ++ G L+ + Q+ +G+ YL E G++H
Sbjct: 99 LG-LCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVH 156
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVN-THSVVGTPY-WMAPEVIEMSGVCAAS 200
R++ N+L V++ADFGVA L D +S TP WMA E I S
Sbjct: 157 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 216
Query: 201 DIWSVGCTVIELLTC-VPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
D+WS G TV EL+T PY L +P L + ER P+ + D+ + +C+
Sbjct: 217 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMI 274
Query: 258 DARQRPDAKTL 268
D RP K L
Sbjct: 275 DENIRPTFKEL 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 153
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 213
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 214 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 273
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 274 KAEMRPSFSELVS 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 19 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 72
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 73 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 130
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 250
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 251 ERPEDRPTFDYLRS 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 71 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 249 ERPEDRPTFDYLRS 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 12 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 69 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 123
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 182
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 236
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 237 SKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 23 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 76
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 77 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 134
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 254
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 255 ERPEDRPTFDYLRS 268
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ YL + +H
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKYLASKKFVH 155
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEAD-VNTHSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + + H+ G WMA E ++
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 215
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 216 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 275
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 276 KAEMRPSFSELVS 288
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 9 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 65
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 66 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 120
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 179
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 233
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 234 SKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++ED ++E +++ L+H +V+ G
Sbjct: 17 EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYG 72
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 132 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 243
Query: 255 FKKDARQRPDAKTLL 269
+++ RP LL
Sbjct: 244 WRERPEDRPAFSRLL 258
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 71 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 249 ERPEDRPTFDYLRS 262
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 132/253 (52%), Gaps = 15/253 (5%)
Query: 22 LGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHK 77
L +++G G++G V +G D +G V A+K + + ++Q E ++ ++E++ + +L+H+
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
N+++ G + T + ++ E GSL + ++ ++ G F ++ Y QV EG+ YL
Sbjct: 72 NLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLES 129
Query: 138 QGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV----GTPY-WMAPEVIE 192
+ IHRD+ N+L LVK+ DFG+ L + D H V+ P+ W APE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND--DHYVMQEHRKVPFAWCAPESLK 187
Query: 193 MSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDF 250
ASD W G T+ E+ T P+ L L +I ++ ER P PE DI +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247
Query: 251 LRQCFKKDARQRP 263
+ QC+ RP
Sbjct: 248 MVQCWAHKPEDRP 260
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 70
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 71 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 249 ERPEDRPTFDYLRS 262
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 26/281 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
E +L+ DF+R+ KD ++R + L HPWI+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G +G VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 74
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 203 WSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
W+ G + E+ T + PY + P + +D R PE + + +R C++ +
Sbjct: 194 WAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSD 253
Query: 262 RP 263
RP
Sbjct: 254 RP 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 11/247 (4%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G L + FVAIK + ++ + E ++ +H N++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + + II E++ENGSL + ++ N G F + + + G+ YL + +H
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVH 158
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTE--ADVNTHSVVGTPY---WMAPEVIEMSGVC 197
RD+ NIL + K++DFG++ L + +D S +G W APE I+
Sbjct: 159 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 218
Query: 198 AASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
+ASD+WS G + E+++ PY+++ + I QD R P P + + C++
Sbjct: 219 SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 278
Query: 257 KDARQRP 263
KD RP
Sbjct: 279 KDRNHRP 285
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 16/289 (5%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLK 72
K ++ +Y + D++G G VY D VAIK + + +E+ L +E+
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L+H+NIV + + ++++EY+E +L+ I+ + GP + Q+L+G+
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGI 124
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-THSVVGTPYWMAPEVI 191
+ H+ ++HRDIK NIL +K+ DFG+A L+E + T+ V+GT + +PE
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI---- 247
+ +DI+S+G + E+L PP+ + + +QD P + + DI
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL 244
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNVEE 296
++ + + +KD R + IQ + L S L + +V E
Sbjct: 245 SNVILRATEKDKANR--------YKTIQEMKDDLSSVLHENRANEDVYE 285
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 157
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 218 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 277
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 278 KAEMRPSFSELVS 290
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 201 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 257 KDARQRP 263
+ RP
Sbjct: 256 WNPSDRP 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 201 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 257 KDARQRP 263
+ RP
Sbjct: 256 WNPSDRP 262
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
KY ++IG+G YG V+K + E + VA+K+V L++ + + ++EI LLK L HKN
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IV+ L + L ++ E+ + N G +V ++ Q+L+GL + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
V+HRD+K N+L + G +KLA+FG+A + V T ++ P+V+ + + +
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 199 AS-DIWSVGCTVIELLTCVPPYYELQ----PMPALFRIV----QDERPPI-------PES 242
S D+WS GC EL P + + +FR++ +++ P + P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 243 LSPDIT--------------DFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ P T D L+ K + QR A+ L HP+ +
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 26 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 79
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 80 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 137
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHRD++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 257
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 258 ERPEDRPTFDYLRS 271
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 157
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 217
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 218 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 277
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 278 KAEMRPSFSELVS 290
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 81
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 201 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 255
Query: 257 KDARQRP 263
+ RP
Sbjct: 256 WNPSDRP 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 80
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 139
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 200 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 254
Query: 257 KDARQRP 263
+ RP
Sbjct: 255 WNPSDRP 261
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V+KG+ + G+ + I +V + ++ + + + +L+H +IV+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG L S L ++ +Y+ GSL + ++ ++ G L+ + Q+ +G+ YL E G++H
Sbjct: 81 LG-LCPGSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVH 138
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVN-THSVVGTPY-WMAPEVIEMSGVCAAS 200
R++ N+L V++ADFGVA L D +S TP WMA E I S
Sbjct: 139 RNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 201 DIWSVGCTVIELLTC-VPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
D+WS G TV EL+T PY L +P L + ER P+ + D+ + +C+
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMI 256
Query: 258 DARQRPDAKTL 268
D RP K L
Sbjct: 257 DENIRPTFKEL 267
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 156
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 276
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 277 KAEMRPSFSELVS 289
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 322
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 381
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
++ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 442 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 496
Query: 257 KDARQRP 263
+ RP
Sbjct: 497 WNPSDRP 503
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 161
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 221
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 222 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 281
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 282 KAEMRPSFSELVS 294
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 78
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 198 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 257 KDARQRP 263
+ RP
Sbjct: 253 WNPSDRP 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 16 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 69
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 127
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 247
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 248 EERPTFEYL 256
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats.
Identities = 82/270 (30%), Positives = 131/270 (48%), Gaps = 31/270 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++GKG +G V Y L G VA+KQ L++ + +EI +LK L+ IV
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 81 KYLGSL--KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G R L +++EY+ +G L + ++ ++ S + +Y +Q+ +G+ YL +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR 130
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTP-----YWMAPEVIEM 193
+HRD+ NIL E VK+ADFG+A KL D + VV P +W APE +
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDX-XVVREPGQSPIFWYAPESLSD 188
Query: 194 SGVCAASDIWSVGCTVIELLT-----CVPPYYELQPM------PALFR----IVQDERPP 238
+ SD+WS G + EL T C P L+ M PAL R + + +R P
Sbjct: 189 NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLP 248
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTL 268
P + ++ + ++ C+ + RP L
Sbjct: 249 APPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 215
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 276 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 335
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 336 KAEMRPSFSELVS 348
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 78
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 198 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 252
Query: 257 KDARQRP 263
+ RP
Sbjct: 253 WNPSDRP 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 14 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 67
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 125
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 245
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 246 EERPTFEYL 254
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 89
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 148
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 149 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 209 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 263
Query: 257 KDARQRP 263
+ RP
Sbjct: 264 WNPSDRP 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 191 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQ-L 244
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 302
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 422
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 423 EERPTFEYL 431
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 283
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-SAVVLLYMATQISSAMEYLEKKNFIHR 342
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
++ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 403 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 457
Query: 257 KDARQRP 263
+ RP
Sbjct: 458 WNPSDRP 464
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 26/281 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
E +L+ DF+R+ KD ++R + L HPWI+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 154
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 214
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 215 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 274
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 275 KAEMRPSFSELVS 287
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 130/268 (48%), Gaps = 16/268 (5%)
Query: 17 DNKYMLGDEIGKGAYGRVYKG-LDLENGDFV--AIKQVSLENIAQEDLNIIMQEIDLLKN 73
+ ++ LG +GKG +G V + L E+G FV A+K + + IA D+ ++E +K
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKE 81
Query: 74 LNHKNIVKYLG-SLKTRSHLH-----IILEYVENGSLANIIKPNKFG--PF--PESLVAV 123
+H ++ K +G SL++R+ +IL ++++G L + ++ G PF P +
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT- 182
++ + G+ YL + IHRD+ N + ++ V +ADFG++ K+ D
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 183 -PYWMAPEVIEMSGVCAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIP 240
W+A E + + SD+W+ G T+ E++T PY ++ ++ R P
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP 261
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTL 268
++ D + QC+ D +QRP L
Sbjct: 262 PECMEEVYDLMYQCWSADPKQRPSFTCL 289
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T+ L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 64 VNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 118
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 177
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 231
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 26/281 (9%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV-------SLENIAQEDLNII 64
+ + +D+ Y G+E+G G + V K + G A K + S +++ED I
Sbjct: 5 RQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---I 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ +LK + H N++ + ++ + +ILE V G L + + + E +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGL----VKLADFGVATKLTEADVNTHSVV 180
+ Q+L G+ YLH + H D+K NI+ + +K+ DFG+A K+ + ++
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-EFKNIF 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYY------ELQPMPALFRIVQD 234
GTP ++APE++ + +D+WS+G LL+ P+ L + A+ +D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
E +L+ DF+R+ KD ++R + L HPWI+
Sbjct: 239 EYFSNTSALA---KDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 280
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 339
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
++ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 400 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 454
Query: 257 KDARQRP 263
+ RP
Sbjct: 455 WNPSDRP 461
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ--EDLNIIMQEIDLLKNL-NHKNIVKY 82
IG+G+Y +V + L+ D + +V + + ED++ + E + + NH +V
Sbjct: 60 IGRGSYAKVLL-VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+T S L ++EYV G L ++ + PE Y A++ L YLHE+G+I+
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K N+L EG +KL D+G+ + T + GTP ++APE++ + D
Sbjct: 177 RDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 236
Query: 203 WSVGCTVIELLTCVPPYY--------ELQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
W++G + E++ P+ + LF+++ +++ IP SLS L+
Sbjct: 237 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 296
Query: 255 FKKDARQRPDA------KTLLSHPWIQN 276
KD ++R + HP+ +N
Sbjct: 297 LNKDPKERLGCHPQTGFADIQGHPFFRN 324
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+G +G VY G L+N G + SL I +++ + E ++K+ +H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 84 G-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G L++ ++L Y+++G L N I+ P + L+ + QV +G+ +L + +H
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVH 156
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNT-HSVVGTPY---WMAPEVIEMSGVCA 198
RD+ N + ++ VK+ADFG+A + + + ++ H+ G WMA E ++
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 216
Query: 199 ASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
SD+WS G + EL+T PPY ++ ++Q R PE + + + +C+
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHP 276
Query: 258 DARQRPDAKTLLS 270
A RP L+S
Sbjct: 277 KAEMRPSFSELVS 289
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 76
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + LVK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + + +++ D R PE + + +R C++
Sbjct: 196 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 250
Query: 257 KDARQRP 263
+ RP
Sbjct: 251 WNPSDRP 257
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 126/255 (49%), Gaps = 23/255 (9%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
EIG G +G V+ G L N D VAIK + +++ED ++E +++ L+H +V+ G
Sbjct: 15 EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDF---IEEAEVMMKLSHPKLVQLYG 70
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++ E++E+G L++ ++ + G F + V EG+ YL E VIHRD
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L + ++K++DFG+ T+ D T S GT + W +PEV S + SD
Sbjct: 130 LAARNCLVGENQVIKVSDFGM-TRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 202 IWSVGCTVIELLTCVPPYYE-------LQPMPALFRIVQDERPPIPESLSPDITDFLRQC 254
+WS G + E+ + YE ++ + FR+ + P S + + C
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK------PRLASTHVYQIMNHC 241
Query: 255 FKKDARQRPDAKTLL 269
+++ RP LL
Sbjct: 242 WRERPEDRPAFSRLL 256
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 19/284 (6%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVY---KGLDLENGDFVAIKQVSLENIAQEDLNI--IM 65
H K + L +G GAYG+V+ K + G A+K + I Q+
Sbjct: 47 HAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTR 106
Query: 66 QEIDLLKNLNHKNIVKYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
E +L+++ + L + +T + LH+IL+Y+ G L + + F E V +Y
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIY 164
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-THSVVGTP 183
+ +++ L +LH+ G+I+RDIK NIL G V L DFG++ + + + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 184 YWMAPEVIEM--SGVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPP 238
+MAP+++ SG A D WS+G + ELLT P+ E + R + PP
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
Query: 239 IPESLSPDITDFLRQCFKKDARQR-----PDAKTLLSHPWIQNC 277
P+ +S D +++ KD ++R DA + H + Q
Sbjct: 285 YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G++G V++ D + G A+K+V LE E+L L+ IV G+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVAC-------AGLSSPRIVPLYGA 118
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++ ++I +E +E GSL +IK + G PE Y+ Q LEGL YLH + ++H D+
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 146 KGANILTTKEG-LVKLADFGVAT-----KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
K N+L + +G L DFG A L ++ + + GT MAPEV+ A
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ--DERPPIPESLSPDITDFLRQCFKK 257
DIWS C ++ +L P+ + P +I IP S +P +++ +K
Sbjct: 237 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRK 296
Query: 258 DARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRN 293
+ R A L RR + +L+ G +++
Sbjct: 297 EPVHRASAMEL---------RRKVGKALQEVGGLKS 323
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K + H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKIRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 20/252 (7%)
Query: 21 MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
ML IG G++G VYKG +GD VA+K + + + E E+ +L+ H NI+
Sbjct: 39 MLSTRIGSGSFGTVYKGK--WHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
++G + T+ +L I+ ++ E SL ++ KF F +A Q +G+ YLH +
Sbjct: 96 LFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIA---RQTAQGMDYLHAK 151
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTE--ADVNTHSVVGTPYWMAPEVIEMSG- 195
+IHRD+K NI + VK+ DFG+AT + G+ WMAPEVI M
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 196 --VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQ 253
SD++S G + EL+T PY + + +V SPD++ +
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA------SPDLSKLYKN 265
Query: 254 CFKKDARQRPDA 265
C K R D
Sbjct: 266 CPKAMKRLVADC 277
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNL-NHKNIVKYL 83
IG+G+Y +V + A+K V E + ED++ + E + + NH +V
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+T S L ++EYV G L ++ + PE Y A++ L YLHE+G+I+R
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYR 145
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N+L EG +KL D+G+ + T GTP ++APE++ + D W
Sbjct: 146 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 205
Query: 204 SVGCTVIELLTCVPPYY--------ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
++G + E++ P+ + LF+++ +++ IP S+S L+
Sbjct: 206 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAASVLKSFL 265
Query: 256 KKDARQRPDA------KTLLSHPWIQN 276
KD ++R + HP+ +N
Sbjct: 266 NKDPKERLGCLPQTGFADIQGHPFFRN 292
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y+ D++G+G Y VYKG + VA+K++ LE+ I +E+ LLK+L H NI
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANI 62
Query: 80 VKYLGSLKTRSHLHIILEYVENG------SLANIIKPNKFGPFPESLVAVYIAQVLEGLV 133
V + T L ++ EY++ NII + V +++ Q+L GL
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN--------VKLFLFQLLRGLA 114
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEM 193
Y H Q V+HRD+K N+L + G +KLADFG+A + + V T ++ P+++
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 194 SGVCAAS-DIWSVGCTVIELLTCVPPY 219
S + D+W VGC E+ T P +
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD+ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNL-NHKNIVKYL 83
IG+G+Y +V + A+K V E + ED++ + E + + NH +V
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+T S L ++EYV G L ++ + PE Y A++ L YLHE+G+I+R
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYR 130
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N+L EG +KL D+G+ + T GTP ++APE++ + D W
Sbjct: 131 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 190
Query: 204 SVGCTVIELLTCVPPYY--------ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
++G + E++ P+ + LF+++ +++ IP SLS L+
Sbjct: 191 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL 250
Query: 256 KKDARQR 262
KD ++R
Sbjct: 251 NKDPKER 257
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats.
Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 13/244 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPN--KFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I++EY+ G L + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRP 263
+RP
Sbjct: 257 EERP 260
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 21/222 (9%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQEIDLLKN 73
T ++ ++L D +G+GA V++G + GD AIK NI+ +++ M+E ++LK
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKK 63
Query: 74 LNHKNIVKYLG--SLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVL 129
LNHKNIVK T H +I+E+ GSL +++ N +G PES + + V+
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVV 122
Query: 130 EGLVYLHEQGVIHRDIKGANILTT----KEGLVKLADFGVATKLTEADVNTHSVVGTPYW 185
G+ +L E G++HR+IK NI+ + + KL DFG A +L E D S+ GT +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSLYGTEEY 181
Query: 186 MAPEVIEMS--------GVCAASDIWSVGCTVIELLTCVPPY 219
+ P++ E + A D+WS+G T T P+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 172
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VGT +M PE I +M
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 292 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G++G V++ D + G A+K+V LE E+L L+ IV G+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVAC-------AGLSSPRIVPLYGA 134
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++ ++I +E +E GSL +IK + G PE Y+ Q LEGL YLH + ++H D+
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 146 KGANILTTKEG-LVKLADFGVAT-----KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
K N+L + +G L DFG A L ++ + + GT MAPEV+ A
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ--DERPPIPESLSPDITDFLRQCFKK 257
DIWS C ++ +L P+ + P +I IP S +P +++ +K
Sbjct: 253 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRK 312
Query: 258 DARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRN 293
+ R A L RR + +L+ G +++
Sbjct: 313 EPVHRASAMEL---------RRKVGKALQEVGGLKS 339
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 22 LGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLKNLNHKNI 79
L + +G G +G V+ G NG +V+++++ Q + + + E +L+K L H+ +
Sbjct: 13 LVERLGAGQFGEVWMGY--YNGH----TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL 66
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIK-PNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
V+ L ++ T+ ++II EY+ENGSL + +K P+ L+ + AQ+ EG+ ++ E+
Sbjct: 67 VR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDM-AAQIAEGMAFIEER 124
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
IHR+++ ANIL + K+ADFG+A + + + P W APE I
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 198 AASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G + E++T PY + + + + R P++ ++ +R C+K
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 244
Query: 257 KDARQRPDAKTLLS 270
+ RP L S
Sbjct: 245 ERPEDRPTFDYLRS 258
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 26/276 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G++G V++ D + G A+K+V LE E+L L+ IV G+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVAC-------AGLSSPRIVPLYGA 132
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++ ++I +E +E GSL +IK + G PE Y+ Q LEGL YLH + ++H D+
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 146 KGANILTTKEG-LVKLADFGVAT-----KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
K N+L + +G L DFG A L ++ + + GT MAPEV+ A
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ--DERPPIPESLSPDITDFLRQCFKK 257
DIWS C ++ +L P+ + P +I IP S +P +++ +K
Sbjct: 251 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRK 310
Query: 258 DARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRN 293
+ R A L RR + +L+ G +++
Sbjct: 311 EPVHRASAMEL---------RRKVGKALQEVGGLKS 337
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 12/247 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ-EDLNIIMQEIDLLKNL-NHKNIVKYL 83
IG+G+Y +V + A+K V E + ED++ + E + + NH +V
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+T S L ++EYV G L ++ + PE Y A++ L YLHE+G+I+R
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYR 134
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIW 203
D+K N+L EG +KL D+G+ + T GTP ++APE++ + D W
Sbjct: 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWW 194
Query: 204 SVGCTVIELLTCVPPYY--------ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
++G + E++ P+ + LF+++ +++ IP SLS L+
Sbjct: 195 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFL 254
Query: 256 KKDARQR 262
KD ++R
Sbjct: 255 NKDPKER 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 129/259 (49%), Gaps = 15/259 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G G +G+V+K + G +A K + + +D + EI ++ L+H N+++ +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
++++ + +++EYV+ G L + I + E +++ Q+ EG+ ++H+ ++H D+
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYILHLDL 213
Query: 146 KGANILTTKEGL--VKLADFGVATKLT---EADVNTHSVVGTPYWMAPEVIEMSGVCAAS 200
K NIL +K+ DFG+A + + VN GTP ++APEV+ V +
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FGTPEFLAPEVVNYDFVSFPT 269
Query: 201 DIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
D+WSVG LL+ + P+ + + + + D + +S + +F+ + K
Sbjct: 270 DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK 329
Query: 258 DARQRPDAKTLLSHPWIQN 276
+ R A L HPW+ +
Sbjct: 330 EKSWRISASEALKHPWLSD 348
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 132/260 (50%), Gaps = 11/260 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL-NIIMQEIDLLKNLNHKN 78
Y + +G+G++G+V G VA+K ++ + +A+ D+ I +EI L+ L H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+K +K++ + +++EY N I++ +K E + Q++ + Y H
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS---EQEARRFFQQIISAVEYCHRH 131
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L + VK+ADFG++ +T+ + S G+P + APEVI SG
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVI--SGKLY 188
Query: 199 AS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
A D+WS G ++ ++ C ++ + +P LF+ + + +P+ LSP +++
Sbjct: 189 AGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 247
Query: 256 KKDARQRPDAKTLLSHPWIQ 275
+ R ++ W +
Sbjct: 248 IVNPLNRISIHEIMQDDWFK 267
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 25 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 78
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKP--NKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ G L + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKDP 256
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 257 EERPTFEYL 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 132/260 (50%), Gaps = 11/260 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHKN 78
Y + +G+G++G+V G VA+K ++ + +A+ D+ I +EI L+ L H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+K +K++ + +++EY N I++ +K E + Q++ + Y H
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS---EQEARRFFQQIISAVEYCHRH 132
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L + VK+ADFG++ +T+ + S G+P + APEVI SG
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVI--SGKLY 189
Query: 199 AS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
A D+WS G ++ ++ C ++ + +P LF+ + + +P+ LSP +++
Sbjct: 190 AGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 248
Query: 256 KKDARQRPDAKTLLSHPWIQ 275
+ R ++ W +
Sbjct: 249 IVNPLNRISIHEIMQDDWFK 268
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 35/267 (13%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
D + +G IG G++G VYKG +GD VA+K +++ + L E+ +L+ H
Sbjct: 7 DGQITVGQRIGSGSFGTVYKGK--WHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANI--IKPNKFGPFPESLVAVYIA-QVLEGLV 133
NI+ ++G T L I+ ++ E SL + I KF E + + IA Q +G+
Sbjct: 64 VNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKF----EMIKLIDIARQTAQGMD 118
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWMAPEV 190
YLH + +IHRD+K NI ++ VK+ DFG+AT + +H + G+ WMAPEV
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-GSHQFEQLSGSILWMAPEV 177
Query: 191 IEMSG---VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
I M SD+++ G + EL+T PY + + +V LSPD+
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR------GYLSPDL 231
Query: 248 TD-----------FLRQCFKKDARQRP 263
+ + +C KK +RP
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 18 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 71
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 129
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 249
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 250 EERPTFEYL 258
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 172
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VGT +M PE I +M
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 292 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 152/349 (43%), Gaps = 80/349 (22%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
+T KY LG +G G++G V + D+E+G A+K+V +D +E+D++K
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKV 56
Query: 74 LNHKNIVKYLGSLKT--------------------------------------RSHLHII 95
L+H NI+K + T +L++I
Sbjct: 57 LDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVI 116
Query: 96 LEYVEN---GSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILT 152
+EYV + L + I+ + P +L+++YI Q+ + ++H G+ HRDIK N+L
Sbjct: 117 MEYVPDTLHKVLKSFIRSGR--SIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 153 -TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCAASDIWSVGCTVI 210
+K+ +KL DFG A KL ++ + + + + ++ APE+ + + + D+WS+GC
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSV-AXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 211 ELLTCVPPYYELQPMPALFRIVQ----------------------------DERPPIPES 242
EL+ P + + L RI+Q D R +PE
Sbjct: 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG 293
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
D L Q + + R + ++HP+ + R + +S ++++
Sbjct: 294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNF 342
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 22 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 75
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ-LVDM-SAQIASGMAYVERMNYV 133
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 254 EERPTFEYL 262
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 119/248 (47%), Gaps = 9/248 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
+G G +G V+ G NG+ VAIK + ++ E ++E ++K L H +V+ L
Sbjct: 17 LGNGQFGEVWMGT--WNGNTKVAIKTLKPGTMSPESF---LEEAQIMKKLKHDKLVQ-LY 70
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++ + ++I+ EY+ GSL + +K + + AQV G+ Y+ IHRD
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
++ ANIL + K+ADFG+A + + + P W APE SD+W
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 204 SVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + EL+T PY + L ++ + R P P+ + + + C+KKD +R
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEER 250
Query: 263 PDAKTLLS 270
P + L S
Sbjct: 251 PTFEYLQS 258
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 31/293 (10%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIK-----QVSLENIAQEDLNI------IMQEIDLLKN 73
++G GAYG V + AIK Q + ++ NI I EI LLK+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSL-ANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L+H NI+K + + + +++ E+ E G L II +KF E A + Q+L G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF---DECDAANIMKQILSGI 159
Query: 133 VYLHEQGVIHRDIKGANI-LTTKEGL--VKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
YLH+ ++HRDIK NI L K L +K+ DFG+++ ++ D +GT Y++APE
Sbjct: 160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK-DYKLRDRLGTAYYIAPE 218
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD 249
V++ D+WS G + LL PP + Q + + V+ + + +I+D
Sbjct: 219 VLKKK-YNEKCDVWSCGVIMYILLCGYPP-FGGQNDQDIIKKVEKGKYYFDFNDWKNISD 276
Query: 250 FLRQCFK----KDARQRPDAKTLLSHPWIQ----NCRRALQSSLRHSGTMRNV 294
++ K D +R A+ L+ WI+ N ++ Q +L G + N+
Sbjct: 277 EAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTL--CGALSNM 327
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 64/320 (20%)
Query: 43 GDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENG 102
G++V +++++LE + E + + E+ + K NH NIV Y + + L ++ ++ G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 103 SLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLAD 162
S ++I + E +A + VL+ L Y+H G +HR +K ++IL + +G V L+
Sbjct: 112 SAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS- 170
Query: 163 FGVATKLTEA----------DVNTHSVVGTPYWMAPEVIE--MSGVCAASDIWSVGCTVI 210
G+ + L+ D +SV P W++PEV++ + G A SDI+SVG T
Sbjct: 171 -GLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITAC 228
Query: 211 ELLTCVPPYYELQPMPALFRIVQDERP--------------------------------- 237
EL P+ ++ L + P
Sbjct: 229 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTS 288
Query: 238 ------------PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR----AL 281
P + SP F+ QC +++ RP A TLL+H + + +R AL
Sbjct: 289 TPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 348
Query: 282 QSSLRHSGTMRNVEENGSAD 301
LR + N E + S D
Sbjct: 349 PELLRPVTPITNFEGSQSQD 368
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 22 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 75
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + ++I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQ-LVDM-SAQIASGMAYVERMNYV 133
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 253
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 254 EERPTFEYL 262
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 132/260 (50%), Gaps = 11/260 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHKN 78
Y + +G+G++G+V G VA+K ++ + +A+ D+ I +EI L+ L H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+K +K++ + +++EY N I++ +K E + Q++ + Y H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS---EQEARRFFQQIISAVEYCHRH 126
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L + VK+ADFG++ +T+ + S G+P + APEVI SG
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVI--SGKLY 183
Query: 199 AS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
A D+WS G ++ ++ C ++ + +P LF+ + + +P+ LSP +++
Sbjct: 184 AGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 242
Query: 256 KKDARQRPDAKTLLSHPWIQ 275
+ R ++ W +
Sbjct: 243 IVNPLNRISIHEIMQDDWFK 262
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 64/320 (20%)
Query: 43 GDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENG 102
G++V +++++LE + E + + E+ + K NH NIV Y + + L ++ ++ G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 103 SLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLAD 162
S ++I + E +A + VL+ L Y+H G +HR +K ++IL + +G V L+
Sbjct: 96 SAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS- 154
Query: 163 FGVATKLTEA----------DVNTHSVVGTPYWMAPEVIE--MSGVCAASDIWSVGCTVI 210
G+ + L+ D +SV P W++PEV++ + G A SDI+SVG T
Sbjct: 155 -GLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITAC 212
Query: 211 ELLTCVPPYYELQPMPALFRIVQDERP--------------------------------- 237
EL P+ ++ L + P
Sbjct: 213 ELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTS 272
Query: 238 ------------PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRR----AL 281
P + SP F+ QC +++ RP A TLL+H + + +R AL
Sbjct: 273 TPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 332
Query: 282 QSSLRHSGTMRNVEENGSAD 301
LR + N E + S D
Sbjct: 333 PELLRPVTPITNFEGSQSQD 352
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 132/260 (50%), Gaps = 11/260 (4%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLN-IIMQEIDLLKNLNHKN 78
Y + +G+G++G+V G VA+K ++ + +A+ D+ I +EI L+ L H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+K +K++ + +++EY N I++ +K E + Q++ + Y H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMS---EQEARRFFQQIISAVEYCHRH 122
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L + VK+ADFG++ +T+ + S G+P + APEVI SG
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVI--SGKLY 179
Query: 199 AS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
A D+WS G ++ ++ C ++ + +P LF+ + + +P+ LSP +++
Sbjct: 180 AGPEVDVWSCG-VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRML 238
Query: 256 KKDARQRPDAKTLLSHPWIQ 275
+ R ++ W +
Sbjct: 239 IVNPLNRISIHEIMQDDWFK 258
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA+K + + L + +E+ ++K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G+P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 252 PSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA+K + + L + +E+ ++K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G+P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 252 PSKRGTLEQIMKDRWM 267
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 32/272 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y G+ VA+K + E+ + + +EI++L+NL H+NIV
Sbjct: 28 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIV 86
Query: 81 KYLG--SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + + +I+E++ +GSL + NK Y Q+ +G+ YL +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR 145
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
+HRD+ N+L E VK+ DFG+ TK E D +V +P +W APE + S
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGL-TKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-----------------QDERP 237
ASD+WS G T+ ELLT + PM +++ + +R
Sbjct: 205 KFYIASDVWSFGVTLHELLTYCDS--DSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
P P + ++ +R+C++ R + L+
Sbjct: 263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 233
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 291
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 292 --------KFPQIK---AHPWTKVFR 306
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 237
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 238 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 295
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 296 --------KFPQIK---AHPWTKVFR 310
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 278
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 279 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 336
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 337 --------KFPQIK---AHPWTKVFR 351
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 70 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 125
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VGT +M PE I +M
Sbjct: 126 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 244
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 245 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L Y+ +G GAYG V +D +G+ VAIK++S ++ +E+ LLK++
Sbjct: 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 99
Query: 76 HKNIVKYL------GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
H+N++ L SL+ ++++ +++ L I+ F E + + Q+L
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGME----FSEEKIQYLVYQML 154
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
+GL Y+H GV+HRD+K N+ ++ +K+ DFG+A AD V T ++ APE
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPE 211
Query: 190 VI-EMSGVCAASDIWSVGCTVIELLT 214
VI DIWSVGC + E+LT
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 12/268 (4%)
Query: 13 SKTLDNKYMLGDE-IGKGAYGRVYKGLDLENG---DFVAIKQVSLENIAQEDLNIIMQEI 68
+K +D Y+ +E IG G +G V +G G VAIK + + + E
Sbjct: 8 AKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRREFLSEA 66
Query: 69 DLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
++ H NI++ G + + I+ E++ENG+L + ++ N G F + + +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGI 125
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTE--ADVNTHSVVGTPY-- 184
G+ YL E +HRD+ NIL + K++DFG++ L E +D S +G
Sbjct: 126 ASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPI 185
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
W APE I +ASD WS G + E+++ PY+++ + I QD R P P
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD 245
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + C++KD RP ++S
Sbjct: 246 CPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 15/206 (7%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L Y+ +G GAYG V +D +G+ VAIK++S ++ +E+ LLK++
Sbjct: 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81
Query: 76 HKNIVKYL------GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
H+N++ L SL+ ++++ +++ L I+ F E + + Q+L
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLK----FSEEKIQYLVYQML 136
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPE 189
+GL Y+H GV+HRD+K N+ ++ +K+ DFG+A AD V T ++ APE
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPE 193
Query: 190 VI-EMSGVCAASDIWSVGCTVIELLT 214
VI DIWSVGC + E+LT
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 233
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 291
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 292 --------KFPQIK---AHPWTKVFR 306
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 32/272 (11%)
Query: 25 EIGKGAYGRV----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
++G+G +G+V Y G+ VA+K + E+ + + +EI++L+NL H+NIV
Sbjct: 16 DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIV 74
Query: 81 KYLG--SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
KY G + + + +I+E++ +GSL + NK Y Q+ +G+ YL +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR 133
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV---GTP-YWMAPEVIEMS 194
+HRD+ N+L E VK+ DFG+ TK E D +V +P +W APE + S
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGL-TKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-----------------QDERP 237
ASD+WS G T+ ELLT + PM +++ + +R
Sbjct: 193 KFYIASDVWSFGVTLHELLTYCDS--DSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 250
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
P P + ++ +R+C++ R + L+
Sbjct: 251 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 227
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 228 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 285
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 286 --------KFPQIK---AHPWTKVFR 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 29/239 (12%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN-HK 77
KY L ++GKGAYG V+K +D G+ VA+K++ D +EI +L L+ H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 78 NIVKYLGSLKTRSH--LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYL 135
NIV L L+ + ++++ +Y+E L +I+ N P + V + Q+++ + YL
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYV---VYQLIKVIKYL 125
Query: 136 HEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV---------------- 179
H G++HRD+K +NIL E VK+ADFG++ T+++
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 180 -----VGTPYWMAPEVIEMS-GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV 232
V T ++ APE++ S D+WS+GC + E+L P + M L RI+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 235
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 236 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 293
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 294 --------KFPQIK---AHPWTKVFR 308
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 150/302 (49%), Gaps = 22/302 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-IMQEIDLLKNLNHKN 78
Y++ + +G+G++G+V + VA+K +S + + + D+++ + +EI LK L H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+K + T + + +++EY G L + I K E + Q++ + Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH 127
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCA 198
++HRD+K N+L VK+ADFG++ +T+ + S G+P + APEVI +G
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS-CGSPNYAAPEVI--NGKLY 184
Query: 199 AS---DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCF 255
A D+WS G + +L P+ + + +P LF+ V +P+ LSP +R+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMI 243
Query: 256 KKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNVEE-NGS-ADAEIPSEDNQSAG 313
D QR + + PW ++ +R +EE GS AD+ I S+ ++ G
Sbjct: 244 VADPMQRITIQEIRRDPWF---------NVNLPDYLRPMEEVQGSYADSRIVSKLGEAMG 294
Query: 314 ES 315
S
Sbjct: 295 FS 296
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G L + FVAIK + ++ + E ++ +H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + + II E++ENGSL + ++ N G F + + + G+ YL + +H
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVH 132
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTE--ADVNTHSVVGTPY---WMAPEVIEMSGVC 197
R + NIL + K++DFG++ L + +D S +G W APE I+
Sbjct: 133 RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 192
Query: 198 AASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
+ASD+WS G + E+++ PY+++ + I QD R P P + + C++
Sbjct: 193 SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQ 252
Query: 257 KDARQRP 263
KD RP
Sbjct: 253 KDRNHRP 259
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS--LENIAQEDLNI-IMQEIDLLKNLNHKNIVKY 82
+G GA+G VYKG+ + G+ V I L N+ M E ++ +++H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG + + + ++ + + +G L + +K L+ + Q+ +G++YL E+ ++H
Sbjct: 83 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERRLVH 140
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ N+L VK+ DFG+A +L E D ++ G WMA E I
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQP---MPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G T+ EL+T Y+ P +P L + ER P P + D+ + +C+
Sbjct: 200 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE--KGERLPQPPICTIDVYMVMVKCWM 257
Query: 257 KDARQRPDAKTL 268
DA RP K L
Sbjct: 258 IDADSRPKFKEL 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA+K + + L + +E+ ++K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 252 PSKRGTLEQIMKDRWM 267
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 13/249 (5%)
Query: 25 EIGKGAYGRVYKGLDLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
++G+G +G V+ G NG VAIK + ++ E +QE ++K L H+ +V+ L
Sbjct: 15 KLGQGCFGEVWMGT--WNGTTRVAIKTLKPGTMSPEAF---LQEAQVMKKLRHEKLVQ-L 68
Query: 84 GSLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
++ + + I+ EY+ GSL + +K K+ P+ LV + AQ+ G+ Y+ +
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQ-LVDM-AAQIASGMAYVERMNYV 126
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAAS 200
HRD++ ANIL + + K+ADFG+A + + + P W APE S
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 201 DIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + EL T PY + L ++ + R P P + D + QC++K+
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEP 246
Query: 260 RQRPDAKTL 268
+RP + L
Sbjct: 247 EERPTFEYL 255
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 24/287 (8%)
Query: 26 IGKGAYGRVY----KGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKNIV 80
+GKG++G+V KG D + A+K + + + Q+D + M E +L +
Sbjct: 349 LGKGSFGKVMLSERKGTD----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 81 KYLGS-LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
L S +T L+ ++EYV G L I+ + G F E Y A++ GL +L +G
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQSKG 462
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
+I+RD+K N++ EG +K+ADFG+ + V T GTP ++APE+I +
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D W+ G + E+L P +E + LF+ + + P+S+S + + K
Sbjct: 523 VDWWAFGVLLYEMLAGQAP-FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 581
Query: 260 RQR----PDA-KTLLSHP------WIQNCRRALQSSLRHSGTMRNVE 295
+R P+ + + H W + R+ +Q + + RN E
Sbjct: 582 GKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGRNAE 628
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (248), Expect = 7e-21, Method: Composition-based stats.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 17/247 (6%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 95
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+I+ EY+ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEV-TAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDI 202
D+ N L + +VK+ADFG++ +T H+ P W APE + + SD+
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 203 WSVGCTVIELLTCVPPYYELQPMPAL-FRIVQD-----ERPPIPESLSPDITDFLRQCFK 256
W+ G + E+ T Y + P P + V D R PE P + + +R C+K
Sbjct: 215 WAFGVLLWEIAT-----YGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWK 269
Query: 257 KDARQRP 263
RP
Sbjct: 270 WSPADRP 276
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 172
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VG +M PE I +M
Sbjct: 173 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 291
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 292 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 211
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 269
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 270 --------KFPQIK---AHPWTKVFR 284
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS--LENIAQEDLNI-IMQEIDLLKNLNHKNIVKY 82
+G GA+G VYKG+ + G+ V I L N+ M E ++ +++H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG + + + ++ + + +G L + +K L+ + Q+ +G++YL E+ ++H
Sbjct: 106 LGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAKGMMYLEERRLVH 163
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ N+L VK+ DFG+A +L E D ++ G WMA E I
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLA-RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 200 SDIWSVGCTVIELLTCVPPYYELQP---MPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
SD+WS G T+ EL+T Y+ P +P L + ER P P + D+ + +C+
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE--KGERLPQPPICTIDVYMVMVKCWM 280
Query: 257 KDARQRPDAKTL 268
DA RP K L
Sbjct: 281 IDADSRPKFKEL 292
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 204
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 205 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 262
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 263 --------KFPQIK---AHPWTKVFR 277
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 21/222 (9%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQEIDLLKN 73
T ++ ++L D +G+GA V++G + GD AIK NI+ +++ M+E ++LK
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK--VFNNISFLRPVDVQMREFEVLKK 63
Query: 74 LNHKNIVKYLG--SLKTRSHLHIILEYVENGSLANIIK--PNKFGPFPESLVAVYIAQVL 129
LNHKNIVK T H +I+E+ GSL +++ N +G PES + + V+
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVV 122
Query: 130 EGLVYLHEQGVIHRDIKGANILTT----KEGLVKLADFGVATKLTEADVNTHSVVGTPYW 185
G+ +L E G++HR+IK NI+ + + KL DFG A +L E D + GT +
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXLYGTEEY 181
Query: 186 MAPEVIEMS--------GVCAASDIWSVGCTVIELLTCVPPY 219
+ P++ E + A D+WS+G T T P+
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 31/292 (10%)
Query: 6 TTSAFHKSKTLDNK-YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII 64
T + + +S ++ + Y + +IG G +V++ L+ E AIK V+LE + L+
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY 73
Query: 65 MQEIDLLKNLNHKN--IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLV 121
EI L L + I++ T ++++++E N L + +K K P+
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK-- 130
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSV 179
Y +LE + +H+ G++H D+K AN L +G++KL DFG+A ++ V S
Sbjct: 131 -SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 180 VGTPYWMAPEVI-EMSG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPAL 228
VGT +M PE I +MS + SD+WS+GC + + P+ ++ +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 229 FRIVQD-----ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ D E P IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 249 LHAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA++ + + L + +E+ ++K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G+P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 252 PSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VAIK + + L + +E+ ++K LNH NI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++I+EY G + + + + G E Q++ + Y H++
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + G+P + APE+ +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 191 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 249
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ WI
Sbjct: 250 PIKRGTLEQIMKDRWI 265
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 11/228 (4%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
S T ++Y ++G+G YG VYK +D + VAIK++ LE+ + ++E+ LLK
Sbjct: 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLK 88
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L H+NI++ + LH+I EY EN L + N ++ ++ Q++ G+
Sbjct: 89 ELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGV 145
Query: 133 VYLHEQGVIHRDIKGANIL-----TTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWM 186
+ H + +HRD+K N+L ++ ++K+ DFG+A TH ++ T ++
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYR 204
Query: 187 APEVIEMSGVCAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ 233
PE++ S + S DIWS+ C E+L P + + LF+I +
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE 252
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 11 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 66
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 125
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + + + S VG+ + W PEV+ S + SD
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 243
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 244 ERPTFKILLSN 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 15 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 70
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 129
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + + + S VG+ + W PEV+ S + SD
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 247
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 248 ERPTFKILLSN 258
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 86
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 145
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + + + S VG+ + W PEV+ S + SD
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 263
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 264 ERPTFKILLSN 274
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 22 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 77
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 136
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + + + S VG+ + W PEV+ S + SD
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 254
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 255 ERPTFKILLSN 265
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA+K + + L + +E+ ++K LNH NI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G+P + APE+ +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDTFCGSPPYAAPELFQGKKYDGP 185
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 186 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 244
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 245 PSKRGTLEQIMKDRWM 260
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 211
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 269
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 270 --------KFPQIK---AHPWTKVFR 284
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + + + S VG+ + W PEV+ S + SD
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 248
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 249 ERPTFKILLSN 259
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 73 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 128
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VGT +M PE I +M
Sbjct: 129 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 247
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 248 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAI------KQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
+G+G +G VY+G+ + G+ + + K +L+N + M E ++KNL+H +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLDHPH 70
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IVK +G ++ II+E G L + ++ NK +LV +Y Q+ + + YL
Sbjct: 71 IVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAMAYLESI 128
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
+HRDI NIL VKL DFG++ + + D SV P WM+PE I
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 198 AASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
ASD+W + E+L+ P++ L+ + + + +R P P+ P + + +C+
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWD 248
Query: 257 KDARQRP 263
D RP
Sbjct: 249 YDPSDRP 255
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats.
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 26 IGKGAYGRVYKGLDLEN-GDFVAI------KQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
+G+G +G VY+G+ + G+ + + K +L+N + M E ++KNL+H +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-----FMSEAVIMKNLDHPH 74
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
IVK +G ++ II+E G L + ++ NK +LV +Y Q+ + + YL
Sbjct: 75 IVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAMAYLESI 132
Query: 139 GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVC 197
+HRDI NIL VKL DFG++ + + D SV P WM+PE I
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 198 AASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFK 256
ASD+W + E+L+ P++ L+ + + + +R P P+ P + + +C+
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWD 252
Query: 257 KDARQRP 263
D RP
Sbjct: 253 YDPSDRP 259
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 212
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 213 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 270
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 271 --------KFPQIK---AHPWTKVFR 285
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 31/292 (10%)
Query: 6 TTSAFHKSKTLDNK-YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII 64
T + + +S ++ + Y + +IG G +V++ L+ E AIK V+LE + L+
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY 73
Query: 65 MQEIDLLKNLNHKN--IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLV 121
EI L L + I++ T ++++++E N L + +K K P+
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK-- 130
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSV 179
Y +LE + +H+ G++H D+K AN L +G++KL DFG+A ++ V S
Sbjct: 131 -SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 180 VGTPYWMAPEVI-EMSG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPAL 228
VGT +M PE I +MS + SD+WS+GC + + P+ ++ +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 229 FRIVQD-----ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
+ D E P IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 249 LHAIIDPNHEIEFPDIPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 11/251 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 86
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 145
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L +G+VK++DFG++ + D S VG+ + W PEV+ S + SD
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVL--DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
IW+ G + E+ + PY I Q R P S + + C+ + A
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKAD 263
Query: 261 QRPDAKTLLSH 271
+RP K LLS+
Sbjct: 264 ERPTFKILLSN 274
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 131/311 (42%), Gaps = 52/311 (16%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQ---EDLNIIMQEIDLLK 72
L KY L IG+G+YG V ++ + AIK ++ I Q +D+ I E+ L+K
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSL---------------ANIIKPNKFGPFP 117
L+H NI + + ++ +++E G L A + + P P
Sbjct: 84 KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 118 ES-----------------------LVAVYIAQVLEGLVYLHEQGVIHRDIKGANIL--T 152
E L++ + Q+ L YLH QG+ HRDIK N L T
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 153 TKEGLVKLADFGVATKLTEADVNTH----SVVGTPYWMAPEVIEMSGVCAA--SDIWSVG 206
K +KL DFG++ + + + + + GTPY++APEV+ + D WS G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 207 CTVIELLTCVPPYYELQPMPALFRIVQDE---RPPIPESLSPDITDFLRQCFKKDARQRP 263
+ LL P+ + + +++ + P LSP D L ++ +R
Sbjct: 264 VLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF 323
Query: 264 DAKTLLSHPWI 274
DA L HPWI
Sbjct: 324 DAMRALQHPWI 334
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 218
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 219 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 276
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 277 --------KFPQIK---AHPWTKVFR 291
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 25/280 (8%)
Query: 21 MLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+L E+G+GA+G+V Y ++ VA+K +L++ + +E +LL NL
Sbjct: 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVK--TLKDASDNARKDFHREAELLTNLQ 73
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---PNKF----GPFPESLV---AVYI 125
H++IVK+ G L ++ EY+++G L ++ P+ G P L ++I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 126 AQ-VLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD---VNTHSVVG 181
AQ + G+VYL Q +HRD+ N L + LVK+ DFG++ + D V H+++
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 182 TPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIP 240
WM PE I SD+WS+G + E+ T P+Y+L + I Q P
Sbjct: 194 IR-WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP 252
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRA 280
+ ++ + + C++++ R + K + H +QN +A
Sbjct: 253 RTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAKA 290
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA++ + + L + +E+ ++K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++++EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + G+P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN-KLDEFCGSPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ W+
Sbjct: 252 PSKRGTLEQIMKDRWM 267
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN- 78
Y + +IG G +V++ L+ E AIK V+LE + L+ EI L L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 79 -IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-FGPFPESLVAVYIAQVLEGLVYLH 136
I++ T ++++++E N L + +K K P+ Y +LE + +H
Sbjct: 69 KIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK---SYWKNMLEAVHTIH 124
Query: 137 EQGVIHRDIKGANILTTKEGLVKLADFGVATKLT--EADVNTHSVVGTPYWMAPEVI-EM 193
+ G++H D+K AN L +G++KL DFG+A ++ V S VGT +M PE I +M
Sbjct: 125 QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 194 SG----------VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-----ERPP 238
S + SD+WS+GC + + P+ ++ + + D E P
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 243
Query: 239 IPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
IPE D+ D L+ C K+D +QR LL+HP++Q
Sbjct: 244 IPEK---DLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 207
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 208 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 265
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 266 --------KFPQIK---AHPWTKVFR 280
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 125/249 (50%), Gaps = 21/249 (8%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 78
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 137
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAAS 200
D+ N L + LVK+ADFG+ ++L D T + G + W APE + + S
Sbjct: 138 DLAARNCLVGENHLVKVADFGL-SRLMTGDTYT-APAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQC 254
D+W+ G + E+ T Y + P P + + +++ D R PE + + +R C
Sbjct: 196 DVWAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 250
Query: 255 FKKDARQRP 263
++ + RP
Sbjct: 251 WQWNPSDRP 259
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G+G +G VY+G+ + VA+K ++ ++ M E ++KNL+H +IVK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+G ++ II+E G L + ++ NK +LV +Y Q+ + + YL +H
Sbjct: 91 IGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLV-LYSLQICKAMAYLESINCVH 148
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASD 201
RDI NIL VKL DFG++ + + D SV P WM+PE I ASD
Sbjct: 149 RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 208
Query: 202 IWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
+W + E+L+ P++ L+ + + + +R P P+ P + + +C+ D
Sbjct: 209 VWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPS 268
Query: 261 QRPDAKTLLS 270
RP L+
Sbjct: 269 DRPRFTELVC 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 125/249 (50%), Gaps = 21/249 (8%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
++G G YG VY+G+ + VA+K + + + E+ ++E ++K + H N+V+ LG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF---LKEAAVMKEIKHPNLVQLLG 77
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLEGLVYLHEQGVIHR 143
+II E++ G+L + ++ ++V +Y+A Q+ + YL ++ IHR
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAAS 200
D+ N L + LVK+ADFG+ ++L D T + G + W APE + + S
Sbjct: 137 DLAARNCLVGENHLVKVADFGL-SRLMTGDTYT-APAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPAL-----FRIVQ-DERPPIPESLSPDITDFLRQC 254
D+W+ G + E+ T Y + P P + + +++ D R PE + + +R C
Sbjct: 195 DVWAFGVLLWEIAT-----YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 249
Query: 255 FKKDARQRP 263
++ + RP
Sbjct: 250 WQWNPSDRP 258
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 21 MLGDEIGKGAYGRVYKG-----LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+L E+G+GA+G+V+ L ++ VA+K +L+ ++ +E +LL L
Sbjct: 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQDFQREAELLTMLQ 101
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-------------KFGPFPESLVA 122
H++IV++ G L ++ EY+ +G L ++ + GP +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT 182
+QV G+VYL +HRD+ N L + +VK+ DFG++ + D + V G
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY--YRVGGR 219
Query: 183 PY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERP 237
WM PE I SD+WS G + E+ T P+Y+L A+ I Q
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 279
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAK 266
P + P++ +R C++++ +QR K
Sbjct: 280 ERPRACPPEVYAIMRGCWQREPQQRHSIK 308
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VAIK + + L + +E+ ++K LNH NI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L++I+EY G + + + + G E Q++ + Y H++
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + G P + APE+ +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP +S D + L++ +
Sbjct: 194 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLN 252
Query: 259 ARQRPDAKTLLSHPWI 274
+R + ++ WI
Sbjct: 253 PIKRGTLEQIMKDRWI 268
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 44/288 (15%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V +D G VAIK++ ++ +E+ LLK++ H+N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+L + ++++ ++ L ++K K G E + + Q+L+GL Y+H G
Sbjct: 93 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLG---EDRIQFLVYQMLKGLRYIHAAG 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSGVCA 198
+IHRD+K N+ ++ +K+ DFG+A +AD V T ++ APEVI
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 199 ASDIWSVGCTVIELL---------------------TCVPPYYELQP---------MPAL 228
DIWSVGC + E++ T PP +Q M L
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265
Query: 229 FRIVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ + + I + SP + L + DA QR A L+HP+ ++
Sbjct: 266 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 21 MLGDEIGKGAYGRVYKG-----LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+L E+G+GA+G+V+ L ++ VA+K +L+ ++ +E +LL L
Sbjct: 21 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQDFQREAELLTMLQ 78
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-------------KFGPFPESLVA 122
H++IV++ G L ++ EY+ +G L ++ + GP +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT 182
+QV G+VYL +HRD+ N L + +VK+ DFG++ + D + V G
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY--YRVGGR 196
Query: 183 PY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERP 237
WM PE I SD+WS G + E+ T P+Y+L A+ I Q
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 256
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAK 266
P + P++ +R C++++ +QR K
Sbjct: 257 ERPRACPPEVYAIMRGCWQREPQQRHSIK 285
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 84 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 141
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ +R+C+ D
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 261
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 262 ADSRPKFRELI 272
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 21 MLGDEIGKGAYGRVYKG-----LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+L E+G+GA+G+V+ L ++ VA+K +L+ ++ +E +LL L
Sbjct: 15 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK--ALKEASESARQDFQREAELLTMLQ 72
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-------------KFGPFPESLVA 122
H++IV++ G L ++ EY+ +G L ++ + GP +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT 182
+QV G+VYL +HRD+ N L + +VK+ DFG++ + D + V G
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY--YRVGGR 190
Query: 183 PY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERP 237
WM PE I SD+WS G + E+ T P+Y+L A+ I Q
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL 250
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAK 266
P + P++ +R C++++ +QR K
Sbjct: 251 ERPRACPPEVYAIMRGCWQREPQQRHSIK 279
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 203
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 204 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 261
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 262 --------KFPQIK---AHPWTKVFR 276
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 200
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 201 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 258
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 259 --------KFPQIK---AHPWTKVFR 273
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 258 --------KFPQIK---AHPWTKVFR 272
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 24/287 (8%)
Query: 26 IGKGAYGRVY----KGLDLENGDFVAIKQVSLENIAQED-LNIIMQEIDLLKNLNHKNIV 80
+GKG++G+V KG D + A+K + + + Q+D + M E +L +
Sbjct: 28 LGKGSFGKVMLSERKGTD----ELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 83
Query: 81 KYLGS-LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
L S +T L+ ++EYV G L I+ + G F E Y A++ GL +L +G
Sbjct: 84 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGRFKEPHAVFYAAEIAIGLFFLQSKG 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
+I+RD+K N++ EG +K+ADFG+ + V T GTP ++APE+I +
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D W+ G + E+L P +E + LF+ + + P+S+S + + K
Sbjct: 202 VDWWAFGVLLYEMLAGQAP-FEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHP 260
Query: 260 RQR----PDA-KTLLSHP------WIQNCRRALQSSLRHSGTMRNVE 295
+R P+ + + H W + R+ +Q + RN E
Sbjct: 261 GKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAE 307
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 258 --------KFPQIK---AHPWTKVFR 272
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 258 --------KFPQIK---AHPWTKVFR 272
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEIXINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 85 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 142
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ +R+C+ D
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 262
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 263 ADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 92 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 149
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 150 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 209
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ +R+C+ D
Sbjct: 210 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 269
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 270 ADSRPKFRELI 280
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEIXINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 7/249 (2%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VAIK + ++++++ ++E ++ NL+H+ +V+ G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYG 71
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + II EY+ NG L N ++ + + L+ + V E + YL + +HRD
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLHRD 130
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
+ N L +G+VK++DFG++ + + + + P W PEV+ S + SDIW
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 204 SVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
+ G + E+ + PY I Q R P S + + C+ + A +R
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 250
Query: 263 PDAKTLLSH 271
P K LLS+
Sbjct: 251 PTFKILLSN 259
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 71
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 129
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 190 WSCGIVLTAMLAGELPW 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEIXINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 135/266 (50%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V L+ A ++ +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 258 --------KFPQIK---AHPWTKVFR 272
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V +D +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
+ P K +HPW + R
Sbjct: 258 --------KFPQIK---AHPWTKVFR 272
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + F + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG+A L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 8 SAFHKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIA-QEDL 61
S H +L E+G+GA+G+V Y ++ VA+K + +A ++D
Sbjct: 5 SGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDF 64
Query: 62 NIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLV 121
+E +LL NL H++IVK+ G L ++ EY+++G L ++ + GP LV
Sbjct: 65 Q---REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAH--GPDAMILV 119
Query: 122 ---------------AVYIA-QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGV 165
++IA Q+ G+VYL Q +HRD+ N L LVK+ DFG+
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 166 ATKLTEAD---VNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYE 221
+ + D V H+++ WM PE I SD+WS G + E+ T P+++
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
Query: 222 LQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTL 268
L + I Q P ++ D + C++++ +QR + K +
Sbjct: 239 LSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+KY +IG+G +G V+K + G VA+K+V +EN + ++EI +L+ L H+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 78 NIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
N+V + +T++ ++++ ++ E+ LA ++ N F S + + +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLS-NVLVKFTLSEIKRVMQMLL 135
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN----THSVVGTPYW 185
GL Y+H ++HRD+K AN+L T++G++KLADFG+A + A + + V T ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 186 MAPE-VIEMSGVCAASDIWSVGCTVIELLTCVP 217
PE ++ D+W GC + E+ T P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ +R+C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 131/276 (47%), Gaps = 10/276 (3%)
Query: 3 RQTTTSAFHKSKTLDNKYMLGDEI-GKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQ 58
R +T + +K LD + D++ G G +G V G L + VAIK + + +
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 59 EDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPE 118
+ + + E ++ +H NI++ G + + I+ EY+ENGSL + ++ +
Sbjct: 77 QRRDF-LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI 135
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
LV + + + G+ YL + G +HRD+ NIL + K++DFG++ L + ++
Sbjct: 136 QLVGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 179 VVGTPY---WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQD 234
G W +PE I +ASD+WS G + E+++ PY+E+ + + +
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
R P P + + C++KD RP + ++S
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 290
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 84 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 141
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ +R+C+ D
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCWMID 261
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 262 ADSRPKFRELI 272
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 34/266 (12%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V L+ A ++ +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SXICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES---LSPDITDFLR 252
++ D+WS GC + ELL P + + L I++ P E ++P+ T+F
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF-- 257
Query: 253 QCFKKDARQRPDAKTLLSHPWIQNCR 278
P K +HPW + R
Sbjct: 258 --------AFPQIK---AHPWTKVFR 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 97.1 bits (240), Expect = 6e-20, Method: Composition-based stats.
Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 11/250 (4%)
Query: 25 EIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
E+G G +G V G D VA+K + ++++++ QE + L+H +VK+ G
Sbjct: 15 ELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEF---FQEAQTMMKLSHPKLVKFYG 70
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
++I+ EY+ NG L N ++ + G P L+ + V EG+ +L IHRD
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM-CYDVCEGMAFLESHQFIHRD 129
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAASD 201
+ N L ++ VK++DFG+ + D S VGT + W APEV + SD
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 202 IWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDAR 260
+W+ G + E+ + PY + ++ Q R P S I + C+ +
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPE 247
Query: 261 QRPDAKTLLS 270
+RP + LLS
Sbjct: 248 KRPTFQQLLS 257
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 110/198 (55%), Gaps = 18/198 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK--YL 83
IG G++G VY+ ++G+ VAIK+V L+ A ++ +E+ +++ L+H NIV+ Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKN-----RELQIMRKLDHCNIVRLRYF 81
Query: 84 ----GSLKTRSHLHIILEYVENGSLANIIKPNKFGP--FPESLVAVYIAQVLEGLVYLHE 137
G K +L+++L+YV ++ + + P V +Y+ Q+ L Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 138 QGVIHRDIKGANILTTKE-GLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSG 195
G+ HRDIK N+L + ++KL DFG A +L + N S + + Y+ APE+I +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-SYICSRYYRAPELIFGATD 199
Query: 196 VCAASDIWSVGCTVIELL 213
++ D+WS GC + ELL
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 143/299 (47%), Gaps = 45/299 (15%)
Query: 16 LDNKYMLGDEI-GKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
++ Y L E+ G+GAY +V + L+NG A+K + E A + + +E++ L
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKII--EKQAGHSRSRVFREVETLYQC 67
Query: 75 -NHKNIVKYLGSLKTRSHLHIILEYVENGS-LANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+KNI++ + + + +++ E ++ GS LA+I K F S V +A L+
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALD-- 125
Query: 133 VYLHEQGVIHRDIKGANILTT---KEGLVKLADFGV---------ATKLTEADVNTHSVV 180
+LH +G+ HRD+K NIL K VK+ DF + T +T ++ T
Sbjct: 126 -FLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP--C 182
Query: 181 GTPYWMAPEVIEMSGVCAA-----SDIWSVGCTVIELLTCVPPYY------------ELQ 223
G+ +MAPEV+E+ A D+WS+G + +L+ PP+ E+
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 224 PMP--ALFRIVQDERPPIPES----LSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ LF +Q+ + P+ +S + D + + +DA+QR A +L HPW+Q
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + F + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 21 MLGDEIGKGAYGRVYKGLDLE-----NGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+LG +G+G +G+V K VA+K + EN + +L ++ E ++LK +N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVN 84
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-KFGP---------------FPES 119
H +++K G+ L +I+EY + GSL ++ + K GP P+
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 120 LVAV------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
+ Q+ +G+ YL E ++HRD+ NIL + +K++DFG++ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
G P WMA E + SD+WS G + E++T Y P LF +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 232 VQ-DERPPIPESLSPDITDFLRQCFKKDARQRP 263
++ R P++ S ++ + QC+K++ +RP
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 84 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 141
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 262 ADSRPKFRELI 272
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 14/220 (6%)
Query: 9 AFHKSKTLDNKY------MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDL 61
+F++ K + N + + G+++G+G +G VYKG N VA+K+++ + +I E+L
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEEL 73
Query: 62 NIIM-QEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
QEI ++ H+N+V+ LG L ++ Y+ NGSL + + P
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 121 VAVYIAQ-VLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGV--ATKLTEADVNTH 177
+ IAQ G+ +LHE IHRDIK ANIL + K++DFG+ A++ V
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP 217
+VGT +MAPE + + SDI+S G ++E++T +P
Sbjct: 194 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + F + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 85 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 142
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 263 ADSRPKFRELI 273
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 86 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 143
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 203
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 204 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 263
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 264 ADSRPKFRELI 274
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 83 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 140
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 260
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 261 ADSRPKFRELI 271
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 25/274 (9%)
Query: 22 LGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
LG +G+GA+G+V + G+D VA+K + E + +M E+ +L ++ H
Sbjct: 32 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 90
Query: 77 K-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF--PESL---------V 121
N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L +
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVV 180
Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 181 GTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIVQDERP 237
P WMAPE I SD+WS G + E+ + Y + F R+ + R
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P+ +P++ + C+ + QRP L+ H
Sbjct: 271 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 14/220 (6%)
Query: 9 AFHKSKTLDNKY------MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDL 61
+F++ K + N + + G+++G+G +G VYKG N VA+K+++ + +I E+L
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEEL 73
Query: 62 NIIM-QEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
QEI ++ H+N+V+ LG L ++ Y+ NGSL + + P
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 121 VAVYIAQ-VLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGV--ATKLTEADVNTH 177
+ IAQ G+ +LHE IHRDIK ANIL + K++DFG+ A++ V
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP 217
+VGT +MAPE + + SDI+S G ++E++T +P
Sbjct: 194 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 33/290 (11%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL-----ENIAQEDLNIIMQEIDLLK 72
++Y L +IG G +G D + + VA+K + EN+ +E +N +
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIIN--------HR 70
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
+L H NIV++ + T +HL I++EY G L I G F E + Q++ G+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 133 VYLHEQGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
Y H V HRD+K N L + +K+ADFG +K + S VGTP ++APEV
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY-SKASVLHSQPKSAVGTPAYIAPEV 187
Query: 191 I---EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI----VQDERPPIPE-- 241
+ E G A D+WS G T+ +L P+ + + P FR + + + IP+
Sbjct: 188 LLKKEYDGKVA--DVWSCGVTLYVMLVGAYPFEDPEE-PKNFRKTIHRILNVQYAIPDYV 244
Query: 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+SP+ + + F D +R + +H W + L + L + TM
Sbjct: 245 HISPECRHLISRIFVADPAKRISIPEIRNHEWFL---KNLPADLMNDNTM 291
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ EG+ YL ++ ++
Sbjct: 79 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAEGMNYLEDRRLV 136
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 137 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 196
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 197 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 256
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 257 ADSRPKFRELI 267
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+KY +IG+G +G V+K + G VA+K+V +EN + ++EI +L+ L H+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 78 NIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
N+V + +T++ ++++ ++ E+ LA ++ N F S + + +L
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLS-NVLVKFTLSEIKRVMQMLL 134
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN----THSVVGTPYW 185
GL Y+H ++HRD+K AN+L T++G++KLADFG+A + A + + V T ++
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 186 MAPE-VIEMSGVCAASDIWSVGCTVIELLTCVP 217
PE ++ D+W GC + E+ T P
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 227
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 24/277 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILI 87
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF-PESL------- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 121 --VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVNTH 177
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 178 SVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIVQD 234
P WMAPE I SD+WS G + E+ + Y + F R+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 267
Query: 235 ERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
R P+ +P++ + C+ + QRP L+ H
Sbjct: 268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + LV + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + LV + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 83 LLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 140
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 141 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 200
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 201 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 260
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 261 ADSRPKFRELI 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + F + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG+ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 76
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 21 MLGDEIGKGAYGRVYKGLDLE-----NGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+LG +G+G +G+V K VA+K + EN + +L ++ E ++LK +N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVN 84
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-KFGP---------------FPES 119
H +++K G+ L +I+EY + GSL ++ + K GP P+
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 120 LVAV------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
+ Q+ +G+ YL E ++HRD+ NIL + +K++DFG++ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
G P WMA E + SD+WS G + E++T Y P LF +
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 232 VQ-DERPPIPESLSPDITDFLRQCFKKDARQRP 263
++ R P++ S ++ + QC+K++ +RP
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + LV + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 14/220 (6%)
Query: 9 AFHKSKTLDNKY------MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDL 61
+F++ K + N + + G+++G+G +G VYKG N VA+K+++ + +I E+L
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEEL 67
Query: 62 NIIM-QEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
QEI ++ H+N+V+ LG L ++ Y+ NGSL + + P
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 121 VAVYIAQ-VLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGV--ATKLTEADVNTH 177
+ IAQ G+ +LHE IHRDIK ANIL + K++DFG+ A++ V
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP 217
+VGT +MAPE + + SDI+S G ++E++T +P
Sbjct: 188 RIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 109
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL + ++ + LV + + + G+ YL + G +H
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVH 168
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 228
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 288
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 289 RNNRPKFEQIVS 300
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 87
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 267
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 268 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 85
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 31/273 (11%)
Query: 21 MLGDEIGKGAYGRVYKGLDLE-----NGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+LG +G+G +G+V K VA+K + EN + +L ++ E ++LK +N
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK-ENASPSELRDLLSEFNVLKQVN 84
Query: 76 HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPN-KFGP---------------FPES 119
H +++K G+ L +I+EY + GSL ++ + K GP P+
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 120 LVAV------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD 173
+ Q+ +G+ YL E ++HRD+ NIL + +K++DFG++ + E D
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 174 VNTHSVVG-TPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI 231
G P WMA E + SD+WS G + E++T Y P LF +
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 232 VQ-DERPPIPESLSPDITDFLRQCFKKDARQRP 263
++ R P++ S ++ + QC+K++ +RP
Sbjct: 265 LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+KY +IG+G +G V+K + G VA+K+V +EN + ++EI +L+ L H+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 78 NIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
N+V + +T++ ++++ ++ E+ LA ++ N F S + + +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLS-NVLVKFTLSEIKRVMQMLL 135
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN----THSVVGTPYW 185
GL Y+H ++HRD+K AN+L T++G++KLADFG+A + A + + V T ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 186 MAPE-VIEMSGVCAASDIWSVGCTVIELLTCVP 217
PE ++ D+W GC + E+ T P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 114/213 (53%), Gaps = 15/213 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+KY +IG+G +G V+K + G VA+K+V +EN + ++EI +L+ L H+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 78 NIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVL 129
N+V + +T++ ++++ ++ E+ LA ++ N F S + + +L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLS-NVLVKFTLSEIKRVMQMLL 135
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN----THSVVGTPYW 185
GL Y+H ++HRD+K AN+L T++G++KLADFG+A + A + + V T ++
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 186 MAPE-VIEMSGVCAASDIWSVGCTVIELLTCVP 217
PE ++ D+W GC + E+ T P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 5 TTTSAFHKSKTLDNKYMLGDEI-GKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQED 60
+T + +K LD + D++ G G +G V G L + VAIK + + ++
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 61 LNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
+ + E ++ +H NI++ G + + I+ EY+ENGSL + ++ + L
Sbjct: 62 RDF-LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL 120
Query: 121 VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV 180
V + + + G+ YL + G +HRD+ NIL + K++DFG++ L + ++
Sbjct: 121 VGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 181 GTPY---WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDER 236
G W +PE I +ASD+WS G + E+++ PY+E+ + + + R
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR 239
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
P P + + C++KD RP + ++S
Sbjct: 240 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL-ENIAQEDLNIIMQEIDLLKNLNH 76
++Y L +IG G +G D ++ + VA+K + E IA + +EI ++L H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN----VKREIINHRSLRH 74
Query: 77 KNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLH 136
NIV++ + T +HL I++EY G L I G F E + Q++ G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 137 EQGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI--- 191
V HRD+K N L + +K+ DFG +K + S VGTP ++APEV+
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 192 EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI----VQDERPPIPE--SLSP 245
E G A D+WS G T+ +L P+ + + P FR + + + IP+ +SP
Sbjct: 192 EYDGKVA--DVWSCGVTLYVMLVGAYPFEDPEE-PKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 246 DITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + + F D +R + +H W + L + L + TM
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFL---KNLPADLMNDNTM 291
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 85
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 85
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 266 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
++Y L +IG G +G D ++ + VA+K + E+ + +EI ++L H
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN---VKREIINHRSLRHP 74
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
NIV++ + T +HL I++EY G L I G F E + Q++ G+ Y H
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 138 QGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---E 192
V HRD+K N L + +K+ DFG +K + S VGTP ++APEV+ E
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI----VQDERPPIPE--SLSPD 246
G A D+WS G T+ +L P+ + + P FR + + + IP+ +SP+
Sbjct: 192 YDGKVA--DVWSCGVTLYVMLVGAYPFEDPEE-PKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + F D +R + +H W + L + L + TM
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWFL---KNLPADLMNDNTM 290
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 122
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I+E+ + G+L+ + K N+F P+ PE L
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 243 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 302
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 303 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 12/202 (5%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKN 78
+Y +G GAYG V D+++G +A+K++S + +E+ LLK++ H+N
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 79 IVKYLGSLKTRSHLH-----IILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLV 133
++ L + L ++ ++ L NI+K K + V I Q+L GL
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLK 168
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IE 192
Y+H +IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLN 225
Query: 193 MSGVCAASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLT 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 76
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I E+ + G+L+ + K N+F P+ PE L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLT-EADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 9/245 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G L + VAIK + + ++ + + E ++ +H NI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIHL 88
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ EY+ENGSL +K N G F + + + G+ YL + G +H
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKND-GQFTVIQLVGMLRGISAGMKYLSDMGYVH 147
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W APE I +A
Sbjct: 148 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA 207
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++K+
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKE 267
Query: 259 ARQRP 263
RP
Sbjct: 268 RNSRP 272
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 115/229 (50%), Gaps = 19/229 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D G VA+K++S
Sbjct: 1 MSKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ LLK +NHKNI+ L +L+ +++++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 HME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLT-CV 216
+ T VV T Y+ APEVI G A DIWSVGC + EL+ CV
Sbjct: 176 ACTNFMMTPYVV-TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV 223
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IGKG +G V G D G+ VA+K + + AQ + E ++ L H N+V+ LG
Sbjct: 20 IGKGEFGDVMLG-DY-RGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGV 73
Query: 86 L-KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + + L+I+ EY+ GSL + ++ + + V E + YL +HRD
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
+ N+L +++ + K++DFG LT+ +T P W APE + + SD+W
Sbjct: 134 LAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 204 SVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + E+ + PY + + R+ + + P+ P + + ++ C+ DA R
Sbjct: 190 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 249
Query: 263 P 263
P
Sbjct: 250 P 250
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 62 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 121
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 122 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 170
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 171 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 229
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 230 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 289
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 290 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 349
Query: 293 NVEE 296
+E
Sbjct: 350 EDKE 353
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 84 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 141
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 262 ADSRPKFRELI 272
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IGKG +G V G D G+ VA+K + + AQ + E ++ L H N+V+ LG
Sbjct: 201 IGKGEFGDVMLG-DY-RGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGV 254
Query: 86 L-KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + + L+I+ EY+ GSL + ++ + + V E + YL +HRD
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
+ N+L +++ + K++DFG LT+ +T P W APE + SD+W
Sbjct: 315 LAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 204 SVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + E+ + PY + + R+ + + P+ P + D ++ C+ DA R
Sbjct: 371 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR 430
Query: 263 P 263
P
Sbjct: 431 P 431
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 84 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 141
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 142 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 201
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 202 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 261
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 262 ADSRPKFRELI 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 89 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 146
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 267 ADSRPKFRELI 277
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 76
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I E+ + G+L+ + K N+F P+ PE L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GAYG V ++ + VA+K V ++ NI +EI + LNH+N+VK+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINAMLNHENVVKFYGH 73
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 131
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 192 WSCGIVLTAMLAGELPW 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 88 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 145
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 146 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 205
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 206 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 265
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 266 ADSRPKFRELI 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 85 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 142
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 263 ADSRPKFRELI 273
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 115
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 116 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 223
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 284 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 343
Query: 293 NVEE 296
+E
Sbjct: 344 EDKE 347
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 107 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 164
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 165 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 224
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 225 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 284
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 285 ADSRPKFRELI 295
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
++ LG +G+GA+G+V + G+D VA+K + E + +M E+ +L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 76
Query: 73 NLNHK-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPF---PESL----- 120
++ H N+V LG+ K L +I E+ + G+L+ + K N+F P+ PE L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 121 ----VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVN 175
+ Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIV 232
P WMAPE I SD+WS G + E+ + Y + F R+
Sbjct: 197 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 256
Query: 233 QDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
+ R P+ +P++ + C+ + QRP L+ H
Sbjct: 257 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 85 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 142
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 143 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 202
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 203 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 262
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 263 ADSRPKFRELI 273
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 54/307 (17%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
L ++YM +G G G V+ +D + VAIK++ L + + + ++EI +++ L+
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLD 66
Query: 76 HKNIVKY--------------LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLV 121
H NIVK +GSL + ++I+ EY+E LAN+++ GP E
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQ---GPLLEEHA 122
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLV-KLADFGVATKL-TEADVNTHSV 179
+++ Q+L GL Y+H V+HRD+K AN+ E LV K+ DFG+A + H
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 180 VG--TPYWMAPE-VIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIV- 232
G T ++ +P ++ + A D+W+ GC E+LT + +EL+ M + +
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 233 -------QDERPPIPESLSPDIT------------------DFLRQCFKKDARQRPDAKT 267
Q+ IP + D+T DFL Q R A+
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302
Query: 268 LLSHPWI 274
LSHP++
Sbjct: 303 ALSHPYM 309
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 26 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 85
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 86 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 134
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 135 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 193
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 194 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 253
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 254 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 313
Query: 293 NVEE 296
+E
Sbjct: 314 EDKE 317
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 10 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 69
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 70 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPC 178
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 179 Y-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 238 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
Query: 293 NVEE 296
+E
Sbjct: 298 EDKE 301
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 71
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 72 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 179
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 180 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 240 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
Query: 293 NVEE 296
+E
Sbjct: 300 EDKE 303
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 18 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 77
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 78 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 126
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 127 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 185
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 186 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 245
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 246 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 305
Query: 293 NVEE 296
+E
Sbjct: 306 EDKE 309
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 86 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 143
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 144 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 203
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 204 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 263
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 264 ADSRPKFRELI 274
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 16 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 75
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 76 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 124
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 125 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 183
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 184 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 243
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 244 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 303
Query: 293 NVEE 296
+E
Sbjct: 304 EDKE 307
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 76 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 133
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 134 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 193
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 194 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 253
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 254 ADSRPKFRELI 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 27/297 (9%)
Query: 6 TTSAFHKSKTLDNKYMLGDEIGKGAYGR----VYKGLDLENGDFVAIKQVSLENIAQEDL 61
T + + +S + Y++ + IG G+Y V+K ++E A+K + + ++ D
Sbjct: 15 TENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNME----YAVKVI---DKSKRDP 67
Query: 62 NIIMQEID-LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
+ +EI+ LL+ H NI+ H++++ E + G L + I KF F E
Sbjct: 68 S---EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSERE 122
Query: 121 VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEG----LVKLADFGVATKLTEADVNT 176
+ + + + + YLH QGV+HRD+K +NIL E +++ DFG A +L +
Sbjct: 123 ASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 177 HSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYEL---QPMPALFRIVQ 233
+ T ++APEV++ G DIWS+G + +L P+ P L RI
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGS 242
Query: 234 DE---RPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
+ ++S D + + D QR AK +L HPW+ + QS L H
Sbjct: 243 GKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSH 299
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 12 KSKTLDNKYMLGDEI-GKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQE--- 67
K + + Y L ++ G G G+V + G A+K + A+++++ Q
Sbjct: 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG 81
Query: 68 ------IDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLV 121
+D+ +N++H + L II+E +E G L + I+ F E
Sbjct: 82 PHIVCILDVYENMHHG-----------KRCLLIIMECMEGGELFSRIQERGDQAFTEREA 130
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHS 178
A + + + +LH + HRD+K N+L T K+ ++KL DFG A + T+ + T
Sbjct: 131 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 190
Query: 179 VVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIV 232
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+
Sbjct: 191 Y--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 233 QDERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
Q P P +S D +R K D +R ++HPWI Q+ L T
Sbjct: 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TA 305
Query: 292 RNVEENGSADAEIPSE 307
R ++E+ E+ E
Sbjct: 306 RVLQEDKDHWDEVKEE 321
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 17 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 76
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 77 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 125
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 126 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 184
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 185 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 244
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 245 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 304
Query: 293 NVEE 296
+E
Sbjct: 305 EDKE 308
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 71
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 72 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 121 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 179
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 180 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 239
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 240 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 299
Query: 293 NVEE 296
+E
Sbjct: 300 EDKE 303
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 10 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 69
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 70 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 118
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 119 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 177
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 178 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 237
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 238 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 297
Query: 293 NVEE 296
+E
Sbjct: 298 EDKE 301
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 209 TVDIWSVGCIMAELLT 224
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 100 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 155
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 156 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 213 TVDIWSVGCIMAELLT 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 11 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCP 70
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I++E ++ G L + I+ F E +
Sbjct: 71 HIVRIVDVYENL-------YAG----RKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 119
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ + E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 120 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 178
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIVQ 233
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+ Q
Sbjct: 179 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 238
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR ++HPWI + Q+ L S ++
Sbjct: 239 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 298
Query: 293 NVEE 296
+E
Sbjct: 299 EDKE 302
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 165
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 223 TVDIWSVGCIMAELLT 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IGKG +G V G D G+ VA+K + + AQ + E ++ L H N+V+ LG
Sbjct: 29 IGKGEFGDVMLG-DY-RGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGV 82
Query: 86 L-KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + + L+I+ EY+ GSL + ++ + + V E + YL +HRD
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
+ N+L +++ + K++DFG LT+ +T P W APE + SD+W
Sbjct: 143 LAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 204 SVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + E+ + PY + + R+ + + P+ P + + ++ C+ DA R
Sbjct: 199 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 258
Query: 263 P 263
P
Sbjct: 259 P 259
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 8/250 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLE---NIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G GA+G VYKGL + G+ V I +E + + I+ E ++ ++++ ++ +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++H
Sbjct: 117 LGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLVH 174
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAAS 200
RD+ N+L VK+ DFG+A L + H+ G P WMA E I S
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 201 DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ DA
Sbjct: 235 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDA 294
Query: 260 RQRPDAKTLL 269
RP + L+
Sbjct: 295 DSRPKFRELI 304
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 199 TVDIWSVGCIMAELLT 214
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIK---QVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G GA+G VYKG+ + +G+ V I +V EN + + I+ E ++ + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
LG T S + ++ + + G L + ++ N+ G + + Q+ +G+ YL + ++H
Sbjct: 85 LGICLT-STVQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQIAKGMSYLEDVRLVH 142
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAAS 200
RD+ N+L VK+ DFG+A L + H+ G P WMA E I S
Sbjct: 143 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQS 202
Query: 201 DIWSVGCTVIELLTCVPPYYELQP---MPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
D+WS G TV EL+T Y+ P +P L + ER P P + D+ + +C+
Sbjct: 203 DVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE--KGERLPQPPICTIDVYMIMVKCWMI 260
Query: 258 DARQRPDAKTLLSH 271
D+ RP + L+S
Sbjct: 261 DSECRPRFRELVSE 274
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 13/241 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IGKG +G V G D G+ VA+K + + AQ + E ++ L H N+V+ LG
Sbjct: 14 IGKGEFGDVMLG-DY-RGNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQLLGV 67
Query: 86 L-KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ + + L+I+ EY+ GSL + ++ + + V E + YL +HRD
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY-WMAPEVIEMSGVCAASDIW 203
+ N+L +++ + K++DFG LT+ +T P W APE + SD+W
Sbjct: 128 LAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 204 SVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQR 262
S G + E+ + PY + + R+ + + P+ P + + ++ C+ DA R
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMR 243
Query: 263 P 263
P
Sbjct: 244 P 244
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 12 KSKTLDNKYMLGDEI-GKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQE--- 67
K + + Y L ++ G G G+V + G A+K + A+++++ Q
Sbjct: 3 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG 62
Query: 68 ------IDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLV 121
+D+ +N++H + L II+E +E G L + I+ F E
Sbjct: 63 PHIVCILDVYENMHH-----------GKRCLLIIMECMEGGELFSRIQERGDQAFTEREA 111
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHS 178
A + + + +LH + HRD+K N+L T K+ ++KL DFG A + T+ + T
Sbjct: 112 AEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC 171
Query: 179 VVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE-----LQP-MPALFRIV 232
TPY++APEV+ + D+WS+G + LL PP+Y + P M R+
Sbjct: 172 Y--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 233 QDERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
Q P P +S D +R K D +R ++HPWI Q+ L T
Sbjct: 230 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TA 286
Query: 292 RNVEENGSADAEIPSE 307
R ++E+ E+ E
Sbjct: 287 RVLQEDKDHWDEVKEE 302
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 5/255 (1%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
Y L IGKG + +V + G VA+K + + L + +E+ + K LNH NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 80 VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
VK ++T L+++ EY G + + + + G E Q++ + Y H++
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--GRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAA 199
++HRD+K N+L + +K+ADFG + + T + + G P + APE+ +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN-KLDAFCGAPPYAAPELFQGKKYDGP 192
Query: 200 S-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
D+WS+G + L++ P ++ Q + L V + IP S D + L++ +
Sbjct: 193 EVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLILN 251
Query: 259 ARQRPDAKTLLSHPW 273
+R + + W
Sbjct: 252 PSKRGTLEQIXKDRW 266
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 164
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 222 TVDIWSVGCIMAELLT 237
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 5 TTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII 64
+ TSA + + N Y L IGKG + +V + G VA+K + + L +
Sbjct: 3 SITSATDEQPHIGN-YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL 61
Query: 65 MQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVY 124
+E+ ++K LNH NIVK ++T L++++EY G + + + + G E
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAK 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY 184
Q++ + Y H++ ++HRD+K N+L + +K+ADFG + + T + + G+P
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN-KLDTFCGSPP 178
Query: 185 WMAPEVIEMSGVCAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESL 243
+ APE+ + D+WS+G + L++ P ++ Q + L V + IP +
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKYRIPFYM 237
Query: 244 SPD 246
S D
Sbjct: 238 STD 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+GA G V ++ + VA+K V ++ NI +EI + K LNH+N+VK+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI-KKEICINKMLNHENVVKFYGH 72
Query: 86 LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDI 145
+ + ++ LEY G L + I+P+ P P++ + Q++ G+VYLH G+ HRDI
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA--QRFFHQLMAGVVYLHGIGITHRDI 130
Query: 146 KGANILTTKEGLVKLADFGVAT--KLTEADVNTHSVVGTPYWMAPEVIEMSGVCAAS-DI 202
K N+L + +K++DFG+AT + + + + GT ++APE+++ A D+
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 203 WSVGCTVIELLTCVPPY 219
WS G + +L P+
Sbjct: 191 WSCGIVLTAMLAGELPW 207
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 165
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 223 TVDIWSVGCIMAELLT 238
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 15/275 (5%)
Query: 1 MSRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED 60
+R+ S H K + + GD G+ YGR+ + + VAIK + ++
Sbjct: 42 FTREIEASRIHIEKIIGS----GDS-GEVCYGRLR--VPGQRDVPVAIKALKAGYTERQR 94
Query: 61 LNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIIL-EYVENGSLANIIKPNKFGPFPES 119
+ + E ++ +H NI++ G + TR L +I+ EY+ENGSL ++ + G F
Sbjct: 95 RDF-LSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIM 151
Query: 120 LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV 179
+ + V G+ YL + G +HRD+ N+L + K++DFG++ L + ++
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 180 VGTPY---WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDE 235
G W APE I +ASD+WS G + E+L PY+ + + + +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
Query: 236 RPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
R P P + + C+ KD QRP ++S
Sbjct: 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 18/267 (6%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
++Y +IG G +G D + VA+K + E A D N+ +EI ++L H
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENV-QREIINHRSLRHP 76
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
NIV++ + T +HL II+EY G L I G F E + Q+L G+ Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 138 QGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---E 192
+ HRD+K N L + +K+ DFG +K + S VGTP ++APEV+ E
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGY-SKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQ---DERPPIPES--LSPDI 247
G A D+WS G T+ +L P+ + + + +Q + IP+ +SP+
Sbjct: 194 YDGKIA--DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 248 TDFLRQCFKKDARQRPDAKTLLSHPWI 274
+ + F D R + +H W
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 199 TVDIWSVGCIMAELLT 214
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
IG GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 150
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 208 TVDIWSVGCIMAELLT 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+ GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I++ + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 89 LLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 146
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 267 ADSRPKFRELI 277
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 89 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 146
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 267 ADSRPKFRELI 277
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 26 IGKGAYGRVYKG-LDLENGDFVAIKQVSLE-NIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
IG G +G V G L L VA+ +L+ ++ + E ++ +H N+V
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
G + + I++E++ENG+L ++ + G F + + + G+ YL + G +HR
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAAS 200
D+ NIL + K++DFG++ + + ++ G W APE I+ +AS
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 201 DIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
D+WS G + E+++ PY+++ + I + R P P + + C++K+
Sbjct: 230 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKER 289
Query: 260 RQRPDAKTLLS 270
+RP + ++
Sbjct: 290 AERPKFEQIVG 300
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 209 TVDIWSVGCIMAELLT 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 147
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 148 IIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 205 TVDIWSVGCIMAELLT 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 22 LGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
LG +G+GA+G+V + G+D VA+K + E + +M E+ +L ++ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 77 K-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPFP---------ESLVAV 123
N+V LG+ K L +I+E+ + G+L+ + K N+F P+ E L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC- 148
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGT 182
Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 183 PY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIVQDERPPI 239
P WMAPE I SD+WS G + E+ + Y + F R+ + R
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 268
Query: 240 PESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P+ +P++ + C+ + QRP L+ H
Sbjct: 269 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKXQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 209 TVDIWSVGCIMAELLT 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+G GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 9 AFHKSKTLDNKYMLGDE------IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLN 62
A K+++ D + +GDE IG GAYG V G VAIK++ +
Sbjct: 40 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 99
Query: 63 IIMQEIDLLKNLNHKNIVKY---------LGSLKTRSHLHIILEYVENGSLANIIKPNKF 113
++E+ +LK+ H NI+ G K+ ++++L+ +E+ L II ++
Sbjct: 100 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS---VYVVLDLMES-DLHQIIHSSQ- 154
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL---- 169
P V ++ Q+L GL Y+H VIHRD+K +N+L + +K+ DFG+A L
Sbjct: 155 -PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 213
Query: 170 TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASDIWSVGCTVIELLT 214
E V T ++ APE+ + + A D+WSVGC E+L
Sbjct: 214 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 168
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 226 TVDIWSVGCIMAELLT 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 146/308 (47%), Gaps = 43/308 (13%)
Query: 6 TTSAFHKSKTLDNKYMLGDEI-GKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII 64
+T +F S ++ Y L +++ G+GA+ RV ++L A+K + E + +
Sbjct: 2 STDSF--SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRV 57
Query: 65 MQEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGS-LANIIKPNKFGPFPESLVA 122
+E+++L H+N+++ + + +++ E + GS L++I K F S+V
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVV 117
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILT---TKEGLVKLADFGVATKLT-EADVNTHS 178
+A L+ +LH +G+ HRD+K NIL + VK+ DFG+ + + D + S
Sbjct: 118 QDVASALD---FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 179 V------VGTPYWMAPEVIEMSGVCAA-----SDIWSVGCTVIELLTCVPPYY------- 220
G+ +MAPEV+E A+ D+WS+G + LL+ PP+
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 221 ---ELQPMPA----LFRIVQDERPPIPES----LSPDITDFLRQCFKKDARQRPDAKTLL 269
+ PA LF +Q+ + P+ +S D + + +DA+QR A +L
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 270 SHPWIQNC 277
HPW+Q C
Sbjct: 295 QHPWVQGC 302
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 157
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 215 TVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 157
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 215 TVDIWSVGCIMAELLT 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 209 TVDIWSVGCIMAELLT 224
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 150
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 208 TVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 89 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 145 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 202 TVDIWSVGCIMAELLT 217
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 150
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 151 IIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 208 TVDIWSVGCIMAELLT 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 150
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 151 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 208 TVDIWSVGCIMAELLT 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLV-THLMGADLNNIVKCAKLT---DDHVQFLIYQILRGLKYIHSAD 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 199 TVDIWSVGCIMAELLT 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 147
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 205 TVDIWSVGCIMAELLT 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 165
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 166 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 223 TVDIWSVGCIMAELLT 238
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 147
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 205 TVDIWSVGCIMAELLT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 152
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 210 TVDIWSVGCIMAELLT 225
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ E +ENGSL + ++ + F + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 164
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 165 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 222 TVDIWSVGCIMAELLT 237
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 24/272 (8%)
Query: 22 LGDEIGKGAYGRVYK----GLD-LENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNH 76
LG +G+GA+G+V + G+D VA+K + E + +M E+ +L ++ H
Sbjct: 31 LGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 77 K-NIVKYLGSL-KTRSHLHIILEYVENGSLANII--KPNKFGPFP---------ESLVAV 123
N+V LG+ K L +I+E+ + G+L+ + K N+F P+ E L+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX- 148
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGT 182
Y QV +G+ +L + IHRD+ NIL +++ +VK+ DFG+A + + D
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 183 PY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF--RIVQDERPPI 239
P WMAPE I SD+WS G + E+ + Y + F R+ + R
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRA 268
Query: 240 PESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P+ +P++ + C+ + QRP L+ H
Sbjct: 269 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 147
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 148 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 205 TVDIWSVGCIMAELLT 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 156
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 157 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 214 TVDIWSVGCIMAELLT 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 156
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 157 IIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 214 TVDIWSVGCIMAELLT 229
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 142 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 199 TVDIWSVGCIMAELLT 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 157
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 158 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 215 TVDIWSVGCIMAELLT 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 168
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 169 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 226 TVDIWSVGCIMAELLT 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 142
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 200 TVDIWSVGCIMAELLT 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 88 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 143
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 144 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 201 TVDIWSVGCIMAELLT 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 26/226 (11%)
Query: 9 AFHKSKTLDNKYMLGDE------IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLN 62
A K+++ D + +GDE IG GAYG V G VAIK++ +
Sbjct: 39 ALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK 98
Query: 63 IIMQEIDLLKNLNHKNIVKY---------LGSLKTRSHLHIILEYVENGSLANIIKPNKF 113
++E+ +LK+ H NI+ G K+ ++++L+ +E+ L II ++
Sbjct: 99 RTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS---VYVVLDLMES-DLHQIIHSSQ- 153
Query: 114 GPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL---- 169
P V ++ Q+L GL Y+H VIHRD+K +N+L + +K+ DFG+A L
Sbjct: 154 -PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Query: 170 TEADVNTHSVVGTPYWMAPEV-IEMSGVCAASDIWSVGCTVIELLT 214
E V T ++ APE+ + + A D+WSVGC E+L
Sbjct: 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 142
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A D V T ++ APE+ +
Sbjct: 143 IIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 200 TVDIWSVGCIMAELLT 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 32/279 (11%)
Query: 8 SAFHKSK--TL-DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL-----ENIAQE 59
S F KS+ TL DN+ +IGKG +G V+KG +++ VAIK + L E E
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 60 DLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPES 119
+E+ ++ NLNH NIVK G + + ++E+V G L + + +K P S
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWS 122
Query: 120 LVAVYIAQVLEGLVYLHEQG--VIHRDIKGANIL-----TTKEGLVKLADFGVATKLTEA 172
+ + + G+ Y+ Q ++HRD++ NI K+ADFG++ +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ---- 178
Query: 173 DVNTHSV---VGTPYWMAPEVI--EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPA 227
+ HSV +G WMAPE I E +D +S + +LT P+ E
Sbjct: 179 --SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 228 LF-RIVQDE--RPPIPESLSPDITDFLRQCFKKDARQRP 263
F ++++E RP IPE P + + + C+ D ++RP
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 15/275 (5%)
Query: 1 MSRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED 60
+R+ S H K + + GD G+ YGR+ + + VAIK + ++
Sbjct: 42 FTREIEASRIHIEKIIGS----GDS-GEVCYGRLR--VPGQRDVPVAIKALKAGYTERQR 94
Query: 61 LNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIIL-EYVENGSLANIIKPNKFGPFPES 119
+ + E ++ +H NI++ G + TR L +I+ EY+ENGSL ++ + G F
Sbjct: 95 RDF-LSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIM 151
Query: 120 LVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV 179
+ + V G+ YL + G +HRD+ N+L + K++DFG++ L + +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 180 VGTPY---WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDE 235
G W APE I +ASD+WS G + E+L PY+ + + + +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY 271
Query: 236 RPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
R P P + + C+ KD QRP ++S
Sbjct: 272 RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 152
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A AD T V T ++ APE+ +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMT-GYVATRWYRAPEIMLNWMHYNQ 209
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 210 TVDIWSVGCIMAELLT 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKSQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+ D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDSELKILDFGLC---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 152
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A AD T V T ++ APE+ +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMT-GYVATRWYRAPEIMLNWMHYNQ 209
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 210 TVDIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 152
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DFG+A AD T V T ++ APE+ +
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARH--TADEMT-GYVATRWYRAPEIMLNWMHYNQ 209
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 210 TVDIWSVGCIMAELLT 225
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 26 IGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
+G G +G V G L + VAIK + + ++ + + E ++ +H NI++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF-LGEASIMGQFDHPNIIRL 111
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + I+ E +ENGSL + ++ + LV + + + G+ YL + G +H
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LRGIASGMKYLSDMGYVH 170
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W +PE I +A
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+E+ + + + R P P + + C++KD
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKD 290
Query: 259 ARQRPDAKTLLS 270
RP + ++S
Sbjct: 291 RNNRPKFEQIVS 302
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+ GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 89 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 146
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 147 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 206
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 207 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 266
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 267 ADSRPKFRELI 277
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 27/292 (9%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGR----VYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQ 66
H + + Y++ + IG G+Y V+K ++E A+K + + ++ D + +
Sbjct: 20 HMNLVFSDGYVVKETIGVGSYSECKRCVHKATNME----YAVKVI---DKSKRDPS---E 69
Query: 67 EID-LLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYI 125
EI+ LL+ H NI+ H++++ E + G L + I KF F E + +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVL 127
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEG----LVKLADFGVATKLTEADVNTHSVVG 181
+ + + YLH QGV+HRD+K +NIL E +++ DFG A +L + +
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY 187
Query: 182 TPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYEL---QPMPALFRIVQDE--- 235
T ++APEV++ G DIWS+G + +L P+ P L RI +
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 236 RPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRH 287
++S D + + D QR AK +L HPW+ + QS L H
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSH 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQV--SLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+GA+G V + L+N D V ++ E + + + +E D+L N + K I
Sbjct: 82 IGRGAFGEV-AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKF-GPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ + ++L+++++Y G L ++ +KF PE + Y+A+++ + +H+ +H
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTE-ADVNTHSVVGTPYWMAPEVIE-MSG----V 196
RDIK NIL G ++LADFG KL E V + VGTP +++PE+++ M G
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 197 CAASDIWSVGCTVIELLTCVPPYY 220
D WS+G + E+L P+Y
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFY 282
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 25 EIGKGAYGRVYKG-----LDLENGDFVAIKQVSLENIAQEDLNIIMQ-EIDLLKNLNHKN 78
+IG+GA+GRV++ L E VA+K + E A D+ Q E L+ ++ N
Sbjct: 54 DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPN 111
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIK---PNKF-----------------GPFPE 118
IVK LG + ++ EY+ G L ++ P+ GP P
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 119 SLVA-VYIA-QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD-VN 175
S + IA QV G+ YL E+ +HRD+ N L + +VK+ADFG++ + AD
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 176 THSVVGTPY-WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQ 233
P WM PE I + SD+W+ G + E+ + + PYY + ++ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD 291
Query: 234 DERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN-CRRA 280
PE+ ++ + +R C+ K RP ++ H +Q C RA
Sbjct: 292 GNILACPENCPLELYNLMRLCWSKLPADRPSFCSI--HRILQRMCERA 337
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQE---IDLLKNLNHKNIVK 81
IG+G +G VY + G A+K + + I ++ + + E + L+ + IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ T L IL+ + G L + ++ G F E+ + Y A+++ GL ++H + V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVC--AA 199
+RD+K ANIL + G V+++D G+A ++ H+ VGT +MAPEV++ GV ++
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ-KGVAYDSS 371
Query: 200 SDIWSVGCTVIELLTCVPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
+D +S+GC + +LL P+ ++ + + R+ +P+S SP++ L ++
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 258 DARQR 262
D +R
Sbjct: 432 DVNRR 436
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
++Y L +IG G +G D ++ + VA+K + E+ + +EI ++L H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN---VKREIINHRSLRHP 75
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
NIV++ + T +HL I++EY G L I G F E + Q++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 138 QGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---E 192
V HRD+K N L + +K+ FG +K + S VGTP ++APEV+ E
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGY-SKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI----VQDERPPIPE--SLSPD 246
G A D+WS G T+ +L P+ + + P FR + + + IP+ +SP+
Sbjct: 193 YDGKVA--DVWSCGVTLYVMLVGAYPFEDPEE-PKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + F D +R + +H W + L + L + TM
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFL---KNLPADLMNDNTM 291
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQE---IDLLKNLNHKNIVK 81
IG+G +G VY + G A+K + + I ++ + + E + L+ + IV
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ T L IL+ + G L + ++ G F E+ + Y A+++ GL ++H + V+
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVC--AA 199
+RD+K ANIL + G V+++D G+A ++ H+ VGT +MAPEV++ GV ++
Sbjct: 314 YRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ-KGVAYDSS 370
Query: 200 SDIWSVGCTVIELLTCVPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
+D +S+GC + +LL P+ ++ + + R+ +P+S SP++ L ++
Sbjct: 371 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 430
Query: 258 DARQR 262
D +R
Sbjct: 431 DVNRR 435
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 5 TTTSAFHKSKTLDNKYMLGDEI-GKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQED 60
+T + +K LD + D++ G G +G V G L + VAIK + + ++
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 61
Query: 61 LNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
+ + E ++ +H NI++ G + + I+ E +ENGSL + ++ + L
Sbjct: 62 RDF-LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL 120
Query: 121 VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV 180
V + + + G+ YL + G +HRD+ NIL + K++DFG++ L + ++
Sbjct: 121 VGM-LRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 181 GTPY---WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDER 236
G W +PE I +ASD+WS G + E+++ PY+E+ + + + R
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR 239
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
P P + + C++KD RP + ++S
Sbjct: 240 LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 26 IGKGAYGRVYKGLDLENGDFV----AIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVK 81
+ GA+G VYKGL + G+ V AIK++ E + + I+ E ++ ++++ ++ +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
LG T S + +I + + G L + ++ +K + L+ + Q+ +G+ YL ++ ++
Sbjct: 82 LLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQIAKGMNYLEDRRLV 139
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY-WMAPEVIEMSGVCAA 199
HRD+ N+L VK+ DFG+A L + H+ G P WMA E I
Sbjct: 140 HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQ 199
Query: 200 SDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQD-ERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G TV EL+T Y+ P + I++ ER P P + D+ + +C+ D
Sbjct: 200 SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMID 259
Query: 259 ARQRPDAKTLL 269
A RP + L+
Sbjct: 260 ADSRPKFRELI 270
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 32/279 (11%)
Query: 8 SAFHKSK--TL-DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL-----ENIAQE 59
S F KS+ TL DN+ +IGKG +G V+KG +++ VAIK + L E E
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 60 DLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPES 119
+E+ ++ NLNH NIVK G + + ++E+V G L + + +K P S
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWS 122
Query: 120 LVAVYIAQVLEGLVYLHEQG--VIHRDIKGANIL-----TTKEGLVKLADFGVATKLTEA 172
+ + + G+ Y+ Q ++HRD++ NI K+ADFG + +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ---- 178
Query: 173 DVNTHSV---VGTPYWMAPEVI--EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPA 227
+ HSV +G WMAPE I E +D +S + +LT P+ E
Sbjct: 179 --SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 228 LF-RIVQDE--RPPIPESLSPDITDFLRQCFKKDARQRP 263
F ++++E RP IPE P + + + C+ D ++RP
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFV--AIKQVSLENIAQEDLNIIMQEIDLLKNLNHK-NIV 80
D IG+G +G+V K ++G + AIK++ E +++D E+++L L H NI+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKF--------------GPFPESLVAVYIA 126
LG+ + R +L++ +EY +G+L + ++ ++ + + A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--PY 184
V G+ YL ++ IHRD+ NIL + + K+ADFG++ +V +G
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMGRLPVR 206
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESL 243
WMA E + S SD+WS G + E+++ PY + ++ Q R P +
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 266
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLL 269
++ D +RQC+++ +RP +L
Sbjct: 267 DDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQE---IDLLKNLNHKNIVK 81
IG+G +G VY + G A+K + + I ++ + + E + L+ + IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ T L IL+ + G L + ++ G F E+ + Y A+++ GL ++H + V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVC--AA 199
+RD+K ANIL + G V+++D G+A ++ H+ VGT +MAPEV++ GV ++
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ-KGVAYDSS 371
Query: 200 SDIWSVGCTVIELLTCVPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
+D +S+GC + +LL P+ ++ + + R+ +P+S SP++ L ++
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 258 DARQR 262
D +R
Sbjct: 432 DVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 128/245 (52%), Gaps = 13/245 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIA-QEDLNIIMQE---IDLLKNLNHKNIVK 81
IG+G +G VY + G A+K + + I ++ + + E + L+ + IV
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 82 YLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVI 141
+ T L IL+ + G L + ++ G F E+ + Y A+++ GL ++H + V+
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 142 HRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVC--AA 199
+RD+K ANIL + G V+++D G+A ++ H+ VGT +MAPEV++ GV ++
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQ-KGVAYDSS 371
Query: 200 SDIWSVGCTVIELLTCVPPY--YELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKK 257
+D +S+GC + +LL P+ ++ + + R+ +P+S SP++ L ++
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431
Query: 258 DARQR 262
D +R
Sbjct: 432 DVNRR 436
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D VA+K++S + +E+ LLK+L H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
S++ S ++++ + L NI+K + V + Q+L GL Y+H G
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALS---DEHVQFLVYQLLRGLKYIHSAG 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +++ DFG+A +AD V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLS 244
DIWSVGC + ELL + + L RI++ P PE L+
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 254
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ D+G+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDYGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 16/218 (7%)
Query: 2 SRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL 61
S Q S F T+ +Y IG GA G V D G VA+K++S Q
Sbjct: 10 SVQVADSTF----TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 65
Query: 62 NIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGP 115
+E+ LLK +NHKNI+ L +L+ +++++E + + +L +I
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---- 120
Query: 116 FPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + +
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM 180
Query: 176 THSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
T VV T Y+ APEVI G DIWSVGC + EL+
Sbjct: 181 TPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 24/266 (9%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFV--AIKQVSLENIAQEDLNIIMQEIDLLKNL-NHKNIV 80
D IG+G +G+V K ++G + AIK++ E +++D E+++L L +H NI+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKF--------------GPFPESLVAVYIA 126
LG+ + R +L++ +EY +G+L + ++ ++ + + A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--PY 184
V G+ YL ++ IHRD+ NIL + + K+ADFG++ +V +G
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMGRLPVR 196
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESL 243
WMA E + S SD+WS G + E+++ PY + ++ Q R P +
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 256
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLL 269
++ D +RQC+++ +RP +L
Sbjct: 257 DDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 73
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 132
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E D G
Sbjct: 133 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 252
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + + RP
Sbjct: 253 NCPERVTDLMRMCWQFNPKMRP 274
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIK--QVSLENIAQEDLNIIMQ---- 66
+K KY D IG+G V + + G A+K +V+ E ++ E L + +
Sbjct: 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRR 148
Query: 67 EIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYI 125
E +L+ + H +I+ + S ++ S + ++ + + G L + + E +
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIM 206
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYW 185
+LE + +LH ++HRD+K NIL ++L+DFG + L E + GTP +
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL-EPGEKLRELCGTPGY 265
Query: 186 MAPEVIEMS------GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER--- 236
+APE+++ S G D+W+ G + LL PP++ + + L I++ +
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
P + S + D + + + D R A+ L HP+ +
Sbjct: 326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID-LLKNLNHKN 78
Y + ++IG G+Y + + A+K + + ++ D +EI+ LL+ H N
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKII---DKSKRDPT---EEIEILLRYGQHPN 77
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+ +++++ E ++ G L + I KF F E + + + + + YLH Q
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQ 135
Query: 139 GVIHRDIKGANILTTKEG----LVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
GV+HRD+K +NIL E +++ DFG A +L + + T ++APEV+E
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ 195
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDE---RPPIPESLSPDIT 248
G AA DIWS+G + +LT P+ + P L RI + S+S
Sbjct: 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWI 274
D + + D QR A +L HPWI
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 76
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E D G
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + + RP
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRP 277
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 75
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 134
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E D G
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 254
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + + RP
Sbjct: 255 NCPERVTDLMRMCWQFNPKMRP 276
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D VA+K++S + +E+ LLK+L H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
S++ S ++++ + L NI+K + V + Q+L GL Y+H G
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALS---DEHVQFLVYQLLRGLKYIHSAG 151
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +++ DFG+A +AD V T ++ APE+ +
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLS 244
DIWSVGC + ELL + + L RI++ P PE L+
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 254
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ DF +A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDFYLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 18/265 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GA+ V + G A+K ++ + + + +++ +E D+L N + + I +
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF 128
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGP-FPESLVAVYIAQVLEGLVYLHEQGVIHR 143
+ + ++L++++EY G L ++ +KFG P + Y+A+++ + +H G +HR
Sbjct: 129 AFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 144 DIKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVIE-------MSG 195
DIK NIL + G ++LADFG KL + V + VGTP +++PE+++
Sbjct: 187 DIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGS 246
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDER----PPIPESLSPDITDFL 251
D W++G E+ P+Y +IV + P + E + + DF+
Sbjct: 247 YGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI 306
Query: 252 RQ--CFKKDARQRPDAKTLLSHPWI 274
++ C + R A +HP+
Sbjct: 307 QRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 91.3 bits (225), Expect = 4e-18, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 17 DNKYMLGDEIGKGAYGRVYKG---LDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
DN + E+G G +G V +G + + D VAIK V + + D +M+E ++
Sbjct: 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQID-VAIK-VLKQGTEKADTEEMMREAQIMHQ 66
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLV 133
L++ IV+ +G + + L +++E G L + K P S VA + QV G+
Sbjct: 67 LDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMK 124
Query: 134 YLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTPY-WMAPEV 190
YL E+ +HRD+ N+L K++DFG++ L D S P W APE
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 191 IEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITD 249
I + SD+WS G T+ E L+ PY +++ + I Q +R P P++
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA 244
Query: 250 FLRQCFKKDARQRPDAKTL 268
+ C+ RPD T+
Sbjct: 245 LMSDCWIYKWEDRPDFLTV 263
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 17 DNKYMLGDEIGKGAYGRVYKGL-DLENGDF-VAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
DN + E+G G +G V +G+ + VAIK V + + D +M+E ++ L
Sbjct: 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIK-VLKQGTEKADTEEMMREAQIMHQL 393
Query: 75 NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVY 134
++ IV+ +G + + L +++E G L + K P S VA + QV G+ Y
Sbjct: 394 DNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKY 451
Query: 135 LHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEAD--VNTHSVVGTPY-WMAPEVI 191
L E+ +HR++ N+L K++DFG++ L D S P W APE I
Sbjct: 452 LEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 192 EMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDITDF 250
+ SD+WS G T+ E L+ PY +++ + I Q +R P P++
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYAL 571
Query: 251 LRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSL 285
+ C+ RPD T+ ++ C +L S +
Sbjct: 572 MSDCWIYKWEDRPDFLTVEQR--MRACYYSLASKV 604
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D VA+K++S + +E+ LLK+L H+N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
S++ S ++++ + L NI+K + V + Q+L GL Y+H G
Sbjct: 88 FTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALS---DEHVQFLVYQLLRGLKYIHSAG 143
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +++ DFG+A +AD V T ++ APE+ +
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 199 ASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLS 244
DIWSVGC + ELL + + L RI++ P PE L+
Sbjct: 201 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLA 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 23/285 (8%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
++Y L +IG G +G D ++ + VA+K + E+ + +EI ++L H
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN---VKREIINHRSLRHP 75
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
NIV++ + T +HL I++EY G L I G F E + Q++ G+ Y H
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 138 QGVIHRDIKGANILT--TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI---E 192
V HRD+K N L + +K+ FG +K + VGTP ++APEV+ E
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGY-SKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 193 MSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRI----VQDERPPIPE--SLSPD 246
G A D+WS G T+ +L P+ + + P FR + + + IP+ +SP+
Sbjct: 193 YDGKVA--DVWSCGVTLYVMLVGAYPFEDPEE-PKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 247 ITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTM 291
+ + F D +R + +H W + L + L + TM
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWFL---KNLPADLMNDNTM 291
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+ Y + +E+G GA+G V++ + G+ A K V + + D + +EI + L H
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHP 108
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+V + + + + +I E++ G L + ++ E Y+ QV +GL ++HE
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 138 QGVIHRDIKGANIL--TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
+H D+K NI+ T + +KL DFG+ L + + GT + APEV E
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEGKP 226
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES----LSPDITDFL 251
V +D+WSVG LL+ + P+ L R V+ + +S +S D DF+
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 252 RQCFKKDARQRPDAKTLLSHPWI 274
R+ D R L HPW+
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWL 308
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 76
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E D G
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + + RP
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRP 277
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 32/279 (11%)
Query: 8 SAFHKSK--TL-DNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSL-----ENIAQE 59
S F KS+ TL DN+ +IGKG +G V+KG +++ VAIK + L E E
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 60 DLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPES 119
+E+ ++ NLNH NIVK G + + ++E+V G L + + +K P S
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWS 122
Query: 120 LVAVYIAQVLEGLVYLHEQG--VIHRDIKGANIL-----TTKEGLVKLADFGVATKLTEA 172
+ + + G+ Y+ Q ++HRD++ NI K+ADF ++ +
Sbjct: 123 VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ---- 178
Query: 173 DVNTHSV---VGTPYWMAPEVI--EMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPA 227
+ HSV +G WMAPE I E +D +S + +LT P+ E
Sbjct: 179 --SVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 228 LF-RIVQDE--RPPIPESLSPDITDFLRQCFKKDARQRP 263
F ++++E RP IPE P + + + C+ D ++RP
Sbjct: 237 KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 43/308 (13%)
Query: 6 TTSAFHKSKTLDNKYMLGDEI-GKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII 64
+T +F S ++ Y L +++ G+GA+ RV ++L A+K + E + +
Sbjct: 2 STDSF--SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRV 57
Query: 65 MQEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGS-LANIIKPNKFGPFPESLVA 122
+E+++L H+N+++ + + +++ E + GS L++I K F S+V
Sbjct: 58 FREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVV 117
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILT---TKEGLVKLADFGVATKLT-EADVNTHS 178
+A L+ +LH +G+ HRD+K NIL + VK+ DF + + + D + S
Sbjct: 118 QDVASALD---FLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 179 V------VGTPYWMAPEVIEMSGVCAA-----SDIWSVGCTVIELLTCVPPYY------- 220
G+ +MAPEV+E A+ D+WS+G + LL+ PP+
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 221 ---ELQPMPA----LFRIVQDERPPIPES----LSPDITDFLRQCFKKDARQRPDAKTLL 269
+ PA LF +Q+ + P+ +S D + + +DA+QR A +L
Sbjct: 235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294
Query: 270 SHPWIQNC 277
HPW+Q C
Sbjct: 295 QHPWVQGC 302
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 19/266 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID-LLKNLNHKN 78
Y + ++IG G+Y + + A+K I + +EI+ LL+ H N
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVK------IIDKSKRDPTEEIEILLRYGQHPN 77
Query: 79 IVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
I+ +++++ E + G L + I KF F E + + + + + YLH Q
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTVEYLHAQ 135
Query: 139 GVIHRDIKGANILTTKEG----LVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMS 194
GV+HRD+K +NIL E +++ DFG A +L + + T ++APEV+E
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQ 195
Query: 195 GVCAASDIWSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDE---RPPIPESLSPDIT 248
G AA DIWS+G + LT P+ + P L RI + S+S
Sbjct: 196 GYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAK 255
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWI 274
D + + D QR A +L HPWI
Sbjct: 256 DLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFV--AIKQVSLENIAQEDLNIIMQEIDLLKNLNHK-NIV 80
D IG+G +G+V K ++G + AIK++ E +++D E+++L L H NI+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 81 KYLGSLKTRSHLHIILEYVENGSLANIIKPNKF--------------GPFPESLVAVYIA 126
LG+ + R +L++ +EY +G+L + ++ ++ + + A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--PY 184
V G+ YL ++ IHR++ NIL + + K+ADFG++ +V +G
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMGRLPVR 203
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESL 243
WMA E + S SD+WS G + E+++ PY + ++ Q R P +
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC 263
Query: 244 SPDITDFLRQCFKKDARQRPDAKTLL 269
++ D +RQC+++ +RP +L
Sbjct: 264 DDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ FG+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILGFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 76
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E D G
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + RP
Sbjct: 256 NCPERVTDLMRMCWQFNPNMRP 277
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 9 AFHKSKTLDNKY------MLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDL 61
+F++ K + N + + G++ G+G +G VYKG N VA+K+++ + +I E+L
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEEL 64
Query: 62 NIIM-QEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESL 120
QEI + H+N+V+ LG L ++ Y NGSL + + P
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 121 VAVYIAQ-VLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGV--ATKLTEADVNTH 177
IAQ G+ +LHE IHRDIK ANIL + K++DFG+ A++ V
Sbjct: 125 XRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 178 SVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP 217
+VGT + APE + + SDI+S G ++E++T +P
Sbjct: 185 RIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLP 223
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLEN-IAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IGKG++G+V + A+K ++ + + + ++ + +E+ +++ L H +V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
S + + ++++ + G L ++ N F E V ++I +++ L YL Q +IHRD
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDYLQNQRIIHRD 140
Query: 145 IKGANILTTKEGLVKLADFGVATKL-TEADVNTHSVVGTPYWMAPEVI---EMSGVCAAS 200
+K NIL + G V + DF +A L E + T + GT +MAPE+ + +G A
Sbjct: 141 MKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFSSRKGAGYSFAV 198
Query: 201 DIWSVGCTVIELLTCVPPYY 220
D WS+G T ELL PY+
Sbjct: 199 DWWSLGVTAYELLRGRRPYH 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G G VAIK + ++ + + E ++ +H NI+
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF-LSEASIMGQFDHPNIIHL 95
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + II EY+ENGSL ++ N G F + + + G+ YL + +H
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W APE I +A
Sbjct: 155 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 214
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+++ + I + R P P + + C++K+
Sbjct: 215 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 274
Query: 259 ARQRP 263
RP
Sbjct: 275 RSDRP 279
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ D G+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDAGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 11/263 (4%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHK 77
+ Y + +E+G GA+G V++ + G+ A K V + + D + +EI + L H
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHP 214
Query: 78 NIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHE 137
+V + + + + +I E++ G L + ++ E Y+ QV +GL ++HE
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA-DEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 138 QGVIHRDIKGANIL--TTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSG 195
+H D+K NI+ T + +KL DFG+ L + + GT + APEV E
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 196 VCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPES----LSPDITDFL 251
V +D+WSVG LL+ + P+ L R V+ + +S +S D DF+
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETL-RNVKSCDWNMDDSAFSGISEDGKDFI 391
Query: 252 RQCFKKDARQRPDAKTLLSHPWI 274
R+ D R L HPW+
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWL 414
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 125/266 (46%), Gaps = 15/266 (5%)
Query: 18 NKYMLGDEIGKGAYGRVYKG-LDLENGDF--VAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
N +LG +G+G +G V +G L E+G VA+K + L+N +Q ++ + E +K+
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93
Query: 75 NHKNIVKYLGSLKTRSHLHI-----ILEYVENGSLANIIKPNKF--GP--FPESLVAVYI 125
+H N+++ LG S I IL +++ G L + ++ GP P + ++
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-VVGTPY 184
+ G+ YL + +HRD+ N + + V +ADFG++ K+ D + P
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLT-CVPPYYELQPMPALFRIVQDERPPIPES 242
W+A E + + SD+W+ G T+ E+ T + PY +Q ++ R PE
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPED 273
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTL 268
++ + + C++ D RP L
Sbjct: 274 CLDELYEIMYSCWRTDPLDRPTFSVL 299
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ D G+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDRGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL---- 74
+Y + IGKG++G+V K D + VA+K V E +EI +L++L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AAEEIRILEHLRKQD 154
Query: 75 --NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
N N++ L + R+H+ + E + + +L +IK NKF F LV + +L+ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 133 VYLHEQGVIHRDIKGANILTTKEGL--VKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
LH+ +IH D+K NIL ++G +K+ DFG + + ++ + + ++ APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVYTXIQSRFYRAPEV 270
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVP 217
I + D+WS+GC + ELLT P
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L SL+ ++I++E + + +L +I+ ++ + Q+
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME----LDHERMSYLLYQM 136
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 195
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL---- 74
+Y + IGKG++G+V K D + VA+K V E +EI +L++L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AAEEIRILEHLRKQD 154
Query: 75 --NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
N N++ L + R+H+ + E + + +L +IK NKF F LV + +L+ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 133 VYLHEQGVIHRDIKGANILTTKEGL--VKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
LH+ +IH D+K NIL ++G +K+ DFG + + ++ + + ++ APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVYTXIQSRFYRAPEV 270
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVP 217
I + D+WS+GC + ELLT P
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G G VAIK + ++ + + E ++ +H NI+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF-LSEASIMGQFDHPNIIHL 80
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + II EY+ENGSL ++ N G F + + + G+ YL + +H
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W APE I +A
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 199
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+++ + I + R P P + + C++K+
Sbjct: 200 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 259
Query: 259 ARQRP 263
RP
Sbjct: 260 RSDRP 264
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
+G GAYG V D + G VA+K++S + +E+ LLK++ H+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 85 -----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
SL+ + ++++ ++ L NI+K K + V I Q+L GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLV-THLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSAD 145
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV-IEMSGVCA 198
+IHRD+K +N+ ++ +K+ D G+A D V T ++ APE+ +
Sbjct: 146 IIHRDLKPSNLAVNEDCELKILDGGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 199 ASDIWSVGCTVIELLT 214
DIWSVGC + ELLT
Sbjct: 203 TVDIWSVGCIMAELLT 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 57 AQEDLNIIMQEIDLLKNLN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGP 115
QE ++E+D+L+ ++ H NI++ + +T + ++ + ++ G L + +
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--T 120
Query: 116 FPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
E + +LE + LH+ ++HRD+K NIL + +KL DFG + +L +
Sbjct: 121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-K 179
Query: 176 THSVVGTPYWMAPEVIEMS------GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF 229
SV GTP ++APE+IE S G D+WS G + LL PP++ + M L
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 230 RIVQDER---PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
I+ P + S + D + + ++R A+ L+HP+ Q
Sbjct: 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 39 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI 157
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 158 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 214 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 30/220 (13%)
Query: 23 GDEIGKGAYGRVYKGLDLENGDF--VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
G ++G+G YG VYK + D A+KQ+ I+ +EI LL+ L H N++
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS----ACREIALLRELKHPNVI 81
Query: 81 ---KYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGP-------FPESLVAVYIAQVLE 130
K S R + ++ +Y E+ L +IIK ++ P +V + Q+L+
Sbjct: 82 SLQKVFLSHADRK-VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILD 139
Query: 131 GLVYLHEQGVIHRDIKGANILTTKE----GLVKLADFGVATKLTE-----ADVNTHSVVG 181
G+ YLH V+HRD+K ANIL E G VK+AD G A AD++ VV
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD--PVVV 197
Query: 182 TPYWMAPE-VIEMSGVCAASDIWSVGCTVIELLTCVPPYY 220
T ++ APE ++ A DIW++GC ELLT P ++
Sbjct: 198 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 26 IGKGAYGRVYKGLDLENGD---FVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKY 82
IG G +G V G G VAIK + ++ + + E ++ +H NI+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF-LSEASIMGQFDHPNIIHL 74
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
G + + II EY+ENGSL ++ N G F + + + G+ YL + +H
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKND-GRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY---WMAPEVIEMSGVCAA 199
RD+ NIL + K++DFG++ L + ++ G W APE I +A
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 193
Query: 200 SDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKD 258
SD+WS G + E+++ PY+++ + I + R P P + + C++K+
Sbjct: 194 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKE 253
Query: 259 ARQRP 263
RP
Sbjct: 254 RSDRP 258
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 6 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 65
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 66 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 124
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 125 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 180
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLT 214
+ + T VV T Y+ APEVI G D+WSVGC + E++
Sbjct: 181 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQV--SLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+GA+G V + ++N + + ++ E + + + +E D+L N + + I
Sbjct: 98 IGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKF-GPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ + +HL+++++Y G L ++ +KF PE + YI +++ + +H+ +H
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIE-----MSGV 196
RDIK N+L G ++LADFG K+ + V + VGTP +++PE+++ M
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 274
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-QDERPPIPESLS 244
D WS+G + E+L P+Y + +I+ +ER P ++
Sbjct: 275 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 323
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
+ + + +G G +G V + + + G+ VAIKQ E ++ ++ EI ++K LNH N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNV 74
Query: 80 VKY------LGSLKTRSHLHIILEYVENGSLANIIKPNKF---GPFPESLVAVYIAQVLE 130
V L L + +EY E G L + N+F E + ++ +
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISS 132
Query: 131 GLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWMA 187
L YLHE +IHRD+K NI+ + + K+ D G A +L + ++ T VGT ++A
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-FVGTLQYLA 191
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
PE++E D WS G E +T P+
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQV--SLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
IG+GA+G V + ++N + + ++ E + + + +E D+L N + + I
Sbjct: 82 IGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 84 GSLKTRSHLHIILEYVENGSLANIIKPNKF-GPFPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ + +HL+++++Y G L ++ +KF PE + YI +++ + +H+ +H
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLT-EADVNTHSVVGTPYWMAPEVIE-----MSGV 196
RDIK N+L G ++LADFG K+ + V + VGTP +++PE+++ M
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKY 258
Query: 197 CAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIV-QDERPPIPESLS 244
D WS+G + E+L P+Y + +I+ +ER P ++
Sbjct: 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 307
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 20 YMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNI 79
+ + + +G G +G V + + + G+ VAIKQ E ++ ++ EI ++K LNH N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNV 75
Query: 80 VKY------LGSLKTRSHLHIILEYVENGSLANIIKPNKF---GPFPESLVAVYIAQVLE 130
V L L + +EY E G L + N+F E + ++ +
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISS 133
Query: 131 GLVYLHEQGVIHRDIKGANILTT---KEGLVKLADFGVATKLTEADVNTHSVVGTPYWMA 187
L YLHE +IHRD+K NI+ + + K+ D G A +L + ++ T VGT ++A
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-FVGTLQYLA 192
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
PE++E D WS G E +T P+
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 39 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 98
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI 157
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 158 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 214 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQME----LDHERMSYLLYQM 128
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 187
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 3 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 62
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 63 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 121
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 122 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 177
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 178 AGTSFMMVPFVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 135
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 194
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 136
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 195
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 136
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 195
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYL-- 83
IG G++G V++ L D VAIK+V +D +E+ +++ + H N+V
Sbjct: 48 IGNGSFGVVFQA-KLVESDEVAIKKV------LQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 84 ----GSLKTRSHLHIILEYV-ENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQ 138
G K L+++LEYV E A+ P L+ +Y+ Q+L L Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 139 GVIHRDIKGANILT-TKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVI-EMSGV 196
G+ HRDIK N+L G++KL DFG A L + N S + + Y+ APE+I +
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV-SXICSRYYRAPELIFGATNY 219
Query: 197 CAASDIWSVGCTVIELLTCVP 217
DIWS GC + EL+ P
Sbjct: 220 TTNIDIWSTGCVMAELMQGQP 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 134
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 193
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 119/231 (51%), Gaps = 20/231 (8%)
Query: 1 MSRQTTTSAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQED 60
MS +A +S+ +++ + G+G +G V G + G VAIK+V + +
Sbjct: 6 MSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR 65
Query: 61 LNIIMQEIDLLKNLNHKNIVK---YLGSLKTRS----HLHIILEYVENG---SLANIIKP 110
IMQ++ +L +H NIV+ Y +L R +L++++EYV + N +
Sbjct: 66 ELQIMQDLAVL---HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYR- 121
Query: 111 NKFGPFPESLVAVYIAQVLE--GLVYLHEQGVIHRDIKGANILTTK-EGLVKLADFGVAT 167
+ P P L+ V++ Q++ G ++L V HRDIK N+L + +G +KL DFG A
Sbjct: 122 RQVAP-PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
Query: 168 KLTEADVNTHSVVGTPYWMAPEVI-EMSGVCAASDIWSVGCTVIELLTCVP 217
KL+ ++ N + + + Y+ APE+I A DIWSVGC E++ P
Sbjct: 181 KLSPSEPNV-AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLT 214
+ + VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMEPEVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 15/207 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL---- 74
+Y + IGKG +G+V K D + VA+K V E +EI +L++L
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ---AAEEIRILEHLRKQD 154
Query: 75 --NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
N N++ L + R+H+ + E + + +L +IK NKF F LV + +L+ L
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 133 VYLHEQGVIHRDIKGANILTTKEGL--VKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
LH+ +IH D+K NIL ++G +K+ DFG + + + + + ++ APEV
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVYXXIQSRFYRAPEV 270
Query: 191 IEMSGVCAASDIWSVGCTVIELLTCVP 217
I + D+WS+GC + ELLT P
Sbjct: 271 ILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 128
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 187
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSKTLDN------KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MS+ + F+ + D+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L +L+ +++++E ++ +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVGC + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 129
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 188
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L +L+ +++++E ++ +L +I+ ++ + Q+
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQME----LDHERMSYLLYQM 129
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 188
Query: 189 EVIEMSGVCAASDIWSVGCTVIELL 213
EVI G DIWSVGC + E++
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 40/241 (16%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQV--SLENIAQEDLNIIMQEI 68
H + ++Y + IG G+YG V + D VAIK++ E++ D I++EI
Sbjct: 46 HSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI--DCKRILREI 103
Query: 69 DLLKNLNHKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
+L LNH ++VK L ++ L+++LE + + + + + E +
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVY--LTELHIKT 160
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-------------- 169
+ +L G+ Y+H G++HRD+K AN L ++ VK+ DFG+A +
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 170 TEADVNTHSV-------------VGTPYWMAPEVIEM-SGVCAASDIWSVGCTVIELLTC 215
E D+N + V T ++ APE+I + A D+WS+GC ELL
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280
Query: 216 V 216
+
Sbjct: 281 I 281
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 133/304 (43%), Gaps = 31/304 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI-------- 63
K+ +D+ + +G G G+V + + + A+K + A+ ++ +
Sbjct: 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCP 115
Query: 64 -IMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVA 122
I++ +D+ +NL Y G R L I+ E ++ G L + I+ F E +
Sbjct: 116 HIVRIVDVYENL-------YAG----RKCLLIVXECLDGGELFSRIQDRGDQAFTEREAS 164
Query: 123 VYIAQVLEGLVYLHEQGVIHRDIKGANILTTKE---GLVKLADFGVATKLTEADVNTHSV 179
+ E + YLH + HRD+K N+L T + ++KL DFG A + T + T +
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT-TP 223
Query: 180 VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE---LQPMPAL---FRIVQ 233
TPY++APEV+ + D WS+G LL PP+Y L P R Q
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQ 283
Query: 234 DERP-PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMR 292
E P P +S ++ +R K + QR +HPWI + Q+ L S ++
Sbjct: 284 YEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLK 343
Query: 293 NVEE 296
+E
Sbjct: 344 EDKE 347
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 76
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HRD+ N + + VK+ DFG+ + E G
Sbjct: 136 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + + RP
Sbjct: 256 NCPERVTDLMRMCWQFNPKMRP 277
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 77
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 136
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HR++ N + + VK+ DFG+ + E D G
Sbjct: 137 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 256
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + RP
Sbjct: 257 NCPERVTDLMRMCWQFNPNMRP 278
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 12/206 (5%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL 74
T+ +Y IG GA G V D VAIK++S Q +E+ L+K +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 75 NHKNIVKYLG------SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
NHKNI+ L SL+ ++I++E + + +L +I+ ++ + Q+
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQME----LDHERMSYLLYQM 129
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A + + T VV T Y+ AP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAP 188
Query: 189 EVIEMSGVCAASDIWSVGCTVIELLT 214
EVI G D+WSVGC + E++
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 19/262 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKG--LDLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K L E+G+G++G VY+G D+ G+ VA+K V+ +E + + E ++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFL-NEASVMKG 76
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIK---------PNKFGPFPESLVAVY 124
++V+ LG + +++E + +G L + ++ P + P + ++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM- 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT-- 182
A++ +G+ YL+ + +HR++ N + + VK+ DFG+ + E D G
Sbjct: 136 AAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 183 PYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPE 241
WMAPE ++ +SD+WS G + E+ + PY L L ++ P+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 242 SLSPDITDFLRQCFKKDARQRP 263
+ +TD +R C++ + RP
Sbjct: 256 NCPERVTDLMRMCWQFNPNMRP 277
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 13/230 (5%)
Query: 57 AQEDLNIIMQEIDLLKNLN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGP 115
QE ++E+D+L+ ++ H NI++ + +T + ++ + ++ G L + +
Sbjct: 63 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--T 120
Query: 116 FPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
E + +LE + LH+ ++HRD+K NIL + +KL DFG + +L +
Sbjct: 121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-K 179
Query: 176 THSVVGTPYWMAPEVIEMS------GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF 229
V GTP ++APE+IE S G D+WS G + LL PP++ + M L
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 230 RIVQDER---PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
I+ P + S + D + + ++R A+ L+HP+ Q
Sbjct: 240 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIM 65
HK + N+ G +G GA+G+V Y + + VA+K + E +M
Sbjct: 16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALM 74
Query: 66 QEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV- 123
E+ +L L NH NIV LG+ +I EY G L N ++ + +S +
Sbjct: 75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-----DSFICSK 129
Query: 124 --------------------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADF 163
+ QV +G+ +L + IHRD+ NIL T + K+ DF
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 189
Query: 164 GVATKLTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
G+A + + D N + V G WMAPE I SD+WS G + EL +
Sbjct: 190 GLARDI-KNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
Query: 220 YELQPMPALFR--IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
Y P+ + F I + R PE ++ D ++ C+ D +RP K ++
Sbjct: 248 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEIDLLKNLNHKNIVKYLG 84
+G+G +G V+ G A K+++ + + + M E +L ++ + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 85 SLKTRSHLHIILEYVENGSL-ANIIKPNKFGP-FPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T++ L +++ + G + +I ++ P F E Y AQ++ GL +LH++ +I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K N+L +G V+++D G+A +L T GTP +MAPE++ + D
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 203 WSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
+++G T+ E++ P+ E L + V ++ P+ SP DF +KD
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDP 432
Query: 260 RQR 262
+R
Sbjct: 433 EKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEIDLLKNLNHKNIVKYLG 84
+G+G +G V+ G A K+++ + + + M E +L ++ + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 85 SLKTRSHLHIILEYVENGSL-ANIIKPNKFGP-FPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T++ L +++ + G + +I ++ P F E Y AQ++ GL +LH++ +I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K N+L +G V+++D G+A +L T GTP +MAPE++ + D
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 203 WSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
+++G T+ E++ P+ E L + V ++ P+ SP DF +KD
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDP 432
Query: 260 RQR 262
+R
Sbjct: 433 EKR 435
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEIDLLKNLNHKNIVKYLG 84
+G+G +G V+ G A K+++ + + + M E +L ++ + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 85 SLKTRSHLHIILEYVENGSL-ANIIKPNKFGP-FPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T++ L +++ + G + +I ++ P F E Y AQ++ GL +LH++ +I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K N+L +G V+++D G+A +L T GTP +MAPE++ + D
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 203 WSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
+++G T+ E++ P+ E L + V ++ P+ SP DF +KD
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDP 432
Query: 260 RQR 262
+R
Sbjct: 433 EKR 435
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIM 65
HK + N+ G +G GA+G+V Y + + VA+K + E +M
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALM 90
Query: 66 QEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV- 123
E+ +L L NH NIV LG+ +I EY G L N ++ + +S +
Sbjct: 91 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-----DSFICSK 145
Query: 124 --------------------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADF 163
+ QV +G+ +L + IHRD+ NIL T + K+ DF
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 205
Query: 164 GVATKLTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
G+A + + D N + V G WMAPE I SD+WS G + EL +
Sbjct: 206 GLARDI-KNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
Query: 220 YELQPMPALFR--IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
Y P+ + F I + R PE ++ D ++ C+ D +RP K ++
Sbjct: 264 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 57 AQEDLNIIMQEIDLLKNLN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGP 115
QE ++E+D+L+ ++ H NI++ + +T + ++ + ++ G L + +
Sbjct: 50 VQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--T 107
Query: 116 FPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN 175
E + +LE + LH+ ++HRD+K NIL + +KL DFG + +L +
Sbjct: 108 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE-K 166
Query: 176 THSVVGTPYWMAPEVIEMS------GVCAASDIWSVGCTVIELLTCVPPYYELQPMPALF 229
V GTP ++APE+IE S G D+WS G + LL PP++ + M L
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 226
Query: 230 RIVQDER---PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQ 275
I+ P + S + D + + ++R A+ L+HP+ Q
Sbjct: 227 MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK-------FGPF--PESLVAV 123
L H+NIV LG+ + +I EY G L N ++ + + P PE ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 124 -----YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
+ +QV +G+ +L + IHRD+ N+L T + K+ DFG+A + D N +
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSN-YI 223
Query: 179 VVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQ 233
V G WMAPE I SD+WS G + E+ + + PY + +++V+
Sbjct: 224 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
Query: 234 DERPPIPESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
D + +P +I ++ C+ + RP + + S
Sbjct: 284 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 321
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE-DLNIIMQEIDLLKNLNHKNIVKYLG 84
+G+G +G V+ G A K+++ + + + M E +L ++ + IV
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 85 SLKTRSHLHIILEYVENGSL-ANIIKPNKFGP-FPESLVAVYIAQVLEGLVYLHEQGVIH 142
+ +T++ L +++ + G + +I ++ P F E Y AQ++ GL +LH++ +I+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 143 RDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDI 202
RD+K N+L +G V+++D G+A +L T GTP +MAPE++ + D
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 203 WSVGCTVIELLTCVPPYY---ELQPMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDA 259
+++G T+ E++ P+ E L + V ++ P+ SP DF +KD
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDP 432
Query: 260 RQR 262
+R
Sbjct: 433 EKR 435
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 112/226 (49%), Gaps = 18/226 (7%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L +I
Sbjct: 61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLT 214
+ + VV T Y+ APEVI G D+WSVGC + E++
Sbjct: 176 AGTSFMMEPEVV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 106/198 (53%), Gaps = 14/198 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G +G+VYKG L +G VA+K++ E +L E++++ H+N+++ G
Sbjct: 46 LGRGGFGKVYKG-RLADGTLVAVKRLKEERXQGGELQF-QTEVEMISMAVHRNLLRLRGF 103
Query: 86 LKTRSHLHIILEYVENGSLANIIK--PNKFGP--FPE-SLVAVYIAQVLEGLVYLHEQ-- 138
T + ++ Y+ NGS+A+ ++ P P +P+ +A+ A+ GL YLH+
Sbjct: 104 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR---GLAYLHDHCD 160
Query: 139 -GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV-GTPYWMAPEVIEMSGV 196
+IHRD+K ANIL +E + DFG+A + D + V GT +APE +
Sbjct: 161 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKS 220
Query: 197 CAASDIWSVGCTVIELLT 214
+D++ G ++EL+T
Sbjct: 221 SEKTDVFGYGVMLLELIT 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 140/330 (42%), Gaps = 65/330 (19%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCT-------------------- 208
+ + T VV T Y+ APEVI G DIWSVG
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 209 --VIELLTCVPPYY--ELQPMPALFRIVQDERPPIP----ESLSPDIT------------ 248
VIE L P + +LQP R + RP E L PD+
Sbjct: 235 NKVIEQLGTPSPEFMKKLQPT---VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA 291
Query: 249 ----DFLRQCFKKDARQRPDAKTLLSHPWI 274
D L + DA +R L HP+I
Sbjct: 292 SQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 55/301 (18%)
Query: 10 FHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEID 69
F +T+ + L + +GKG YG V++G G+ VA+K S D +E +
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRGS--WQGENVAVKIFS-----SRDEKSWFRETE 81
Query: 70 LLKN--LNHKNIVKYLGSLKTRSH----LHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
L L H+NI+ ++ S T H L +I Y E GSL + ++ + +
Sbjct: 82 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141
Query: 124 YIAQVLEGLVYLH-----EQG---VIHRDIKGANILTTKEGLVKLADFGVATKLTEA--- 172
IA GL +LH QG + HRD+K NIL K G +AD G+A +++
Sbjct: 142 SIA---SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 173 -DVNTHSVVGTPYWMAPEVIE--MSGVCAAS----DIWSVGCTVIELLTCV--------- 216
DV + VGT +MAPEV++ + C S DIW+ G + E+ +
Sbjct: 199 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY 258
Query: 217 -PPYYELQPMPALFR------IVQDERPPIPESLSPD-----ITDFLRQCFKKDARQRPD 264
PP+Y++ P F V +RP IP D + +++C+ ++ R
Sbjct: 259 KPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT 318
Query: 265 A 265
A
Sbjct: 319 A 319
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 21/272 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFG--------PFPESLVAVY 124
L H+NIV LG+ + +I EY G L N ++ P + +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY 184
+QV +G+ +L + IHRD+ N+L T + K+ DFG+A + D N + V G
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSN-YIVKGNAR 215
Query: 185 ----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPI 239
WMAPE I SD+WS G + E+ + + PY + +++V+D
Sbjct: 216 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 275
Query: 240 PESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
+ +P +I ++ C+ + RP + + S
Sbjct: 276 QPAFAPKNIYSIMQACWALEPTHRPTFQQICS 307
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIM 65
HK + N+ G +G GA+G+V Y + + VA+K + E +M
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALM 97
Query: 66 QEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV- 123
E+ +L L NH NIV LG+ +I EY G L N ++ + +S +
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-----DSFICSK 152
Query: 124 --------------------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADF 163
+ QV +G+ +L + IHRD+ NIL T + K+ DF
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 212
Query: 164 GVATKLTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
G+A + + D N + V G WMAPE I SD+WS G + EL +
Sbjct: 213 GLARHI-KNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 220 YELQPMPALFR--IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
Y P+ + F I + R PE ++ D ++ C+ D +RP K ++
Sbjct: 271 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 113/225 (50%), Gaps = 18/225 (8%)
Query: 1 MSRQTTTSAFHKSK------TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLE 54
MSR + F+ + T+ +Y IG GA G V D VAIK++S
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60
Query: 55 NIAQEDLNIIMQEIDLLKNLNHKNIVKYLG------SLKTRSHLHIILEYVENGSLANII 108
Q +E+ L+K +NHKNI+ L SL+ ++I++E + + +L+ +I
Sbjct: 61 FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI 119
Query: 109 KPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
+ ++ + Q+L G+ +LH G+IHRD+K +NI+ + +K+ DFG+A
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Query: 169 LTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELL 213
+ + T VV T Y+ APEVI G DIWSVG + E++
Sbjct: 176 AGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIM 65
HK + N+ G +G GA+G+V Y + + VA+K + E +M
Sbjct: 34 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALM 92
Query: 66 QEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV- 123
E+ +L L NH NIV LG+ +I EY G L N ++ + +S +
Sbjct: 93 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-----DSFICSK 147
Query: 124 --------------------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADF 163
+ QV +G+ +L + IHRD+ NIL T + K+ DF
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 207
Query: 164 GVATKLTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
G+A + + D N + V G WMAPE I SD+WS G + EL +
Sbjct: 208 GLARDI-KNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
Query: 220 YELQPMPALFR--IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
Y P+ + F I + R PE ++ D ++ C+ D +RP K ++
Sbjct: 266 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 21/272 (7%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFG--------PFPESLVAVY 124
L H+NIV LG+ + +I EY G L N ++ P + +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPY 184
+QV +G+ +L + IHRD+ N+L T + K+ DFG+A + D N + V G
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSN-YIVKGNAR 223
Query: 185 ----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPI 239
WMAPE I SD+WS G + E+ + + PY + +++V+D
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMA 283
Query: 240 PESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
+ +P +I ++ C+ + RP + + S
Sbjct: 284 QPAFAPKNIYSIMQACWALEPTHRPTFQQICS 315
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 26/276 (9%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENI----AQEDLNIIMQEID 69
+ + +Y LG +GKG +G V+ G L + VAIK + + D E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 70 LLKNLN----HKNIVKYLGSLKTRSHLHIILEY-VENGSLANIIKPNKFGPFPESLVAVY 124
LL + H +++ L +T+ ++LE + L + I + GP E +
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI--TEKGPLGEGPSRCF 144
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QV+ + + H +GV+HRDIK NIL + G KL DFG L + D + V
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY 204
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIP 240
P W++ + +WS+G + +++ P+ Q I++ E P
Sbjct: 205 SPPEWISRHQYHA----LPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL-HFP 253
Query: 241 ESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+SPD +R+C RP + +L PW+Q
Sbjct: 254 AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK---FGPF------PESL--- 120
L H+NIV LG+ + +I EY G L N ++ GP PE L
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 121 ---------VAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTE 171
+ + +QV +G+ +L + IHRD+ N+L T + K+ DFG+A +
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 172 ADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMP 226
D N + V G WMAPE I SD+WS G + E+ + + PY +
Sbjct: 211 -DSN-YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 268
Query: 227 ALFRIVQDERPPIPESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
+++V+D + +P +I ++ C+ + RP + + S
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 313
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 11 HKSKTLDNKYMLGDEIGKGAYGRV-----YKGLDLENGDFVAIKQVSLENIAQEDLNIIM 65
HK + N+ G +G GA+G+V Y + + VA+K + E +M
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALM 97
Query: 66 QEIDLLKNL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV- 123
E+ +L L NH NIV LG+ +I EY G L N ++ + +S +
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR-----DSFICSK 152
Query: 124 --------------------YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADF 163
+ QV +G+ +L + IHRD+ NIL T + K+ DF
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 212
Query: 164 GVATKLTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY 219
G+A + + D N + V G WMAPE I SD+WS G + EL +
Sbjct: 213 GLARDI-KNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 220 YELQPMPALFR--IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLL 269
Y P+ + F I + R PE ++ D ++ C+ D +RP K ++
Sbjct: 271 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 48/288 (16%)
Query: 22 LGDEIGKGAYGRVYK---------GLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
G +G GA+G+V G+ ++ VA+K + E + +M E+ ++
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQ----VAVKMLK-EKADSSEREALMSELKMMT 103
Query: 73 NL-NHKNIVKYLGSLKTRSHLHIILEYVENGSLANII--KPNKFG--------------- 114
L +H+NIV LG+ +++I EY G L N + K KF
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 115 ------PFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATK 168
F + L Y QV +G+ +L + +HRD+ N+L T +VK+ DFG+A
Sbjct: 164 EDLNVLTFEDLLCFAY--QVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 169 LTEADVNTHSVVGTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQ 223
+ +D N + V G WMAPE + SD+WS G + E+ + V PY +
Sbjct: 222 IM-SDSN-YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
Query: 224 PMPALFRIVQDE-RPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLS 270
++++Q+ + P + +I ++ C+ D+R+RP L S
Sbjct: 280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 5/241 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII-MQEIDLLKNLNHKNIVKYLG 84
+GKG +G V G A K++ + I + + + E +L+ +N + +V
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T+ L ++L + G L I FPE+ Y A++ GL LH + +++RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K NIL G ++++D G+A + E VGT +MAPEV++ + D W+
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 205 VGCTVIELLTCVPPYYELQ---PMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+GC + E++ P+ + + + R+V++ E SP Q KD +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 262 R 262
R
Sbjct: 431 R 431
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV--------- 123
L H+NIV LG+ + +I EY G L N ++ + A+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 124 ---YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV 180
+ +QV +G+ +L + IHRD+ N+L T + K+ DFG+A + D N + V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSN-YIVK 223
Query: 181 GTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDE 235
G WMAPE I SD+WS G + E+ + + PY + +++V+D
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 236 RPPIPESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
+ +P +I ++ C+ + RP + + S
Sbjct: 284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 25/276 (9%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS---LENIAQED-LNIIMQEIDLLKN 73
N G +G GA+G+V + G A+ +V+ L++ A D +M E+ ++ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 74 LN-HKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV--------- 123
L H+NIV LG+ + +I EY G L N ++ + A+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 124 ---YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV 180
+ +QV +G+ +L + IHRD+ N+L T + K+ DFG+A + D N + V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN-DSN-YIVK 223
Query: 181 GTPY----WMAPEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDE 235
G WMAPE I SD+WS G + E+ + + PY + +++V+D
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 283
Query: 236 RPPIPESLSP-DITDFLRQCFKKDARQRPDAKTLLS 270
+ +P +I ++ C+ + RP + + S
Sbjct: 284 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 11 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 69
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 130 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 249
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 250 CPDMLLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 5/241 (2%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNII-MQEIDLLKNLNHKNIVKYLG 84
+GKG +G V G A K++ + I + + + E +L+ +N + +V
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 85 SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRD 144
+ +T+ L ++L + G L I FPE+ Y A++ GL LH + +++RD
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 145 IKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWS 204
+K NIL G ++++D G+A + E VGT +MAPEV++ + D W+
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
Query: 205 VGCTVIELLTCVPPYYELQ---PMPALFRIVQDERPPIPESLSPDITDFLRQCFKKDARQ 261
+GC + E++ P+ + + + R+V++ E SP Q KD +
Sbjct: 371 LGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 262 R 262
R
Sbjct: 431 R 431
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 55/297 (18%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
+T+ ++ L + +GKG YG V++G G+ VA+K S D +E +L
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGS--WQGENVAVKIFS-----SRDEKSWFRETELYNT 56
Query: 74 --LNHKNIVKYLGSLKTRSH----LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
L H+NI+ ++ S T H L +I Y E GSL + ++ + + IA
Sbjct: 57 VMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIA- 115
Query: 128 VLEGLVYLH-----EQG---VIHRDIKGANILTTKEGLVKLADFGVATKLTEA----DVN 175
GL +LH QG + HRD+K NIL K G +AD G+A +++ DV
Sbjct: 116 --SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 176 THSVVGTPYWMAPEVIE--MSGVCAAS----DIWSVGCTVIELLTCV----------PPY 219
+ VGT +MAPEV++ + C S DIW+ G + E+ + PP+
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
Query: 220 YELQPMPALFR------IVQDERPPIPESLSPD-----ITDFLRQCFKKDARQRPDA 265
Y++ P F V +RP IP D + +++C+ ++ R A
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHK 77
+Y IG+GAYG V D VAIK++S E+ Q ++EI +L H+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEH--QTYCQRTLREIQILLRFRHE 101
Query: 78 NIVKY-----LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
N++ +L+ ++I+ + +E L ++K + + ++ Q+L GL
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLS---NDHICYFLYQILRGL 157
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV---VGTPYWMAPE 189
Y+H V+HRD+K +N+L +K+ DFG+A +T + V T ++ APE
Sbjct: 158 KYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 190 VIEMS-GVCAASDIWSVGCTVIELLTCVP 217
++ S G + DIWSVGC + E+L+ P
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 78
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 90
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 146
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLAFRHENIIGIND 90
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 146
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 88
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 88
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 96
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 152
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 88
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 88
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E ++ K K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLME----TDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 93
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 149
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 94
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 150
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 85
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 141
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 86
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 142
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 108
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 164
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRP 246
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 86
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 142
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRP 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYXQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 88
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 144
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRP 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLAFRHENIIGIND 90
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 146
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRP 228
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 17 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 75
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 255
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 256 CPDMLFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 93
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 149
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRP 231
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 78
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 259 CPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 71
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 252 CPDMLFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 15/208 (7%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
+ D+K++ IG G +G+VYKG+ L +G VA+K+ + E + + + EI+ L
Sbjct: 38 TNNFDHKFL----IGHGVFGKVYKGV-LRDGAKVALKRRTPE--SSQGIEEFETEIETLS 90
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFP---ESLVAVYIAQVL 129
H ++V +G R+ + +I +Y+ENG+L + + E + + I
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA- 149
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWM 186
GL YLH + +IHRD+K NIL + + K+ DFG++ K TE D TH V GT ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELD-QTHLXXVVKGTLGYI 208
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLT 214
PE + SD++S G + E+L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 55/297 (18%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
+T+ L + +GKG YG V++G G+ VA+K S D +E +L
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGS--WQGENVAVKIFS-----SRDEKSWFRETELYNT 56
Query: 74 --LNHKNIVKYLGSLKTRSH----LHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
L H+NI+ ++ S T H L +I Y E GSL + ++ + + IA
Sbjct: 57 VMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIA- 115
Query: 128 VLEGLVYLH-----EQG---VIHRDIKGANILTTKEGLVKLADFGVATKLTEA----DVN 175
GL +LH QG + HRD+K NIL K G +AD G+A +++ DV
Sbjct: 116 --SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 176 THSVVGTPYWMAPEVIE--MSGVCAAS----DIWSVGCTVIELLTCV----------PPY 219
+ VGT +MAPEV++ + C S DIW+ G + E+ + PP+
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233
Query: 220 YELQPMPALFR------IVQDERPPIPESLSPD-----ITDFLRQCFKKDARQRPDA 265
Y++ P F V +RP IP D + +++C+ ++ R A
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 16 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 74
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 254
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 255 CPDMLFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 77
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY 184
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G P
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 77
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 258 CPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 48 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 106
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 287 CPDMLFELMRMCWQYNPKMRPSFLEIIS 314
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKY-- 82
IG+GAYG V D N VAI+++S E+ Q ++EI +L H+NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 92
Query: 83 ---LGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQG 139
+++ ++I+ + +E L ++K + ++ Q+L GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLS---NDHICYFLYQILRGLKYIHSAN 148
Query: 140 VIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS 194
V+HRD+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 195 -GVCAASDIWSVGCTVIELLTCVP 217
G + DIWSVGC + E+L+ P
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRP 230
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 84
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY 184
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G P
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
+G+G +G+VYKG L +G VA+K++ E +L E++++ H+N+++ G
Sbjct: 38 LGRGGFGKVYKG-RLADGXLVAVKRLKEERTQGGELQF-QTEVEMISMAVHRNLLRLRGF 95
Query: 86 LKTRSHLHIILEYVENGSLANIIK--PNKFGP--FPE-SLVAVYIAQVLEGLVYLHEQ-- 138
T + ++ Y+ NGS+A+ ++ P P +P+ +A+ A+ GL YLH+
Sbjct: 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSAR---GLAYLHDHCD 152
Query: 139 -GVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVV-GTPYWMAPEVIEMSGV 196
+IHRD+K ANIL +E + DFG+A + D + V G +APE +
Sbjct: 153 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKS 212
Query: 197 CAASDIWSVGCTVIELLT 214
+D++ G ++EL+T
Sbjct: 213 SEKTDVFGYGVMLLELIT 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 84
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG-TPY 184
++ +G+ YL+ +HRD+ N + ++ VK+ DFG+ + E D G P
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 185 -WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 265 CPDMLFELMRMCWQYNPKMRPSFLEIIS 292
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVS-LENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG 84
IG+GAYG V D N VAIK++S E+ Q ++EI +L H+NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLRFRHENIIGIND 108
Query: 85 SLKTRSHLHIILEYVENGSL-ANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHR 143
++ + + Y+ + A++ K K + ++ Q+L GL Y+H V+HR
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHR 168
Query: 144 DIKGANILTTKEGLVKLADFGVATKLTEADVNTHS-----VVGTPYWMAPEVIEMS-GVC 197
D+K +N+L +K+ DFG+A ++ + D + H+ V T ++ APE++ S G
Sbjct: 169 DLKPSNLLLNTTXDLKICDFGLA-RVADPD-HDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 198 AASDIWSVGCTVIELLTCVP 217
+ DIWSVGC + E+L+ P
Sbjct: 227 KSIDIWSVGCILAEMLSNRP 246
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 55/297 (18%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
+T+ + L + +GKG YG V++G L +G+ VA+K S D +E ++
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRG--LWHGESVAVKIFS-----SRDEQSWFRETEIYNT 56
Query: 74 --LNHKNIVKYLGSLKT----RSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
L H NI+ ++ S T + L +I Y E+GSL + ++ P +AV A
Sbjct: 57 VLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAAC 116
Query: 128 VLEGLVYLH-----EQG---VIHRDIKGANILTTKEGLVKLADFGVATKLTEA----DVN 175
GL +LH QG + HRD K N+L +AD G+A ++ D+
Sbjct: 117 ---GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG 173
Query: 176 THSVVGTPYWMAPEVI--EMSGVCAAS----DIWSVGCTVIELL--TCV--------PPY 219
+ VGT +MAPEV+ ++ C S DIW+ G + E+ T V PP+
Sbjct: 174 NNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPF 233
Query: 220 YELQPMPALFR------IVQDERPPIPESLSPD-----ITDFLRQCFKKDARQRPDA 265
Y++ P F V + P IP L+ D + +R+C+ + R A
Sbjct: 234 YDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE +E L + I + G E L +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI--TERGALQEELARSF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 180 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 228
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 229 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 18 NKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS----LENIAQED--LNIIMQEIDLL 71
KY +G GA+G V+ +D E V +K + LE+ ED L + EI +L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 72 KNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA-QVLE 130
+ H NI+K L + + +++E ++GS ++ P + +A YI Q++
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEV 190
+ YL + +IHRDIK NI+ ++ +KL DFG A L + ++ GT + APEV
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL-FYTFCGTIEYCAPEV 200
Query: 191 IEMSGVCAAS-DIWSVGCTVIELLTCVPPYYELQPMPALFRIVQDERPPIPESLSPDITD 249
+ + ++WS+G T+ L+ +E P L V+ P P +S ++
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLV------FEENPFCELEETVEAAIHP-PYLVSKELMS 253
Query: 250 FLRQCFKKDARQRPDAKTLLSHPWI 274
+ + +R + L++ PW+
Sbjct: 254 LVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 372 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 426
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 427 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 483
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 541
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 601
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 602 MYDLMNLCWTYDVENRP 618
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 371 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 425
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 426 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 482
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 540
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 600
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 601 MYDLMNLCWTYDVENRP 617
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 17/268 (6%)
Query: 19 KYMLGDEIGKGAYGRVYKGLDL-----ENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
K + E+G+G++G VY+G+ E VAIK V+ +E + + E ++K
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFL-NEASVMKE 71
Query: 74 LNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNK--------FGPFPESLVAVYI 125
N ++V+ LG + +I+E + G L + ++ + P S +
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 126 AQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGT--P 183
++ +G+ YL+ +HRD+ N ++ VK+ DFG+ + E D G
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 184 YWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVP-PYYELQPMPALFRIVQDERPPIPES 242
WM+PE ++ SD+WS G + E+ T PY L L +++ P++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
Query: 243 LSPDITDFLRQCFKKDARQRPDAKTLLS 270
+ + +R C++ + + RP ++S
Sbjct: 252 CPDMLLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 52/308 (16%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+ + + L +G+GAYG V G+ VAIK++ + L ++EI +LK+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFK 67
Query: 76 HKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
H+NI+ S + + ++II E ++ L +I + + +I Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLS---DDHIQYFIYQTLR 123
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH----------SVV 180
+ LH VIHRD+K +N+L +K+ DFG+A + E+ + V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 181 GTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPY----YELQPMPAL------- 228
T ++ APEV+ S A D+WS GC + EL P + Y Q +
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 229 ----FRIVQDER--------PPIPES--------LSPDITDFLRQCFKKDARQRPDAKTL 268
R ++ R P P + ++P D L++ D +R AK
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 269 LSHPWIQN 276
L HP++Q
Sbjct: 304 LEHPYLQT 311
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 209 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 257
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 258 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 134
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 195 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 243
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 244 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 209 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 257
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 258 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 208 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 256
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 257 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL-NHKNIVKY 82
++IG G +G V+K + +G AIK+ D ++E+ L H ++V+Y
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNK--FGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ H+ I EY GSLA+ I N F E+ + + QV GL Y+H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 141 IHRDIKGANILTTK---------EG----------LVKLADFGVATKLTEADVNTHSVVG 181
+H DIK +NI ++ EG + K+ D G T+++ V G
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE----G 190
Query: 182 TPYWMAPEVIEMSGV-CAASDIWSVGCTVIELLTCVPPYYELQPMP----ALFRIVQDER 236
++A EV++ + +DI+++ TV+ C +P+P I Q
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTVV----CAAG---AEPLPRNGDQWHEIRQGRL 243
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P IP+ LS + T+ L+ D +RP A L+ H
Sbjct: 244 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNL-NHKNIVKY 82
++IG G +G V+K + +G AIK+ D ++E+ L H ++V+Y
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNK--FGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ H+ I EY GSLA+ I N F E+ + + QV GL Y+H +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 141 IHRDIKGANILTTK---------EG----------LVKLADFGVATKLTEADVNTHSVVG 181
+H DIK +NI ++ EG + K+ D G T+++ V G
Sbjct: 133 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE----G 188
Query: 182 TPYWMAPEVIEMSGV-CAASDIWSVGCTVIELLTCVPPYYELQPMP----ALFRIVQDER 236
++A EV++ + +DI+++ TV+ +P+P I Q
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTVVXAAGA-------EPLPRNGDQWHEIRQGRL 241
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P IP+ LS + T+ L+ D +RP A L+ H
Sbjct: 242 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 162
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 222
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 223 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 271
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 272 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 208 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 256
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 257 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 52/308 (16%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+ + + L +G+GAYG V G+ VAIK++ + L ++EI +LK+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFK 67
Query: 76 HKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
H+NI+ S + + ++II E ++ L +I + + +I Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLS---DDHIQYFIYQTLR 123
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH----------SVV 180
+ LH VIHRD+K +N+L +K+ DFG+A + E+ + V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 181 GTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPY----YELQPMPAL------- 228
T ++ APEV+ S A D+WS GC + EL P + Y Q +
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 229 ----FRIVQDER--------PPIPES--------LSPDITDFLRQCFKKDARQRPDAKTL 268
R ++ R P P + ++P D L++ D +R AK
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 269 LSHPWIQN 276
L HP++Q
Sbjct: 304 LEHPYLQT 311
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 52/308 (16%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN 75
+ + + L +G+GAYG V G+ VAIK++ + L ++EI +LK+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFK 67
Query: 76 HKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLE 130
H+NI+ S + + ++II E ++ L +I + + +I Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLS---DDHIQYFIYQTLR 123
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH----------SVV 180
+ LH VIHRD+K +N+L +K+ DFG+A + E+ + V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 181 GTPYWMAPEVIEMSG-VCAASDIWSVGCTVIELLTCVPPY----YELQPMPAL------- 228
T ++ APEV+ S A D+WS GC + EL P + Y Q +
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 229 ----FRIVQDER--------PPIPES--------LSPDITDFLRQCFKKDARQRPDAKTL 268
R ++ R P P + ++P D L++ D +R AK
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 269 LSHPWIQN 276
L HP++Q
Sbjct: 304 LEHPYLQT 311
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN-HKNIVKY 82
++IG G +G V+K + +G AIK+ D ++E+ L H ++V+Y
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNK--FGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ H+ I EY GSLA+ I N F E+ + + QV GL Y+H +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 141 IHRDIKGANILTTK---------EG----------LVKLADFGVATKLTEADVNTHSVVG 181
+H DIK +NI ++ EG + K+ D G T+++ V G
Sbjct: 137 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE----G 192
Query: 182 TPYWMAPEVIEMSGV-CAASDIWSVGCTVIELLTCVPPYYELQPMP----ALFRIVQDER 236
++A EV++ + +DI+++ TV+ C +P+P I Q
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTVV----CAAG---AEPLPRNGDQWHEIRQGRL 245
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P IP+ LS + T+ L+ D +RP A L+ H
Sbjct: 246 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 196 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 244
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 245 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 134
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 195 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 243
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 244 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 208 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 256
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 257 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 109
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 110 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 167
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 227
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 228 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 276
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 277 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 209 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 257
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 258 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLN-HKNIVKY 82
++IG G +G V+K + +G AIK+ D ++E+ L H ++V+Y
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 83 LGSLKTRSHLHIILEYVENGSLANIIKPNK--FGPFPESLVAVYIAQVLEGLVYLHEQGV 140
+ H+ I EY GSLA+ I N F E+ + + QV GL Y+H +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 141 IHRDIKGANILTTK---------EG----------LVKLADFGVATKLTEADVNTHSVVG 181
+H DIK +NI ++ EG + K+ D G T+++ V G
Sbjct: 135 VHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE----G 190
Query: 182 TPYWMAPEVIEMSGV-CAASDIWSVGCTVIELLTCVPPYYELQPMP----ALFRIVQDER 236
++A EV++ + +DI+++ TV+ C +P+P I Q
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTVV----CAAG---AEPLPRNGDQWHEIRQGRL 243
Query: 237 PPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSH 271
P IP+ LS + T+ L+ D +RP A L+ H
Sbjct: 244 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 196 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 244
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 245 ---QRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 40/319 (12%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 181 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 229
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRALQSSLRHSGTMRNVEEN 297
+ +S + +R C RP + + +HPW+Q+ +++ H ++
Sbjct: 230 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSL------ 280
Query: 298 GSADAEIPSEDNQSAGESL 316
+ PS+ S+GE+L
Sbjct: 281 ----SPGPSKSGPSSGENL 295
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 135
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 196 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 244
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 245 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 181 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 229
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 230 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 148
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 208
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 209 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 257
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 258 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 162
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 222
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 223 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 271
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 272 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 154
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 214
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 215 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 263
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 264 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 37/236 (15%)
Query: 9 AFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEI 68
++ K L+N +++ ++G G +GRV ++N + A+K V NI + + + E
Sbjct: 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV--RNIKKYTRSAKI-EA 82
Query: 69 DLLKNLNHKNI-----VKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAV 123
D+LK + + +I VKY G H+ +I E + SL II N + F + +
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKL 141
Query: 124 YIAQVLEGLVYLHEQGVIHRDIKGANILT-------------------------TKEGLV 158
Y ++L+ L YL + + H D+K NIL TK +
Sbjct: 142 YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI 201
Query: 159 KLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLT 214
KL DFG AT ++D + S++ T + APEVI G +SD+WS GC + EL T
Sbjct: 202 KLIDFGCAT--FKSDYHG-SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 147
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 208 SPPEWI--RYHRYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR------- 256
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 257 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 40/239 (16%)
Query: 9 AFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVS--LENIAQEDLNIIMQ 66
A K+ + + Y + IG+G+YG VY D VAIK+V+ E++ D I++
Sbjct: 19 AIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI--DCKRILR 76
Query: 67 EIDLLKNLNHKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLV 121
EI +L L I++ L L+I+LE + + L + K F E V
Sbjct: 77 EITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIF--LTEQHV 133
Query: 122 AVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV-- 179
+ +L G ++HE G+IHRD+K AN L ++ VK+ DFG+A + +D + H V
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKDIHIVND 192
Query: 180 ------------------------VGTPYWMAPEVIEM-SGVCAASDIWSVGCTVIELL 213
V T ++ APE+I + + DIWS GC ELL
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 120
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 180
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 181 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 229
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 230 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 119
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 179
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 180 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 228
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 229 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI---------IMQ 66
+ + Y + I G+YG V G+D E G VAIK+V +NI +++
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPE 118
EI LL + +H NI LG H L+++ E + LA +I + P+
Sbjct: 79 EIRLLNHFHHPNI---LGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
+ ++ +L GL LHE GV+HRD+ NIL + + DF +A + T AD N
Sbjct: 135 H-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT-ADANKTH 192
Query: 179 VVGTPYWMAPE-VIEMSGVCAASDIWSVGCTVIELL 213
V ++ APE V++ G D+WS GC + E+
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNI---------IMQ 66
+ + Y + I G+YG V G+D E G VAIK+V +NI +++
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR 78
Query: 67 EIDLLKNLNHKNIVKYLGSLKTRSH--------LHIILEYVENGSLANIIKPNKFGPFPE 118
EI LL + +H NI LG H L+++ E + LA +I + P+
Sbjct: 79 EIRLLNHFHHPNI---LGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQ 134
Query: 119 SLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHS 178
+ ++ +L GL LHE GV+HRD+ NIL + + DF +A + T AD N
Sbjct: 135 H-IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDT-ADANKTH 192
Query: 179 VVGTPYWMAPE-VIEMSGVCAASDIWSVGCTVIELL 213
V ++ APE V++ G D+WS GC + E+
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGS 85
IG G +G+V+K +G IK+V N E +E+ L L+H NIV Y G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE------REVKALAKLDHVNIVHYNGC 72
Query: 86 L-----------------KTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQV 128
KT+ L I +E+ + G+L I+ + + L Q+
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKC-LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 129 LEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAP 188
+G+ Y+H + +I+RD+K +NI VK+ DFG+ T L + D GT +M+P
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL-KNDGKRXRSKGTLRYMSP 190
Query: 189 EVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE 221
E I D++++G + ELL +E
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELLHVCDTAFE 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I G E L +
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSF 118
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 178
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 179 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 227
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 228 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQEIDLL 71
L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 72 KNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVYIAQV 128
K ++ +++ L + +ILE E L + I G E L + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV 119
Query: 129 LEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVVGTPY 184
LE + + H GV+HRDIK NIL G +KL DFG L + D + V P
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERPPIPE 241
W+ G AA +WS+G + +++ P+ E+ FR +
Sbjct: 180 WIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR----------Q 225
Query: 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+S + +R C RP + + +HPW+Q+
Sbjct: 226 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 30/279 (10%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQE 67
+ + L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 68 IDLLKNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVY 124
+ LLK ++ +++ L + +ILE E L + I + G E L +
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSF 142
Query: 125 IAQVLEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVV 180
QVLE + + H GV+HRDIK NIL G +KL DFG L + D + V
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 202
Query: 181 GTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERP 237
P W+ G AA +WS+G + +++ P+ E+ FR
Sbjct: 203 SPPEWIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR------- 251
Query: 238 PIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+ +S + +R C RP + + +HPW+Q+
Sbjct: 252 ---QRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 98/225 (43%), Gaps = 36/225 (16%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLG- 84
IG G +G+V+K +G I++V N E +E+ L L+H NIV Y G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE------REVKALAKLDHVNIVHYNGC 73
Query: 85 -------------SLKTRSH---------------LHIILEYVENGSLANIIKPNKFGPF 116
SL++ + L I +E+ + G+L I+ +
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 117 PESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNT 176
+ L Q+ +G+ Y+H + +IHRD+K +NI VK+ DFG+ T L T
Sbjct: 134 DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT 193
Query: 177 HSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYE 221
S GT +M+PE I D++++G + ELL +E
Sbjct: 194 RS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE 237
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 13 SKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLK 72
+ D+K++ IG G +G+VYKG+ L +G VA+K+ + E + + + EI+ L
Sbjct: 38 TNNFDHKFL----IGHGVFGKVYKGV-LRDGAKVALKRRTPE--SSQGIEEFETEIETLS 90
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFP---ESLVAVYIAQVL 129
H ++V +G R+ + +I +Y+ENG+L + + E + + I
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA- 149
Query: 130 EGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTH---SVVGTPYWM 186
GL YLH + +IHRD+K NIL + + K+ DFG++ K TE TH V GT ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELG-QTHLXXVVKGTLGYI 208
Query: 187 APEVIEMSGVCAASDIWSVGCTVIELLT 214
PE + SD++S G + E+L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLC 236
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQEIDLL 71
L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 72 KNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVYIAQV 128
K ++ +++ L + +ILE E L + I G E L + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV 119
Query: 129 LEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVVGTPY 184
LE + + H GV+HRDIK NIL G +KL DFG L + D + V P
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERPPIPE 241
W+ G AA +WS+G + +++ P+ E+ FR +
Sbjct: 180 WIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR----------Q 225
Query: 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+S + +R C RP + + +HPW+Q+
Sbjct: 226 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 16 LDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQE----DLNIIMQEIDLL 71
L+++Y +G +G G +G VY G+ + + VAIK V + I+ + + E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 72 KNLN--HKNIVKYLGSLKTRSHLHIILEYVEN-GSLANIIKPNKFGPFPESLVAVYIAQV 128
K ++ +++ L + +ILE E L + I G E L + QV
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV 119
Query: 129 LEGLVYLHEQGVIHRDIKGANILT-TKEGLVKLADFGVATKLTE---ADVNTHSVVGTPY 184
LE + + H GV+HRDIK NIL G +KL DFG L + D + V P
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPE 179
Query: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPY---YELQPMPALFRIVQDERPPIPE 241
W+ G AA +WS+G + +++ P+ E+ FR +
Sbjct: 180 WIRYH--RYHGRSAA--VWSLGILLYDMVCGDIPFEHDEEIIGGQVFFR----------Q 225
Query: 242 SLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQN 276
+S + +R C RP + + +HPW+Q+
Sbjct: 226 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 7 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 61
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 62 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 118
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 176
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 236
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 237 MYDLMNLCWTYDVENRP 253
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 27 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 81
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 82 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 138
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 196
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 256
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 257 MYDLMNLCWTYDVENRP 273
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 19 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 73
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 74 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 130
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 188
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 248
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 249 MYDLMNLCWTYDVENRP 265
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 31/230 (13%)
Query: 12 KSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLL 71
K+ + + Y++ IG+G+YG VY D VAIK+V+ D I++EI +L
Sbjct: 20 KNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITIL 79
Query: 72 KNLNHKNIVKYLG-----SLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIA 126
L I++ L L+I+LE + + L + K F E + +
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIF--LTEEHIKTILY 136
Query: 127 QVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKL-TEADVNT--------- 176
+L G ++HE G+IHRD+K AN L ++ VK+ DFG+A + +E D N
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 177 ------------HSVVGTPYWMAPEVIEMSGVCAAS-DIWSVGCTVIELL 213
S V T ++ APE+I + S DIWS GC ELL
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 29 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 140
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 198
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 258
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 259 MYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 29 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 140
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 198
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 258
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 259 MYDLMNLCWTYDVENRP 275
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 9 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 64 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 120
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 178
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 238
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 239 MYDLMNLCWTYDVENRP 255
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 18/257 (7%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 13 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 124
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVN-----THSVVGTPYWMA 187
YL E +HRD+ N+L + K++DFG++ L AD N TH W A
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENYYKAQTHGKWPVK-WYA 182
Query: 188 PEVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPD 246
PE I + SD+WS G + E + PY ++ + + ER P +
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPRE 242
Query: 247 ITDFLRQCFKKDARQRP 263
+ D + C+ D RP
Sbjct: 243 MYDLMNLCWTYDVENRP 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 80.5 bits (197), Expect = 7e-15, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 115/256 (44%), Gaps = 16/256 (6%)
Query: 15 TLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDL--NIIMQEIDLLK 72
TL++K E+G G +G V KG + L+N A + + ++ E ++++
Sbjct: 13 TLEDK-----ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 73 NLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGL 132
L++ IV+ +G + S + +++E E G L ++ N+ + + + QV G+
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRH--VKDKNIIELVHQVSMGM 124
Query: 133 VYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVG----TPYWMAP 188
YL E +HRD+ N+L + K++DFG++ L AD N + W AP
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL-RADENXYKAQTHGKWPVKWYAP 183
Query: 189 EVIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDI 247
E I + SD+WS G + E + PY ++ + + ER P ++
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREM 243
Query: 248 TDFLRQCFKKDARQRP 263
D + C+ D RP
Sbjct: 244 YDLMNLCWTYDVENRP 259
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 80.5 bits (197), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ LNH+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKLNHQNIV 97
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 98 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILER--IEYC 303
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ NH+NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIV 123
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 124 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 183 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 243 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 302
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 303 RIMTQCWQHQPEDRPNFAIILER--IEYC 329
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ LNH+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKLNHQNIV 111
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 112 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 291 RIMTQCWQHQPEDRPNFAIILER--IEYC 317
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 51/261 (19%)
Query: 26 IGKGAYGRVYKGLDLENGDFVAIKQVSLEN--IAQEDLNIIMQEIDLLKNLNHKNIVKYL 83
+G+G +G V++ + + AIK++ L N +A+E +M+E+ L L H IV+Y
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK---VMREVKALAKLEHPGIVRYF 69
Query: 84 GSLKTRS------------HLHIILEYVENGSLANIIKPNKFGPFPESLVAVYI-AQVLE 130
+ ++ +L+I ++ +L + + E V ++I Q+ E
Sbjct: 70 NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129
Query: 131 GLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSV----------- 179
+ +LH +G++HRD+K +NI T + +VK+ DFG+ T + + D +V
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEEQTVLTPMPAYARHT 188
Query: 180 --VGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTC------------------VPPY 219
VGT +M+PE I + DI+S+G + ELL PP
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPL 248
Query: 220 YELQPMPALFRIVQDERPPIP 240
+ Q P + +VQD P P
Sbjct: 249 FT-QKYPCEYVMVQDMLSPSP 268
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ NH+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIV 97
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 98 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILER--IEYC 303
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ NH+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIV 97
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 98 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILER--IEYC 303
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ NH+NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIV 103
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 104 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 163 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 223 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 282
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 283 RIMTQCWQHQPEDRPNFAIILER--IEYC 309
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 26 IGKGAYGRVYKGL--DLENGDF---VAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIV 80
+G GA+G VY+G + N VA+K + Q++L+ +M+ + ++ NH+NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL-IISKFNHQNIV 114
Query: 81 KYLG-SLKTRSHLHIILEYVENGSLANIIKPNKFGPF-PESLVAVYIAQVLE----GLVY 134
+ +G SL++ I+LE + G L + ++ + P P SL + + V G Y
Sbjct: 115 RCIGVSLQSLPRF-ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 135 LHEQGVIHRDIKGANILTTKEG---LVKLADFGVATKLTEADVNTHSVVGT-PY-WMAPE 189
L E IHRDI N L T G + K+ DFG+A + A P WM PE
Sbjct: 174 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 190 VIEMSGVCAASDIWSVGCTVIELLTC-VPPYYELQPMPALFRIVQDERPPIPESLSPDIT 248
+ +D WS G + E+ + PY L + R P++ +
Sbjct: 234 AFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY 293
Query: 249 DFLRQCFKKDARQRPDAKTLLSHPWIQNC 277
+ QC++ RP+ +L I+ C
Sbjct: 294 RIMTQCWQHQPEDRPNFAIILER--IEYC 320
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 144/324 (44%), Gaps = 64/324 (19%)
Query: 14 KTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKN 73
+T+ + + +IGKG YG V+ G G+ VA+K A +E ++ +
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGK--WRGEKVAVKVFFTTEEAS-----WFRETEIYQT 85
Query: 74 --LNHKNIVKYLGS----LKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQ 127
+ H+NI+ ++ + + + L++I +Y ENGSL + +K +S++ + +
Sbjct: 86 VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDA--KSMLKLAYSS 143
Query: 128 VLEGLVYLHEQ--------GVIHRDIKGANILTTKEGLVKLADFGVATKL----TEADVN 175
V GL +LH + + HRD+K NIL K G +AD G+A K E D+
Sbjct: 144 V-SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 176 THSVVGTPYWMAPEVIEMS------GVCAASDIWSVGCTVIELL-TCVP---------PY 219
++ VGT +M PEV++ S +D++S G + E+ CV PY
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 220 YELQPMPALFR------IVQDERPPIPESLSPDITDFLRQCFKKDARQRPDAKTLLSHPW 273
++L P + ++ RP P S D + LRQ K L++ W
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD--ECLRQMGK-----------LMTECW 309
Query: 274 IQNCRRALQSSLRHSGTMRNVEEN 297
N L ++LR T+ + E+
Sbjct: 310 AHNPASRL-TALRVKKTLAKMSES 332
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,641,583
Number of Sequences: 62578
Number of extensions: 1594906
Number of successful extensions: 8085
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3888
Number of HSP's gapped (non-prelim): 1300
length of query: 1437
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1326
effective length of database: 8,027,179
effective search space: 10644039354
effective search space used: 10644039354
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)