Query 000540
Match_columns 1433
No_of_seqs 868 out of 5829
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 18:36:18 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000540.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000540hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 5E-248 1E-252 2287.4 94.0 1323 36-1427 12-1370(1391)
2 PLN03140 ABC transporter G fam 100.0 7E-228 2E-232 2264.4 135.9 1404 19-1425 19-1451(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 3E-182 5E-187 1834.4 129.5 1259 94-1408 3-1328(1394)
4 PLN03211 ABC transporter G-25; 100.0 4.3E-90 9.3E-95 873.9 59.2 566 843-1427 36-645 (659)
5 KOG0061 Transporter, ABC super 100.0 3.9E-90 8.5E-95 865.0 51.3 556 843-1423 22-592 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.2E-88 2.7E-93 862.7 54.7 546 870-1426 36-599 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 7.4E-86 1.6E-90 893.8 58.4 539 870-1419 72-674 (1394)
8 PLN03140 ABC transporter G fam 100.0 8.3E-85 1.8E-89 878.4 53.3 569 842-1419 127-769 (1470)
9 KOG0061 Transporter, ABC super 100.0 1.4E-79 3.1E-84 769.7 57.1 582 115-775 22-608 (613)
10 TIGR00955 3a01204 The Eye Pigm 100.0 4.1E-79 8.9E-84 775.6 58.7 569 162-774 35-612 (617)
11 PLN03211 ABC transporter G-25; 100.0 2.3E-78 4.9E-83 767.0 63.7 609 114-775 35-658 (659)
12 KOG0065 Pleiotropic drug resis 100.0 1E-77 2.2E-82 754.1 33.8 515 870-1394 126-659 (1391)
13 KOG0055 Multidrug/pheromone ex 100.0 1.7E-75 3.8E-80 737.1 44.4 835 80-1084 320-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 1.1E-73 2.4E-78 738.7 51.1 773 165-1084 534-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 2.9E-69 6.4E-74 725.7 69.7 224 846-1096 1937-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 5.4E-68 1.2E-72 726.3 55.9 211 845-1084 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 1.3E-67 2.8E-72 723.5 53.0 211 845-1084 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 1.4E-65 3.1E-70 610.1 50.5 474 165-1084 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 3.1E-65 6.7E-70 692.8 59.7 217 845-1084 1164-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 3.2E-65 7E-70 700.8 55.0 211 845-1084 1283-1503(1522)
21 PTZ00243 ABC transporter; Prov 100.0 2.1E-63 4.4E-68 680.6 57.9 211 845-1084 1307-1528(1560)
22 TIGR01271 CFTR_protein cystic 100.0 6.2E-63 1.3E-67 676.1 58.5 210 845-1084 1216-1435(1490)
23 PRK10261 glutathione transport 100.0 6.6E-63 1.4E-67 628.0 53.7 488 165-1085 29-549 (623)
24 PRK13549 xylose transporter AT 100.0 3.7E-63 8E-68 619.1 48.6 459 165-1085 18-490 (506)
25 PRK09700 D-allose transporter 100.0 4.2E-63 9.1E-68 619.6 46.7 458 165-1084 18-493 (510)
26 PRK10762 D-ribose transporter 100.0 7.8E-63 1.7E-67 615.5 48.0 449 165-1085 17-480 (501)
27 PRK15134 microcin C ABC transp 100.0 2.1E-62 4.5E-67 615.5 51.4 463 165-1084 22-510 (529)
28 PRK15439 autoinducer 2 ABC tra 100.0 3.3E-62 7.1E-67 610.1 48.4 453 165-1085 24-488 (510)
29 TIGR03269 met_CoM_red_A2 methy 100.0 6.4E-62 1.4E-66 610.4 50.7 445 165-1084 13-512 (520)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1E-61 2.2E-66 606.2 47.5 460 165-1084 14-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 1.2E-61 2.5E-66 604.8 47.3 451 165-1086 17-482 (501)
32 PRK10982 galactose/methyl gala 100.0 1.3E-60 2.9E-65 594.3 47.6 449 165-1084 11-475 (491)
33 PRK10938 putative molybdenum t 100.0 1.3E-59 2.9E-64 585.7 42.8 446 166-1081 17-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.5E-58 3.3E-63 514.6 45.7 470 163-1084 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 3.6E-57 7.8E-62 570.0 54.8 201 846-1083 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 2.7E-57 5.8E-62 569.5 48.5 199 846-1084 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-56 2.4E-61 565.7 53.2 201 846-1083 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.9E-54 6.2E-59 549.1 54.4 197 846-1084 312-512 (638)
39 PRK11147 ABC transporter ATPas 100.0 3.7E-54 7.9E-59 549.7 49.8 202 846-1084 319-523 (635)
40 PRK13409 putative ATPase RIL; 100.0 8E-55 1.7E-59 545.8 41.6 211 846-1098 340-554 (590)
41 COG1129 MglA ABC-type sugar tr 100.0 2.6E-53 5.6E-58 502.5 43.6 447 164-1080 20-481 (500)
42 PLN03073 ABC transporter F fam 100.0 2.6E-52 5.6E-57 531.5 43.0 200 846-1084 508-709 (718)
43 COG0488 Uup ATPase components 100.0 1.5E-51 3.3E-56 501.9 44.0 221 164-414 15-240 (530)
44 COG3845 ABC-type uncharacteriz 100.0 2.1E-49 4.5E-54 457.8 39.8 457 164-1085 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 7.1E-44 1.5E-48 372.0 22.0 214 847-1084 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 4.8E-44 1E-48 373.3 20.3 221 164-436 14-239 (240)
47 KOG0927 Predicted transporter 100.0 7.6E-42 1.6E-46 395.2 30.2 202 845-1084 388-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 5.4E-42 1.2E-46 375.3 21.2 225 163-438 17-247 (339)
49 COG1135 AbcC ABC-type metal io 100.0 1.1E-41 2.5E-46 372.8 20.8 219 847-1085 2-227 (339)
50 COG1131 CcmA ABC-type multidru 100.0 4.2E-41 9.1E-46 388.3 24.9 211 871-1097 17-230 (293)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.2E-41 9.1E-46 368.9 23.5 218 846-1086 4-224 (254)
52 COG3839 MalK ABC-type sugar tr 100.0 1.8E-41 3.9E-46 387.8 21.4 217 167-434 18-235 (338)
53 COG1125 OpuBA ABC-type proline 100.0 3E-41 6.4E-46 358.2 19.9 210 164-414 13-225 (309)
54 COG1127 Ttg2A ABC-type transpo 100.0 5.8E-41 1.2E-45 355.6 22.1 231 846-1100 8-250 (263)
55 COG1116 TauB ABC-type nitrate/ 100.0 6.3E-41 1.4E-45 361.8 21.7 204 846-1075 3-207 (248)
56 COG3842 PotA ABC-type spermidi 100.0 4.9E-41 1.1E-45 386.2 20.9 223 164-436 17-240 (352)
57 COG1120 FepC ABC-type cobalami 100.0 8.5E-41 1.8E-45 368.7 21.3 218 846-1085 2-224 (258)
58 COG1136 SalX ABC-type antimicr 100.0 2.5E-40 5.4E-45 358.1 23.9 193 872-1076 18-219 (226)
59 COG1125 OpuBA ABC-type proline 100.0 1.3E-40 2.8E-45 353.4 18.5 213 847-1084 2-220 (309)
60 COG1118 CysA ABC-type sulfate/ 100.0 1.7E-40 3.6E-45 362.4 19.9 224 164-436 14-241 (345)
61 COG3638 ABC-type phosphate/pho 100.0 1.6E-40 3.5E-45 351.3 18.6 219 846-1085 3-233 (258)
62 COG1120 FepC ABC-type cobalami 100.0 4.3E-40 9.2E-45 363.1 20.0 210 164-413 14-227 (258)
63 COG4555 NatA ABC-type Na+ tran 100.0 2.3E-40 4.9E-45 340.1 15.7 202 872-1085 15-218 (245)
64 COG1116 TauB ABC-type nitrate/ 100.0 7.7E-40 1.7E-44 353.4 20.6 194 165-403 16-211 (248)
65 TIGR01257 rim_protein retinal- 100.0 6.3E-35 1.4E-39 394.8 71.4 216 845-1084 927-1144(2272)
66 COG2884 FtsE Predicted ATPase 100.0 1.2E-39 2.7E-44 332.3 18.9 212 847-1082 2-219 (223)
67 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-39 2.7E-44 355.6 19.4 206 870-1085 13-223 (345)
68 COG1117 PstB ABC-type phosphat 100.0 1.4E-39 3E-44 337.7 18.7 217 846-1084 7-232 (253)
69 COG1131 CcmA ABC-type multidru 100.0 4E-39 8.6E-44 371.9 24.4 212 164-418 17-230 (293)
70 COG1127 Ttg2A ABC-type transpo 100.0 2.4E-39 5.1E-44 343.3 20.4 211 163-414 19-235 (263)
71 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.8E-39 1.3E-43 352.1 22.8 208 166-414 18-227 (254)
72 COG1136 SalX ABC-type antimicr 100.0 7E-39 1.5E-43 346.8 22.8 197 164-403 17-220 (226)
73 KOG0058 Peptide exporter, ABC 100.0 1.9E-39 4.2E-44 390.7 20.4 214 158-414 475-691 (716)
74 COG4555 NatA ABC-type Na+ tran 100.0 2E-39 4.2E-44 333.2 16.8 209 162-414 12-222 (245)
75 COG3839 MalK ABC-type sugar tr 100.0 5.2E-39 1.1E-43 367.7 22.2 214 846-1084 3-218 (338)
76 COG1117 PstB ABC-type phosphat 100.0 3.3E-39 7.1E-44 334.9 17.8 222 164-433 19-248 (253)
77 COG3842 PotA ABC-type spermidi 100.0 7.3E-39 1.6E-43 368.3 20.5 215 846-1084 5-221 (352)
78 COG3638 ABC-type phosphate/pho 100.0 1E-38 2.2E-43 337.7 19.5 217 163-414 15-237 (258)
79 PRK13537 nodulation ABC transp 100.0 5.7E-38 1.2E-42 365.9 26.7 214 846-1084 7-222 (306)
80 TIGR02314 ABC_MetN D-methionin 100.0 1.3E-37 2.8E-42 365.4 26.8 217 847-1084 2-225 (343)
81 TIGR02314 ABC_MetN D-methionin 100.0 1.9E-37 4.2E-42 364.0 27.5 206 165-413 18-229 (343)
82 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-37 3E-42 350.9 24.6 214 847-1084 1-221 (235)
83 PRK11650 ugpC glycerol-3-phosp 100.0 1.3E-37 2.9E-42 368.5 25.1 206 165-413 17-223 (356)
84 TIGR03258 PhnT 2-aminoethylpho 100.0 3.2E-37 7E-42 365.1 27.3 207 165-413 18-227 (362)
85 TIGR03265 PhnT2 putative 2-ami 100.0 2.6E-37 5.6E-42 365.6 26.1 214 846-1084 4-219 (353)
86 PRK11432 fbpC ferric transport 100.0 2E-37 4.3E-42 365.9 25.1 206 165-413 19-225 (351)
87 TIGR03265 PhnT2 putative 2-ami 100.0 2E-37 4.3E-42 366.6 25.0 207 165-414 17-224 (353)
88 PRK11650 ugpC glycerol-3-phosp 100.0 2.8E-37 6.2E-42 365.6 26.0 214 847-1084 4-219 (356)
89 COG1122 CbiO ABC-type cobalt t 100.0 2.1E-37 4.7E-42 342.6 23.0 207 165-414 17-228 (235)
90 PRK11432 fbpC ferric transport 100.0 4.3E-37 9.3E-42 363.0 26.6 215 846-1085 6-222 (351)
91 PRK13536 nodulation factor exp 100.0 7.8E-37 1.7E-41 359.7 28.0 215 845-1084 40-256 (340)
92 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-37 2.5E-42 314.7 17.8 196 877-1084 17-214 (231)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 5.1E-37 1.1E-41 363.4 26.4 214 846-1084 5-223 (362)
94 COG1124 DppF ABC-type dipeptid 100.0 2.8E-37 6E-42 329.9 21.6 206 165-414 20-231 (252)
95 COG3840 ThiQ ABC-type thiamine 100.0 1.7E-37 3.8E-42 313.5 18.2 201 170-413 17-218 (231)
96 PRK09452 potA putrescine/sperm 100.0 4.7E-37 1E-41 364.9 25.1 218 165-433 27-245 (375)
97 COG1122 CbiO ABC-type cobalt t 100.0 3E-37 6.6E-42 341.4 21.5 215 846-1084 3-223 (235)
98 COG2274 SunT ABC-type bacterio 100.0 5.7E-38 1.2E-42 394.8 17.9 207 166-414 487-696 (709)
99 TIGR01186 proV glycine betaine 100.0 6.5E-37 1.4E-41 361.2 25.7 207 165-414 6-219 (363)
100 cd03259 ABC_Carb_Solutes_like 100.0 8E-37 1.7E-41 339.5 24.4 210 848-1082 2-213 (213)
101 COG1137 YhbG ABC-type (unclass 100.0 8.7E-38 1.9E-42 320.7 15.0 208 868-1085 13-224 (243)
102 KOG0057 Mitochondrial Fe/S clu 100.0 2.5E-37 5.4E-42 359.8 20.6 228 111-414 344-574 (591)
103 PRK10851 sulfate/thiosulfate t 100.0 1.2E-36 2.6E-41 359.9 26.8 216 847-1084 3-221 (353)
104 TIGR00960 3a0501s02 Type II (G 100.0 9.1E-37 2E-41 339.8 24.2 207 847-1075 2-214 (216)
105 COG2884 FtsE Predicted ATPase 100.0 4.4E-37 9.6E-42 313.6 19.6 199 165-407 15-219 (223)
106 COG1124 DppF ABC-type dipeptid 100.0 4.9E-37 1.1E-41 328.0 20.8 217 846-1085 3-227 (252)
107 TIGR01188 drrA daunorubicin re 100.0 6.7E-37 1.5E-41 357.3 23.9 202 871-1084 5-208 (302)
108 PRK13537 nodulation ABC transp 100.0 1.8E-36 3.8E-41 353.3 27.2 206 165-414 20-227 (306)
109 PRK09452 potA putrescine/sperm 100.0 1.6E-36 3.4E-41 360.5 26.5 214 846-1084 14-229 (375)
110 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.1E-36 4.5E-41 337.8 25.7 215 848-1084 2-218 (220)
111 cd03269 ABC_putative_ATPase Th 100.0 1.8E-36 3.8E-41 336.0 24.8 209 848-1082 2-210 (210)
112 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-36 5.4E-41 352.6 26.5 214 846-1084 4-219 (303)
113 cd03265 ABC_DrrA DrrA is the A 100.0 2.4E-36 5.3E-41 337.2 25.2 213 847-1084 1-216 (220)
114 cd03301 ABC_MalK_N The N-termi 100.0 2.6E-36 5.6E-41 335.5 25.1 211 847-1082 1-213 (213)
115 PRK11153 metN DL-methionine tr 100.0 2.5E-36 5.4E-41 357.3 26.4 217 847-1084 2-225 (343)
116 PRK11607 potG putrescine trans 100.0 1.9E-36 4.2E-41 360.4 25.3 206 165-413 32-238 (377)
117 cd03219 ABC_Mj1267_LivG_branch 100.0 3E-36 6.6E-41 340.3 25.4 215 848-1084 2-227 (236)
118 PRK11607 potG putrescine trans 100.0 4.7E-36 1E-40 357.1 28.3 214 846-1084 19-234 (377)
119 KOG0055 Multidrug/pheromone ex 100.0 6.9E-37 1.5E-41 387.9 22.2 214 158-414 997-1213(1228)
120 PRK11000 maltose/maltodextrin 100.0 3.5E-36 7.6E-41 358.8 27.0 214 846-1084 3-218 (369)
121 PRK10851 sulfate/thiosulfate t 100.0 2.3E-36 5E-41 357.5 24.9 210 165-413 15-225 (353)
122 TIGR01186 proV glycine betaine 100.0 2.6E-36 5.6E-41 356.2 25.3 203 870-1084 4-214 (363)
123 cd03296 ABC_CysA_sulfate_impor 100.0 4.9E-36 1.1E-40 339.1 26.2 216 847-1084 3-221 (239)
124 PRK09536 btuD corrinoid ABC tr 100.0 2.5E-36 5.5E-41 360.4 25.0 218 846-1085 3-224 (402)
125 cd03218 ABC_YhbG The ABC trans 100.0 4.2E-36 9E-41 338.3 24.9 213 847-1084 1-217 (232)
126 cd03266 ABC_NatA_sodium_export 100.0 3.2E-36 7E-41 335.9 23.8 215 847-1082 2-218 (218)
127 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.4E-36 7.3E-41 335.7 23.7 208 847-1075 1-216 (218)
128 COG0410 LivF ABC-type branched 100.0 2.1E-36 4.5E-41 321.1 20.7 207 164-414 15-226 (237)
129 cd03261 ABC_Org_Solvent_Resist 100.0 4.4E-36 9.6E-41 338.6 24.5 207 165-413 13-225 (235)
130 TIGR03522 GldA_ABC_ATP gliding 100.0 5.2E-36 1.1E-40 349.4 25.8 212 847-1084 3-216 (301)
131 cd03268 ABC_BcrA_bacitracin_re 100.0 3.8E-36 8.3E-41 332.8 23.4 207 847-1082 1-208 (208)
132 cd03260 ABC_PstB_phosphate_tra 100.0 4.1E-36 8.8E-41 337.2 23.8 214 847-1084 1-224 (227)
133 TIGR01188 drrA daunorubicin re 100.0 3.6E-36 7.8E-41 351.1 24.1 206 165-414 6-213 (302)
134 cd03234 ABCG_White The White s 100.0 7.2E-36 1.6E-40 334.8 25.3 221 847-1082 4-226 (226)
135 PRK11153 metN DL-methionine tr 100.0 8.8E-36 1.9E-40 352.7 27.4 206 165-413 18-229 (343)
136 COG4559 ABC-type hemin transpo 100.0 2E-36 4.3E-41 313.4 18.9 207 165-413 14-229 (259)
137 PRK11000 maltose/maltodextrin 100.0 4.9E-36 1.1E-40 357.6 25.2 206 165-413 16-222 (369)
138 PRK09493 glnQ glutamine ABC tr 100.0 8.4E-36 1.8E-40 337.4 25.7 214 847-1084 2-220 (240)
139 cd03226 ABC_cobalt_CbiO_domain 100.0 3.3E-36 7.1E-41 332.5 21.8 191 872-1078 13-204 (205)
140 cd03258 ABC_MetN_methionine_tr 100.0 5.8E-36 1.3E-40 337.3 24.1 217 847-1084 2-225 (233)
141 TIGR02673 FtsE cell division A 100.0 5.5E-36 1.2E-40 333.1 23.6 206 847-1075 2-213 (214)
142 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.3E-36 1.6E-40 343.0 24.9 204 869-1084 34-245 (269)
143 PRK13637 cbiO cobalt transport 100.0 8.7E-36 1.9E-40 345.2 25.6 218 847-1084 3-229 (287)
144 cd03256 ABC_PhnC_transporter A 100.0 5.4E-36 1.2E-40 339.4 23.4 216 848-1084 2-229 (241)
145 COG0411 LivG ABC-type branched 100.0 1.4E-36 3.1E-41 324.8 17.3 221 163-414 15-239 (250)
146 KOG0058 Peptide exporter, ABC 100.0 6.7E-37 1.5E-41 368.8 16.6 219 843-1084 462-686 (716)
147 COG2274 SunT ABC-type bacterio 100.0 8.3E-35 1.8E-39 366.2 35.9 217 840-1084 465-691 (709)
148 KOG0062 ATPase component of AB 100.0 6.3E-36 1.4E-40 344.6 23.5 204 844-1084 360-564 (582)
149 COG4152 ABC-type uncharacteriz 100.0 2.2E-36 4.8E-41 319.0 18.0 203 869-1084 12-214 (300)
150 cd03292 ABC_FtsE_transporter F 100.0 9.2E-36 2E-40 331.3 24.1 205 848-1075 2-212 (214)
151 cd03263 ABC_subfamily_A The AB 100.0 9.5E-36 2.1E-40 332.6 24.1 214 847-1084 1-216 (220)
152 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.1E-35 2.3E-40 336.9 24.8 213 848-1084 2-220 (242)
153 PRK11264 putative amino-acid A 100.0 1.4E-35 3E-40 337.8 25.6 214 847-1084 4-228 (250)
154 cd03224 ABC_TM1139_LivF_branch 100.0 9.5E-36 2E-40 333.1 23.3 211 847-1084 1-216 (222)
155 TIGR02315 ABC_phnC phosphonate 100.0 6.2E-36 1.3E-40 339.3 21.7 217 847-1084 2-230 (243)
156 PRK11629 lolD lipoprotein tran 100.0 2.7E-35 5.9E-40 331.7 26.8 217 846-1084 5-229 (233)
157 PRK11248 tauB taurine transpor 100.0 2.4E-35 5.1E-40 335.9 26.3 212 847-1084 2-215 (255)
158 PRK13647 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 340.9 25.1 215 846-1084 4-222 (274)
159 PRK11831 putative ABC transpor 100.0 2.3E-35 5E-40 339.0 26.4 215 846-1084 7-228 (269)
160 PRK13637 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 342.3 25.6 218 165-425 20-248 (287)
161 PRK13536 nodulation factor exp 100.0 1.5E-35 3.3E-40 348.8 25.1 206 165-414 54-261 (340)
162 PRK13651 cobalt transporter AT 100.0 2.1E-35 4.5E-40 343.6 25.6 218 847-1084 3-249 (305)
163 cd03262 ABC_HisP_GlnQ_permease 100.0 1.5E-35 3.3E-40 329.3 23.3 205 848-1075 2-211 (213)
164 COG0410 LivF ABC-type branched 100.0 1.1E-35 2.4E-40 315.7 20.8 204 869-1085 13-222 (237)
165 cd03264 ABC_drug_resistance_li 100.0 1.9E-35 4.1E-40 328.0 23.5 209 847-1082 1-211 (211)
166 PRK13634 cbiO cobalt transport 100.0 2E-35 4.3E-40 342.7 24.6 218 847-1084 3-230 (290)
167 COG4175 ProV ABC-type proline/ 100.0 4.4E-36 9.5E-41 327.4 17.7 224 163-437 39-269 (386)
168 PRK13643 cbiO cobalt transport 100.0 2.6E-35 5.7E-40 341.3 25.3 218 847-1084 2-228 (288)
169 PRK13631 cbiO cobalt transport 100.0 2.4E-35 5.3E-40 345.0 25.2 218 846-1084 21-260 (320)
170 cd03258 ABC_MetN_methionine_tr 100.0 3.9E-35 8.4E-40 330.6 26.0 205 166-413 19-229 (233)
171 PRK10619 histidine/lysine/argi 100.0 4E-35 8.7E-40 335.2 26.4 215 846-1084 5-236 (257)
172 cd03259 ABC_Carb_Solutes_like 100.0 2E-35 4.4E-40 328.3 23.2 200 165-407 13-213 (213)
173 cd03235 ABC_Metallic_Cations A 100.0 1.2E-35 2.6E-40 330.0 21.4 199 872-1082 12-213 (213)
174 COG4559 ABC-type hemin transpo 100.0 1.1E-35 2.3E-40 308.0 19.3 216 847-1085 2-226 (259)
175 cd03265 ABC_DrrA DrrA is the A 100.0 2.6E-35 5.6E-40 329.0 23.9 205 165-412 13-219 (220)
176 TIGR00972 3a0107s01c2 phosphat 100.0 4.1E-35 8.9E-40 333.2 25.8 214 847-1084 2-227 (247)
177 cd03257 ABC_NikE_OppD_transpor 100.0 2.6E-35 5.7E-40 331.0 23.9 217 847-1082 2-228 (228)
178 cd03225 ABC_cobalt_CbiO_domain 100.0 1.8E-35 3.9E-40 328.2 22.2 193 872-1075 14-210 (211)
179 PRK10908 cell division protein 100.0 3.5E-35 7.5E-40 328.4 24.7 206 847-1075 2-213 (222)
180 PRK10895 lipopolysaccharide AB 100.0 2.9E-35 6.2E-40 333.3 24.3 214 847-1084 4-221 (241)
181 PRK13636 cbiO cobalt transport 100.0 3.7E-35 8E-40 339.5 25.3 215 846-1084 5-226 (283)
182 COG0411 LivG ABC-type branched 100.0 1.3E-35 2.9E-40 317.4 19.8 208 869-1085 14-235 (250)
183 COG4988 CydD ABC-type transpor 100.0 1.9E-35 4E-40 350.8 23.1 206 166-414 335-543 (559)
184 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.1E-35 8.9E-40 336.8 25.2 207 164-413 36-249 (269)
185 COG1137 YhbG ABC-type (unclass 100.0 2.2E-36 4.7E-41 310.5 13.0 209 164-414 16-228 (243)
186 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.5E-35 1.2E-39 329.9 25.8 212 847-1084 2-216 (236)
187 PRK15079 oligopeptide ABC tran 100.0 5.6E-35 1.2E-39 343.1 26.7 230 846-1085 8-247 (331)
188 PRK11247 ssuB aliphatic sulfon 100.0 3.8E-35 8.2E-40 333.7 24.4 206 846-1084 12-218 (257)
189 TIGR01288 nodI ATP-binding ABC 100.0 3.6E-35 7.8E-40 342.9 24.8 206 165-414 17-224 (303)
190 PRK13650 cbiO cobalt transport 100.0 3.2E-35 6.8E-40 339.3 23.9 216 846-1084 4-224 (279)
191 PRK13646 cbiO cobalt transport 100.0 3.7E-35 8.1E-40 339.9 24.6 218 846-1084 2-230 (286)
192 PRK13650 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 337.2 26.0 217 165-425 20-243 (279)
193 PRK13634 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 340.8 24.1 218 165-425 20-249 (290)
194 cd03219 ABC_Mj1267_LivG_branch 100.0 4.2E-35 9.1E-40 331.1 24.2 215 165-413 13-231 (236)
195 PRK13643 cbiO cobalt transport 100.0 4.8E-35 1E-39 339.2 25.1 224 166-433 20-255 (288)
196 TIGR03005 ectoine_ehuA ectoine 100.0 5.9E-35 1.3E-39 332.9 25.5 214 847-1084 1-231 (252)
197 TIGR03740 galliderm_ABC gallid 100.0 7.5E-35 1.6E-39 325.9 25.9 208 848-1085 2-209 (223)
198 cd03296 ABC_CysA_sulfate_impor 100.0 5.1E-35 1.1E-39 330.8 24.3 210 165-413 15-225 (239)
199 TIGR01978 sufC FeS assembly AT 100.0 7.1E-35 1.5E-39 330.7 25.6 219 847-1084 1-229 (243)
200 PRK11614 livF leucine/isoleuci 100.0 4.4E-35 9.6E-40 330.9 23.6 212 846-1084 5-221 (237)
201 PRK14247 phosphate ABC transpo 100.0 9.3E-35 2E-39 331.0 26.4 216 847-1084 4-229 (250)
202 PRK11124 artP arginine transpo 100.0 7.1E-35 1.5E-39 330.3 25.2 213 847-1084 3-225 (242)
203 PRK13641 cbiO cobalt transport 100.0 6.3E-35 1.4E-39 338.2 25.1 219 846-1084 2-229 (287)
204 cd03218 ABC_YhbG The ABC trans 100.0 6.3E-35 1.4E-39 328.7 24.2 205 165-413 13-221 (232)
205 PRK13644 cbiO cobalt transport 100.0 5.5E-35 1.2E-39 336.4 24.1 213 847-1084 2-219 (274)
206 PRK14273 phosphate ABC transpo 100.0 9.5E-35 2.1E-39 331.6 25.9 215 846-1084 7-233 (254)
207 PRK11300 livG leucine/isoleuci 100.0 8E-35 1.7E-39 332.6 25.0 217 846-1084 5-238 (255)
208 cd03301 ABC_MalK_N The N-termi 100.0 7E-35 1.5E-39 324.0 23.7 199 166-407 14-213 (213)
209 PRK10070 glycine betaine trans 100.0 6.9E-35 1.5E-39 347.9 25.3 206 165-413 41-253 (400)
210 cd03260 ABC_PstB_phosphate_tra 100.0 3.7E-35 8E-40 329.4 21.7 203 166-411 14-226 (227)
211 PRK14267 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 331.1 25.8 217 846-1084 4-232 (253)
212 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.3E-35 1.6E-39 325.4 23.9 201 165-410 17-219 (220)
213 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.5E-35 1.4E-39 323.7 23.2 194 877-1082 16-211 (211)
214 cd03263 ABC_subfamily_A The AB 100.0 5.5E-35 1.2E-39 326.5 22.7 203 165-412 15-219 (220)
215 PRK14268 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 331.0 26.3 214 846-1084 12-237 (258)
216 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.9E-35 1.3E-39 325.8 22.8 195 165-403 17-218 (218)
217 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-34 2.7E-39 328.4 25.8 215 847-1084 3-226 (242)
218 TIGR02211 LolD_lipo_ex lipopro 100.0 9.2E-35 2E-39 324.9 24.4 210 847-1078 2-219 (221)
219 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-35 1.5E-39 340.0 24.3 205 165-414 15-221 (301)
220 PRK13548 hmuV hemin importer A 100.0 9.2E-35 2E-39 332.0 24.8 213 847-1084 3-225 (258)
221 PRK11174 cysteine/glutathione 100.0 3.2E-35 6.9E-40 375.3 23.3 207 165-414 363-572 (588)
222 PRK13647 cbiO cobalt transport 100.0 8E-35 1.7E-39 335.1 24.3 215 166-424 19-239 (274)
223 PRK13652 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 334.8 25.4 214 847-1084 4-222 (277)
224 TIGR00960 3a0501s02 Type II (G 100.0 4.1E-35 8.9E-40 326.5 21.1 195 165-403 16-216 (216)
225 PRK11629 lolD lipoprotein tran 100.0 1.8E-34 3.9E-39 325.1 26.3 201 165-409 22-229 (233)
226 PRK10070 glycine betaine trans 100.0 8.7E-35 1.9E-39 347.0 24.7 203 870-1084 39-249 (400)
227 TIGR03415 ABC_choXWV_ATP choli 100.0 9.4E-35 2E-39 344.2 24.8 208 163-413 35-253 (382)
228 cd03266 ABC_NatA_sodium_export 100.0 1.1E-34 2.4E-39 323.5 23.9 198 166-407 19-218 (218)
229 PRK13631 cbiO cobalt transport 100.0 9.9E-35 2.1E-39 339.8 24.5 219 165-427 39-281 (320)
230 PRK13651 cobalt transporter AT 100.0 7.6E-35 1.6E-39 338.9 23.4 217 165-425 20-268 (305)
231 PRK13635 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 334.4 24.7 215 846-1084 5-224 (279)
232 cd03224 ABC_TM1139_LivF_branch 100.0 9.8E-35 2.1E-39 325.0 23.3 203 165-413 13-220 (222)
233 PRK11831 putative ABC transpor 100.0 2.2E-34 4.7E-39 330.9 26.7 207 165-413 20-232 (269)
234 PRK11231 fecE iron-dicitrate t 100.0 1E-34 2.2E-39 331.4 23.8 217 847-1085 3-223 (255)
235 PRK09473 oppD oligopeptide tra 100.0 2E-34 4.2E-39 338.7 26.8 214 165-414 29-251 (330)
236 PRK14245 phosphate ABC transpo 100.0 2.2E-34 4.8E-39 327.8 26.3 219 846-1084 3-229 (250)
237 PRK13638 cbiO cobalt transport 100.0 1.3E-34 2.7E-39 333.4 24.4 213 847-1084 2-220 (271)
238 PRK14242 phosphate transporter 100.0 2.3E-34 5E-39 328.3 26.4 220 845-1084 5-232 (253)
239 PRK10253 iron-enterobactin tra 100.0 1.1E-34 2.4E-39 332.8 23.8 218 846-1085 7-229 (265)
240 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.4E-34 3E-39 327.9 24.2 206 165-413 14-224 (242)
241 COG1132 MdlB ABC-type multidru 100.0 4.5E-35 9.8E-40 371.8 22.6 209 164-414 341-552 (567)
242 cd03256 ABC_PhnC_transporter A 100.0 1.1E-34 2.5E-39 328.6 23.5 214 165-413 14-233 (241)
243 PRK14241 phosphate transporter 100.0 2.3E-34 5E-39 329.2 26.2 217 846-1084 4-237 (258)
244 cd03269 ABC_putative_ATPase Th 100.0 8.2E-35 1.8E-39 322.7 21.8 198 165-407 13-210 (210)
245 PRK09984 phosphonate/organopho 100.0 1.4E-34 3E-39 331.8 24.3 220 846-1085 4-238 (262)
246 PRK11022 dppD dipeptide transp 100.0 2.9E-34 6.3E-39 337.1 27.6 220 847-1084 4-238 (326)
247 cd03233 ABC_PDR_domain1 The pl 100.0 1.9E-34 4E-39 317.2 24.3 196 846-1082 3-202 (202)
248 PRK10575 iron-hydroxamate tran 100.0 1.5E-34 3.2E-39 331.7 24.4 218 846-1085 11-233 (265)
249 PRK10744 pstB phosphate transp 100.0 2.3E-34 5.1E-39 329.3 25.9 218 843-1084 10-239 (260)
250 cd03232 ABC_PDR_domain2 The pl 100.0 1.5E-34 3.3E-39 315.5 23.0 190 846-1082 3-192 (192)
251 PRK13639 cbiO cobalt transport 100.0 2E-34 4.4E-39 332.1 25.2 214 847-1084 2-221 (275)
252 PRK09473 oppD oligopeptide tra 100.0 3.3E-34 7.2E-39 336.8 27.2 225 846-1085 12-247 (330)
253 TIGR02769 nickel_nikE nickel i 100.0 2.5E-34 5.4E-39 329.9 25.6 223 847-1084 3-235 (265)
254 TIGR03415 ABC_choXWV_ATP choli 100.0 1.7E-34 3.6E-39 342.1 24.8 204 870-1085 35-250 (382)
255 TIGR03410 urea_trans_UrtE urea 100.0 1.6E-34 3.5E-39 324.9 23.5 211 847-1085 1-217 (230)
256 PRK09536 btuD corrinoid ABC tr 100.0 1.3E-34 2.8E-39 345.7 24.0 209 165-413 16-227 (402)
257 COG4525 TauB ABC-type taurine 100.0 8.9E-35 1.9E-39 296.6 19.2 201 872-1085 18-220 (259)
258 TIGR03873 F420-0_ABC_ATP propo 100.0 1.6E-34 3.5E-39 330.1 23.7 217 847-1085 2-222 (256)
259 PRK14256 phosphate ABC transpo 100.0 5E-34 1.1E-38 325.3 27.6 220 846-1084 4-231 (252)
260 cd03300 ABC_PotA_N PotA is an 100.0 3.1E-34 6.7E-39 322.8 25.5 213 847-1084 1-215 (232)
261 COG4988 CydD ABC-type transpor 100.0 5.8E-35 1.3E-39 346.6 20.5 213 843-1084 317-538 (559)
262 PRK15079 oligopeptide ABC tran 100.0 2.1E-34 4.5E-39 338.3 25.0 208 165-413 34-250 (331)
263 PRK13649 cbiO cobalt transport 100.0 2.5E-34 5.5E-39 332.7 25.3 217 847-1084 3-229 (280)
264 PRK11308 dppF dipeptide transp 100.0 3.7E-34 8E-39 336.0 26.9 226 846-1085 5-240 (327)
265 cd03233 ABC_PDR_domain1 The pl 100.0 2.4E-34 5.1E-39 316.4 23.6 180 163-407 18-202 (202)
266 PRK10584 putative ABC transpor 100.0 3.4E-34 7.3E-39 321.9 25.2 213 846-1080 6-226 (228)
267 COG0444 DppD ABC-type dipeptid 100.0 2.8E-34 6E-39 320.7 24.1 232 164-438 17-259 (316)
268 PRK14237 phosphate transporter 100.0 5.3E-34 1.2E-38 327.4 27.3 222 843-1084 17-246 (267)
269 KOG0057 Mitochondrial Fe/S clu 100.0 5.6E-35 1.2E-39 340.2 19.2 212 843-1084 348-569 (591)
270 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.2E-34 6.9E-39 323.7 24.9 206 165-414 14-221 (236)
271 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-34 2.9E-39 328.4 22.0 213 165-412 15-233 (243)
272 PRK14269 phosphate ABC transpo 100.0 3.3E-34 7.2E-39 325.5 25.2 215 847-1084 3-225 (246)
273 TIGR01277 thiQ thiamine ABC tr 100.0 2.9E-34 6.3E-39 318.8 24.0 198 874-1083 13-212 (213)
274 PRK14235 phosphate transporter 100.0 4.5E-34 9.8E-39 328.0 26.3 216 846-1084 19-246 (267)
275 TIGR01184 ntrCD nitrate transp 100.0 1.8E-34 3.8E-39 324.1 22.3 198 875-1084 1-199 (230)
276 PRK11022 dppD dipeptide transp 100.0 4.2E-34 9.1E-39 335.7 26.4 214 165-414 20-243 (326)
277 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-34 2.8E-39 319.8 20.7 192 165-404 13-205 (205)
278 TIGR00968 3a0106s01 sulfate AB 100.0 4.4E-34 9.4E-39 322.5 25.4 212 848-1084 2-215 (237)
279 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-34 3.5E-39 319.8 21.5 195 165-407 13-208 (208)
280 PRK13632 cbiO cobalt transport 100.0 3.2E-34 6.8E-39 330.0 24.5 215 846-1084 7-226 (271)
281 PRK13549 xylose transporter AT 100.0 2.5E-34 5.3E-39 359.7 25.5 221 846-1086 5-229 (506)
282 PRK13646 cbiO cobalt transport 100.0 2.5E-34 5.4E-39 333.1 23.5 206 165-413 20-234 (286)
283 PRK09493 glnQ glutamine ABC tr 100.0 3.5E-34 7.7E-39 324.2 24.2 205 165-413 14-224 (240)
284 PRK15093 antimicrobial peptide 100.0 6E-34 1.3E-38 335.6 26.9 222 847-1084 4-243 (330)
285 COG0444 DppD ABC-type dipeptid 100.0 5.1E-34 1.1E-38 318.6 24.8 224 847-1084 2-238 (316)
286 PRK14250 phosphate ABC transpo 100.0 2.9E-34 6.3E-39 324.8 23.2 209 846-1084 3-216 (241)
287 PRK13547 hmuV hemin importer A 100.0 3E-34 6.6E-39 329.0 23.6 219 847-1085 2-240 (272)
288 PRK11308 dppF dipeptide transp 100.0 6.3E-34 1.4E-38 334.1 26.8 208 165-414 28-244 (327)
289 PRK11264 putative amino-acid A 100.0 3.6E-34 7.7E-39 326.3 24.0 204 166-413 17-232 (250)
290 PRK13640 cbiO cobalt transport 100.0 3.3E-34 7.1E-39 331.4 23.9 217 846-1084 5-227 (282)
291 TIGR02211 LolD_lipo_ex lipopro 100.0 5E-34 1.1E-38 319.0 24.6 196 165-404 18-220 (221)
292 PRK00635 excinuclease ABC subu 100.0 1.2E-32 2.6E-37 367.1 42.1 135 943-1085 759-902 (1809)
293 PRK13635 cbiO cobalt transport 100.0 4.1E-34 8.8E-39 329.9 24.6 216 165-424 20-242 (279)
294 cd03267 ABC_NatA_like Similar 100.0 4.4E-34 9.6E-39 322.1 24.1 201 870-1082 32-236 (236)
295 COG4618 ArpD ABC-type protease 100.0 9.4E-35 2E-39 334.8 18.8 212 164-416 348-562 (580)
296 COG4181 Predicted ABC-type tra 100.0 1.7E-34 3.6E-39 288.7 18.1 197 870-1079 21-225 (228)
297 TIGR03608 L_ocin_972_ABC putat 100.0 3.5E-34 7.6E-39 316.7 22.7 189 872-1072 11-206 (206)
298 COG4525 TauB ABC-type taurine 100.0 2.8E-34 6.1E-39 293.0 20.0 204 165-413 18-223 (259)
299 PRK14259 phosphate ABC transpo 100.0 4.7E-34 1E-38 328.0 24.5 215 845-1084 12-248 (269)
300 cd03257 ABC_NikE_OppD_transpor 100.0 7.3E-34 1.6E-38 319.3 25.5 201 166-407 19-228 (228)
301 PRK13648 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 327.7 25.0 216 846-1085 7-227 (269)
302 PRK13645 cbiO cobalt transport 100.0 4.6E-34 1E-38 331.7 24.5 219 846-1084 6-235 (289)
303 PRK13641 cbiO cobalt transport 100.0 3.6E-34 7.9E-39 331.8 23.4 205 165-413 20-233 (287)
304 PRK13633 cobalt transporter AT 100.0 4.4E-34 9.5E-39 330.2 24.0 219 846-1084 4-228 (280)
305 cd03264 ABC_drug_resistance_li 100.0 2.6E-34 5.7E-39 318.8 21.2 196 166-407 14-211 (211)
306 PRK13632 cbiO cobalt transport 100.0 7.4E-34 1.6E-38 326.9 25.6 205 165-413 22-230 (271)
307 cd03299 ABC_ModC_like Archeal 100.0 8.2E-34 1.8E-38 319.9 25.4 199 874-1084 14-214 (235)
308 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.2E-33 6.9E-38 362.4 34.5 209 845-1084 450-668 (686)
309 PRK13636 cbiO cobalt transport 100.0 5.3E-34 1.2E-38 329.8 24.3 207 165-414 19-231 (283)
310 cd03292 ABC_FtsE_transporter F 100.0 2.9E-34 6.3E-39 319.3 21.2 195 165-403 14-214 (214)
311 PRK10771 thiQ thiamine transpo 100.0 5.2E-34 1.1E-38 321.1 23.4 211 847-1084 2-214 (232)
312 PRK13644 cbiO cobalt transport 100.0 6.1E-34 1.3E-38 327.8 24.3 203 166-413 16-223 (274)
313 PRK15112 antimicrobial peptide 100.0 6.7E-34 1.4E-38 326.6 24.4 223 847-1084 5-234 (267)
314 PRK14270 phosphate ABC transpo 100.0 9.9E-34 2.2E-38 322.7 25.7 215 846-1084 4-230 (251)
315 PRK11144 modC molybdate transp 100.0 4E-34 8.6E-39 339.8 23.3 195 170-413 16-217 (352)
316 PRK14239 phosphate transporter 100.0 1E-33 2.2E-38 322.9 25.7 215 846-1084 5-231 (252)
317 PRK14257 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 331.6 26.8 222 845-1084 79-308 (329)
318 cd03234 ABCG_White The White s 100.0 5.3E-34 1.2E-38 319.7 22.9 202 165-407 20-226 (226)
319 PRK10895 lipopolysaccharide AB 100.0 5.5E-34 1.2E-38 322.8 23.2 206 165-413 16-225 (241)
320 PRK14262 phosphate ABC transpo 100.0 1.1E-33 2.5E-38 322.1 25.9 214 847-1084 4-229 (250)
321 TIGR02142 modC_ABC molybdenum 100.0 6.9E-34 1.5E-38 338.2 25.1 194 877-1084 15-216 (354)
322 PRK14257 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 332.1 26.2 211 165-413 95-312 (329)
323 PRK14244 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 322.3 25.6 218 848-1084 7-232 (251)
324 cd03213 ABCG_EPDR ABCG transpo 100.0 8E-34 1.7E-38 310.2 23.4 190 846-1082 3-194 (194)
325 PRK14274 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 323.5 25.7 215 846-1084 12-238 (259)
326 PRK14258 phosphate ABC transpo 100.0 1.4E-33 3E-38 323.0 26.3 221 846-1084 7-240 (261)
327 PRK11248 tauB taurine transpor 100.0 7.4E-34 1.6E-38 323.6 23.8 201 165-410 14-216 (255)
328 PRK14240 phosphate transporter 100.0 1.3E-33 2.9E-38 321.5 25.9 215 846-1084 3-229 (250)
329 PRK13652 cbiO cobalt transport 100.0 6.1E-34 1.3E-38 328.5 23.4 205 166-413 18-226 (277)
330 PRK11144 modC molybdate transp 100.0 8E-34 1.7E-38 337.2 25.0 190 877-1084 16-213 (352)
331 KOG0056 Heavy metal exporter H 100.0 3.9E-35 8.5E-40 331.9 12.9 210 163-414 549-761 (790)
332 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.9E-33 1.3E-37 361.6 35.2 210 845-1084 476-695 (710)
333 TIGR02673 FtsE cell division A 100.0 6E-34 1.3E-38 316.7 22.2 194 165-402 15-214 (214)
334 PRK14260 phosphate ABC transpo 100.0 1.4E-33 3E-38 322.8 25.7 216 846-1084 7-238 (259)
335 PRK14253 phosphate ABC transpo 100.0 1.4E-33 3E-38 321.2 25.3 215 846-1084 3-228 (249)
336 PRK00349 uvrA excinuclease ABC 100.0 2.2E-32 4.8E-37 352.8 39.6 122 947-1084 792-922 (943)
337 PRK10762 D-ribose transporter 100.0 9E-34 1.9E-38 354.2 25.9 218 847-1086 5-227 (501)
338 PRK14236 phosphate transporter 100.0 2E-33 4.3E-38 323.5 26.7 216 845-1084 24-251 (272)
339 TIGR03410 urea_trans_UrtE urea 100.0 7.8E-34 1.7E-38 319.4 22.8 202 165-412 13-219 (230)
340 PRK13633 cobalt transporter AT 100.0 9.7E-34 2.1E-38 327.3 24.0 205 165-413 23-232 (280)
341 PRK13642 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 326.3 24.5 216 846-1084 4-224 (277)
342 PRK14273 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 321.0 26.1 206 166-413 21-237 (254)
343 PRK11614 livF leucine/isoleuci 100.0 7.4E-34 1.6E-38 321.0 22.4 203 165-413 18-225 (237)
344 TIGR02142 modC_ABC molybdenum 100.0 9.4E-34 2E-38 337.1 24.4 199 170-413 15-220 (354)
345 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-33 3E-38 320.7 24.7 206 166-413 15-231 (247)
346 PRK13639 cbiO cobalt transport 100.0 1.2E-33 2.5E-38 325.8 24.5 204 166-413 16-225 (275)
347 TIGR02982 heterocyst_DevA ABC 100.0 1.4E-33 2.9E-38 315.1 24.2 209 847-1075 2-217 (220)
348 PRK10584 putative ABC transpor 100.0 2.1E-33 4.5E-38 315.5 25.7 197 166-406 24-227 (228)
349 TIGR02770 nickel_nikD nickel i 100.0 1E-33 2.3E-38 318.1 23.3 207 167-413 1-214 (230)
350 PRK11247 ssuB aliphatic sulfon 100.0 6.8E-34 1.5E-38 323.4 22.0 194 166-410 26-219 (257)
351 COG1245 Predicted ATPase, RNas 100.0 8.8E-33 1.9E-37 313.1 30.7 173 875-1073 357-530 (591)
352 PRK14249 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 319.9 26.0 219 846-1084 4-230 (251)
353 PRK15093 antimicrobial peptide 100.0 1.8E-33 3.9E-38 331.5 26.1 217 165-413 20-247 (330)
354 TIGR01184 ntrCD nitrate transp 100.0 8.8E-34 1.9E-38 318.5 22.3 202 168-412 1-202 (230)
355 cd03297 ABC_ModC_molybdenum_tr 100.0 9.8E-34 2.1E-38 314.9 22.4 191 877-1082 16-214 (214)
356 TIGR02769 nickel_nikE nickel i 100.0 1.4E-33 3.1E-38 323.7 24.4 206 165-413 24-239 (265)
357 COG4987 CydC ABC-type transpor 100.0 9E-35 2E-39 338.5 14.6 208 165-414 351-561 (573)
358 PRK14272 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 319.7 26.3 216 846-1084 4-231 (252)
359 PRK13548 hmuV hemin importer A 100.0 1.2E-33 2.5E-38 322.9 23.5 206 165-413 15-229 (258)
360 TIGR01193 bacteriocin_ABC ABC- 100.0 4.9E-33 1.1E-37 361.9 32.4 211 845-1084 472-692 (708)
361 PRK11701 phnK phosphonate C-P 100.0 2E-33 4.2E-38 321.5 25.3 215 846-1084 6-236 (258)
362 TIGR03005 ectoine_ehuA ectoine 100.0 1.3E-33 2.8E-38 321.9 23.7 206 165-413 13-235 (252)
363 TIGR02770 nickel_nikD nickel i 100.0 1.1E-33 2.4E-38 317.9 22.7 201 874-1084 1-210 (230)
364 PRK10908 cell division protein 100.0 1.1E-33 2.5E-38 316.2 22.7 196 165-404 15-216 (222)
365 PRK13649 cbiO cobalt transport 100.0 2.1E-33 4.5E-38 325.1 25.6 205 165-413 20-233 (280)
366 PRK10418 nikD nickel transport 100.0 2.3E-33 5E-38 320.0 25.6 214 845-1084 3-225 (254)
367 PRK13543 cytochrome c biogenes 100.0 1.6E-33 3.5E-38 312.9 23.6 202 846-1074 11-212 (214)
368 PRK14271 phosphate ABC transpo 100.0 4.3E-33 9.4E-38 320.8 28.0 219 846-1084 21-246 (276)
369 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-33 3.5E-38 319.3 24.1 212 165-413 15-230 (242)
370 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.9E-33 4.2E-38 314.2 24.3 194 868-1082 31-224 (224)
371 PRK13638 cbiO cobalt transport 100.0 2E-33 4.4E-38 323.5 25.0 205 165-413 14-224 (271)
372 PRK14247 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 320.3 24.5 212 166-413 17-233 (250)
373 PRK09700 D-allose transporter 100.0 1.2E-33 2.6E-38 354.1 25.0 218 846-1085 5-230 (510)
374 PRK14261 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 319.5 25.7 215 846-1084 6-232 (253)
375 PRK14268 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 321.5 24.5 210 165-413 25-241 (258)
376 PRK14248 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 322.1 25.8 215 846-1084 21-247 (268)
377 cd03267 ABC_NatA_like Similar 100.0 1.8E-33 3.9E-38 317.2 23.9 202 163-407 32-236 (236)
378 PRK13648 cbiO cobalt transport 100.0 1.9E-33 4.2E-38 323.3 24.6 204 166-413 23-230 (269)
379 PRK11174 cysteine/glutathione 100.0 3.9E-34 8.5E-39 365.2 20.9 210 845-1084 348-567 (588)
380 cd03225 ABC_cobalt_CbiO_domain 100.0 1.1E-33 2.4E-38 313.9 21.7 194 165-402 14-211 (211)
381 PRK14275 phosphate ABC transpo 100.0 2.8E-33 6E-38 324.1 25.9 215 846-1084 39-265 (286)
382 PRK11300 livG leucine/isoleuci 100.0 1.8E-33 3.9E-38 321.5 23.9 221 165-413 18-242 (255)
383 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.7E-34 1.2E-38 369.4 22.4 205 165-414 466-673 (686)
384 PRK10619 histidine/lysine/argi 100.0 1.8E-33 4E-38 321.5 23.9 205 165-413 18-240 (257)
385 PRK14251 phosphate ABC transpo 100.0 3.5E-33 7.7E-38 318.2 25.7 215 846-1084 4-230 (251)
386 COG4148 ModC ABC-type molybdat 100.0 2.2E-34 4.8E-39 308.9 14.8 196 170-414 16-218 (352)
387 PRK14242 phosphate transporter 100.0 2.5E-33 5.4E-38 319.8 24.5 210 166-413 20-236 (253)
388 KOG0066 eIF2-interacting prote 100.0 2.3E-33 5E-38 313.2 23.4 200 844-1083 584-785 (807)
389 PRK14263 phosphate ABC transpo 100.0 4.4E-33 9.5E-38 318.4 26.4 218 846-1084 8-240 (261)
390 PRK10790 putative multidrug tr 100.0 1.2E-33 2.6E-38 360.8 24.2 206 166-414 355-563 (592)
391 PRK13640 cbiO cobalt transport 100.0 2.1E-33 4.5E-38 324.7 23.8 209 165-414 20-232 (282)
392 TIGR03740 galliderm_ABC gallid 100.0 2.3E-33 4.9E-38 314.0 23.4 197 165-410 13-209 (223)
393 PRK13538 cytochrome c biogenes 100.0 1.6E-33 3.6E-38 310.6 21.8 199 847-1072 2-202 (204)
394 COG4181 Predicted ABC-type tra 100.0 1.2E-33 2.6E-38 282.6 18.5 202 160-405 18-226 (228)
395 cd03299 ABC_ModC_like Archeal 100.0 3.3E-33 7.1E-38 315.0 24.5 204 167-413 14-218 (235)
396 PRK15056 manganese/iron transp 100.0 2.3E-33 5E-38 323.0 23.8 218 846-1085 6-226 (272)
397 PRK14237 phosphate transporter 100.0 6.9E-33 1.5E-37 318.1 27.6 211 165-413 33-250 (267)
398 TIGR02633 xylG D-xylose ABC tr 100.0 2.6E-33 5.5E-38 350.5 26.1 219 847-1085 2-226 (500)
399 PRK13642 cbiO cobalt transport 100.0 5.4E-33 1.2E-37 320.6 26.7 205 165-413 20-228 (277)
400 PRK11124 artP arginine transpo 100.0 1.8E-33 4E-38 318.8 22.5 203 166-412 16-228 (242)
401 PRK10744 pstB phosphate transp 100.0 4.6E-33 9.9E-38 318.7 25.9 209 166-413 27-243 (260)
402 cd03231 ABC_CcmA_heme_exporter 100.0 1.8E-33 3.9E-38 309.4 21.5 195 848-1072 2-198 (201)
403 PRK15439 autoinducer 2 ABC tra 100.0 2.5E-33 5.4E-38 350.5 25.6 211 846-1085 11-225 (510)
404 PRK14250 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 317.6 22.8 200 166-413 17-220 (241)
405 PRK14255 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 316.9 26.2 215 846-1084 5-231 (252)
406 cd03298 ABC_ThiQ_thiamine_tran 100.0 2E-33 4.4E-38 311.8 22.0 195 170-407 16-211 (211)
407 TIGR01978 sufC FeS assembly AT 100.0 2.7E-33 5.9E-38 317.7 23.5 213 165-413 13-233 (243)
408 cd03300 ABC_PotA_N PotA is an 100.0 4.4E-33 9.6E-38 313.4 24.9 206 165-413 13-219 (232)
409 PRK11160 cysteine/glutathione 100.0 2E-33 4.3E-38 356.2 24.7 207 165-414 353-562 (574)
410 PRK14245 phosphate ABC transpo 100.0 5.6E-33 1.2E-37 316.3 25.8 210 165-413 16-233 (250)
411 PRK13645 cbiO cobalt transport 100.0 2.3E-33 4.9E-38 325.9 22.8 205 166-413 25-239 (289)
412 PRK14267 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 318.7 23.8 212 166-413 18-236 (253)
413 cd03252 ABCC_Hemolysin The ABC 100.0 7.3E-34 1.6E-38 321.1 18.1 210 847-1084 1-220 (237)
414 PRK15112 antimicrobial peptide 100.0 3.2E-33 7E-38 320.9 23.6 207 165-413 26-238 (267)
415 cd03230 ABC_DR_subfamily_A Thi 100.0 2.6E-33 5.6E-38 300.7 21.3 168 848-1075 2-171 (173)
416 PRK11176 lipid transporter ATP 100.0 1.1E-33 2.4E-38 360.8 21.9 209 165-414 356-567 (582)
417 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 8.9E-34 1.9E-38 369.2 21.4 206 165-414 492-700 (710)
418 CHL00131 ycf16 sulfate ABC tra 100.0 7.1E-33 1.5E-37 316.0 26.1 220 846-1084 7-236 (252)
419 cd03235 ABC_Metallic_Cations A 100.0 1.6E-33 3.5E-38 312.9 20.3 200 165-407 12-213 (213)
420 COG4175 ProV ABC-type proline/ 100.0 6E-34 1.3E-38 310.8 16.3 202 872-1085 41-250 (386)
421 PRK14238 phosphate transporter 100.0 5.2E-33 1.1E-37 319.7 25.1 215 846-1084 24-250 (271)
422 PRK14265 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 319.3 25.7 214 846-1084 20-253 (274)
423 PRK10419 nikE nickel transport 100.0 6.1E-33 1.3E-37 318.6 25.4 224 847-1085 4-237 (268)
424 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-33 2.7E-38 365.9 22.2 206 165-414 494-702 (711)
425 PRK10253 iron-enterobactin tra 100.0 2.9E-33 6.3E-38 321.1 22.8 210 165-413 20-232 (265)
426 PRK11288 araG L-arabinose tran 100.0 3.7E-33 8E-38 348.7 25.6 216 846-1083 4-223 (501)
427 PRK10575 iron-hydroxamate tran 100.0 2.3E-33 5.1E-38 321.8 21.9 209 166-413 25-236 (265)
428 PRK03695 vitamin B12-transport 100.0 3.7E-33 8.1E-38 316.8 23.2 198 874-1085 11-218 (248)
429 PRK14235 phosphate transporter 100.0 4.1E-33 8.9E-38 320.0 23.7 211 166-413 33-250 (267)
430 PRK14254 phosphate ABC transpo 100.0 8E-33 1.7E-37 319.9 26.0 213 846-1084 39-264 (285)
431 TIGR00968 3a0106s01 sulfate AB 100.0 5.9E-33 1.3E-37 313.3 24.3 205 166-413 14-219 (237)
432 PRK09984 phosphonate/organopho 100.0 3.2E-33 7E-38 320.4 22.5 216 165-412 17-240 (262)
433 PRK10771 thiQ thiamine transpo 100.0 4.4E-33 9.6E-38 313.5 23.1 202 170-414 17-219 (232)
434 TIGR02323 CP_lyasePhnK phospho 100.0 6.6E-33 1.4E-37 316.4 24.5 215 846-1084 3-233 (253)
435 COG4987 CydC ABC-type transpor 100.0 8.1E-34 1.8E-38 330.6 17.2 211 846-1084 336-556 (573)
436 PRK14239 phosphate transporter 100.0 8E-33 1.7E-37 315.6 25.1 210 166-413 19-235 (252)
437 PRK14243 phosphate transporter 100.0 6.5E-33 1.4E-37 317.8 24.5 218 846-1084 10-243 (264)
438 TIGR03873 F420-0_ABC_ATP propo 100.0 4.8E-33 1E-37 317.9 23.2 208 165-413 14-225 (256)
439 PRK11231 fecE iron-dicitrate t 100.0 3.5E-33 7.7E-38 318.8 22.1 209 165-413 15-226 (255)
440 PRK10982 galactose/methyl gala 100.0 4.7E-33 1E-37 347.2 25.0 206 871-1085 10-219 (491)
441 PTZ00265 multidrug resistance 100.0 1.2E-33 2.7E-38 384.8 21.5 213 165-414 1181-1452(1466)
442 PRK14256 phosphate ABC transpo 100.0 8.4E-33 1.8E-37 315.2 24.8 212 165-413 17-235 (252)
443 cd03262 ABC_HisP_GlnQ_permease 100.0 3.1E-33 6.6E-38 310.8 20.7 195 165-403 13-213 (213)
444 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.2E-33 4.7E-38 321.3 20.0 211 846-1085 2-221 (275)
445 PRK10247 putative ABC transpor 100.0 4.4E-33 9.5E-38 311.9 21.9 202 846-1075 7-213 (225)
446 TIGR03375 type_I_sec_LssB type 100.0 1.9E-33 4.2E-38 364.9 22.1 208 165-414 478-688 (694)
447 TIGR01277 thiQ thiamine ABC tr 100.0 6.6E-33 1.4E-37 308.0 23.1 199 167-408 13-212 (213)
448 PRK14269 phosphate ABC transpo 100.0 7E-33 1.5E-37 314.6 23.8 212 165-413 15-229 (246)
449 TIGR01846 type_I_sec_HlyB type 100.0 2.9E-32 6.4E-37 353.6 32.9 212 845-1084 454-675 (694)
450 PRK14266 phosphate ABC transpo 100.0 9.8E-33 2.1E-37 314.4 25.1 219 846-1084 3-229 (250)
451 PRK14241 phosphate transporter 100.0 7.1E-33 1.5E-37 316.8 23.9 211 166-413 18-241 (258)
452 TIGR03375 type_I_sec_LssB type 100.0 1.1E-32 2.5E-37 357.7 28.8 212 845-1084 462-683 (694)
453 COG1132 MdlB ABC-type multidru 100.0 1E-33 2.2E-38 359.4 18.5 212 844-1084 326-547 (567)
454 PRK14246 phosphate ABC transpo 100.0 1.4E-32 3.1E-37 313.4 25.8 216 846-1084 10-236 (257)
455 PRK14274 phosphate ABC transpo 100.0 8.6E-33 1.9E-37 316.3 24.1 210 166-413 26-242 (259)
456 PRK09580 sufC cysteine desulfu 100.0 1.2E-32 2.6E-37 313.4 25.1 219 847-1084 2-230 (248)
457 PRK14270 phosphate ABC transpo 100.0 1E-32 2.3E-37 314.3 24.5 211 165-413 17-234 (251)
458 PRK14259 phosphate ABC transpo 100.0 1E-32 2.3E-37 316.9 24.6 209 166-414 27-253 (269)
459 TIGR01193 bacteriocin_ABC ABC- 100.0 2E-33 4.3E-38 365.6 21.1 208 165-414 487-697 (708)
460 COG4604 CeuD ABC-type enteroch 100.0 2.9E-34 6.4E-39 293.6 10.4 207 869-1085 11-221 (252)
461 TIGR01166 cbiO cobalt transpor 100.0 4E-33 8.7E-38 304.1 20.1 179 871-1059 4-188 (190)
462 PRK10790 putative multidrug tr 100.0 3.5E-33 7.5E-38 356.6 22.7 210 845-1084 339-558 (592)
463 cd03229 ABC_Class3 This class 100.0 4.2E-33 9.2E-38 300.4 19.9 170 848-1075 2-177 (178)
464 PRK13539 cytochrome c biogenes 100.0 5.5E-33 1.2E-37 307.0 21.2 198 847-1074 3-200 (207)
465 cd03245 ABCC_bacteriocin_expor 100.0 2.9E-33 6.4E-38 312.5 19.1 209 847-1082 3-220 (220)
466 PRK11176 lipid transporter ATP 100.0 3.4E-33 7.3E-38 356.5 21.9 213 845-1084 340-562 (582)
467 TIGR01189 ccmA heme ABC export 100.0 7.2E-33 1.6E-37 304.1 21.4 194 848-1071 2-197 (198)
468 PRK14252 phosphate ABC transpo 100.0 2.5E-32 5.4E-37 313.5 26.8 216 845-1084 15-244 (265)
469 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.2E-33 4.9E-38 317.3 17.8 210 848-1084 2-221 (238)
470 PRK14262 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 313.7 23.6 211 165-413 16-233 (250)
471 PRK14271 phosphate ABC transpo 100.0 1.6E-32 3.4E-37 316.2 24.9 211 165-413 34-250 (276)
472 PRK11160 cysteine/glutathione 100.0 5.3E-33 1.1E-37 352.4 22.7 212 845-1084 337-557 (574)
473 cd03251 ABCC_MsbA MsbA is an e 100.0 2.7E-33 5.8E-38 315.9 17.8 209 848-1084 2-220 (234)
474 PRK11701 phnK phosphonate C-P 100.0 1.5E-32 3.2E-37 314.2 24.2 206 166-413 20-240 (258)
475 PRK14244 phosphate ABC transpo 100.0 1.1E-32 2.3E-37 314.2 23.0 212 165-413 18-236 (251)
476 COG1123 ATPase components of v 100.0 9.2E-33 2E-37 329.9 23.3 211 163-414 302-519 (539)
477 PRK10418 nikD nickel transport 100.0 1.8E-32 3.9E-37 312.7 24.8 209 166-413 17-229 (254)
478 PRK14240 phosphate transporter 100.0 1.5E-32 3.1E-37 313.0 23.7 210 166-413 17-233 (250)
479 cd03297 ABC_ModC_molybdenum_tr 100.0 1.4E-32 3.1E-37 305.5 23.1 192 170-407 16-214 (214)
480 PRK14275 phosphate ABC transpo 100.0 8.3E-33 1.8E-37 320.2 21.8 204 165-413 52-269 (286)
481 PRK14236 phosphate transporter 100.0 3.4E-32 7.4E-37 313.3 26.7 210 166-413 39-255 (272)
482 PRK14249 phosphate ABC transpo 100.0 2.4E-32 5.3E-37 311.3 25.1 211 165-413 17-234 (251)
483 PRK13546 teichoic acids export 100.0 3.4E-32 7.3E-37 310.5 26.2 194 870-1085 35-228 (264)
484 cd03254 ABCC_Glucan_exporter_l 100.0 3.3E-33 7.2E-38 314.1 17.7 211 846-1084 2-221 (229)
485 PRK14263 phosphate ABC transpo 100.0 1.5E-32 3.2E-37 314.1 23.2 210 164-413 20-244 (261)
486 PRK14248 phosphate ABC transpo 100.0 4E-32 8.7E-37 312.3 26.8 208 165-413 34-251 (268)
487 TIGR00630 uvra excinuclease AB 100.0 4.5E-31 9.7E-36 340.2 39.3 123 946-1084 789-920 (924)
488 TIGR02324 CP_lyasePhnL phospho 100.0 1.8E-32 3.8E-37 307.1 23.2 210 847-1073 2-223 (224)
489 PRK14272 phosphate ABC transpo 100.0 2.5E-32 5.5E-37 311.4 24.6 208 165-413 17-235 (252)
490 PRK14253 phosphate ABC transpo 100.0 1.8E-32 4E-37 312.0 23.2 211 165-413 16-232 (249)
491 PRK14255 phosphate ABC transpo 100.0 6.6E-32 1.4E-36 308.0 27.8 211 165-413 18-235 (252)
492 cd03215 ABC_Carb_Monos_II This 100.0 1E-32 2.3E-37 298.5 19.8 159 874-1075 15-180 (182)
493 PRK14264 phosphate ABC transpo 100.0 3.9E-32 8.5E-37 317.2 26.1 221 846-1084 45-284 (305)
494 PRK03695 vitamin B12-transport 100.0 2.1E-32 4.5E-37 310.7 23.1 201 167-413 11-221 (248)
495 TIGR03269 met_CoM_red_A2 methy 100.0 2.3E-32 5E-37 343.3 25.7 215 847-1084 1-253 (520)
496 PRK14261 phosphate ABC transpo 100.0 3E-32 6.4E-37 310.9 24.1 211 165-413 19-236 (253)
497 PRK09544 znuC high-affinity zi 100.0 2.2E-32 4.7E-37 310.4 22.8 198 846-1084 4-204 (251)
498 COG1129 MglA ABC-type sugar tr 100.0 1.9E-32 4.1E-37 325.3 23.1 217 870-1095 19-242 (500)
499 TIGR00958 3a01208 Conjugate Tr 100.0 7.1E-33 1.5E-37 358.9 21.3 211 845-1084 477-697 (711)
500 PRK13547 hmuV hemin importer A 100.0 2.4E-32 5.3E-37 313.3 23.0 213 165-413 14-243 (272)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-248 Score=2287.45 Aligned_cols=1323 Identities=52% Similarity=0.908 Sum_probs=1232.5
Q ss_pred cchHHhhhHHHHhhCCChhhhhhcccccCCCCccccccCCCChHHHHHHHHhhhcCCCCChHHHHHHHHHHHHhcCCCCC
Q 000540 36 EDDEEALKWAAIEKLPTYNRLKKGLLTTSRGEAFEVDVSNLGPQERQRLINKLVTVPEVDNEKFLLKLKNRIERVGIDLP 115 (1433)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1433)
+||||+|||||+|||||++| +++.+... .++|+.++++.+++...++..+..++|+++++.++++|++++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 44999999999999999999 55543211 179999999999999999999999999999999999999987 899
Q ss_pred cceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccccceeecceeEEEeCCeEEEEEcCCCCcHHHHH
Q 000540 116 KVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLL 195 (1433)
Q Consensus 116 ~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL 195 (1433)
.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+..||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999988766 999999999888777666544 45567899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCC
Q 000540 196 LALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1433)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1433)
++|+|.++..++..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|++++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999988777789999999999999989999999999999999999999999999999998876 455555431
Q ss_pred CCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCC
Q 000540 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLD 355 (1433)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLD 355 (1433)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 36899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 000540 356 SSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1433)
Q Consensus 356 s~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~e 435 (1433)
++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHH
Q 000540 436 VTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLL 515 (1433)
Q Consensus 436 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~ 515 (1433)
+++++++.++|..+..|+.+.++.|+.+.|..++.+.++..+++.++++.+.++.++..++|..+.|+|+++|+.|++.+
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCcc
Q 000540 516 MKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFF 595 (1433)
Q Consensus 516 ~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y 595 (1433)
++||.++++++.++.+++|+++|++|+++.+ ++..++..+.|++||++++.++++++++.++++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999874 55667888999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Q 000540 596 PPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFAL 675 (1433)
Q Consensus 596 ~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~ 675 (1433)
++|++.++.+++++|++++++++|.+|+||++|+.+++++||.|++++++.+++++++|++++++++++.+|+++|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCccccc------------CCC---cccchhhhhhccc
Q 000540 676 LVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHSWKKF------------TPN---SIESLGVQVLKSR 740 (1433)
Q Consensus 676 ~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~G~~~L~~~ 740 (1433)
+++.+++||+|++.+||+||+|++|++|++|+++++++|||++++|.|. ... ....+|.+++..+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 9999999999999999999999999999999999999999999999997 111 1356789999998
Q ss_pred Ccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCccccccCCCCCCcccc
Q 000540 741 GFF-----AHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGTVQLSTHGESGNDIRE 815 (1433)
Q Consensus 741 ~~~-----~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1433)
++. ...+|+|+++|+++||.++|+++.++++.|+++..+.+.++..+...++....... ...
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~-------------~~~ 757 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG-------------SSS 757 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc-------------ccc
Confidence 887 77889999999999999999999999999999988887776544332221100000 000
Q ss_pred cccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCC
Q 000540 816 RNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSG 895 (1433)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nG 895 (1433)
..+ ...+....++.++..|+.|..++++||.|.++++-+++.++ +++++|+|||+.++||.+|||||+||
T Consensus 758 ~~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SG 827 (1391)
T KOG0065|consen 758 EIE-------KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESG 827 (1391)
T ss_pred ccc-------ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCC
Confidence 000 00001111345777888899999999999999998887776 67889999999999999999999999
Q ss_pred CChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH
Q 000540 896 AGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIG 975 (1433)
Q Consensus 896 aGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~ 975 (1433)
||||||||+|+||.++|.++|+|.+||+|.++++++|.+|||.|+|.|.|.+||+|.|.|+|.+|+|.+++.+++.++|+
T Consensus 828 AGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe 907 (1391)
T KOG0065|consen 828 AGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVE 907 (1391)
T ss_pred CchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000540 976 EVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1054 (1433)
Q Consensus 976 ~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p-~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~ 1054 (1433)
++++.+||++++|.+||.|| +|||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||
T Consensus 908 ~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCT 986 (1391)
T KOG0065|consen 908 EVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCT 986 (1391)
T ss_pred HHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 99999999999999999999 999999999999999999999 8999999999999999999999999999999999999
Q ss_pred ecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcccCCCCCCCccceeeecCccchhhccCCHHHHH
Q 000540 1055 IHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVEKIKDGYNPATWMLEVSAPSQEVALGVDFSDIY 1134 (1433)
Q Consensus 1055 ~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~ 1134 (1433)
+||||.++|+.||++++|++||++||+||+|++++++++||++++|++ |++..||||||||+++.+.+...+.||+++|
T Consensus 987 IHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w 1065 (1391)
T KOG0065|consen 987 IHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIW 1065 (1391)
T ss_pred ecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHH
Confidence 999999999999999999999999999999999999999999999885 6666699999999999988888889999999
Q ss_pred HhcHHHHHHHHHHHhhcCCCCC-CCCccccccCCccHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccC
Q 000540 1135 KRSELYRRNKSLIEDLSKPAPG-SKDLHFAAQYSQSAFTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDL 1213 (1433)
Q Consensus 1135 ~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~ 1213 (1433)
++|+++++++++++++++|+++ +.+..++++|++|+|.|++.|+||++++|||+|.|+++|++++++.||+||++||++
T Consensus 1066 ~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~ 1145 (1391)
T KOG0065|consen 1066 KNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKV 1145 (1391)
T ss_pred hccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeec
Confidence 9999999999999999999988 788889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000540 1214 GGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVSVERTVFYREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIV 1293 (1433)
Q Consensus 1214 ~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~ 1293 (1433)
|+ ++||++|.+|++|+++++.+..++..++|.+..||.++||||++||||+.+|++||+++|+||+++++++|.+|+
T Consensus 1146 g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~ 1222 (1391)
T KOG0065|consen 1146 GH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLIT 1222 (1391)
T ss_pred CC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheee
Confidence 84 689999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcH
Q 000540 1294 YAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANP 1373 (1433)
Q Consensus 1294 Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp 1373 (1433)
|+|+||.+++.+|+||++++++..+|++++|||+++++||.++|+++++++++++++||||++|++.||.||+||||+||
T Consensus 1223 Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP 1302 (1391)
T KOG0065|consen 1223 YYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSP 1302 (1391)
T ss_pred eeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCccccC----------CCCCHHHHHHHHHh----cccchhHHHHHHHhhcccc
Q 000540 1374 IAWTLYGLIASQFGDMEDKME----------SGETVKHFLEIISI----LNMIFWQQLRVSLLAFQGS 1427 (1433)
Q Consensus 1374 ~~y~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 1427 (1433)
++|.++|++..++||.+..|+ .|+||++|+++|++ +.++.....-|.+.+|+..
T Consensus 1303 ~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~ 1370 (1391)
T KOG0065|consen 1303 VTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVA 1370 (1391)
T ss_pred HHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehH
Confidence 999999999999999999994 36899999999999 8888777766666666654
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.3e-228 Score=2264.39 Aligned_cols=1404 Identities=61% Similarity=1.054 Sum_probs=1244.3
Q ss_pred ccccccCCCcccCC---C----CccchHHhhhHHHHhhCCChhhhhhcccccC-----CCC---ccccccCCCChHHHHH
Q 000540 19 SRWRTSSMGAFSRS---S----REEDDEEALKWAAIEKLPTYNRLKKGLLTTS-----RGE---AFEVDVSNLGPQERQR 83 (1433)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1433)
++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ .+|+|+++|+.++++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 44643 6888542 1 2578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHhcCCCCCcceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccc
Q 000540 84 LINKLVTVPEVDNEKFLLKLKNRIERVGIDLPKVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQ 163 (1433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1433)
++|+++++.++|+++++.++++|.+++|+++|+++|+|+||+|++++.++++.+||++|...+.++.+.+..+...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999988877665554445556
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCH
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1433)
+++||+|+||.++||++++|+||||||||||||+|+|+++++.+++|+|++||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 68899999999999999999999999999999999999988777899999999998877667889999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+|||.|+++|++.+.++++..+..+++++.++.|+.+++.+|++...++.+.+..++++|+.+||++|+||.||++++++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999998776666555566677777777888888889999888888888899999999999999999999999999
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+++++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred EEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcCCcc
Q 000540 404 VYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQTPFD 483 (1433)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1433)
+|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++.+.++++.|.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887777788888999999999999998888887777766
Q ss_pred ccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHHHHH
Q 000540 484 KSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGALFF 563 (1433)
Q Consensus 484 ~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~ 563 (1433)
+...++.....++|..++++|+++|++|++++++||+..+++|+++.+++|+++|++||+++.+..+..++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 65556666666789999999999999999999999999999999999999999999999987665555667788999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHHHHH
Q 000540 564 ATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQYFLL 643 (1433)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~l~l 643 (1433)
++++.++++++++..++.++|+|+|||+.+||++|+|++++++.++|+.++++++|++|+|||+|+++++++||.|++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCcccc
Q 000540 644 LAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHSWKK 723 (1433)
Q Consensus 644 ~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~ 723 (1433)
++.+++++++|++++++++++.+|+.+++++++++++++||++++++||+||+|++|+||++|+++++++|||.+.+|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred cC-CCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccc-cC-Cc
Q 000540 724 FT-PNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDST-IG-GT 800 (1433)
Q Consensus 724 ~~-~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 800 (1433)
.. .+.....|.++|..+++.....|+|++++++++|+++|++++++++++.++..+.......+......... .. ..
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 32 23345789999999999988899999999999999999999999999998766554443221111000000 00 00
Q ss_pred cccccCCC--CCC----cccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEE
Q 000540 801 VQLSTHGE--SGN----DIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVL 874 (1433)
Q Consensus 801 ~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~i 874 (1433)
........ ... ........... ...........++++.+|+.|..++|+||+|.++++...+..+..++++.+
T Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~i 895 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSNPEGLSKNRD-SSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQL 895 (1470)
T ss_pred cccccccccccccccccccccccccccc-cccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceE
Confidence 00000000 000 00000000000 000000112234556678889999999999999987665555555566789
Q ss_pred eeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHH
Q 000540 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 954 (1433)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 954 (1433)
|+|||++++||+++||+|||||||||||++|+|+.++|..+|+|.+||.+.++..+++.+|||+|+|.+++.+||+|+|.
T Consensus 896 L~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~ 975 (1470)
T PLN03140 896 LREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLI 975 (1470)
T ss_pred eeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHH
Confidence 99999999999999999999999999999999998777789999999988765556678999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000540 955 YSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1433)
Q Consensus 955 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~ 1034 (1433)
|++.++.+.+.+.+++++.++++++.++|.++.|+.+|.+++++|||||||||+||++|+.+|+||||||||+|||+.++
T Consensus 976 ~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a 1055 (1470)
T PLN03140 976 YSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1055 (1470)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Confidence 99988877666666777889999999999999999999888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcccCCCCCCCccce
Q 000540 1035 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVEKIKDGYNPATWM 1114 (1433)
Q Consensus 1035 ~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~ 1114 (1433)
..+++.|++++++|+||||++|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||
T Consensus 1056 ~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~ 1135 (1470)
T PLN03140 1056 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWM 1135 (1470)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhh
Confidence 99999999999889999999999997789999999999988999999999988899999999998888899999999999
Q ss_pred eeecCccchhhccCCHHHHHHhcHHHHHHHHHHHhhcCCCCCCCCccccccCCccHHHHHHHHHHHHHHHhhcChhHHHH
Q 000540 1115 LEVSAPSQEVALGVDFSDIYKRSELYRRNKSLIEDLSKPAPGSKDLHFAAQYSQSAFTQFLACLWKQHWSYWRNPAYTAV 1194 (1433)
Q Consensus 1115 l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~ 1194 (1433)
+|+++.+.+...+.||++.|++|++++++++.++++..+.++.++..++++|++|+++|+++|+||+++++||||.|+++
T Consensus 1136 l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~ 1215 (1470)
T PLN03140 1136 LEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLV 1215 (1470)
T ss_pred hhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHH
Confidence 99998766655667999999999999998888887777666666666678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHH
Q 000540 1195 RFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVSVERTVFYREKAAGMYSGIPWALAQ 1274 (1433)
Q Consensus 1195 r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~g~Y~~~~y~~a~ 1274 (1433)
|+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|++..||+||+|||++|+|++++|++|+
T Consensus 1216 r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~ 1295 (1470)
T PLN03140 1216 RFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQ 1295 (1470)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 99999999999999999999887778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhccc
Q 000540 1275 VMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGF 1354 (1433)
Q Consensus 1275 ~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf 1354 (1433)
+++|+||.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+.++++++++|++||||
T Consensus 1296 ~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf 1375 (1470)
T PLN03140 1296 VVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGF 1375 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCccccC-C----CCCHHHHHHHHHhcccchhHHHHHHHhhcc
Q 000540 1355 IIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDKME-S----GETVKHFLEIISILNMIFWQQLRVSLLAFQ 1425 (1433)
Q Consensus 1355 ~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1425 (1433)
++|+++||+||+|+||+||++|+++|+++|||+|.+..|. + ++||++|+.++||+++++.+.-.+.+++|=
T Consensus 1376 ~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~ 1451 (1470)
T PLN03140 1376 FIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFT 1451 (1470)
T ss_pred ccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHH
Confidence 9999999999999999999999999999999999988764 2 479999999999999998654455555543
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.5e-182 Score=1834.36 Aligned_cols=1259 Identities=32% Similarity=0.548 Sum_probs=1034.3
Q ss_pred CChHHHHHHHHHHHHhcCCCCC--cceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccccceeecce
Q 000540 94 VDNEKFLLKLKNRIERVGIDLP--KVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQHLTILKDV 171 (1433)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1433)
.|++++++.+.++.++.+...| +++|+|+||+|++ ...+...+||+.|...+.......... ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566676655554455555555 9999999999998 344566789999988776653332221 12334567899999
Q ss_pred eEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-CCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCCHHHHHH
Q 000540 172 SGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTVRETLA 248 (1433)
Q Consensus 172 s~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1433)
|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++++||+||+.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997421 124999999999875432 2356999999999999999999999
Q ss_pred HhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000540 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQ 328 (1433)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1433)
|+++++.+..+.... .+. +..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998776421110000 000 001223567899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 000540 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGP 408 (1433)
Q Consensus 329 kqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 408 (1433)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+++++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999998876678888889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcCCcccc---
Q 000540 409 RELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQTPFDKS--- 485 (1433)
Q Consensus 409 ~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 485 (1433)
++++.+||+++||+||++.++|||++++++++++ +++...+. ....+.+++++.|+.++.++++..+++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987543 22211111 123578899999999887766655543321110
Q ss_pred ------------ccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCcccc
Q 000540 486 ------------KSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTD 553 (1433)
Q Consensus 486 ------------~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~ 553 (1433)
+..+.......|..++|.|+++|++|+++.++||+..++.++++.+++|+++|++||+.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000112234568899999999999999999999999999999999999999999999765432 34
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCH
Q 000540 554 GGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNA 633 (1433)
Q Consensus 554 ~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~ 633 (1433)
.+.+.|++||++++.++.++.++..++.+|++|+|||..++|++++|++|+++.++|+.++.+++|++|+|||+|+++++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56778999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHH
Q 000540 634 GRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVA 713 (1433)
Q Consensus 634 ~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 713 (1433)
++||.+++++++...++++++++++++++++.+|+.+++++++++++++||++++++||+||+|++|+||++|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccC--C----------------------CcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 000540 714 NEFLGHSWKKFT--P----------------------NSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTL 769 (1433)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~ 769 (1433)
|||.+..+.|.. | +.....|.++|.. ++.....|.|.+++++++|+++|.++..+
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999888741 1 0113467888874 33445678999999999999999999999
Q ss_pred HHHhccccCCCcccccccccccccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeE
Q 000540 770 ALTFLNRLEKPRAILTEESESNEQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTF 849 (1433)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 849 (1433)
++++.++.......+..+........ +.....+......++...+..................+.......++|
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 762 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAK------KAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHW 762 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchh------hcccccccccccccccccCCCCccccccccccccccccccCCCceEEE
Confidence 99998754433222211110000000 000000000001111110000000000000000000000011235899
Q ss_pred eceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCccCccc
Q 000540 850 DEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYPKKQE 928 (1433)
Q Consensus 850 ~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~ 928 (1433)
+|++|.++.+ .+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+...
T Consensus 763 ~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~- 832 (1394)
T TIGR00956 763 RNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS- 832 (1394)
T ss_pred EeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-
Confidence 9999987532 23467999999999999999999999999999999999987644 456999999998753
Q ss_pred cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHH
Q 000540 929 TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLT 1008 (1433)
Q Consensus 929 ~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~ 1008 (1433)
.+++.+|||+|+|.+++.+||+|++.|++.++.+...+++++++.++++++.++|.++.|+.+|.++ .+|||||||||+
T Consensus 833 ~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqRl~ 911 (1394)
T TIGR00956 833 SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKRLT 911 (1394)
T ss_pred hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhHHH
Confidence 4677899999999999999999999999988877666667777889999999999999999998764 389999999999
Q ss_pred HHHHHhhCCC-eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcc
Q 000540 1009 IAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRH 1087 (1433)
Q Consensus 1009 iA~aL~~~p~-iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~ 1087 (1433)
||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.++.
T Consensus 912 Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~ 991 (1394)
T TIGR00956 912 IGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGEN 991 (1394)
T ss_pred HHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccc
Confidence 9999999997 999999999999999999999999998889999999999997678899999999998899999999988
Q ss_pred cchHHHHHhhCCCcccCCCCCCCccceeeecCccchhhccCCHHHHHHhcHHHHHHHHHHHhhcCCCCCCC---Cccccc
Q 000540 1088 SCHLVSYFEAIPGVEKIKDGYNPATWMLEVSAPSQEVALGVDFSDIYKRSELYRRNKSLIEDLSKPAPGSK---DLHFAA 1164 (1433)
Q Consensus 1088 ~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 1164 (1433)
++++++||+++ |.++||+++|||||+||+++.+.+.....||.+.|+.|++++...+.++++..+..... +....+
T Consensus 992 ~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1394)
T TIGR00956 992 SHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALS 1070 (1394)
T ss_pred cchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccccc
Confidence 88999999986 66689999999999999987654443456899999999998877666555433221111 111224
Q ss_pred cCCccHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhc
Q 000540 1165 QYSQSAFTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSS 1244 (1433)
Q Consensus 1165 ~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~ 1244 (1433)
+|+.|+++|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ ..
T Consensus 1071 ~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~ 1146 (1394)
T TIGR00956 1071 KYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQ 1146 (1394)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 689999999999999999999999999999999999999999999999986 47899999999999988877764 45
Q ss_pred ccchhhhhhhHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHH-------HHHHHHHHHHH
Q 000540 1245 VQPIVSVERTVF-YREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAK-------FFWYIFFMYVT 1316 (1433)
Q Consensus 1245 ~~~~~~~er~vf-~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~ 1316 (1433)
++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.+ ||+|++++++.
T Consensus 1147 ~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~ 1226 (1394)
T TIGR00956 1147 YLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMF 1226 (1394)
T ss_pred hhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHH
Confidence 567787888875 9999999999999999999999999999999999999999999988876 99999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCccccC--
Q 000540 1317 LLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDKME-- 1394 (1433)
Q Consensus 1317 ~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-- 1394 (1433)
.++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.
T Consensus 1227 ~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~ 1306 (1394)
T TIGR00956 1227 FLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVK 1306 (1394)
T ss_pred HHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998884
Q ss_pred --------CCCCHHHHHHHHHh
Q 000540 1395 --------SGETVKHFLEIISI 1408 (1433)
Q Consensus 1395 --------~~~~~~~~~~~~~~ 1408 (1433)
+|+||++|+.+|..
T Consensus 1307 e~~~f~pp~~~tC~~y~~~~~~ 1328 (1394)
T TIGR00956 1307 ELLTFNPPSGQTCGEYMKPYLE 1328 (1394)
T ss_pred ccceecCCCCCCHHHHHHHHHh
Confidence 37999998877664
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.3e-90 Score=873.87 Aligned_cols=566 Identities=25% Similarity=0.415 Sum_probs=468.6
Q ss_pred CCceeeEeceEeEeecccc----------------hhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhc
Q 000540 843 EPHSLTFDEVVYSVDMPQQ----------------MKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 906 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~----------------~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~ 906 (1433)
.+..+.|.|++|.++.... .+....+++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 3678999999999875421 011112334578999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000540 907 GRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL 986 (1433)
Q Consensus 907 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 986 (1433)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999886432 345689999999999999999999999887766555566667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhc
Q 000540 987 KQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1066 (1433)
Q Consensus 987 ~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~ 1066 (1433)
.|+.+|....++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999887788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred CEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcccCCCCCCCccceeeecCccchhh-----c----cCCHHHHHHhc
Q 000540 1067 DELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVEKIKDGYNPATWMLEVSAPSQEVA-----L----GVDFSDIYKRS 1137 (1433)
Q Consensus 1067 D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~~~~~-----~----~~~~~~~~~~s 1137 (1433)
|++++|++ |+++|.|+. +++++||++++ . +||+++|||||++|+++...+.. . ..+..+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999986 799999997 58999999995 3 69999999999999987532100 0 01123345321
Q ss_pred HHHHHHHHHHHh--hcC-CCC-----CCCCcc-ccccCCccHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 000540 1138 ELYRRNKSLIED--LSK-PAP-----GSKDLH-FAAQYSQSAFTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGS 1208 (1433)
Q Consensus 1138 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1208 (1433)
. .+...+.++. ... +.. ..+... ....+..+|++|+.+|++|++++ ||++.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 001000 11235578999999999999988 99999999999999999999999
Q ss_pred HhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000540 1209 IFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVSVERTVFYREKAAGMYSGIPWALAQVMIEIPYIFVQSLV 1288 (1433)
Q Consensus 1209 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~ 1288 (1433)
+||+++ ..+++++.|++|+++++.++.+++.+++.++.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999998888888888999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhh
Q 000540 1289 YSSIVYAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWY 1368 (1433)
Q Consensus 1289 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1368 (1433)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhcHHHHHHHHHHHHhhCCCcc-----ccCC-----CCCHHHHHHHHHhcccchhHHHHHHHhhcccc
Q 000540 1369 YWANPIAWTLYGLIASQFGDMED-----KMES-----GETVKHFLEIISILNMIFWQQLRVSLLAFQGS 1427 (1433)
Q Consensus 1369 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1427 (1433)
+|+||++|++++++.|||++.+. .|.. +..|. ++.+....+.+.|.++.+ |+++-+.
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~-~~~~~~~~~~~~~~~~~~-l~~~~~~ 645 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCK-FVEEDVAGQISPATSVSV-LIFMFVG 645 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCc-cchhhhhcccchHHHHHH-HHHHHHH
Confidence 99999999999999999987643 4531 12343 555555556778887554 3333333
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-90 Score=864.95 Aligned_cols=556 Identities=33% Similarity=0.588 Sum_probs=485.3
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEc
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVS 921 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 921 (1433)
.+..+.|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3467899999998764321 3468999999999999999999999999999999999998764 789999999
Q ss_pred CccCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 922 GYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 922 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
|++...+.+++.+|||.|+|.++|++||+|++.|+|.+|+|...+.++++++|+++++.+||.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98887788899999999999999999999999999999999988999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
||||||+||.+|+++|+||||||||||||+.++.+++++|++++++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 599999
Q ss_pred CCCCcccchHHHHHhhCCCcccCCCCCCCccceeeecCcc-chhhccCCHHHHHHh------cHHHHHHHH-HHHhhcCC
Q 000540 1082 GPLGRHSCHLVSYFEAIPGVEKIKDGYNPATWMLEVSAPS-QEVALGVDFSDIYKR------SELYRRNKS-LIEDLSKP 1153 (1433)
Q Consensus 1082 G~~~~~~~~~~~yf~~~~~~~~~~~~~npad~~l~v~~~~-~~~~~~~~~~~~~~~------s~~~~~~~~-~~~~~~~~ 1153 (1433)
|+. +++.+||+++ |. +||+++|||||.+|+.+.. ..... .+..+.++. .+...+... ..+.+..
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLST- 324 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhccc-
Confidence 997 6899999998 44 5999999999999988742 11000 011111111 110111100 0011111
Q ss_pred CCCCCCccccccCCccHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHH
Q 000540 1154 APGSKDLHFAAQYSQSAFTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTA 1233 (1433)
Q Consensus 1154 ~~~~~~~~~~~~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~ 1233 (1433)
.+. .+.....+||.|+..+++|.+++.+|+|.+...|.++.+++|+++|++||+++. +..+++++.|++|+.
T Consensus 325 ---~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 325 ---SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred ---ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 111 111127899999999999999999999999999999999999999999999975 456677999999999
Q ss_pred HHHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHH
Q 000540 1234 IMFLGIQYCSSVQPIVSVERTVFYREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFM 1313 (1433)
Q Consensus 1234 ~~~~~~~~~~~~~~~~~~er~vf~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~ 1313 (1433)
+.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCcccc
Q 000540 1314 YVTLLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDKM 1393 (1433)
Q Consensus 1314 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~ 1393 (1433)
++..+.++++|++++++.||...|+.+++++...+++|+||+++.++||+||+|++|+|+++|++||++.|||++....|
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~ 556 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRC 556 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999744444
Q ss_pred C------CCCCHHHHHHHHHhcccchhHHHHHHHhh
Q 000540 1394 E------SGETVKHFLEIISILNMIFWQQLRVSLLA 1423 (1433)
Q Consensus 1394 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1423 (1433)
. -..+..++++..-..+.++|.++.+++..
T Consensus 557 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~ 592 (613)
T KOG0061|consen 557 FLSGNLCCESTGEDVLKQLGFEDSSFWLDLLVLLAF 592 (613)
T ss_pred ccCcCCcccccHHHHHHhcCCcccccchhHHHHHHH
Confidence 2 12456788777766688899997776654
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.2e-88 Score=862.69 Aligned_cols=546 Identities=30% Similarity=0.486 Sum_probs=473.7
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCccCccccccceEEEeecCCCCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVT 948 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 948 (1433)
+++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986543 358999999998765566788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000540 949 VYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTs 1027 (1433)
|+||+.|++.++.+.+...+++++.++++++.+||.++.|+.+|.++ .++||||||||++||+||+.+|++|||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999887777777788889999999999999999999754 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcccCCCC
Q 000540 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVEKIKDG 1107 (1433)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~ 1107 (1433)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|.||. +++.+||++++ .+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCC
Confidence 99999999999999999888999999999998889999999999985 799999997 58899999984 369999
Q ss_pred CCCccceeeecCccchhh-----ccCCHHHHHHhcHHHHHHHHHHHhhcCCCC---CCCCccccccCCccHHHHHHHHHH
Q 000540 1108 YNPATWMLEVSAPSQEVA-----LGVDFSDIYKRSELYRRNKSLIEDLSKPAP---GSKDLHFAAQYSQSAFTQFLACLW 1179 (1433)
Q Consensus 1108 ~npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~ll~ 1179 (1433)
.|||||++|+++.+.+.. ...++.+.|++|+.+++..+.......+.+ ........++|..+++.|+..|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999986543211 112456677777766655443332111111 111111234678999999999999
Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhhhhhhHHHhh
Q 000540 1180 KQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVSVERTVFYRE 1259 (1433)
Q Consensus 1180 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE 1259 (1433)
|+++++||||.++.+|+++++++|+++|++||+++. ++++++++.|++|++++++++.++..+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999975 46789999999999999998888778888999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 000540 1260 KAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAITPNHHIAAI 1339 (1433)
Q Consensus 1260 ~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1339 (1433)
+++|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCcc-ccCC---CCCH---HHHHHHHHhcc-c
Q 000540 1340 VSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMED-KMES---GETV---KHFLEIISILN-M 1411 (1433)
Q Consensus 1340 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~---~~~~---~~~~~~~~~~~-~ 1411 (1433)
++++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. .|.+ +..| ++++.+.+|++ .
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~ 585 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999999999999999998774 5641 1224 35555567776 4
Q ss_pred chhHHHHHHHhhccc
Q 000540 1412 IFWQQLRVSLLAFQG 1426 (1433)
Q Consensus 1412 ~~~~~~~~~~~~~~~ 1426 (1433)
++|.++.+ |++|-+
T Consensus 586 ~~~~~~~i-l~~~~~ 599 (617)
T TIGR00955 586 DLYLDLIG-LVILIF 599 (617)
T ss_pred cHHHHHHH-HHHHHH
Confidence 56777554 444433
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.4e-86 Score=893.84 Aligned_cols=539 Identities=25% Similarity=0.439 Sum_probs=466.6
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--ceEEEEEEEcCccCcc--ccccceEEEeecCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNIKVSGYPKKQ--ETFARISGYCEQNDIHSP 945 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 945 (1433)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ ...+|+|.+||.+... ..+++.++|++|+|.++|
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 446799999999999999999999999999999999998532 2468999999987643 234566999999999999
Q ss_pred CCCHHHHHHHHHHhcCCC----CCCHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeE
Q 000540 946 FVTVYESLLYSAWLRLPP----EIDSETRKM-FIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1433)
Q Consensus 946 ~lTv~E~l~f~a~lr~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iL 1020 (1433)
.+||+|++.|++.++.+. ....+++++ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998887643 233444333 356789999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCC
Q 000540 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIP 1099 (1433)
Q Consensus 1021 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~ 1099 (1433)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+|+. .++.+||++++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999864 999999999998789999999999996 789999997 58999999994
Q ss_pred CcccCCCCCCCccceeeecCccchh----------hccCCHHHHHHhcHHHHHHHHHHHhhcCCC---------------
Q 000540 1100 GVEKIKDGYNPATWMLEVSAPSQEV----------ALGVDFSDIYKRSELYRRNKSLIEDLSKPA--------------- 1154 (1433)
Q Consensus 1100 ~~~~~~~~~npad~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1154 (1433)
. +||+++|||||++|+++++... ....+|++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4 6999999999999998764311 122479999999998877666554321110
Q ss_pred CCCCCccccccCCccHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHH
Q 000540 1155 PGSKDLHFAAQYSQSAFTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAI 1234 (1433)
Q Consensus 1155 ~~~~~~~~~~~~~~~~~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1234 (1433)
..++.....+.|..|+++|+++|++|+++++||||.++.+|+++.+++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122234688999999999999999999999999999999999999999999999985 4678999999999999
Q ss_pred HHHHHhhhhcccchhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHH
Q 000540 1235 MFLGIQYCSSVQPIVSVERTVFYREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFMY 1314 (1433)
Q Consensus 1235 ~~~~~~~~~~~~~~~~~er~vf~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1314 (1433)
+++++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 44567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCccccC
Q 000540 1315 VTLLFFTFYGMLTVAITPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDKME 1394 (1433)
Q Consensus 1315 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1394 (1433)
++.++++++++++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777663
Q ss_pred ---C-----------CC--------------CHHHHHHHHHhcc-cchhHHHHH
Q 000540 1395 ---S-----------GE--------------TVKHFLEIISILN-MIFWQQLRV 1419 (1433)
Q Consensus 1395 ---~-----------~~--------------~~~~~~~~~~~~~-~~~~~~~~~ 1419 (1433)
+ ++ +-.+|++..|+++ .+.|.++.+
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gi 674 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGI 674 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHH
Confidence 0 11 2258999766666 445666444
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.3e-85 Score=878.45 Aligned_cols=569 Identities=22% Similarity=0.372 Sum_probs=472.3
Q ss_pred CCCceeeEeceEeEeec-------ccc----------hh-hcc---ccCCceEEeeeeEEEEeCCcEEEEEccCCCChhH
Q 000540 842 FEPHSLTFDEVVYSVDM-------PQQ----------MK-LQG---VSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTT 900 (1433)
Q Consensus 842 ~~~~~i~~~~v~~~~~~-------~~~----------~~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKST 900 (1433)
.+...+.|+|+++.... |.. +. ..+ .++.++.+|+|||+.++|||+++|+|||||||||
T Consensus 127 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKST 206 (1470)
T PLN03140 127 LPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTT 206 (1470)
T ss_pred CCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHH
Confidence 34567999999887652 110 00 001 1123567999999999999999999999999999
Q ss_pred HHhhhcCCCCC-ceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH--
Q 000540 901 LMDVLAGRKTG-GYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------IDSETR-- 970 (1433)
Q Consensus 901 Ll~~L~g~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~-- 970 (1433)
||++|+|+.++ ...+|+|.+||.+......++.++||+|+|.|++.+||+|++.|++.++.+.. ...+++
T Consensus 207 LLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~ 286 (1470)
T PLN03140 207 LLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDA 286 (1470)
T ss_pred HHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhc
Confidence 99999998653 24689999999987544446779999999999999999999999988764211 111111
Q ss_pred ----------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 971 ----------------------KMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 971 ----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+|
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsG 366 (1470)
T PLN03140 287 GIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTG 366 (1470)
T ss_pred cCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcC
Confidence 1235789999999999999999888899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcccCCCC
Q 000540 1029 LDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVEKIKDG 1107 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~~~~~~ 1107 (1433)
||+.++..+++.|+++++ .|+|||+++|||+.+++++||+|++|++ |+++|+||. +++.+||++++ . +||++
T Consensus 367 LDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~~ 439 (1470)
T PLN03140 367 LDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPER 439 (1470)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCCC
Confidence 999999999999999976 4899999999998889999999999986 799999997 68999999994 4 69999
Q ss_pred CCCccceeeecCccch-h-----------hccCCHHHHHHhcHHHHHHHHHHHhhcCCCCCCCCccccccCCccHHHHHH
Q 000540 1108 YNPATWMLEVSAPSQE-V-----------ALGVDFSDIYKRSELYRRNKSLIEDLSKPAPGSKDLHFAAQYSQSAFTQFL 1175 (1433)
Q Consensus 1108 ~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~ 1175 (1433)
+|||||++|++++... . ....+|++.|++|+.+++..+.++.........+.....++|..|++.|++
T Consensus 440 ~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~ 519 (1470)
T PLN03140 440 KGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLK 519 (1470)
T ss_pred CChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHH
Confidence 9999999999886332 1 012368999999988876655443211111111111123468899999999
Q ss_pred HHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhhhhhhH
Q 000540 1176 ACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVSVERTV 1255 (1433)
Q Consensus 1176 ~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v 1255 (1433)
.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+..+|++|++++++++.++.. ++.+..||+|
T Consensus 520 ~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~v 598 (1470)
T PLN03140 520 ACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPV 598 (1470)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccch
Confidence 999999999999999999999999999999999999998654444566778999999998888776655 4677889999
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Q 000540 1256 FYREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAITPNHH 1335 (1433)
Q Consensus 1256 f~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~ 1335 (1433)
|+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+..
T Consensus 599 f~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~ 678 (1470)
T PLN03140 599 FYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMI 678 (1470)
T ss_pred hHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCccc---cC-CCC-CHHHHHHHHHhcc
Q 000540 1336 IAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDK---ME-SGE-TVKHFLEIISILN 1410 (1433)
Q Consensus 1336 ~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~ 1410 (1433)
+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|++.|||.+.... |. ... +-.+|| +.+++.
T Consensus 679 ~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~ 757 (1470)
T PLN03140 679 IANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVF 757 (1470)
T ss_pred HHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcC
Confidence 999999999999999999999999999999999999999999999999999765422 21 122 335566 566665
Q ss_pred c---chhHHHHH
Q 000540 1411 M---IFWQQLRV 1419 (1433)
Q Consensus 1411 ~---~~~~~~~~ 1419 (1433)
. .+|.++.+
T Consensus 758 ~~~~~~w~~~~i 769 (1470)
T PLN03140 758 TDKNWYWIGVGA 769 (1470)
T ss_pred ccccchhhhHHH
Confidence 2 23555433
No 9
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-79 Score=769.66 Aligned_cols=582 Identities=30% Similarity=0.503 Sum_probs=490.2
Q ss_pred CcceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccccceeecceeEEEeCCeEEEEEcCCCCcHHHH
Q 000540 115 PKVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTL 194 (1433)
Q Consensus 115 ~~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTL 194 (1433)
..++++|+|+++++... .+ ..+++|+||||+++|||++||+||+|||||||
T Consensus 22 ~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTL 72 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTTL 72 (613)
T ss_pred ccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHHH
Confidence 45789999999886531 11 34679999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcC
Q 000540 195 LLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAG 274 (1433)
Q Consensus 195 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1433)
|++|+|+.....+++|+|++||++.+....++.+|||.|+|.+++++||+|++.|+++++-+..
T Consensus 73 L~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~---------------- 136 (613)
T KOG0061|consen 73 LNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS---------------- 136 (613)
T ss_pred HHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC----------------
Confidence 9999999987667899999999887766667899999999999999999999999998875321
Q ss_pred CCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000540 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGL 354 (1433)
Q Consensus 275 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgL 354 (1433)
...++.+++++++++.|||.+|+||+||+...||+||||||||+||..|+.+|+|||||||||||
T Consensus 137 ---------------~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSGL 201 (613)
T KOG0061|consen 137 ---------------LSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSGL 201 (613)
T ss_pred ---------------CCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCCc
Confidence 11234567899999999999999999999989999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHH
Q 000540 355 DSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1433)
Q Consensus 355 Ds~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 434 (1433)
|+.++.++++.|+++++. |+|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+.
T Consensus 202 DS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l 280 (613)
T KOG0061|consen 202 DSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFLL 280 (613)
T ss_pred chhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHHH
Confidence 999999999999999986 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcChh--hhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHH
Q 000540 435 EVTSKK--DQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRE 512 (1433)
Q Consensus 435 ev~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~ 512 (1433)
++.+.+ .+..... .......+.++..+...+.......... + ..........++|.|+..+.+|.
T Consensus 281 ~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~s~~~q~~~L~~R~ 347 (613)
T KOG0061|consen 281 DLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLS----T-SKKVEIGTSPSWWTQFKILLKRS 347 (613)
T ss_pred HHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcc----c-ccccccccCCcHHHHHHHHHHHH
Confidence 987742 1110000 0000011111100000000000000000 0 00001111678999999999999
Q ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHhhc
Q 000540 513 LLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGALFFATVMVMFNGFS-EISMTIAKLPVFYKQRD 591 (1433)
Q Consensus 513 ~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~-~~~~~~~~~~vf~ker~ 591 (1433)
+..++|++..+..|.++.+.+++++|++||+.+.... ......|++|+.+....+..+. .++.+..++++|.||+.
T Consensus 348 ~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~ 424 (613)
T KOG0061|consen 348 LKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETS 424 (613)
T ss_pred hHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHh
Confidence 9999999999999999999999999999997743332 2335678888888888666655 68889999999999999
Q ss_pred CCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 000540 592 FRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFG 671 (1433)
Q Consensus 592 ~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~ 671 (1433)
++.|+.++|++++.+.++|+.++.+++|++++|||+|++++..+|+.+.++.++..+++.+++.+++++.++...|.+++
T Consensus 425 ~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~ 504 (613)
T KOG0061|consen 425 SGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLG 504 (613)
T ss_pred cCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCcccccCC--CcccchhhhhhcccCccccchhH
Q 000540 672 SFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHSWKKFTP--NSIESLGVQVLKSRGFFAHAYWF 749 (1433)
Q Consensus 672 ~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~L~~~~~~~~~~~~ 749 (1433)
+++++.+++++||+++.++||.||+|+.|+|+.+|++++++.|||.+....|... ..+...|.++++..++... ..
T Consensus 505 ~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 582 (613)
T KOG0061|consen 505 PVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--SF 582 (613)
T ss_pred HHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--cc
Confidence 9999999999999999999999999999999999999999999999744444332 3456778889988887654 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000540 750 WLGLGALFGFVLLFNLGFTLALTFLN 775 (1433)
Q Consensus 750 w~~~g~l~g~~l~f~~~~~~~l~~~~ 775 (1433)
|.++.+++++.++|.++.++++++..
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 68889999999999999999998754
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=4.1e-79 Score=775.56 Aligned_cols=569 Identities=27% Similarity=0.420 Sum_probs=479.3
Q ss_pred cccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCC
Q 000540 162 KQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1433)
+.++.+|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34567999999999999999999999999999999999998875456899999999886544567899999999999999
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc-
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM- 320 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~- 320 (1433)
||+|||.|+++++.+... ..++.+.+++++++.+||++++||.||+++
T Consensus 115 TV~e~l~f~~~~~~~~~~-------------------------------~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------------------------------TKKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------------------------------CHHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999877532110 011223467889999999999999999864
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
.++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .+.|+++++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999875 4788999999999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|+++|+|+++++.+||+++|++||++.+++||+.++++.....+. . .....+++.+.|+.++..++.......
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998765322110 0 011234555666655444433322221
Q ss_pred Cccccc---cccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccch
Q 000540 481 PFDKSK---SHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIY 557 (1433)
Q Consensus 481 ~~~~~~---~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~ 557 (1433)
...+.. ..........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00011123457788999999999999999999999999999999999999999999765432 334556
Q ss_pred hHHHHHHHHHHHHHHH-HHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHH
Q 000540 558 AGALFFATVMVMFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRF 636 (1433)
Q Consensus 558 ~g~lf~~~~~~~~~~~-~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~f 636 (1433)
.|++|+.++...+.++ ..+..+..++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889998888777754 456677789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhh
Q 000540 637 FKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEF 716 (1433)
Q Consensus 637 f~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 716 (1433)
|.+++++++...++.+++.++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCC---cccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000540 717 LGHSW-KKFTPN---SIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFL 774 (1433)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~ 774 (1433)
.+..+ .|...+ .+...|.+++..+|+... +.|.++++++++.++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 443211 133458899998888654 458899999999999999999999874
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.3e-78 Score=766.98 Aligned_cols=609 Identities=21% Similarity=0.342 Sum_probs=468.7
Q ss_pred CCcceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccccceeecceeEEEeCCeEEEEEcCCCCcHHH
Q 000540 114 LPKVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTT 193 (1433)
Q Consensus 114 ~~~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKST 193 (1433)
.+.++++|.|+++.+.......+... ....+.......+...+ ...+.+|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~-~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETRQ-IQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccccccccccc-CCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 35789999999998754210111100 01110000000011111 12457999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhc
Q 000540 194 LLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1433)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1433)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.....
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------------- 173 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------------- 173 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC--------------
Confidence 999999998874 3589999999987542 235699999999999999999999998765421100
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000540 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTG 353 (1433)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsg 353 (1433)
..++...+++++++.+||++++||.||++..++|||||||||+||++|+.+|++|+|||||+|
T Consensus 174 -----------------~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 174 -----------------TKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 001123457889999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHH
Q 000540 354 LDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1433)
Q Consensus 354 LDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1433)
||+.++.++++.|+++++ .++|+++++||+..+++++||+|++|++|+++|+|+++++.+||+++||+||.+.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999875 5778888888887789999999999999999999999999999999999999999999999
Q ss_pred HHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC---Cccccc-----c-ccccccccccCCcHHHH
Q 000540 434 QEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT---PFDKSK-----S-HRAALTTEVYGAGRREL 504 (1433)
Q Consensus 434 ~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~-~~~~~~~~~y~~~~~~~ 504 (1433)
.++++...+.......+.+ ...+.+.+.|++... ......... +....+ . .........+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 112233344432111 111111000 000000 0 00000112345689999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHHHHHHHHHHHH-HHHHHHHHHhhhh
Q 000540 505 LKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGALFFATVMVMF-NGFSEISMTIAKL 583 (1433)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~-~~~~~~~~~~~~~ 583 (1433)
+.++++|.++. +|++.....|+++.+++|+++|++||+.+ ..+.+...|++||.+++.++ ..+..+..+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23456678999998777554 5667888888999
Q ss_pred hHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000540 584 PVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQYFLLLAANQMASALFRLIAATGRN 663 (1433)
Q Consensus 584 ~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~ 663 (1433)
++|+|||..++|++++|++|+++.++|+.++.+++|++++|||+|+++++++||.+++++++...++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCcc-----cccCCCcccchhhhhhc
Q 000540 664 MVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHSW-----KKFTPNSIESLGVQVLK 738 (1433)
Q Consensus 664 ~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~L~ 738 (1433)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 34321110001111222
Q ss_pred ccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000540 739 SRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLN 775 (1433)
Q Consensus 739 ~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~ 775 (1433)
...+. ....|.++++|++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234678889999999999999999997643
No 12
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-77 Score=754.10 Aligned_cols=515 Identities=26% Similarity=0.464 Sum_probs=459.4
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCccCccccccceEEEeecCCCCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVT 948 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 948 (1433)
.+..+|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+....++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999965432 235799999999776544788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000540 949 VYESLLYSAWLRLPPE----IDSETRK-MFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLD 1023 (1433)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++++|++||+..++|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999988732 2222222 2577899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhhCCCcc
Q 000540 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEAIPGVE 1102 (1433)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~~~~~~ 1102 (1433)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |+++|+||. .++++||++++ .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 999999999999999999999864 899999999999999999999999997 799999998 48999999985 3
Q ss_pred cCCCCCCCccceeeecCccchh-----------hcc-CCHHHHHHhcHHHHHHHHHHHhhcCCCCCCCCccccccCCccH
Q 000540 1103 KIKDGYNPATWMLEVSAPSQEV-----------ALG-VDFSDIYKRSELYRRNKSLIEDLSKPAPGSKDLHFAAQYSQSA 1170 (1433)
Q Consensus 1103 ~~~~~~npad~~l~v~~~~~~~-----------~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1170 (1433)
+||++.++|||+.++++...+. ... .+|++.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999998832111 111 4799999999999887754433222222333344456899999
Q ss_pred HHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhccCCCCCccHHhHHHHHhHHHHHHHHHHHhhhhcccchhh
Q 000540 1171 FTQFLACLWKQHWSYWRNPAYTAVRFFFTTFIALLLGSIFWDLGGKTEKRQDLLNAMGSMFTAIMFLGIQYCSSVQPIVS 1250 (1433)
Q Consensus 1171 ~~Q~~~ll~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1250 (1433)
|.|++.|+.|.++.+.||..|+..++++.+++|+++|++|++... .+..+.+.+.|++||++++..+++...+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999972 5677899999999999999998887776 5566
Q ss_pred hhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000540 1251 VERTVFYREKAAGMYSGIPWALAQVMIEIPYIFVQSLVYSSIVYAMMEFDWTAAKFFWYIFFMYVTLLFFTFYGMLTVAI 1330 (1433)
Q Consensus 1251 ~er~vf~rE~~~g~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1330 (1433)
+.|+||+|||...+|++++|.++.+++++|+.++.+++|.+|+||++||.+++++||.|+++++++..|+++++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhhhhcHHHHHHHHHHHHhhCCCccccC
Q 000540 1331 TPNHHIAAIVSTLFYGIWNIFSGFIIPRPRIPVWWRWYYWANPIAWTLYGLIASQFGDMEDKME 1394 (1433)
Q Consensus 1331 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1394 (1433)
+|+...|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+-.|.
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~ 659 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCS 659 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999887774
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-75 Score=737.07 Aligned_cols=835 Identities=21% Similarity=0.260 Sum_probs=444.3
Q ss_pred HHHHHHHhhhcCCCCChHHHHHHHHHHHHhcCCCCCcceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccC
Q 000540 80 ERQRLINKLVTVPEVDNEKFLLKLKNRIERVGIDLPKVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILP 159 (1433)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (1433)
....+.|.+...+..|... ... .-.+-...+++|+|++.+ +|
T Consensus 320 aa~~I~~~i~~~~~i~~~~-~~~-------~~~~~~~g~ief~nV~Fs------------------------------YP 361 (1228)
T KOG0055|consen 320 AAYRIFETIDRKPSIDPYS-KGG-------RVLSSIKGEIEFRNVCFS------------------------------YP 361 (1228)
T ss_pred chHHHHHHhcCCCCCCccc-ccC-------CcccccccceEEEEEEec------------------------------CC
Confidence 4566677777766665432 100 011223456788886543 45
Q ss_pred CccccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC
Q 000540 160 SRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN 236 (1433)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1433)
+|+ +..||+|+|+.|++|+.+||+|||||||||++++|.++++|+ +|+|.++|.++++++. +.++|.|+|+|.
T Consensus 362 sRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePv 437 (1228)
T KOG0055|consen 362 SRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPV 437 (1228)
T ss_pred CCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechh
Confidence 554 567999999999999999999999999999999999999998 9999999999988765 468999999985
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
++..||+|||.|+..- ...+.+.++++... ..--+..|++.+||.|
T Consensus 438 -lF~~tI~eNI~~G~~d----at~~~i~~a~k~an-----------------------------a~~fi~~lp~g~~T~v 483 (1228)
T KOG0055|consen 438 -LFATTIRENIRYGKPD----ATREEIEEAAKAAN-----------------------------AHDFILKLPDGYDTLV 483 (1228)
T ss_pred -hhcccHHHHHhcCCCc----ccHHHHHHHHHHcc-----------------------------HHHHHHhhHHhhcccc
Confidence 5568999999998521 12233333332211 1112456888999999
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
|++++. |||||||||+|||||+.+|+||+||||||+||+.+...+.+.|.+.. .++|+++ +.|..+.+ +.+|+|+
T Consensus 484 ge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStI-rnaD~I~ 558 (1228)
T KOG0055|consen 484 GERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTI-RNADKIA 558 (1228)
T ss_pred cCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhh-hccCEEE
Confidence 998874 99999999999999999999999999999999999999999998753 4555555 55555555 5599999
Q ss_pred EEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHH--HHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccc----c
Q 000540 397 LLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL--QEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFH----V 470 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l--~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 470 (1433)
+|++|+||+.|+++|+++. ..-.++.. |+....++. ..+ .+.. .++.....+.+. .
T Consensus 559 v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~--~~~~-----~~~~~~s~~~s~~~~~~ 620 (1228)
T KOG0055|consen 559 VMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEE--EESL-----KEERSRSLKSSSSSPSL 620 (1228)
T ss_pred EEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-ccc--ccch-----hhhhhhccccccccccc
Confidence 9999999999999999862 11111211 222221110 000 0000 000000000000 0
Q ss_pred chh-hhhhh--cCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHH-------HHHHHHHHHHhh
Q 000540 471 GQK-ISDEL--QTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLI-------QIASVALVYMTL 540 (1433)
Q Consensus 471 ~~~-~~~~~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~-------~~~~~ali~g~~ 540 (1433)
... ..... ..+.+ ++.... ...+....+++..+ ...+.++...+.-.+ ...+.+.+++.+
T Consensus 621 ~~~~~~~~~~~~~~~~-e~~~~~-~~~~~~~~s~~~i~--------k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~ 690 (1228)
T KOG0055|consen 621 SRGSNRSNLLSVKPEG-EDPEEP-VSEEDEKVSFWRIF--------KLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQV 690 (1228)
T ss_pred cCCccccccccccccc-cccccc-cccccccccHHHHH--------HhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 000 00000 00000 000000 01111233344433 333344443333322 233334444333
Q ss_pred heecc-CCCCccccccchhHHHHHHHHHHHHHH--HHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHH
Q 000540 541 FFRTK-MHKDSVTDGGIYAGALFFATVMVMFNG--FSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVA 617 (1433)
Q Consensus 541 f~~~~-~~~~~~~~~~~~~g~lf~~~~~~~~~~--~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~ 617 (1433)
+--.. .+.+........+.++|..+....+.. +......+..-..-.|-|... -+.++..+..+++-
T Consensus 691 ~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~---------F~~ll~qd~~wFD~- 760 (1228)
T KOG0055|consen 691 LEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMM---------FRALLRQEVGWFDD- 760 (1228)
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHcCCCcccCC-
Confidence 21111 111111111222444444433222111 111111111000001111000 01122222222210
Q ss_pred HHHhhhhhhcccCCCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH------HHHHhhccc
Q 000540 618 VWVFLTYYVIGLDPNAGRFFKQYF-----LLLAANQMASALFRLIAATGRNMVVANTFGSFALLV------LFSLGGFVL 686 (1433)
Q Consensus 618 i~~~i~Y~~igl~~~~~~ff~~~l-----~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~------~~l~~Gf~i 686 (1433)
-..+ ++....+. +--++..-...+...++++.-.+.+|..+++-+.++ ++.++++..
T Consensus 761 -----------~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~ 828 (1228)
T KOG0055|consen 761 -----------PENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQ 828 (1228)
T ss_pred -----------Cccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011 22222111 000111111222233333333344444444433222 222222221
Q ss_pred cccchhhHHHHHHHHcH---HHHHHHHHHHHhhcCCcccc--cCCC-cccchhhhhhcccCccccchhHHHHHHHHHHHH
Q 000540 687 SREDIKKWWKWAYWCSP---LSYAQNAIVANEFLGHSWKK--FTPN-SIESLGVQVLKSRGFFAHAYWFWLGLGALFGFV 760 (1433)
Q Consensus 687 ~~~~ip~~~~W~~~isp---~~y~~~al~~nef~~~~~~~--~~~~-~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~ 760 (1433)
. +++.-.+. -.|...+.+++|-..+-.+. .+.. .....-.+.++...-.......|.+++.-+...
T Consensus 829 ~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs 900 (1228)
T KOG0055|consen 829 K--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQS 900 (1228)
T ss_pred H--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000 01111122222211110000 0000 000000000000000000111222322222222
Q ss_pred HHHHHHHHHHHHhccccCCCccccccccccc----cc-ccccCCccccccCCCCCCcccccccCCcccccccccCCCCCC
Q 000540 761 LLFNLGFTLALTFLNRLEKPRAILTEESESN----EQ-DSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKK 835 (1433)
Q Consensus 761 l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 835 (1433)
+.|. .+++++.|-..+-............. .. .........+.|+...+...+...... ....+..+....
T Consensus 901 ~~~~-~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i---~dr~~~i~~~~~ 976 (1228)
T KOG0055|consen 901 LLFF-VYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEI---LDRKPTIDPDST 976 (1228)
T ss_pred HHHH-HHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH---hcCCCCCCCCCC
Confidence 2221 11222222111111000000000000 00 000000000111111000000000000 000000000111
Q ss_pred CCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEE
Q 000540 836 RGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT 915 (1433)
Q Consensus 836 ~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~ 915 (1433)
.+...+.....|+|+||+++||.. +..+||+|+|+++++|+.+||+|||||||||.+.+|-+..+ +..
T Consensus 977 ~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~ 1044 (1228)
T KOG0055|consen 977 SGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDA 1044 (1228)
T ss_pred CCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 222234445679999999999864 45679999999999999999999999999999999987665 458
Q ss_pred EEEEEcCccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCcc
Q 000540 916 GNIKVSGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMEL-------VELKP 985 (1433)
Q Consensus 916 G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~-------l~L~~ 985 (1433)
|.|.|||.+++. ..+|+++|.|.|+|.++. -|++||+.|+. .+.+.++ +.++++. .+|.+
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ANaH~FI~sLP~ 1114 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKLANAHNFISSLPQ 1114 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHHhhhHHHHhcCcC
Confidence 999999998765 346788999999999874 79999999971 1133332 3344443 25666
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh
Q 000540 986 LKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1065 (1433)
Q Consensus 986 ~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~ 1065 (1433)
-.|+.+|..| .+||||||||++||||+++||+||||||.||.||+++.+.|+++|++.. .|+|.|+++|++| ..+.
T Consensus 1115 GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqn 1190 (1228)
T KOG0055|consen 1115 GYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQN 1190 (1228)
T ss_pred cccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhc
Confidence 7888999765 4799999999999999999999999999999999999999999999875 6999999999987 5688
Q ss_pred cCEEEEEecCcEEEEECCC
Q 000540 1066 FDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1066 ~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+|.|.|+++ |++++.|.-
T Consensus 1191 aD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1191 ADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred CCEEEEEEC-CEEEecccH
Confidence 999999996 799999974
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-73 Score=738.74 Aligned_cols=773 Identities=21% Similarity=0.275 Sum_probs=439.8
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
.+.|+|||++|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|++ |+.+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-WI~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-WIQNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-HhhCCcHH
Confidence 34799999999999999999999999999999999999876 99999999 599999976 67789999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
|||.||..+. .+||+.+.++|..++|.++.|++| .|.||++++ +|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CC
Confidence 9999998775 479999999999999999998888 499999988 59
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~-~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||+++|||++++++|++||+|.|++|+++..+|++ |++.+. ++++++.++| ..+..+.+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L---~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL---RGKTVILVTH-QLQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh---cCCEEEEEeC-chhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999995 775543 3445555666 5678899999999999999
Q ss_pred EEecCHHHHHH---HHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 404 VYQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 404 v~~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
+..|+++|+.+ .|+++ ...++.....+ ...++. ..+..... .+. +..+.. .. .++...
T Consensus 721 ~~~Gty~el~~~~~~~~~l-~~~~~~~~~~~-----~~~~~~-------~~~~~~~~-~~~-~~~~~~---~~-~~~~~~ 781 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAEL-AHEEESEQEEE-----ASEKDL-------ESGESSRE-SES-RSLESL---SS-EEEKSK 781 (1381)
T ss_pred ecccCHHHHHhcchhHHHH-hhccchhhccc-----cccccc-------cccccccc-hhh-hhhhhh---cc-cccccc
Confidence 99999999984 33332 00000000000 000000 00000000 000 000000 00 000000
Q ss_pred Cccccccccc-cccccccCCcH---HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCC------Cc
Q 000540 481 PFDKSKSHRA-ALTTEVYGAGR---RELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHK------DS 550 (1433)
Q Consensus 481 ~~~~~~~~~~-~~~~~~y~~~~---~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~------~~ 550 (1433)
..+..+.... ....+.-.+++ +.+++++..--... ..++.+-..+...++.-++.-||-..... +.
T Consensus 782 ~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~----~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~ 857 (1381)
T KOG0054|consen 782 DEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVL----LILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVST 857 (1381)
T ss_pred cccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCc
Confidence 0000000000 00001111111 22222211000000 00111112222223333344444222111 11
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccC
Q 000540 551 VTDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLD 630 (1433)
Q Consensus 551 ~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~ 630 (1433)
.....+|..+.+...+..++.++......+.....++.+ +-+.+.+.|++|+++
T Consensus 858 ~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~------------ml~~Ilrapm~FFdt-------------- 911 (1381)
T KOG0054|consen 858 SFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDK------------LLNSILRAPMSFFDT-------------- 911 (1381)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHhCcchhcCC--------------
Confidence 112233444444444444444444433333332223222 345567777777775
Q ss_pred CCHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHhhccccccchhhHHHH
Q 000540 631 PNAGRFFKQY---------FLLLAANQMASALFRLIAATG----RNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKW 697 (1433)
Q Consensus 631 ~~~~~ff~~~---------l~l~~~~~~~~~l~~~iaa~~----~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W 697 (1433)
.+.||.+.++ .+.+....+...+..+++.+. .++.......++.++..++-.-|.-..+++++.-
T Consensus 912 TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLe-- 989 (1381)
T KOG0054|consen 912 TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLE-- 989 (1381)
T ss_pred CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh--
Confidence 2455555544 111222222222222222221 1111111111111111111111111111111100
Q ss_pred HHHHcHHHHHHHHHHHHhhcCCcccccCCCcccchhhh------hhcccCcc--------ccchhHHHHHHHHHHHHHHH
Q 000540 698 AYWCSPLSYAQNAIVANEFLGHSWKKFTPNSIESLGVQ------VLKSRGFF--------AHAYWFWLGLGALFGFVLLF 763 (1433)
Q Consensus 698 ~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~------~L~~~~~~--------~~~~~~w~~~g~l~g~~l~f 763 (1433)
..--||+.-.+..-.. | ...+.+.|.+ .....+.. ....|+.+-+-.+-..++.+
T Consensus 990 sitRSPi~sh~~Etl~----G-------lsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~ 1058 (1381)
T KOG0054|consen 990 SITRSPIYSHFSETLQ----G-------LSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLI 1058 (1381)
T ss_pred hcccchHHHhHHHHhc----C-------cceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012343322221110 0 0001111110 00000000 11112221111111111111
Q ss_pred HHHHHHHHHhccccCCCcccccccccccccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCC-CCcccCC
Q 000540 764 NLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKK-RGMVLPF 842 (1433)
Q Consensus 764 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 842 (1433)
. .....+.. .....+..+....+++-+-.......++..++.+..+.+.+|..++...+.+ .+...+.. .+..+|
T Consensus 1059 ~-al~~vl~~-~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p~~~~~~~pp~~WP- 1134 (1381)
T KOG0054|consen 1059 A-ALFAVLLP-SGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSE-APLEIEESRPPPSWP- 1134 (1381)
T ss_pred H-HHHHHHcc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCC-CCCCCcCCCCCCCCC-
Confidence 1 11111111 0000011110000111110111112223333344444455555544433322 11111111 112222
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcC
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSG 922 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1433)
..+.|+|+|++.+|.. +-..||||||++|+|||++||+|++|||||||+++|.+...+ .+|+|.|||
T Consensus 1135 ~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~--~~G~I~IDg 1201 (1381)
T KOG0054|consen 1135 SKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP--AEGEILIDG 1201 (1381)
T ss_pred CCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc--cCCeEEEcC
Confidence 3467999999877642 234799999999999999999999999999999999997763 579999999
Q ss_pred ccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------C
Q 000540 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVG------L 993 (1433)
Q Consensus 923 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~ 993 (1433)
.++.+ ..+|++++.+||||.++. -|+|.|| |+..+..++.++++||..+|++...++.+ .
T Consensus 1202 vdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~ 1270 (1381)
T KOG0054|consen 1202 VDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVS 1270 (1381)
T ss_pred eecccccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceec
Confidence 99765 456788999999999875 4777776 45566667789999999999876544332 2
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+++.++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+..+ ++|||++.|+.+ ....+|||+||+
T Consensus 1271 egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld 1347 (1381)
T KOG0054|consen 1271 EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLD 1347 (1381)
T ss_pred CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEee
Confidence 35678999999999999999999999999999999999999999999999764 799999999987 344589999999
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++++|++
T Consensus 1348 ~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1348 A-GRVVEFDSP 1357 (1381)
T ss_pred C-CeEeecCCh
Confidence 7 789999987
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.9e-69 Score=725.66 Aligned_cols=224 Identities=27% Similarity=0.398 Sum_probs=191.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++..++. +++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4888999877631 125699999999999999999999999999999999998764 479999999886
Q ss_pred cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. ...++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2235679999999999999999999998776653 233444567889999999999888875 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++..+|||+++|++ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999987 67889999999996 78999998
Q ss_pred CCcccchHHHHHh
Q 000540 1084 LGRHSCHLVSYFE 1096 (1433)
Q Consensus 1084 ~~~~~~~~~~yf~ 1096 (1433)
. +++.+-|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 35554443
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.4e-68 Score=726.25 Aligned_cols=211 Identities=22% Similarity=0.293 Sum_probs=177.8
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..|+|+||+++|+. +..++|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 46999999998842 123699999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
+++ ..+|+.++||||++.++.. |++|||.+.. .. .++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4567889999999998865 9999996531 11 23457788888887543 34455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999885 4899999999986 4566999999997
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 799999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-67 Score=723.52 Aligned_cols=211 Identities=20% Similarity=0.266 Sum_probs=177.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..|+|+||+++|+. +.+++|+|||++|+|||++||+||||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 46999999999842 224699999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLK-------QSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1433)
+++ ..+++.++||||++.+++. |++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4567889999999998875 9999996421 122 34577888888876533 4445543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999985 4566999999996
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 789999985
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-65 Score=610.07 Aligned_cols=474 Identities=26% Similarity=0.331 Sum_probs=362.8
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-CCceeEEEECCeeCCCCCc-------cceEEEecCCC-
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1433)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.|+||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999886 4568999999997654432 26799999985
Q ss_pred -CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
.+-|-+||.+.|.-..+.++... ..+...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 45566888888875554432111 22344567889999999987654
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
+++++.|||||||||.||+||+.+|++|++||||++||..++.+|++.|+++.+ ..++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCe
Confidence 678999999999999999999999999999999999999999999999999875 5678888999999999999999
Q ss_pred EEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhh
Q 000540 395 IILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKI 474 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1433)
|+||.+|++|+.|+.++++.- |.+ ||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~h-------------------------pYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQH-------------------------PYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cCC-------------------------cccH-----------------HH
Confidence 999999999999999988641 111 1100 00
Q ss_pred hhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccc
Q 000540 475 SDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDG 554 (1433)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 554 (1433)
... .|. .... ..
T Consensus 255 l~a--~p~---------------------------------------------------------------~~~~---~~ 266 (539)
T COG1123 255 LAA--VPR---------------------------------------------------------------LGDE---KI 266 (539)
T ss_pred Hhh--CCC---------------------------------------------------------------cccc---cc
Confidence 000 000 0000 00
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHH
Q 000540 555 GIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAG 634 (1433)
Q Consensus 555 ~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~ 634 (1433)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHH
Q 000540 635 RFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVAN 714 (1433)
Q Consensus 635 ~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 714 (1433)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 000540 715 EFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQD 794 (1433)
Q Consensus 715 ef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 794 (1433)
.+.
T Consensus 267 -----~~~------------------------------------------------------------------------ 269 (539)
T COG1123 267 -----IRL------------------------------------------------------------------------ 269 (539)
T ss_pred -----ccc------------------------------------------------------------------------
Confidence 000
Q ss_pred cccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEE
Q 000540 795 STIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVL 874 (1433)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~i 874 (1433)
.. .. . .+ ...-++.+|++-.+..+..+. .-..+...+
T Consensus 270 ------------------~~------------~~-~---------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~A 306 (539)
T COG1123 270 ------------------PR------------RG-P---------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKA 306 (539)
T ss_pred ------------------cc------------cc-c---------cc-cCceeEeeeeeeeeccccccc--cccccceee
Confidence 00 00 0 00 001234444443333221110 000134579
Q ss_pred eeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC--c---cccccceEEEeecCC--CCCCCC
Q 000540 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK--K---QETFARISGYCEQND--IHSPFV 947 (1433)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~l 947 (1433)
++||||.+++||++||+|+||||||||.++|+|+..+ ..|.|.++|.+. + ....++.+-+++|++ .+.|.+
T Consensus 307 v~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~ 384 (539)
T COG1123 307 VDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRM 384 (539)
T ss_pred eeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccc
Confidence 9999999999999999999999999999999998764 479999999762 1 122345677777776 567999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000540 948 TVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1433)
Q Consensus 948 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPT 1026 (1433)
||++.+.-........ ...++++++.++++.++|.. ..++. +.+||||||||++|||||+.+|++|++||||
T Consensus 385 tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~ 457 (539)
T COG1123 385 TVGDILAEPLRIHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPV 457 (539)
T ss_pred cHHHHHHhHHhhhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCc
Confidence 9999998765444322 25566778999999999986 45555 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|.||+..+..|.++|+++.++ |.|.|++|||.. -+.+.||||.+|++ |+++..||.
T Consensus 458 SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 458 SALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred cccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999999999999765 999999999987 47788999999996 799999985
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.1e-65 Score=692.84 Aligned_cols=217 Identities=18% Similarity=0.278 Sum_probs=178.7
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc------------
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 912 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------------ 912 (1433)
..|+|+||+|+|+.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999998631 1246999999999999999999999999999999999976531
Q ss_pred ----------------------------------------eEEEEEEEcCccCcc---ccccceEEEeecCCCCCCCCCH
Q 000540 913 ----------------------------------------YITGNIKVSGYPKKQ---ETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 913 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
+.+|+|.+||.++++ ..+++.+|||+|++.++ ..|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 147999999998754 45678899999999887 5899
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-------LKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlL 1022 (1433)
+|||.|+. .+.+. +.++++++..++.+ -.|+.+|.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998852 12233 33667777766544 346777754 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCEEEEEecC---cE-EEEECCC
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GY-EIYVGPL 1084 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G---g~-~~y~G~~ 1084 (1433)
|||||+||+++++.|++.|+++. .+++|+|+++|+++ ..+.||+|++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 56789999999983 55 5578874
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.2e-65 Score=700.83 Aligned_cols=211 Identities=18% Similarity=0.208 Sum_probs=177.8
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEE
Confidence 469999999998531 23599999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
+++ ..+++.++||||++.+++. |++|||.... +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 3567889999999999875 9999995210 122 3447888888888653 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||+||||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 5899999999975 4667999999996
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 799999986
No 21
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.1e-63 Score=680.62 Aligned_cols=211 Identities=24% Similarity=0.263 Sum_probs=178.0
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..|+|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|..++ .+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 46999999998852 224599999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
+.. ..+++.+|||||++.++.. |++|||... .+.+ ++.++++++..++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4567889999999998864 999999531 1222 3458889999888654 35556543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 995 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~-p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 467999999999999999996 89999999999999999999999999875 4799999999975 567899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 799999985
No 22
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.2e-63 Score=676.06 Aligned_cols=210 Identities=19% Similarity=0.245 Sum_probs=177.6
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..|+|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999999852 23469999999999999999999999999999999999864 37999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
+.. ..+++.++||||++.+++. |++|||.... +..++.++++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 3467889999999999875 9999995311 1124458889999988653 3445554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346799999999999999999999999999999999999999999999875 4799999999975 5567999999987
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 788998875
No 23
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-63 Score=628.03 Aligned_cols=488 Identities=21% Similarity=0.235 Sum_probs=353.8
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCC----------CCC------c-cce
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMD----------EFV------P-ERT 227 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1433)
.++|+||||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... . .+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999987441 111 1 236
Q ss_pred EEEecCCC--CCCCCCCHHHHHHHhhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 000540 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1433)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1433)
++||+|++ .+++.+||+||+.++.+.. +.. ..+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999986 5778899999999976432 110 0112235677899
Q ss_pred HcCCcc---cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 000540 305 VLGLDV---CADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISL 381 (1433)
Q Consensus 305 ~lgL~~---~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i 381 (1433)
.+||++ ..+ +.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+. .+++|+++
T Consensus 152 ~~gL~~~~~~~~-----~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~-~g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILS-----RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKE-MSMGVIFI 225 (623)
T ss_pred HCCCCChhhHHh-----CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHh-cCCEEEEE
Confidence 999964 234 445679999999999999999999999999999999999999999999987653 35667889
Q ss_pred ecChhHHHhhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHH
Q 000540 382 LQPAPETYNLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEF 461 (1433)
Q Consensus 382 ~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1433)
+|+...+.++||+|++|++|++++.|+++++.+ .|.+....+++.
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~--------------------------- 270 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLA--------------------------- 270 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhh---------------------------
Confidence 999999999999999999999999998876521 000000000000
Q ss_pred HHHHhccccchhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhh
Q 000540 462 TEGFQSFHVGQKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLF 541 (1433)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f 541 (1433)
. . +
T Consensus 271 --~-------------~--~------------------------------------------------------------ 273 (623)
T PRK10261 271 --A-------------V--P------------------------------------------------------------ 273 (623)
T ss_pred --c-------------c--C------------------------------------------------------------
Confidence 0 0 0
Q ss_pred eeccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHh
Q 000540 542 FRTKMHKDSVTDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVF 621 (1433)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1433)
.... .. +
T Consensus 274 ---~~~~--~~-~------------------------------------------------------------------- 280 (623)
T PRK10261 274 ---QLGA--MK-G------------------------------------------------------------------- 280 (623)
T ss_pred ---cccc--cc-c-------------------------------------------------------------------
Confidence 0000 00 0
Q ss_pred hhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHH
Q 000540 622 LTYYVIGLDPNAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWC 701 (1433)
Q Consensus 622 i~Y~~igl~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~i 701 (1433)
T Consensus 281 -------------------------------------------------------------------------------- 280 (623)
T PRK10261 281 -------------------------------------------------------------------------------- 280 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHhhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 000540 702 SPLSYAQNAIVANEFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPR 781 (1433)
Q Consensus 702 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~ 781 (1433)
..... .. ....
T Consensus 281 -----------------~~~~~----~~------------------------------------------------~~~~ 291 (623)
T PRK10261 281 -----------------LDYPR----RF------------------------------------------------PLIS 291 (623)
T ss_pred -----------------ccCCc----cc------------------------------------------------cccc
Confidence 00000 00 0000
Q ss_pred ccccccccccccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccc
Q 000540 782 AILTEESESNEQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQ 861 (1433)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~ 861 (1433)
. . .. .. .. ... . . ..... ....++++|+++.++....
T Consensus 292 ~----~-~~----~~-~~-------------~~~-----------~--~-~~~~~------~~~~L~~~~l~~~y~~~~~ 328 (623)
T PRK10261 292 L----E-HP----AK-QE-------------PPI-----------E--Q-DTVVD------GEPILQVRNLVTRFPLRSG 328 (623)
T ss_pred c----c-cc----cc-cC-------------ccc-----------c--c-ccccC------CCceEEEeeeEEEEcCCCc
Confidence 0 0 00 00 00 000 0 0 00000 0113788888877642100
Q ss_pred hhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc------cccceEE
Q 000540 862 MKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE------TFARISG 935 (1433)
Q Consensus 862 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~g 935 (1433)
. ... ..+.+.+|+||||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++... .+++.++
T Consensus 329 ~-~~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~ 404 (623)
T PRK10261 329 L-LNR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQ 404 (623)
T ss_pred c-ccc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeE
Confidence 0 000 00124699999999999999999999999999999999998653 479999999865321 2345799
Q ss_pred EeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHH
Q 000540 936 YCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVE 1012 (1433)
Q Consensus 936 yv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~a 1012 (1433)
|++|++ .+++.+||.|++.+....+. .....+.++.+.++++.+||. +..++.+ ..|||||||||+||||
T Consensus 405 ~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAra 477 (623)
T PRK10261 405 FIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARA 477 (623)
T ss_pred EEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHH
Confidence 999997 57889999999987644321 112334456788999999996 4566653 5799999999999999
Q ss_pred HhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1013 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1013 L~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|+.+|++|||||||+|||+.++..++++|++++++ |.|||++|||++ .+.+.||++++|++ |++++.|+..
T Consensus 478 L~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 478 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999999999765 899999999987 57788999999987 6889999863
No 24
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-63 Score=619.08 Aligned_cols=459 Identities=21% Similarity=0.278 Sum_probs=347.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ ..+|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 35999999999999999999999999999999999999861 128999999998865432 3569999999888899
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++......+.. + ..+...+++++++.+||++..+..+
T Consensus 97 ~tv~e~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (506)
T PRK13549 97 LSVLENIFLGNEITPGGIM--------------------D-----------YDAMYLRAQKLLAQLKLDINPATPV---- 141 (506)
T ss_pred CcHHHHhhhcccccccCCc--------------------C-----------HHHHHHHHHHHHHHcCCCCCcccch----
Confidence 9999999987532100000 0 0011234677899999987776554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +.++++++|+..++.++||+|++|++
T Consensus 142 -~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 142 -GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 3 56777789999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|++++.|+.+++.. .+..
T Consensus 219 G~i~~~~~~~~~~~--------------------------------------------~~~~------------------ 236 (506)
T PRK13549 219 GRHIGTRPAAGMTE--------------------------------------------DDII------------------ 236 (506)
T ss_pred CEEeeecccccCCH--------------------------------------------HHHH------------------
Confidence 99998876442200 0000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
+. +. + ..
T Consensus 237 ------------------------------~~----------------------------~~--~--~~----------- 243 (506)
T PRK13549 237 ------------------------------TM----------------------------MV--G--RE----------- 243 (506)
T ss_pred ------------------------------HH----------------------------hh--C--cC-----------
Confidence 00 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
. . . .. +
T Consensus 244 --~--~-------------------~--------------------------~~-~------------------------ 249 (506)
T PRK13549 244 --L--T-------------------A--------------------------LY-P------------------------ 249 (506)
T ss_pred --c--c-------------------c--------------------------cc-c------------------------
Confidence 0 0 0 00 0
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
.. . . .. ....++++|+++.++. .+++.+|+|||+
T Consensus 250 ------------~~------------~--~--~~--------~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl 283 (506)
T PRK13549 250 ------------RE------------P--H--TI--------GEVILEVRNLTAWDPV----------NPHIKRVDDVSF 283 (506)
T ss_pred ------------cc------------c--c--CC--------CCceEEEecCcccccc----------ccccccccceee
Confidence 00 0 0 00 0012556666654320 012358999999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l 953 (1433)
+|++||+++|+||||||||||+++|+|..++ +.+|+|.++|.+.... ..++.+||++|++ .+++.+||.||+
T Consensus 284 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (506)
T PRK13549 284 SLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNI 362 (506)
T ss_pred EEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHh
Confidence 9999999999999999999999999997541 1379999999765321 1234689999985 467889999999
Q ss_pred HHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000540 954 LYSAWLRLPP--EIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1433)
Q Consensus 954 ~f~a~lr~~~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD 1030 (1433)
.+........ ..+....++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+|||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD 437 (506)
T PRK13549 363 TLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGID 437 (506)
T ss_pred hhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 8753211110 012233445688999999996 4666664 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..
T Consensus 438 ~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 490 (506)
T PRK13549 438 VGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINH 490 (506)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccc
Confidence 99999999999999888999999999986 57789999999997 6788888764
No 25
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-63 Score=619.65 Aligned_cols=458 Identities=21% Similarity=0.281 Sum_probs=346.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 35999999999999999999999999999999999999987 9999999998865432 2469999999888899
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++...... .+.. +.. ...+...+++++++.+||.+..++.+
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~--------------~~~-----------~~~~~~~~~~~~l~~~gl~~~~~~~~---- 143 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV--------------NII-----------DWREMRVRAAMMLLRVGLKVDLDEKV---- 143 (510)
T ss_pred CcHHHHhhhccccccc--cccc--------------ccc-----------CHHHHHHHHHHHHHHcCCCCCcccch----
Confidence 9999999875421000 0000 000 00112235677899999987777555
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|++++|+..++.++||+|++|++
T Consensus 144 -~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 144 -ANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 3 56677789999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|++++.|+++++.. . +..+.
T Consensus 221 G~i~~~g~~~~~~~----------------------------~----------------~~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN----------------------------D----------------DIVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH----------------------------H----------------HHHHH----------------
Confidence 99999887654310 0 00000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
+. + .. ..
T Consensus 241 ------------------------------------------------------------~~--~--~~-~~-------- 247 (510)
T PRK09700 241 ------------------------------------------------------------MV--G--RE-LQ-------- 247 (510)
T ss_pred ------------------------------------------------------------hc--C--CC-cc--------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
.. . ...
T Consensus 251 -~~-----------------------------------------------------~-~~~------------------- 256 (510)
T PRK09700 251 -NA-----------------------------------------------------M-KEN------------------- 256 (510)
T ss_pred -cc-----------------------------------------------------c-ccc-------------------
Confidence 00 0 000
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
. . . .. .+..++++|++..+ ..+|+|+|+
T Consensus 257 ------------~-------------~--~--~~--------~~~~l~~~~l~~~~---------------~~~l~~isl 284 (510)
T PRK09700 257 ------------V-------------S--N--LA--------HETVFEVRNVTSRD---------------RKKVRDISF 284 (510)
T ss_pred ------------c-------------c--c--CC--------CCcEEEEeCccccC---------------CCcccceeE
Confidence 0 0 0 00 00135666665321 137999999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecC---CCCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~lTv~E~l 953 (1433)
++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|+ ..+++.+||+|++
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (510)
T PRK09700 285 SVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNM 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHh
Confidence 9999999999999999999999999997653 479999999765321 224568999998 4578889999999
Q ss_pred HHHHHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000540 954 LYSAWLR---LPP--E-IDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1433)
Q Consensus 954 ~f~a~lr---~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPT 1026 (1433)
.+....+ ... . ......++.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+||||||||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt 437 (510)
T PRK09700 363 AISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPT 437 (510)
T ss_pred ccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 8753211 000 0 11222335578999999996 6677664 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1027 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+|||+.++..+++.|++++++|.|||++|||+. .+.+.||++++|++ |+++..++.
T Consensus 438 ~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 438 RGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999999999877999999999986 57789999999997 577887764
No 26
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.8e-63 Score=615.45 Aligned_cols=449 Identities=20% Similarity=0.309 Sum_probs=344.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 35999999999999999999999999999999999999988 9999999998754321 3469999999888999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.|+.......... + ..+.+.+++++++.+||++..+..+
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 139 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI-------------------D-----------WKKMYAEADKLLARLNLRFSSDKLV---- 139 (501)
T ss_pred CcHHHHhhhccccccccCcc-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCch----
Confidence 99999999864321000000 0 0011234677899999988777554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . ++++++++|+..++.++||+|++|++
T Consensus 140 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 140 -GELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998753 3 56677889999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|+++..|+.+++.. ++..+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHH----------------
Confidence 99998775432100 000000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
++ . ..
T Consensus 237 ------------------------------------------------------------~~--~--~~----------- 241 (501)
T PRK10762 237 ------------------------------------------------------------MV--G--RK----------- 241 (501)
T ss_pred ------------------------------------------------------------hc--C--CC-----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
.
T Consensus 242 --------------------------------------------------~----------------------------- 242 (501)
T PRK10762 242 --------------------------------------------------L----------------------------- 242 (501)
T ss_pred --------------------------------------------------c-----------------------------
Confidence 0
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
.. . .+
T Consensus 243 -~~----------------------------------------------------~--~~-------------------- 247 (501)
T PRK10762 243 -ED----------------------------------------------------Q--YP-------------------- 247 (501)
T ss_pred -cc----------------------------------------------------c--cc--------------------
Confidence 00 0 00
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
.. .. . + .+..++++|++. .+|+|+|+
T Consensus 248 ------------~~------------~~----~-------~-~~~~l~~~~l~~------------------~~l~~vsl 273 (501)
T PRK10762 248 ------------RL------------DK----A-------P-GEVRLKVDNLSG------------------PGVNDVSF 273 (501)
T ss_pred ------------cc------------cc----C-------C-CCcEEEEeCccc------------------CCcccceE
Confidence 00 00 0 0 001245555541 26999999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l 953 (1433)
++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.+||++|++ .+++.+||.|++
T Consensus 274 ~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 351 (501)
T PRK10762 274 TLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENM 351 (501)
T ss_pred EEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHh
Confidence 9999999999999999999999999998653 479999999775321 1245689999995 467889999999
Q ss_pred HHHHHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 954 LYSAWLRLP---PEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 954 ~f~a~lr~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
.+....... ......+.++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~L 426 (501)
T PRK10762 352 SLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGV 426 (501)
T ss_pred hhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCC
Confidence 875321100 0012233345688999999995 5667664 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|+.++..+.+.|++++++|.|||++||++. .+.+.||++++|++ |++++.|+..
T Consensus 427 D~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 480 (501)
T PRK10762 427 DVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTRE 480 (501)
T ss_pred CHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccc
Confidence 999999999999999878999999999987 57789999999986 6888888764
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.1e-62 Score=615.54 Aligned_cols=463 Identities=22% Similarity=0.293 Sum_probs=346.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCCCc-------cceEEEecCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|. ...+|+|.++|.++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999862 0138999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHhhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc-
Q 000540 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC- 311 (1433)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 311 (1433)
. +.+.+||+|++.+..... +.. ..+...+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 3 566789999988653211 110 01123456788999999752
Q ss_pred --ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHH
Q 000540 312 --ADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETY 389 (1433)
Q Consensus 312 --~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1433)
.+. .+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.+|++++|+...+.
T Consensus 148 ~~~~~-----~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTD-----YPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhh-----CCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 343 44579999999999999999999999999999999999999999999987643 3566777899999999
Q ss_pred hhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccc
Q 000540 390 NLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFH 469 (1433)
Q Consensus 390 ~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1433)
++||+|++|++|++++.|+++++.+. |.
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------------------------- 249 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------------------------- 249 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC--------------------------------------------
Confidence 99999999999999999987654210 00
Q ss_pred cchhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCC
Q 000540 470 VGQKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKD 549 (1433)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~ 549 (1433)
+. + . +.+ + .. .
T Consensus 250 ------------------~~-------~-------~-----~~~----------------------------~--~~--~ 260 (529)
T PRK15134 250 ------------------HP-------Y-------T-----QKL----------------------------L--NS--E 260 (529)
T ss_pred ------------------CH-------H-------H-----HHH----------------------------H--Hh--C
Confidence 00 0 0 000 0 00 0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhccc
Q 000540 550 SVTDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGL 629 (1433)
Q Consensus 550 ~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl 629 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHH
Q 000540 630 DPNAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQN 709 (1433)
Q Consensus 630 ~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 709 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccc
Q 000540 710 AIVANEFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESE 789 (1433)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~ 789 (1433)
+. . .+
T Consensus 261 ----------------~~-----~-----------------------------------------~~------------- 265 (529)
T PRK15134 261 ----------------PS-----G-----------------------------------------DP------------- 265 (529)
T ss_pred ----------------cc-----c-----------------------------------------cc-------------
Confidence 00 0 00
Q ss_pred ccccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccc-hhhcccc
Q 000540 790 SNEQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQ-MKLQGVS 868 (1433)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~-~~~~~~~ 868 (1433)
.. . ... .+..++++|+++.++.... .+ + .
T Consensus 266 -----------------------~~------------~------~~~------~~~~l~~~~l~~~~~~~~~~~~--~-~ 295 (529)
T PRK15134 266 -----------------------VP------------L------PEP------ASPLLDVEQLQVAFPIRKGILK--R-T 295 (529)
T ss_pred -----------------------cc------------c------CCC------CCCcccccCcEEEeecCccccc--c-c
Confidence 00 0 000 0002455666655531000 00 0 0
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc------cccceEEEeecCC-
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE------TFARISGYCEQND- 941 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~- 941 (1433)
.+.+.+|+|||+++++||+++|+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|++
T Consensus 296 ~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~ 372 (529)
T PRK15134 296 VDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPN 372 (529)
T ss_pred cccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCch
Confidence 012469999999999999999999999999999999999763 379999999765321 1245689999996
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCe
Q 000540 942 -IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1019 (1433)
Q Consensus 942 -~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~i 1019 (1433)
.+++.+||.|++.+....+.. .....+.++.+.++++.++|. +..++.+ ..|||||||||+||++|+.+|++
T Consensus 373 ~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~l 446 (529)
T PRK15134 373 SSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSL 446 (529)
T ss_pred hhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCE
Confidence 477889999999886543211 122334456688999999997 4566653 56999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1020 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1020 LlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|||||||+|||+.++..+++.|++++++ |+|||++||++. .+.+.||++++|++ |+++..|+.
T Consensus 447 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 447 IILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred EEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 9999999999999999999999999865 899999999986 57788999999997 688888875
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.3e-62 Score=610.13 Aligned_cols=453 Identities=19% Similarity=0.241 Sum_probs=342.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999988 9999999998765432 2469999999889999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.|+.... + +...+++++++.+||++..+..+
T Consensus 101 ~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~---- 138 (510)
T PRK15439 101 LSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSA---- 138 (510)
T ss_pred CcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCCh----
Confidence 99999998853100 0 01123567889999987777554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +.+|++++|+..++.++||+|++|++
T Consensus 139 -~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 139 -GSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred -hhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 3 56778889999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|++++.|+++++... + ..+.+.
T Consensus 216 G~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~-------------- 237 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------D-----------------------------IIQAIT-------------- 237 (510)
T ss_pred CEEEEecChHHcCHH---------------H-----------------------------HHHHHh--------------
Confidence 999999987654210 0 000000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
...... ..
T Consensus 238 ----------------------------------------------------------------~~~~~~--~~------ 245 (510)
T PRK15439 238 ----------------------------------------------------------------PAAREK--SL------ 245 (510)
T ss_pred ----------------------------------------------------------------Cccccc--cc------
Confidence 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 246 -------------------------------------------------------------------------------- 245 (510)
T PRK15439 246 -------------------------------------------------------------------------------- 245 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
.. .. .
T Consensus 246 ----------------------------------------------~~--~~---------------------------~ 250 (510)
T PRK15439 246 ----------------------------------------------SA--SQ---------------------------K 250 (510)
T ss_pred ----------------------------------------------cc--cc---------------------------c
Confidence 00 00 0
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
.. ..+ +
T Consensus 251 ~~-----------------~~~---------------------------------~------------------------ 256 (510)
T PRK15439 251 LW-----------------LEL---------------------------------P------------------------ 256 (510)
T ss_pred cc-----------------ccc---------------------------------c------------------------
Confidence 00 000 0
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
.. .. . ... .+.-++++|++. .+|+|||+
T Consensus 257 ------------~~------------~~-~-~~~--------~~~~l~~~~l~~------------------~~l~~isl 284 (510)
T PRK15439 257 ------------GN------------RR-Q-QAA--------GAPVLTVEDLTG------------------EGFRNISL 284 (510)
T ss_pred ------------cc------------cc-c-cCC--------CCceEEEeCCCC------------------CCccceeE
Confidence 00 00 0 000 011255566541 15899999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~l 953 (1433)
++++|+++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l 362 (510)
T PRK15439 285 EVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNV 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHH
Confidence 9999999999999999999999999997653 379999999865321 1234689999984 477889999998
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHH
Q 000540 954 LYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1433)
Q Consensus 954 ~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~ 1032 (1433)
......+..........++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~ 437 (510)
T PRK15439 363 CALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVS 437 (510)
T ss_pred HhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChh
Confidence 6421111111011222345678999999997 6667664 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1033 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1033 ~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
+++.+++.|++++++|.|||++||++. .+.+.||++++|++ |++++.|..+
T Consensus 438 ~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 438 ARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999999999878999999999987 57889999999986 6888877654
No 29
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.4e-62 Score=610.36 Aligned_cols=445 Identities=23% Similarity=0.322 Sum_probs=341.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEECC-----------------------eeC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNG-----------------------HNM 219 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~ 219 (1433)
+.+|+|+|+++.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999996 576 89999972 221
Q ss_pred C-------CC------CccceEEEecCC-CCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHH
Q 000540 220 D-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYM 285 (1433)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 285 (1433)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~---------------------------- 141 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE---------------------------- 141 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------------------------
Confidence 1 00 013469999997 57788899999999865432210
Q ss_pred HHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHH
Q 000540 286 KAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1433)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~ 365 (1433)
..+...+++++++.+||++..+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.
T Consensus 142 ------~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 142 ------GKEAVGRAVDLIEMVQLSHRITHI-----ARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred ------HHHHHHHHHHHHHHcCChhhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 001223467789999998766644 457999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhh
Q 000540 366 FKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQY 445 (1433)
Q Consensus 366 l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~ 445 (1433)
|+++++.. +.+|++++|+...+.++||+|++|++|++++.|+++++.+.+..
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 99876533 56678889999999999999999999999988766543110000
Q ss_pred hhccCCCCccCCHHHHHHHHhccccchhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHH
Q 000540 446 WVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIF 525 (1433)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~ 525 (1433)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhheeccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHH
Q 000540 526 KLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSW 605 (1433)
Q Consensus 526 ~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~ 605 (1433)
... .
T Consensus 263 -------------------~~~-~-------------------------------------------------------- 266 (520)
T TIGR03269 263 -------------------GVS-E-------------------------------------------------------- 266 (520)
T ss_pred -------------------hch-h--------------------------------------------------------
Confidence 000 0
Q ss_pred HHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhcc
Q 000540 606 ILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFV 685 (1433)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~ 685 (1433)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHH
Q 000540 686 LSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNL 765 (1433)
Q Consensus 686 i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~ 765 (1433)
+
T Consensus 267 -----~-------------------------------------------------------------------------- 267 (520)
T TIGR03269 267 -----V-------------------------------------------------------------------------- 267 (520)
T ss_pred -----h--------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHhccccCCCcccccccccccccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCc
Q 000540 766 GFTLALTFLNRLEKPRAILTEESESNEQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPH 845 (1433)
Q Consensus 766 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1433)
.+.. . . . . ...
T Consensus 268 ------------~~~~-----------------~-------------~-------------~------~--------~~~ 278 (520)
T TIGR03269 268 ------------EKEC-----------------E-------------V-------------E------V--------GEP 278 (520)
T ss_pred ------------cccc-----------------c-------------c-------------C------C--------CCc
Confidence 0000 0 0 0 0 001
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEc-Ccc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVS-GYP 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~ 924 (1433)
.++++|+++.++.. ..+.+.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++ |.+
T Consensus 279 ~l~~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~ 348 (520)
T TIGR03269 279 IIKVRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDE 348 (520)
T ss_pred eEEEeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCc
Confidence 25677777665310 01224699999999999999999999999999999999998653 47999996 532
Q ss_pred ---Ccc------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----ccccc
Q 000540 925 ---KKQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-----LKQSL 990 (1433)
Q Consensus 925 ---~~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~ 990 (1433)
... ...++.+||++|++.+++.+||.|++.+...+. ......++.+.++++.++|.+ ..++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 424 (520)
T TIGR03269 349 WVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY 424 (520)
T ss_pred cccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC
Confidence 111 112456899999988889999999998754321 122333456788999999975 34554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1069 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v 1069 (1433)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+++.|++++++ |.|||++||++. .+.+.||++
T Consensus 425 -----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i 498 (520)
T TIGR03269 425 -----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRA 498 (520)
T ss_pred -----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEE
Confidence 3579999999999999999999999999999999999999999999999764 899999999987 577889999
Q ss_pred EEEecCcEEEEECCC
Q 000540 1070 FLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1070 ~~L~~Gg~~~y~G~~ 1084 (1433)
++|++ |+++..|+.
T Consensus 499 ~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 499 ALMRD-GKIVKIGDP 512 (520)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 678888874
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1e-61 Score=606.19 Aligned_cols=460 Identities=19% Similarity=0.263 Sum_probs=343.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 35999999999999999999999999999999999998761 128999999998865432 2469999999888999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++......+... ...+...+++.+++.+||.+..+ +..
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~l~~~~l~~~~~----~~~ 138 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRM------------------------------AYNAMYLRAKNLLRELQLDADNV----TRP 138 (500)
T ss_pred CcHHHHHHhhcccccccccc------------------------------CHHHHHHHHHHHHHHcCCCCCcc----cCc
Confidence 99999998864321000000 00011234677899999976542 123
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. . +++|++++|+..++.++||+|++|++
T Consensus 139 ~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~~ 216 (500)
T TIGR02633 139 VGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIRD 216 (500)
T ss_pred hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEeC
Confidence 457999999999999999999999999999999999999999999998753 3 56778889999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|++++.|+.+++.. ...
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~------------------- 233 (500)
T TIGR02633 217 GQHVATKDMSTMSE--------------------------------------------DDI------------------- 233 (500)
T ss_pred CeEeeecCcccCCH--------------------------------------------HHH-------------------
Confidence 99987654321000 000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
. .. +. + ..
T Consensus 234 ------------------------~-----~~----------------------------~~--~--~~----------- 241 (500)
T TIGR02633 234 ------------------------I-----TM----------------------------MV--G--RE----------- 241 (500)
T ss_pred ------------------------H-----HH----------------------------Hh--C--cc-----------
Confidence 0 00 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
.+
T Consensus 242 --------------------------------------------------~~---------------------------- 243 (500)
T TIGR02633 242 --------------------------------------------------IT---------------------------- 243 (500)
T ss_pred --------------------------------------------------cc----------------------------
Confidence 00
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
. . . +
T Consensus 244 --~------------------~-------------------------------~-~------------------------ 247 (500)
T TIGR02633 244 --S------------------L-------------------------------Y-P------------------------ 247 (500)
T ss_pred --c------------------c-------------------------------c-c------------------------
Confidence 0 0 0 0
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
.. .. +. .+..++++|+++.+.. .+++.+|+|+|+
T Consensus 248 ------------~~------------~~----~~--------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~ 281 (500)
T TIGR02633 248 ------------HE------------PH----EI--------GDVILEARNLTCWDVI----------NPHRKRVDDVSF 281 (500)
T ss_pred ------------cc------------cc----CC--------CCceEEEeCCcccccc----------ccccccccccee
Confidence 00 00 00 0012556666544310 012358999999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc----ccccceEEEeecCC---CCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l 953 (1433)
++++||+++|+|||||||||||++|+|..++ ..+|+|.++|.+... ...++.+||++|+. .+++.+||+|++
T Consensus 282 ~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~ 360 (500)
T TIGR02633 282 SLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNI 360 (500)
T ss_pred EEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHh
Confidence 9999999999999999999999999998642 137999999987532 12345689999995 578899999999
Q ss_pred HHHHH--hcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000540 954 LYSAW--LRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1433)
Q Consensus 954 ~f~a~--lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD 1030 (1433)
.+... ............++.++++++.+++.+ ..++.+ ..||||||||++||++|+.+|++|||||||+|||
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD 435 (500)
T TIGR02633 361 TLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVD 435 (500)
T ss_pred cchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 87532 110001122334456889999999964 456654 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++.
T Consensus 436 ~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 436 VGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred HhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 99999999999999888999999999987 57789999999987 577776654
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-61 Score=604.84 Aligned_cols=451 Identities=21% Similarity=0.303 Sum_probs=341.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999987 9999999998754321 3579999999888899
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++......+. . + ..+...+++.+++.+||++..+..
T Consensus 94 ~tv~~~l~~~~~~~~~~~----~----------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~----- 137 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI----V----------------N-----------RRLLNYEAREQLEHLGVDIDPDTP----- 137 (501)
T ss_pred CCHHHHHHhcccccccCC----C----------------C-----------HHHHHHHHHHHHHHcCCCCCcCCc-----
Confidence 999999998632100000 0 0 001123466789999998666644
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.++||+|++|++
T Consensus 138 ~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 138 LKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 446999999999999999999999999999999999999999999998753 3 56777889999999999999999999
Q ss_pred CeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhcC
Q 000540 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQT 480 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1433)
|+++..++..+. .+.++.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~------------------- 233 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQL------------------- 233 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHH-------------------
Confidence 999854421000 000000
Q ss_pred CccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhHH
Q 000540 481 PFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1433)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1433)
. .. +. . .. .
T Consensus 234 ------------------------~-----~~----------------------------~~--~--~~-~--------- 242 (501)
T PRK11288 234 ------------------------V-----QA----------------------------MV--G--RE-I--------- 242 (501)
T ss_pred ------------------------H-----HH----------------------------hc--C--CC-c---------
Confidence 0 00 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHHH
Q 000540 561 LFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQY 640 (1433)
Q Consensus 561 lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~~ 640 (1433)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000540 641 FLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGHS 720 (1433)
Q Consensus 641 l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 720 (1433)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCCc
Q 000540 721 WKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGGT 800 (1433)
Q Consensus 721 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1433)
.. . ..
T Consensus 243 -~~----------------------~----------------------------~~------------------------ 247 (501)
T PRK11288 243 -GD----------------------I----------------------------YG------------------------ 247 (501)
T ss_pred -cc----------------------c----------------------------cc------------------------
Confidence 00 0 00
Q ss_pred cccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEE
Q 000540 801 VQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSG 880 (1433)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1433)
.. .. . ..+..++++|+++ ..+++|+|+
T Consensus 248 ------------~~------------~~----~--------~~~~~l~~~~~~~-----------------~~~l~~isl 274 (501)
T PRK11288 248 ------------YR------------PR----P--------LGEVRLRLDGLKG-----------------PGLREPISF 274 (501)
T ss_pred ------------cc------------cc----C--------CCCcEEEEecccc-----------------CCcccceeE
Confidence 00 00 0 0011355566542 137999999
Q ss_pred EEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc----ccccceEEEeecCC---CCCCCCCHHHHH
Q 000540 881 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESL 953 (1433)
Q Consensus 881 ~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~E~l 953 (1433)
++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++
T Consensus 275 ~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l 352 (501)
T PRK11288 275 SVRAGEIVGLFGLVGAGRSELMKLLYGATRR--TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNI 352 (501)
T ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHcCCCcC--CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHh
Confidence 9999999999999999999999999997653 47999999976532 11235689999986 478889999999
Q ss_pred HHHHHhcC-CCC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 954 LYSAWLRL-PPE--IDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 954 ~f~a~lr~-~~~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
.+...... +.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+||
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~L 427 (501)
T PRK11288 353 NISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGI 427 (501)
T ss_pred ccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCC
Confidence 87532111 000 11223345678999999994 5667664 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCc
Q 000540 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGR 1086 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~ 1086 (1433)
|+.++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |++++.|..+.
T Consensus 428 D~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 428 DVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred CHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 999999999999999888999999999987 57889999999986 67888887753
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-60 Score=594.32 Aligned_cols=449 Identities=18% Similarity=0.275 Sum_probs=339.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 45999999999999999999999999999999999999988 9999999998754322 3569999999888899
Q ss_pred CCHHHHHHHhhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
+||+||+.++.. ..+.... ..+....++.+++.+|+++..++.+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------------------------------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC--------------------------------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987532 1110000 0011234677889999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.+..++.+.|+++.. . +.++++++|+..++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998753 3 5667778999999999999999999
Q ss_pred CCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhc
Q 000540 400 NGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQ 479 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1433)
+|+++..|+++++.. .+..+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 228 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIA---------------- 228 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHH----------------
Confidence 999998776542100 00000
Q ss_pred CCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhH
Q 000540 480 TPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAG 559 (1433)
Q Consensus 480 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g 559 (1433)
. + . + ..
T Consensus 229 --------------------------------~---~-------------------------~--~--~~---------- 234 (491)
T PRK10982 229 --------------------------------M---M-------------------------V--G--RS---------- 234 (491)
T ss_pred --------------------------------H---H-------------------------h--C--CC----------
Confidence 0 0 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHH
Q 000540 560 ALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQ 639 (1433)
Q Consensus 560 ~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~ 639 (1433)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000540 640 YFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGH 719 (1433)
Q Consensus 640 ~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1433)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCC
Q 000540 720 SWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGG 799 (1433)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1433)
. ... +
T Consensus 236 ---~---------------------------------------------------~~~--~------------------- 240 (491)
T PRK10982 236 ---T---------------------------------------------------QRF--P------------------- 240 (491)
T ss_pred ---c---------------------------------------------------ccc--c-------------------
Confidence 0 000 0
Q ss_pred ccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeE
Q 000540 800 TVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVS 879 (1433)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1433)
.. .. . + .+..++++|+++.. +.+|+|||
T Consensus 241 -------------~~------------~~----~-------~-~~~~i~~~~l~~~~---------------~~~l~~vs 268 (491)
T PRK10982 241 -------------DK------------EN----K-------P-GEVILEVRNLTSLR---------------QPSIRDVS 268 (491)
T ss_pred -------------cc------------cC----C-------C-CCcEEEEeCccccc---------------Ccccceee
Confidence 00 00 0 0 01136667776531 24899999
Q ss_pred EEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCCCCHHHH
Q 000540 880 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPFVTVYES 952 (1433)
Q Consensus 880 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E~ 952 (1433)
+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+. .+++.+|+.++
T Consensus 269 l~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 346 (491)
T PRK10982 269 FDLHKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFN 346 (491)
T ss_pred EEEeCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHh
Confidence 99999999999999999999999999997653 479999999775421 1234589999985 35788888877
Q ss_pred HHHHHH--hcCCCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 953 LLYSAW--LRLPPE-IDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 953 l~f~a~--lr~~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
..+... ...... ......++.+.++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~g 421 (491)
T PRK10982 347 SLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRG 421 (491)
T ss_pred eehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 433210 000001 12223345678899999985 4456553 56999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |+++..++.
T Consensus 422 LD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 422 IDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred cChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 9999999999999999888999999999987 57789999999987 677766654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.3e-59 Score=585.68 Aligned_cols=446 Identities=19% Similarity=0.250 Sum_probs=328.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCC--C--
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNH--I-- 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 238 (1433)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4899999999999999999999999999999999999987 9999999977643221 2458999997532 1
Q ss_pred ----CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 239 ----GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 239 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
..+||+|++.++. +...+++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1457777664310 011235677899999877765
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.+ ..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ . +.++++++|+...+.+.||+
T Consensus 132 ~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RF-----KYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCCE
Confidence 54 46999999999999999999999999999999999999999999998754 3 55677788999999999999
Q ss_pred EEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhh
Q 000540 395 IILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKI 474 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1433)
|++|++|+++..|+++++.+- +.+..
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~--------------------------------------- 230 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQ--------------------------------------- 230 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhh---------------------------------------
Confidence 999999999998887654210 00000
Q ss_pred hhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccc
Q 000540 475 SDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDG 554 (1433)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~ 554 (1433)
. ..+ + ....
T Consensus 231 ---~------------------------------~~~------~--------------------------~~~~------ 239 (490)
T PRK10938 231 ---L------------------------------AHS------E--------------------------QLEG------ 239 (490)
T ss_pred ---h------------------------------hhh------h--------------------------ccCc------
Confidence 0 000 0 0000
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHH
Q 000540 555 GIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAG 634 (1433)
Q Consensus 555 ~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~ 634 (1433)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHH
Q 000540 635 RFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVAN 714 (1433)
Q Consensus 635 ~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 714 (1433)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 000540 715 EFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQD 794 (1433)
Q Consensus 715 ef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 794 (1433)
. .. +. . . +
T Consensus 240 ----~--~~--~~----------------------------------------------------~---------~-~-- 247 (490)
T PRK10938 240 ----V--QL--PE----------------------------------------------------P---------D-E-- 247 (490)
T ss_pred ----c--cc--Cc----------------------------------------------------c---------c-c--
Confidence 0 00 00 0 0 0
Q ss_pred cccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEE
Q 000540 795 STIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVL 874 (1433)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~i 874 (1433)
. .. . .. .. .....++++|+++.++ ++.+
T Consensus 248 ----~-------------~~----------~-~~----~~-------~~~~~l~~~~l~~~~~-------------~~~i 275 (490)
T PRK10938 248 ----P-------------SA----------R-HA----LP-------ANEPRIVLNNGVVSYN-------------DRPI 275 (490)
T ss_pred ----c-------------cc----------c-cc----cC-------CCCceEEEeceEEEEC-------------CeeE
Confidence 0 00 0 00 00 0011378888887763 2469
Q ss_pred eeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc----ccccceEEEeecCCCCCCC--CC
Q 000540 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ----ETFARISGYCEQNDIHSPF--VT 948 (1433)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~~--lT 948 (1433)
|+|+|+++++||+++|+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+.+. .|
T Consensus 276 l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~ 354 (490)
T PRK10938 276 LHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTS 354 (490)
T ss_pred EeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCc
Confidence 9999999999999999999999999999999996431 137999999976421 1134568999998765433 56
Q ss_pred HHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000540 949 VYESLLYSAWL--RLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1433)
Q Consensus 949 v~E~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEP 1025 (1433)
+++++.+.... ....... ...++.++++++.++|.+ ..++.+ ..|||||||||+||++|+.+|++||||||
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEP 428 (490)
T PRK10938 355 VRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEP 428 (490)
T ss_pred HHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 77766543211 1111112 223456889999999987 667654 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHH-hcCEEEEEecCcEEEEE
Q 000540 1026 TSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~i~~-~~D~v~~L~~Gg~~~y~ 1081 (1433)
|+|||+.++..+++.|++++++| .|||++||+++ ++.+ .+|++++|++| ++++.
T Consensus 429 t~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~G-~i~~~ 484 (490)
T PRK10938 429 LQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPDG-DIYRY 484 (490)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecCC-ceEEe
Confidence 99999999999999999998765 46999999986 4555 58999999975 54443
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-58 Score=514.58 Aligned_cols=470 Identities=25% Similarity=0.336 Sum_probs=365.1
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCCCcc-------ceEEEecC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFVPE-------RTAAYISQ 233 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1433)
....++++|||.|++||.+||+|.||||||-..+.+.|+++.. ..-+|+|.|+|.++-....+ ..|++++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3456999999999999999999999999999999999998762 35589999999997544321 37999999
Q ss_pred CC--CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000540 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1433)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1433)
++ .+-|-.|+..-+.-..++... ..+..++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 96 345556777766655544310 1122345567788999999876
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 000540 312 ADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNL 391 (1433)
Q Consensus 312 ~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1433)
...+ +.++.+|||||||||.||.||+.+|++||-||||++||.....+|++.|+++-. ..+..++.|+|+..-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~-~~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQA-ELGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHH-HhCcEEEEEeccHHHHHHh
Confidence 5433 468889999999999999999999999999999999999999999999999765 4578888899999999999
Q ss_pred cCeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccc
Q 000540 392 FDDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVG 471 (1433)
Q Consensus 392 ~D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1433)
+|+|+||.+|+++++|+.+.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999887632 1111 000
Q ss_pred hhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCcc
Q 000540 472 QKISDELQTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSV 551 (1433)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~ 551 (1433)
|.++. ..
T Consensus 255 ---------------------------------------r~Ll~------------------------------ae---- 261 (534)
T COG4172 255 ---------------------------------------RKLLA------------------------------AE---- 261 (534)
T ss_pred ---------------------------------------HHHHh------------------------------cC----
Confidence 00000 00
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCC
Q 000540 552 TDGGIYAGALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDP 631 (1433)
Q Consensus 552 ~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~ 631 (1433)
T Consensus 262 -------------------------------------------------------------------------------- 261 (534)
T COG4172 262 -------------------------------------------------------------------------------- 261 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHH
Q 000540 632 NAGRFFKQYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAI 711 (1433)
Q Consensus 632 ~~~~ff~~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 711 (1433)
T Consensus 262 -------------------------------------------------------------------------------- 261 (534)
T COG4172 262 -------------------------------------------------------------------------------- 261 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccc
Q 000540 712 VANEFLGHSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESN 791 (1433)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 791 (1433)
|. | .+
T Consensus 262 --------------P~-----g---------------------------------------------~~----------- 266 (534)
T COG4172 262 --------------PS-----G---------------------------------------------DP----------- 266 (534)
T ss_pred --------------CC-----C---------------------------------------------CC-----------
Confidence 00 0 00
Q ss_pred ccccccCCccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCc
Q 000540 792 EQDSTIGGTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDK 871 (1433)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~ 871 (1433)
. + ..+..|..++.+|+...++.+..+-.. ..+.
T Consensus 267 -----------------------~--------------p--------~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~ 299 (534)
T COG4172 267 -----------------------P--------------P--------LPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDH 299 (534)
T ss_pred -----------------------C--------------C--------CCCCCCceEEecceEEEEecCCccccc--cchh
Confidence 0 0 000012234555555444433211100 1134
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc------ccccceEEEeecCCC--C
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ------ETFARISGYCEQNDI--H 943 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~~--~ 943 (1433)
..++++||+++++||.+||+|.||||||||=.+|.+...+ +|+|.++|.++.. ...++.+-.|+||+. +
T Consensus 300 ~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSL 376 (534)
T COG4172 300 LRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSL 376 (534)
T ss_pred eEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCC
Confidence 5799999999999999999999999999999999997753 4999999988653 235677899999984 6
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000540 944 SPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1433)
Q Consensus 944 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlL 1022 (1433)
.|.+||.|-+.=+.....+ ..+..++++++.++|+.+||++- +++. +.++|||||||++|||||+-+|++++|
T Consensus 377 sPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~L 450 (534)
T COG4172 377 SPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILL 450 (534)
T ss_pred CcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEe
Confidence 7999999999877666554 46788899999999999999873 3443 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|||||.||-.-+.+|+++|+++.+ .|.+-++++||.. -+-.+||+|+||++ |++++.||.
T Consensus 451 DEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 451 DEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999999999999965 4999999999986 47778999999996 799999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.6e-57 Score=570.03 Aligned_cols=201 Identities=21% Similarity=0.299 Sum_probs=163.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 488899987753 34699999999999999999999999999999999997653 479999853 1
Q ss_pred ccccccceEEEeecCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000540 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1003 (1433)
..+||++|+. .+++.+||+|++.+...... .... +....++++.+++.+ ..++.+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 67788999999987643221 1111 123457899999964 456553 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEE-EEC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVG 1082 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~-y~G 1082 (1433)
|||++||++|+.+|++|||||||+|||+.++..+++.|+++. | |||++||++. .+.+.||++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999986 5778899999999766665 555
Q ss_pred C
Q 000540 1083 P 1083 (1433)
Q Consensus 1083 ~ 1083 (1433)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-57 Score=569.46 Aligned_cols=199 Identities=18% Similarity=0.253 Sum_probs=163.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 588999987763 24699999999999999999999999999999999997653 4799999873
Q ss_pred ccccccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000540 926 KQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 1002 (1433)
+.+||++|+.. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..++.+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 35899999864 456799999986421 11 1 1134577899999994 5666654 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++||++|+.+|++|||||||+|||+.+...+++.|+++ +.|||++||++. .+.+.||++++|++|+.+.+.|
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~g~i~~~~g 518 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITPDGVVDFSG 518 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEECCeEEEcCC
Confidence 999999999999999999999999999999999999999886 459999999986 5777899999999754333777
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 519 ~~ 520 (530)
T PRK15064 519 TY 520 (530)
T ss_pred CH
Confidence 64
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-56 Score=565.71 Aligned_cols=201 Identities=19% Similarity=0.280 Sum_probs=163.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|||++|++|++++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECC-c-
Confidence 488899987753 24699999999999999999999999999999999997653 479999854 1
Q ss_pred ccccccceEEEeecCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000540 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1003 (1433)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..++.+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47788999999987642211 1111 123457899999964 456553 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEE-EEC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVG 1082 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~-y~G 1082 (1433)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++||++. .+...||++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5777899999998766765 545
Q ss_pred C
Q 000540 1083 P 1083 (1433)
Q Consensus 1083 ~ 1083 (1433)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-54 Score=549.07 Aligned_cols=197 Identities=22% Similarity=0.345 Sum_probs=159.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 488899987763 34699999999999999999999999999999999997653 3789988641
Q ss_pred ccccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000540 926 KQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 1002 (1433)
..+||++|+. .+.+..|+.+++.- . .. ...+..+.++++.+++.+ ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999964 556554 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEE-EE
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YV 1081 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~-y~ 1081 (1433)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999986 57788999999997 4554 88
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.7e-54 Score=549.72 Aligned_cols=202 Identities=23% Similarity=0.342 Sum_probs=163.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.+.++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|...+ ..|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 478889887653 34699999999999999999999999999999999997653 4789988 4321
Q ss_pred ccccccceEEEeecCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000540 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 1003 (1433)
.+||++|+. .+++.+||.|++.+.... . .... ....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVNG--RPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--cccc--hHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 578889999999874321 0 1111 123467888889885 3456554 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-cCcEEEEEC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGYEIYVG 1082 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~-~Gg~~~y~G 1082 (1433)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...||++++|+ +|....|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 5778899999998 666666777
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 64
No 40
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8e-55 Score=545.79 Aligned_cols=211 Identities=20% Similarity=0.237 Sum_probs=171.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ + ..|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 477888876652 2 248999999999999999999999999999999998653 47888875
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1479999998888899999999874211 111 124678999999988777764 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ | +....|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 5777899999996 3 66666654
Q ss_pred Ccc---cchHHHHHhhC
Q 000540 1085 GRH---SCHLVSYFEAI 1098 (1433)
Q Consensus 1085 ~~~---~~~~~~yf~~~ 1098 (1433)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 321 12345667766
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-53 Score=502.52 Aligned_cols=447 Identities=22% Similarity=0.337 Sum_probs=346.9
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1433)
..++|+||||+++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++..-..++ .-|+.|.|+..+.|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 457999999999999999999999999999999999999998 99999999998765553 46999999999999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
++||.|||.++....... -. .+..+.+..+..+|+.+|+....++.||
T Consensus 97 ~LsVaeNifLgre~~~~~---g~---------------------------id~~~m~~~A~~~l~~lg~~~~~~~~v~-- 144 (500)
T COG1129 97 NLSVAENIFLGREPTRRF---GL---------------------------IDRKAMRRRARELLARLGLDIDPDTLVG-- 144 (500)
T ss_pred CccHHHHhhcccccccCC---Cc---------------------------cCHHHHHHHHHHHHHHcCCCCChhhhhh--
Confidence 999999999876433200 00 0112233456788999999755777777
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.||+||||-|.|||||..++++++||||||+|+...+..+++.++++. ..+..++.|+|..+|++++||+|.||.
T Consensus 145 ---~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVlR 219 (500)
T COG1129 145 ---DLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVLR 219 (500)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEEe
Confidence 499999999999999999999999999999999999999999999975 457889999999999999999999999
Q ss_pred CCeEEEecCH-HHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhh
Q 000540 400 NGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDEL 478 (1433)
Q Consensus 400 ~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1433)
+|+.+..++. ++.- .++.
T Consensus 220 DG~~v~~~~~~~~~~--------------------------------------------~~~l----------------- 238 (500)
T COG1129 220 DGRVVGTRPTAAETS--------------------------------------------EDEL----------------- 238 (500)
T ss_pred CCEEeeecccccCCC--------------------------------------------HHHH-----------------
Confidence 9999876552 2110 0000
Q ss_pred cCCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchh
Q 000540 479 QTPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYA 558 (1433)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~ 558 (1433)
.
T Consensus 239 --------------------------v----------------------------------------------------- 239 (500)
T COG1129 239 --------------------------V----------------------------------------------------- 239 (500)
T ss_pred --------------------------H-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHH
Q 000540 559 GALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFK 638 (1433)
Q Consensus 559 g~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~ 638 (1433)
-.|+|=
T Consensus 240 -----------------------------------------------------------------~~MvGr--------- 245 (500)
T COG1129 240 -----------------------------------------------------------------RLMVGR--------- 245 (500)
T ss_pred -----------------------------------------------------------------HHhhCc---------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcC
Q 000540 639 QYFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLG 718 (1433)
Q Consensus 639 ~~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 718 (1433)
++
T Consensus 246 ----------------------------------------------------------------------------~~-- 247 (500)
T COG1129 246 ----------------------------------------------------------------------------EL-- 247 (500)
T ss_pred ----------------------------------------------------------------------------ch--
Confidence 00
Q ss_pred CcccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccC
Q 000540 719 HSWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIG 798 (1433)
Q Consensus 719 ~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1433)
.. .| +
T Consensus 248 ---~~------------------------------------------------~~--~---------------------- 252 (500)
T COG1129 248 ---ED------------------------------------------------LF--P---------------------- 252 (500)
T ss_pred ---hh------------------------------------------------hc--c----------------------
Confidence 00 00 0
Q ss_pred CccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeee
Q 000540 799 GTVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGV 878 (1433)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~v 878 (1433)
. . ... ...+..+++++++.. ..++|+
T Consensus 253 ----------------------------~-~--~~~------~~~~~~l~v~~l~~~-----------------~~~~dv 278 (500)
T COG1129 253 ----------------------------E-P--PEE------GIGEPVLEVRNLSGG-----------------GKVRDV 278 (500)
T ss_pred ----------------------------c-c--ccc------CCCCcEEEEecCCCC-----------------CceeCc
Confidence 0 0 000 000112344444311 147899
Q ss_pred EEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCCCCHHH
Q 000540 879 SGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPFVTVYE 951 (1433)
Q Consensus 879 s~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~E 951 (1433)
||++++||++||-|-=|||+|-|+++|.|... ...|+|.+||.+.... ..+.-++|||.|. .+++.++|.+
T Consensus 279 Sf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~ 356 (500)
T COG1129 279 SFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAE 356 (500)
T ss_pred eeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHH
Confidence 99999999999999999999999999999544 3479999999986543 2345689999975 4678899999
Q ss_pred HHHHHHHhcCC-C-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 952 SLLYSAWLRLP-P-EIDSETRKMFIGEVMELVELKPLK-QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 952 ~l~f~a~lr~~-~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
|+.++...+.. . -.+....++.+++..+.++++... +.. +..||||++|||.|||.|..+|+||||||||.|
T Consensus 357 Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRG 431 (500)
T COG1129 357 NITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRG 431 (500)
T ss_pred heehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcC
Confidence 99887332221 1 244555566788899999886432 233 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
+|..+...|.++|++++++|++||++|-+.. |+..+||||++|++ |+++-
T Consensus 432 IDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 432 IDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred cccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999986 89999999999997 55543
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.6e-52 Score=531.48 Aligned_cols=200 Identities=18% Similarity=0.262 Sum_probs=157.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ +++.+|+|+|++|++|++++|+|||||||||||++|+|...+ ..|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 488999988763 123589999999999999999999999999999999997653 4689988652
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 1004 (1433)
..+||++|+. .+.+++.++..+......+ ... ++.+.++++.+++.+ ..++. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 3445666664332111111 111 234678999999974 45554 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEE-EECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI-YVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~-y~G~ 1083 (1433)
|||+||++|+.+|++|||||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|++ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999986 57778999999997 5665 7776
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.5e-51 Score=501.87 Aligned_cols=221 Identities=28% Similarity=0.322 Sum_probs=173.9
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCH
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1433)
.+.+++|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ .-+++|++|+....+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 456999999999999999999999999999999999999998 99998865 2379999999988888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChH---HH-HHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDID---VY-MKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~-~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+.+.-+..- .++...+..... ...++++.. .+ ......++.+.+.+++.++..||++.. ++.++
T Consensus 84 ~~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 9999876531 112222221111 111222111 01 111223456667788999999999877 65554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.||||||.||+||++|+.+|++|+|||||++||..+..++.+.|++. .+ ++++|+|++..+-+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 69999999999999999999999999999999999999999988752 34 77889999999999999999999
Q ss_pred CCeEE-EecCHHHHHH
Q 000540 400 NGQIV-YQGPRELVLE 414 (1433)
Q Consensus 400 ~G~iv-~~G~~~~~~~ 414 (1433)
.|++. |.|.++...+
T Consensus 225 ~g~l~~y~Gny~~~~~ 240 (530)
T COG0488 225 RGKLTPYKGNYSSYLE 240 (530)
T ss_pred CCceeEecCCHHHHHH
Confidence 99874 7788776543
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.1e-49 Score=457.84 Aligned_cols=457 Identities=21% Similarity=0.308 Sum_probs=355.3
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1433)
...+++|||+++++||+.||+|.||||||||+++|.|.++|+ +|+|.++|+++.-..|+ .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999999 99999999998765553 46999999999999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
++||.|||..+..-... .+ ....+...+++.+.+..||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------------------------------~~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------------------------------IDRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------------------------------cCHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999988642100 00 01122345678889999999988887775
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++.. .+.+|+.|+|-..|+.+.||++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999998864 46778889999999999999999999
Q ss_pred CCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcChhhhhhhhhccCCCCccCCHHHHHHHHhccccchhhhhhhc
Q 000540 400 NGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQKQYWVHKERPYRFVTVQEFTEGFQSFHVGQKISDELQ 479 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1433)
.|+++-.-++ . + + .+.+++++
T Consensus 215 ~Gkvvgt~~~--~--------------~------------------------~---~t~~ela~---------------- 235 (501)
T COG3845 215 RGKVVGTVDP--V--------------A------------------------E---TTEEELAE---------------- 235 (501)
T ss_pred CCeEEeeecC--C--------------C------------------------C---CCHHHHHH----------------
Confidence 9998643210 0 0 0 00000000
Q ss_pred CCccccccccccccccccCCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHhhheeccCCCCccccccchhH
Q 000540 480 TPFDKSKSHRAALTTEVYGAGRRELLKACISRELLLMKRNSFVYIFKLIQIASVALVYMTLFFRTKMHKDSVTDGGIYAG 559 (1433)
Q Consensus 480 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~ali~g~~f~~~~~~~~~~~~~~~~~g 559 (1433)
+
T Consensus 236 -----------------------------------l-------------------------------------------- 236 (501)
T COG3845 236 -----------------------------------L-------------------------------------------- 236 (501)
T ss_pred -----------------------------------H--------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcCCccChhhHHHHHHHHHhhHHHHHHHHHHhhhhhhcccCCCHHHHHHH
Q 000540 560 ALFFATVMVMFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGLDPNAGRFFKQ 639 (1433)
Q Consensus 560 ~lf~~~~~~~~~~~~~~~~~~~~~~vf~ker~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~igl~~~~~~ff~~ 639 (1433)
|+
T Consensus 237 ------------------------------------------------------------------Mv------------ 238 (501)
T COG3845 237 ------------------------------------------------------------------MV------------ 238 (501)
T ss_pred ------------------------------------------------------------------hc------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000540 640 YFLLLAANQMASALFRLIAATGRNMVVANTFGSFALLVLFSLGGFVLSREDIKKWWKWAYWCSPLSYAQNAIVANEFLGH 719 (1433)
Q Consensus 640 ~l~l~~~~~~~~~l~~~iaa~~~~~~ia~~~~~~~~~~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1433)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCcccchhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccCC
Q 000540 720 SWKKFTPNSIESLGVQVLKSRGFFAHAYWFWLGLGALFGFVLLFNLGFTLALTFLNRLEKPRAILTEESESNEQDSTIGG 799 (1433)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~l~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1433)
|.++.. .
T Consensus 239 -------------G~~v~~-------------------------------------~----------------------- 245 (501)
T COG3845 239 -------------GREVVL-------------------------------------R----------------------- 245 (501)
T ss_pred -------------CCcccc-------------------------------------c-----------------------
Confidence 000000 0
Q ss_pred ccccccCCCCCCcccccccCCcccccccccCCCCCCCCcccCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeE
Q 000540 800 TVQLSTHGESGNDIRERNSSSHSLTLTEAEGSHPKKRGMVLPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVS 879 (1433)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1433)
.. + .+...+ +..++++|++...+ .....+++||
T Consensus 246 -------------~~-~---------------~~~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs 278 (501)
T COG3845 246 -------------VV-K---------------PPSTPG------EVVLEVEDLSVKDR------------RGVTAVKDVS 278 (501)
T ss_pred -------------cc-c---------------CCCCCC------CeEEEEeeeEeecC------------CCCceeeeee
Confidence 00 0 000000 12467777765432 1246799999
Q ss_pred EEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC-c---cc-cccceEEEeecCCC---CCCCCCHHH
Q 000540 880 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK-K---QE-TFARISGYCEQNDI---HSPFVTVYE 951 (1433)
Q Consensus 880 ~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~~-~~~~~~gyv~Q~~~---~~~~lTv~E 951 (1433)
|++++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. . .. ..+.-++|||.|.. +.+.+|+.|
T Consensus 279 ~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~e 356 (501)
T COG3845 279 FEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAE 356 (501)
T ss_pred eEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHH
Confidence 99999999999999999999999999997643 249999999986 2 11 22346899999873 468899999
Q ss_pred HHHHHHHhcC----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000540 952 SLLYSAWLRL----PPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1433)
Q Consensus 952 ~l~f~a~lr~----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTs 1027 (1433)
|+.+...-+. ..-.+....++...++++.++........ ..+.||||++||+-+||+|.++|++|+..+||.
T Consensus 357 N~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTr 432 (501)
T COG3845 357 NLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTR 432 (501)
T ss_pred HhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCc
Confidence 9987654221 11245566777889999999887332211 146799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|||..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++|||.+|.+ |+++...+..
T Consensus 433 GLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 433 GLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred cccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999997 89999999999997 6777666653
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-44 Score=372.00 Aligned_cols=214 Identities=26% Similarity=0.358 Sum_probs=187.6
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
|+++|++.++ +...+|+|||+++++||+++|+|||||||||||+||.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5666776554 56789999999999999999999999999999999999876 34899999996542
Q ss_pred ----cccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 ----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
....|+.+|+|+|+..+||++||.||+..+-..- ...++++.++...+.|+.+||.+.+|..+ .+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2346778999999999999999999999864321 34567777888899999999999999874 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|||||+|||||+.+|+++++|||||.|||+....|.+.+++++++|.|.||+||++.. ..+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6778999999986 7888888
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-44 Score=373.30 Aligned_cols=221 Identities=25% Similarity=0.394 Sum_probs=191.0
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC----CccceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF----VPERTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 239 (1433)
...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 467999999999999999999999999999999999999998 99999999876321 23578999999999999
Q ss_pred CCCHHHHHHHhhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
++||.||+..+..- ++ .+..+++.++.++|+.+||.+.+|.
T Consensus 91 HlTvleNv~lap~~v~~----------------------------------~~k~eA~~~A~~lL~~VGL~~ka~~---- 132 (240)
T COG1126 91 HLTVLENVTLAPVKVKK----------------------------------LSKAEAREKALELLEKVGLADKADA---- 132 (240)
T ss_pred cchHHHHHHhhhHHHcC----------------------------------CCHHHHHHHHHHHHHHcCchhhhhh----
Confidence 99999999987531 11 1223455567789999999999884
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
++..|||||||||+|||||+.+|+++++|||||+|||+...++.+.++++++. +.+.+.++|....+.+.+|||+.|
T Consensus 133 -yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e--GmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 133 -YPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE--GMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred -CccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc--CCeEEEEechhHHHHHhhheEEEe
Confidence 55679999999999999999999999999999999999999999999998763 566777899999999999999999
Q ss_pred cCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000540 399 SNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev 436 (1433)
++|+++..|+++++ |..|.+....+|+..+
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~i 239 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSKI 239 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHhh
Confidence 99999999999987 4567777677777643
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.6e-42 Score=395.21 Aligned_cols=202 Identities=19% Similarity=0.237 Sum_probs=156.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..+.++|+++.++. +..++++++|-+.+++.+|++||||+||||||+++.|...+ ..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc
Confidence 46889999887652 22689999999999999999999999999999999997653 35655432211
Q ss_pred CccccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 925 KKQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 925 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
.+++..|+- .+.-..++.|+++=.. .++.+.+.+..++..+||+...+... .+.||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~~--------~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPKF--------PDEKELEEMRSILGRFGLTGDAQVVP----MSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHhc--------cccchHHHHHHHHHHhCCCccccccc----hhhcccc
Confidence 123334432 2233467777765211 11334556788999999996554432 4689999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||+||..|+.++..|.+|+|||||+|||..+...+-+.|.+. ..+||.++||... |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999998765 4689999999874 778899999999999999988
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 74
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-42 Score=375.32 Aligned_cols=225 Identities=27% Similarity=0.365 Sum_probs=198.5
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1433)
....+|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..... ++.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999998876543 468999999999
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
++...||.||++|..+..+.+ +.+.+.++.++|+.+||++.++
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~--- 136 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKAD--- 136 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhc---
Confidence 999999999999998776532 2335567889999999998887
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+++.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|++.|++..+ ..+.+|+.++|.++-+-+.||||.
T Consensus 137 --~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~-~lglTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 137 --RYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINR-ELGLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred --cCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHH-HcCCEEEEEechHHHHHHHhhhhe
Confidence 45668999999999999999999999999999999999999999999999765 456778889999999999999999
Q ss_pred EEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcC
Q 000540 397 LLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTS 438 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s 438 (1433)
||++|+++++|+..++ |..|.+.-..+|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999988 456777666777776553
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=372.79 Aligned_cols=219 Identities=23% Similarity=0.323 Sum_probs=190.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
|++++|+-.+... ..+...+|+|||++|++||++||+|+||||||||++++.++..+ .+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 5677776444321 11345799999999999999999999999999999999998764 4899999997653
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
. +..|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+..+..+ .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 2 2457789999999999999999999999887754 567888999999999999999988874 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
|||||||+|||||+.+|+||++|||||.|||++.+.|.++|+++.++ |.||+++||+++ -+-+.||||.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999987 37789999999996 7999
Q ss_pred EECCCC
Q 000540 1080 YVGPLG 1085 (1433)
Q Consensus 1080 y~G~~~ 1085 (1433)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999863
No 50
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-41 Score=388.30 Aligned_cols=211 Identities=32% Similarity=0.440 Sum_probs=185.9
Q ss_pred ceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc--ccccceEEEeecCCCCCCCCC
Q 000540 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ--ETFARISGYCEQNDIHSPFVT 948 (1433)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 948 (1433)
++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 46899999999999999999999999999999999998764 58999999988654 356678999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 949 VYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
|+|+|.|.+.++.+.. ...+++++++++.++|.+..++. +++||+|||||++||+||+++|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999999986543 44566799999999999865555 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCCcccchHHHHHhh
Q 000540 1029 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLGRHSCHLVSYFEA 1097 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~~~~~~~~~yf~~ 1097 (1433)
|||.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|+. .++...+..
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~----~~l~~~~~~ 230 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP----EELKEKFGG 230 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH----HHHHHhhcc
Confidence 99999999999999999887 89999999997 68888999999986 799999975 345555443
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-41 Score=368.90 Aligned_cols=218 Identities=25% Similarity=0.385 Sum_probs=185.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++. + ++|+|||+++++|++++|+||||||||||+|+|.|..++ .+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 5889999988741 2 599999999999999999999999999999999997663 489999999887
Q ss_pred ccccccceEEEeecCCCC--CCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 926 KQETFARISGYCEQNDIH--SPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~--~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
+...-+..+|||||...+ ...+||+|.+..+...+.. .....+..++.++++|+.+|+.+++|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 654445679999996533 2348999999886433321 111123346779999999999999999876 59999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+|+.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 5889999999997 4789999
Q ss_pred CCCc
Q 000540 1083 PLGR 1086 (1433)
Q Consensus 1083 ~~~~ 1086 (1433)
++..
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9853
No 52
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=387.83 Aligned_cols=217 Identities=30% Similarity=0.434 Sum_probs=195.6
Q ss_pred eecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc-ceEEEecCCCCCCCCCCHHH
Q 000540 167 ILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1433)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1433)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998775 78999999999999999999
Q ss_pred HHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000540 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGIS 325 (1433)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1433)
|++|+.+.++.. ..+.+.+++++.+.|+|++..|. .+++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r-----~P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNR-----KPLQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhc-----CcccCC
Confidence 999999877542 12345678899999999998884 566899
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000540 326 GGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVY 405 (1433)
Q Consensus 326 GGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~ 405 (1433)
|||||||++||||+.+|++++||||+|.||+..+..+...|+++ |+.-+++++.++|+..|+..++|+|++|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~l-h~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKL-HERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHH-HHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999999999885 44567888889999999999999999999999999
Q ss_pred ecCHHHHHHHHHhcCCCCCCCCChHHHHH
Q 000540 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1433)
Q Consensus 406 ~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 434 (1433)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4677776777654
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-41 Score=358.16 Aligned_cols=210 Identities=26% Similarity=0.399 Sum_probs=186.9
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1433)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+.+. +|.||||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 467999999999999999999999999999999999999998 9999999999987654 6899999999999999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||.|||++-..+++.+ .++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999999877665432 12345678999999999752 123478
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.+|||||+|||.+||||+.+|++++||||+++|||-++.++.+.++++.+ .-+++++.++|+.+|.+.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~-~l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQK-ELGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHH-HhCCEEEEEecCHHHHHhhhceEEEecC
Confidence 889999999999999999999999999999999999999999998888654 4567788899999999999999999999
Q ss_pred CeEEEecCHHHHHH
Q 000540 401 GQIVYQGPRELVLE 414 (1433)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1433)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999864
No 54
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.8e-41 Score=355.59 Aligned_cols=231 Identities=26% Similarity=0.360 Sum_probs=199.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.|++++++.+. +.+.|++|||++|++||+++||||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 57888887654 567899999999999999999999999999999999998774 489999999886
Q ss_pred ccc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000540 926 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLPGVSG 998 (1433)
Q Consensus 926 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 998 (1433)
.+. ..++++|+++|+-.+|..+||+||+.|..+ ...+.+++..++.+..-|+.+||.+. .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 431 346779999999999999999999998643 33456677778888888999999887 6655 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||+|||+++|||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..||++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999997 68999999999997 79
Q ss_pred EEEECCCCcc----cchHHHHHhhCCC
Q 000540 1078 EIYVGPLGRH----SCHLVSYFEAIPG 1100 (1433)
Q Consensus 1078 ~~y~G~~~~~----~~~~~~yf~~~~~ 1100 (1433)
++..|+..+- ...+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 9999997521 1356778887643
No 55
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=361.83 Aligned_cols=204 Identities=25% Similarity=0.366 Sum_probs=180.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.+.++++++.+. ...+|+|||++|++||+++|+|||||||||||++|+|..++ ..|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 366777776653 36799999999999999999999999999999999998774 489999999887
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.. ..+.+|||+|++.++|.+||+||+.++...+. .+++++++++.+.|+.+||.+..|+.+ .+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 32 34568999999999999999999999876653 345666778999999999999999874 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++.+ +++|||++|||.+ |...++|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999865 5899999999997 677889999999974
No 56
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.9e-41 Score=386.23 Aligned_cols=223 Identities=29% Similarity=0.416 Sum_probs=199.4
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1433)
...+|+|+|++|++||+++|+|||||||||||++|+|+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 457999999999999999999999999999999999999999 9999999999998777 478999999999999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||++|+.+.++... ..+.+.+++++|+.++|++.++ +++.
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChh
Confidence 9999999987442111 1224567899999999998766 5666
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+|||||+.+|++|+||||.|+||..-+.++...++++.+.. +.+.+.++|+..|.+.++|||++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 899999999999999999999999999999999999999999999876654 7788889999999999999999999999
Q ss_pred EEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000540 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1433)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev 436 (1433)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 5678888889998754
No 57
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.5e-41 Score=368.67 Aligned_cols=218 Identities=28% Similarity=0.385 Sum_probs=187.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++.+|+++.|+ ++.+|+|+||++++|++++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCch
Confidence 367888888874 46899999999999999999999999999999999997663 479999999986
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. +.+++.++|+||.....+.+||+|.+.++..-+... ....++.++.++++|+.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 456788999999998888999999999874332211 1123334457899999999999999875 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||+.|||||+++|+||+||||||.||...+..++++++++++ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999984 7789999999996 78999
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99864
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-40 Score=358.06 Aligned_cols=193 Identities=28% Similarity=0.428 Sum_probs=167.8
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc------ccc-cceEEEeecCCCCC
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ------ETF-ARISGYCEQNDIHS 944 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~~~~~ 944 (1433)
..+|++||++|++||+++|+|||||||||||++|.|...+ .+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 48999999976542 123 45799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000540 945 PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLD 1023 (1433)
|++||+||+.+...+... ....+++.++++++.+||.+..+ +. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245667889999999997665 54 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
|||.+||+.++..|++++++++++ |+|||++|||+ ++...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999865 99999999997 4788999999999865
No 59
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=353.37 Aligned_cols=213 Identities=25% Similarity=0.350 Sum_probs=188.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++|+||+..+ +.+.+++|+|++|++||++.++|||||||||+|++|.++.++ .+|+|.+||.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 5677877554 356799999999999999999999999999999999998774 4899999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP--LKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 1001 (1433)
. ..+||.+|||-|+..++|++||.||+.+--.+. ..++++.+++++|+|+.+||.+ +.++. +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 356889999999999999999999998765553 3467788889999999999975 67776 467999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
||+|||.+||||+.+|+||+||||+++|||.++..+++.++++.++ |+|||++|||.. +.+.+.|||.+|++ |+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 999999999997 78899999999985 67777
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7765
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=362.44 Aligned_cols=224 Identities=29% Similarity=0.456 Sum_probs=191.1
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCe---eCCCCCc-cceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH---NMDEFVP-ERTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1433)
...+++|||+.|+.||++|++|||||||||||++|+|+..|+ +|.|.+||+ +.+.... .|.||||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 355899999999999999999999999999999999999998 999999999 5555333 488999999999999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.|||.+||+||.+++.. + | +..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~--~-----------------p-------------~~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKE--R-----------------P-------------SEAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhccccccc--C-----------------C-------------ChhhHHHHHHHHHHHhcccchhh-----c
Confidence 99999999999876521 0 0 11234456888999999987766 6
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
++..|||||||||++||||+..|++|+||||+++||...+..+-+.|+++... -+.+++.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~-~~~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDR-LGVTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHh-hCceEEEEeCCHHHHHhhcceEEEec
Confidence 77889999999999999999999999999999999999999999999987554 45677779999999999999999999
Q ss_pred CCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000540 400 NGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev 436 (1433)
+|+|...||++++. ..|...-+..|+-++
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~~ 241 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGEV 241 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceecccccc
Confidence 99999999999984 446655555555443
No 61
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=351.27 Aligned_cols=219 Identities=26% Similarity=0.324 Sum_probs=186.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++-.++ +++++|+|||++|++||++||+|+|||||||||++|.|... +..|+|.++|..+
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888876653 45689999999999999999999999999999999999765 4589999999764
Q ss_pred cc------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000540 926 KQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEIDSETRKMFIGEVMELVELKPLKQSLVGLP 994 (1433)
Q Consensus 926 ~~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1433)
.. +.+++.+||++|+..+.+.++|.+|++.+..-+.+ .....++.+..+-++|+.+|+.+.+-+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 24577899999999999999999999876432221 12333444556778999999999887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
..|||||+|||+|||||+.+|+||+.|||+++|||.+++.||+.|+++++ +|.|||++.||... ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 46999999999999999999999999999999999999999999999975 49999999999874 678999999998
Q ss_pred cCcEEEEECCCC
Q 000540 1074 RGGYEIYVGPLG 1085 (1433)
Q Consensus 1074 ~Gg~~~y~G~~~ 1085 (1433)
+ |+++|.||..
T Consensus 223 ~-G~ivfDg~~~ 233 (258)
T COG3638 223 A-GRIVFDGPAS 233 (258)
T ss_pred C-CcEEEeCChh
Confidence 6 7999999985
No 62
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.3e-40 Score=363.14 Aligned_cols=210 Identities=32% Similarity=0.456 Sum_probs=182.2
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGE 240 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1433)
.+.+|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 356999999999999999999999999999999999999998 99999999999876553 789999999888889
Q ss_pred CCHHHHHHHhhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 241 MTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 241 lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
+||+|-+.+|..-. +. .. ...++....+++.|+.+|+.+.++..+
T Consensus 91 ~tV~d~V~~GR~p~~~~-------------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~--- 136 (258)
T COG1120 91 LTVYELVLLGRYPHLGL-------------------FG------------RPSKEDEEIVEEALELLGLEHLADRPV--- 136 (258)
T ss_pred cEEeehHhhcCCccccc-------------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCcc---
Confidence 99999999985321 10 00 011122336888999999999998655
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
..|||||||||.|||||+.+|++|+||||||+||...+.++++.++++.++. +.++++++|+.....++||++++|+
T Consensus 137 --~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 137 --DELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLK 213 (258)
T ss_pred --cccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999987644 5667778899999999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998875
No 63
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=340.07 Aligned_cols=202 Identities=27% Similarity=0.373 Sum_probs=184.1
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc--ccccceEEEeecCCCCCCCCCH
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ--ETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|.++|.+... ...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3589999999999999999999999999999999998774 48999999998543 3467889999988899999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
+|||.|.+++. +....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|+++++|||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 34566778889999999999999999976 59999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|..+...+.+.++++.++|++||++||.++ ++.++||++++|++ |++++.|...
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999988999999999986 78889999999997 7899999863
No 64
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-40 Score=353.45 Aligned_cols=194 Identities=27% Similarity=0.401 Sum_probs=172.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
..+|+|+|++|.+||+++|+||||||||||||+|+|+.+|+ +|+|.++|.+++ .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 56999999999999999999999999999999999999998 999999999883 3567899999999999999999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.|+.+.++... .+...+++.+|+.+||.+..| .++..|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987654211 122346788999999998877 567789
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC--Ce
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN--GQ 402 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~--G~ 402 (1433)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.++. +.+++.++|+-+|...++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 9999999999999999999999999999999999999999888877654 57778899999999999999999998 44
Q ss_pred E
Q 000540 403 I 403 (1433)
Q Consensus 403 i 403 (1433)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 65
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6.3e-35 Score=394.81 Aligned_cols=216 Identities=22% Similarity=0.342 Sum_probs=186.0
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++++|++..++. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46889999877631 235699999999999999999999999999999999998763 48999999988
Q ss_pred Ccc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 925 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.+||.+..++.+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2245679999999999999999999999876653 223344567889999999998888764 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|||||+||+||+.+|+||+|||||+|||+.+++.++++|++++ +|+|||++||+++ ++..++||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57778999999997 6888888
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 66
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=332.26 Aligned_cols=212 Identities=26% Similarity=0.319 Sum_probs=182.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
|.|+||+-.|+. .+++|+||||+|++||++-|+|||||||||||++|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 567888766542 3569999999999999999999999999999999999665 34799999999864
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. -.+|++|+|+||..+.+..||+||+.|...... .+..+.++++.++|+.+||.+..+.. +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 31 257889999999999999999999999876653 34566778899999999999988876 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||+|||+||||++.+|++|+.||||.+|||..+..||+++.++...|.|||+.|||.+. +-..-.|++.|++ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999998889999999999652 4445578999987 56665
Q ss_pred EC
Q 000540 1081 VG 1082 (1433)
Q Consensus 1081 ~G 1082 (1433)
..
T Consensus 218 d~ 219 (223)
T COG2884 218 DE 219 (223)
T ss_pred cc
Confidence 44
No 67
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=355.57 Aligned_cols=206 Identities=29% Similarity=0.436 Sum_probs=185.1
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCc---cCcc-ccccceEEEeecCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGY---PKKQ-ETFARISGYCEQNDIHSP 945 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~ 945 (1433)
+...+++|||+.|+.||++||+|||||||||||++|+|+.++ ..|.|.+||. +.+. ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 456789999999999999999999999999999999998774 4899999998 5444 334678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000540 946 FVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1433)
Q Consensus 946 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEP 1025 (1433)
++||.||+.|+...+ ....+..+.+.++++.|+.++|+++.++. +.+|||||||||++||||+.+|++|+||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998776 34456677888999999999999999987 467999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1026 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
.++||+.-+..+.+.|+++.++ |.|+|++|||+. +.++.+|||++|++ |++.-.||..
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 9999999999999999999876 999999999997 79999999999997 6777888763
No 68
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=337.69 Aligned_cols=217 Identities=23% Similarity=0.307 Sum_probs=187.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCC---CCCceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~---~~~~~~~G~i~i~g 922 (1433)
.++.+|++..+ +.+.+|+|||+.|++++++||+|||||||||||+++... .++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 47778888766 356799999999999999999999999999999999984 33456899999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGV 996 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1433)
.++.. ..+|+.+|.|+|.+.-+| +|++||+.|+.++....+ ++.++.|++.|+...|++ ..|++-.. .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 88643 246788999999999999 999999999988765433 667788999999999976 44444322 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
.+|||||+|||||||||+.+|+|||||||||+|||.+...|-++|.+++ +.-|||++||.+. ......|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 5799999999987 57788999999987 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
+++++|++
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999997
No 69
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4e-39 Score=371.87 Aligned_cols=212 Identities=31% Similarity=0.453 Sum_probs=185.6
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC--CccceEEEecCCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--VPERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1433)
.+.+|+||||++++|++++|+||||||||||+|+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 467999999999999999999999999999999999999998 99999999987652 3357899999999999999
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.|.+++.+... ...+.+++++++.+||++..+ ..+
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~-----~~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKAN-----KKV 134 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhC-----cch
Confidence 99999999998875421 012345788999999998444 345
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
++||+|||||++||.||+++|++|||||||+|||+.++.++.+.|++++.. ++++|++.+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999998764 4467777889999999999999999999
Q ss_pred eEEEecCHHHHHHHHHh
Q 000540 402 QIVYQGPRELVLEFFES 418 (1433)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1433)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998766543
No 70
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-39 Score=343.33 Aligned_cols=211 Identities=24% Similarity=0.343 Sum_probs=182.3
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1433)
..+.|++|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.++|.++..... ++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3467999999999999999999999999999999999999998 9999999999866543 367999999999
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
+|..+||+||+.|..+-... .+....+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~---------------------------------lp~~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK---------------------------------LPESLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc---------------------------------CCHHHHHHHHHHHHHhcCCChh----h
Confidence 99999999999997643211 0112233455666888999764 2
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
++.++.+||||+|||+++||||+.+|+++|+||||+||||.++..+.+.++++... -+.++++++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~-lg~T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDA-LGLTVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHh-hCCEEEEEECChHHHHhhhceEE
Confidence 34678899999999999999999999999999999999999999999999987654 46777779999999999999999
Q ss_pred EEcCCeEEEecCHHHHHH
Q 000540 397 LLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~~ 414 (1433)
+|.+|+|+..|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 71
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-39 Score=352.07 Aligned_cols=208 Identities=26% Similarity=0.410 Sum_probs=176.9
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCC--CCCCCCCH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHD--NHIGEMTV 243 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1433)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+.++...+.+||||||.. .+-+.+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 4999999999999999999999999999999999999998 999999999887766667899999953 34456899
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+|.+..+..-+. + . ... ...+....++++|+.+|+.+.+|..+| .
T Consensus 95 ~d~V~~g~~~~~-g-~---~~~-------------------------~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~ 139 (254)
T COG1121 95 KDVVLLGRYGKK-G-W---FRR-------------------------LNKKDKEKVDEALERVGMEDLRDRQIG-----E 139 (254)
T ss_pred HHHHHccCcccc-c-c---ccc-------------------------ccHHHHHHHHHHHHHcCchhhhCCccc-----c
Confidence 999998742210 0 0 000 011123568899999999999998777 4
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.++ +.+|++++|+...+.+.||+|+.|++ ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999998654 67788899999999999999999954 68
Q ss_pred EEecCHHHHHH
Q 000540 404 VYQGPRELVLE 414 (1433)
Q Consensus 404 v~~G~~~~~~~ 414 (1433)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999998753
No 72
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7e-39 Score=346.81 Aligned_cols=197 Identities=27% Similarity=0.414 Sum_probs=168.4
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1433)
...+|++||++|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++..+.. ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 367999999999999999999999999999999999999998 9999999999876543 357999999999
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
++|++||+||+.+...+.+.... +....++.+++.+||++..+.
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~-- 137 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLK-- 137 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhcc--
Confidence 99999999999987766543210 122346778999999876551
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+. .++++++++|+ +++...|||++
T Consensus 138 --~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd-~~lA~~~dr~i 213 (226)
T COG1136 138 --KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHD-PELAKYADRVI 213 (226)
T ss_pred --CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCC-HHHHHhCCEEE
Confidence 345579999999999999999999999999999999999999999999998764 35666667776 57778999999
Q ss_pred EEcCCeE
Q 000540 397 LLSNGQI 403 (1433)
Q Consensus 397 vL~~G~i 403 (1433)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999994
No 73
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-39 Score=390.66 Aligned_cols=214 Identities=24% Similarity=0.431 Sum_probs=178.2
Q ss_pred cCCccccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCC
Q 000540 158 LPSRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQH 234 (1433)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1433)
||.| ++.+||+|+||+|+|||.|||+|||||||||+.++|..+++|+ +|+|.+||+|+++.++ ++.||+|.|+
T Consensus 475 YP~R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QE 550 (716)
T KOG0058|consen 475 YPTR-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQE 550 (716)
T ss_pred cCCC-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeecc
Confidence 4554 3467999999999999999999999999999999999999999 9999999999988876 4789999999
Q ss_pred CCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
|.+|. .||+|||.||.. . ...+.+..+++..... + =+.++++.+||
T Consensus 551 PvLFs-~sI~eNI~YG~~--~--~t~e~i~~AAk~ANah--------------------------~---FI~~~p~gY~T 596 (716)
T KOG0058|consen 551 PVLFS-GSIRENIAYGLD--N--ATDEEIEAAAKMANAH--------------------------E---FITNFPDGYNT 596 (716)
T ss_pred ceeec-ccHHHHHhcCCC--C--CCHHHHHHHHHHhChH--------------------------H---HHHhCcccccc
Confidence 87764 699999999875 1 1223333332222110 1 14579999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.||+++. .||||||||++|||||+++|+||||||.||+||+++...+.+.|.+..+ + .+|++|. |+.++.+.+|+
T Consensus 597 ~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~-rTVlvIA-HRLSTV~~Ad~ 671 (716)
T KOG0058|consen 597 VVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--G-RTVLVIA-HRLSTVRHADQ 671 (716)
T ss_pred ccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--C-CeEEEEe-hhhhHhhhccE
Confidence 9999887 5999999999999999999999999999999999999999999987643 3 3444444 46778899999
Q ss_pred EEEEcCCeEEEecCHHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~~ 414 (1433)
|+|+++|++++.|+++|+++
T Consensus 672 Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 672 IVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEEcCCeEEecccHHHHhh
Confidence 99999999999999999975
No 74
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=333.19 Aligned_cols=209 Identities=30% Similarity=0.344 Sum_probs=184.5
Q ss_pred cccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCC
Q 000540 162 KQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIG 239 (1433)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~ 239 (1433)
+...++++||||+++.|++++|+|||||||||+|++|++++.|+ +|+|++||.+..+.. .++.+|.++.+..++.
T Consensus 12 ~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~ 88 (245)
T COG4555 12 GSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYA 88 (245)
T ss_pred cCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhh
Confidence 33455899999999999999999999999999999999999999 999999999875432 3578999997788999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.||++|||.|.+++.+.. ..+.+.+++.+.+.|+|.+|.|+.+|
T Consensus 89 RlT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~-- 132 (245)
T COG4555 89 RLTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVG-- 132 (245)
T ss_pred hhhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHh--
Confidence 999999999988765431 12345678889999999999999887
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
++|-|+||||+|||||+++|++++|||||||||..+...+.+.++++. ..+.+|+..+|..+|+..+||+|++|+
T Consensus 133 ---~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh 207 (245)
T COG4555 133 ---EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLH 207 (245)
T ss_pred ---hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEe
Confidence 599999999999999999999999999999999999999999998863 336677788999999999999999999
Q ss_pred CCeEEEecCHHHHHH
Q 000540 400 NGQIVYQGPRELVLE 414 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1433)
+|++++.|+.+++.+
T Consensus 208 ~Gevv~~gs~~~l~~ 222 (245)
T COG4555 208 KGEVVLEGSIEALDA 222 (245)
T ss_pred cCcEEEcCCHHHHHH
Confidence 999999999998754
No 75
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.2e-39 Score=367.65 Aligned_cols=214 Identities=27% Similarity=0.385 Sum_probs=189.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++-.+ +...+|+|||++|+.||+++|+|||||||||||++|+|+.. +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~y-------------g~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSF-------------GSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEc-------------CCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 46677776554 22239999999999999999999999999999999999876 3589999999987
Q ss_pred cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
+. ....|.+++|+|+..++|++||+||+.|+.+.+. .++++.+++|.++.+.++|.++.|+++ ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 66 3456889999999999999999999999987763 456778889999999999999999984 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|++ |++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~~-G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMND-GRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEeC-CeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999975 78899999999995 78888887
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 76
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=334.91 Aligned_cols=222 Identities=26% Similarity=0.380 Sum_probs=180.6
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN 236 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1433)
.+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+.. .++++|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999998755 34688999999999986532 3689999999999
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc-cccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC-ADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 315 (1433)
-|| +|++||++||.+..|... +.+ +++++..|+.-+|-+. .|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh
Confidence 998 999999999999887532 111 1233333444333321 2211
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
. +...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+.+.++. ..-+|++++|.+.+..+..|++
T Consensus 144 -~-~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 -H-KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred -h-CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhh
Confidence 1 2344799999999999999999999999999999999999999999998874 3567777999999999999999
Q ss_pred EEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHH
Q 000540 396 ILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1433)
..+..|++++.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999987 4567776666664
No 77
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-39 Score=368.34 Aligned_cols=215 Identities=27% Similarity=0.376 Sum_probs=190.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++-.+ +...+|+|||++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 57788876544 456899999999999999999999999999999999998764 489999999987
Q ss_pred ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
... ..+|.+|+|+|+..+||++||+||+.|+..++ ....+++.+++++++++.++|.++.++.+ .+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 653 35788999999999999999999999997743 33455667889999999999999999874 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||.. +.+.++|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999999754 999999999986 78899999999986 68877776
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 5
No 78
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-38 Score=337.71 Aligned_cols=217 Identities=25% Similarity=0.352 Sum_probs=180.9
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1433)
..+++|+|||+.|++||+++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 3456999999999999999999999999999999999999998 9999999988765432 468999999999
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
+.+.+||.+|+..+..-+. +...- -.+. -.++.+.++-+.|+.+|+.+.+.+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~s---------lfgl---------------fsk~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRS---------LFGL---------------FSKEDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHH---------HhCC---------------CCHHHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 11100 0111 11223345667899999999888776
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+ .|||||+|||+|||||+.+|++++-|||+++|||.++.++++.|++.....+.|+++ .+|...-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhhe
Confidence 5 599999999999999999999999999999999999999999999988766555554 5667788999999999
Q ss_pred EEcCCeEEEecCHHHHHH
Q 000540 397 LLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~~ 414 (1433)
-|++|+|+|.||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988754
No 79
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.7e-38 Score=365.85 Aligned_cols=214 Identities=27% Similarity=0.401 Sum_probs=186.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++..+. .+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 578889887763 34699999999999999999999999999999999998763 479999999886
Q ss_pred cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
.. ...++.+||++|++.+++.+||+||+.|.+.++. .+..+.++.++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2345779999999999999999999998765532 233444556789999999998888775 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999987 67889999999997 68899998
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.3e-37 Score=365.41 Aligned_cols=217 Identities=24% Similarity=0.289 Sum_probs=185.6
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++..++.. .+...+|+|||+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5788888776421 1124699999999999999999999999999999999998764 4799999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. ..++.+||++|+..+++..||+||+.|....+ ..+..+.++++.++++.+||.+..++.+ ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 13567999999999999999999999875543 2344555667899999999998888764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 999999999986 57788999999986 7899
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.9e-37 Score=363.97 Aligned_cols=206 Identities=23% Similarity=0.338 Sum_probs=178.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999999876432 45799999999999
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.|+.+..+... .+...++.++++.+||.+..|..
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~--- 137 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSY--- 137 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC---
Confidence 99999999998765432110 11223567889999998877754
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
++.|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.+.. +.++++++|+.+.+.++||+|++|
T Consensus 138 --~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 138 --PSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred --hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 45799999999999999999999999999999999999999999999876533 466777899999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999999874
No 82
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=350.88 Aligned_cols=214 Identities=24% Similarity=0.352 Sum_probs=180.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 65 (235)
T cd03261 1 IELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDIS 65 (235)
T ss_pred CeEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35677777653 24699999999999999999999999999999999998653 4799999998754
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
. ..+++.++|++|++.+++.+||+||+.+...... .....+.++.+.++++.+++.+..++.+ ..||
T Consensus 66 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (235)
T cd03261 66 GLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELS 138 (235)
T ss_pred ccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCC
Confidence 2 1245679999999999999999999988643221 1234444567888999999988777654 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
|||||||+||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 139 gG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~ 216 (235)
T cd03261 139 GGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIV 216 (235)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57788999999986 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 217 ~~g~~ 221 (235)
T cd03261 217 AEGTP 221 (235)
T ss_pred EecCH
Confidence 88875
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=368.50 Aligned_cols=206 Identities=25% Similarity=0.368 Sum_probs=179.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+++++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 45999999999999999999999999999999999999998 9999999999876544 4789999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+..+.. ..+...+++++++.+||++..+. .++.
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~-----~~~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDR-----KPRE 134 (356)
T ss_pred HHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhC-----Chhh
Confidence 99999987543211 01123456788999999887764 4457
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+ ..+++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHR-RLKTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998754 3356778889999999999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 84
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.2e-37 Score=365.10 Aligned_cols=207 Identities=23% Similarity=0.328 Sum_probs=180.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCce--eEEEECCeeCCCCCc-cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVS--GRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|+.+|+ + |+|.++|.++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35899999999999999999999999999999999999998 8 999999999865543 46799999999999999
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.|+.+..+.. ..+.+.+++++++.+||++..|.. +
T Consensus 95 tv~enl~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gL~~~~~~~-----~ 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------------------------------KADIAERVADALKLVGLGDAAAHL-----P 135 (362)
T ss_pred cHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCCchhhCC-----h
Confidence 9999999987543211 011233577889999999877754 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 57999999999999999999999999999999999999999999998765332577888999999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999884
No 85
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.6e-37 Score=365.58 Aligned_cols=214 Identities=26% Similarity=0.373 Sum_probs=187.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 478888887653 34689999999999999999999999999999999998763 489999999876
Q ss_pred cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.++.++++++.++|.++.++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999986543 2345566678999999999999888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999987 68899999999997 68899998
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-37 Score=365.85 Aligned_cols=206 Identities=22% Similarity=0.360 Sum_probs=180.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..+++++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999876554 3789999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+.++... .+.+.+++++++.+||.+..+. .++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r-----~~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDR-----YVDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcC-----Chhh
Confidence 999999875433210 1123457788999999877664 4567
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQ-QFNITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3356778899999999999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 87
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2e-37 Score=366.59 Aligned_cols=207 Identities=26% Similarity=0.397 Sum_probs=180.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ +|.++||+|+..++|++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999999876444 4689999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+.++.. ..+.+.+++++++.+||++..|. .+..
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~-----~~~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERK-----YPGQ 134 (353)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhC-----Chhh
Confidence 99999986543211 01123457889999999987774 4557
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+ ..+++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQR-RLGVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3456777889999999999999999999999
Q ss_pred EEecCHHHHHH
Q 000540 404 VYQGPRELVLE 414 (1433)
Q Consensus 404 v~~G~~~~~~~ 414 (1433)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 88
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=365.65 Aligned_cols=214 Identities=25% Similarity=0.357 Sum_probs=185.8
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++..++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECC
Confidence 67888887652 124699999999999999999999999999999999998763 4899999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.. ..++.+|||+|++.++|++||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23467999999999999999999999986543 2344555677899999999999888774 479999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 999999999986 68899999999986 788999986
No 89
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=342.56 Aligned_cols=207 Identities=27% Similarity=0.388 Sum_probs=182.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCC----CCCccceEEEecCCC-CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMD----EFVPERTAAYISQHD-NHIG 239 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1433)
..+|+|+|+.+++|+.++|+||||||||||+++|+|+++|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 56999999999999999999999999999999999999998 899999999865 223467899999994 5678
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.-||.|.++|+.+..+... ++...+++.+++.+||.+.++ +
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~-----r 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLD-----R 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhcc-----C
Confidence 8899999999988776421 123457888999999998877 4
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.+..|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.. .++.++++++|+...+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 5667999999999999999999999999999999999999999999999865 445677889999999999999999999
Q ss_pred CCeEEEecCHHHHHH
Q 000540 400 NGQIVYQGPRELVLE 414 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1433)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 90
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-37 Score=363.02 Aligned_cols=215 Identities=23% Similarity=0.368 Sum_probs=187.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 578889887763 34689999999999999999999999999999999998763 489999999876
Q ss_pred ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
... ..+|.+|||+|+..++|++||+||+.|+...+. .+..+.+++++++++.++|.++.++.+ ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 234679999999999999999999999865432 345566778999999999999888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999987 68899999999997 68888888
Q ss_pred CC
Q 000540 1084 LG 1085 (1433)
Q Consensus 1084 ~~ 1085 (1433)
..
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 91
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.8e-37 Score=359.74 Aligned_cols=215 Identities=27% Similarity=0.371 Sum_probs=186.0
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3588899987763 35699999999999999999999999999999999998764 47999999988
Q ss_pred Ccc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 925 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
... ...++.+||++|+..+++.+||+|++.+.+..+. ....+.++.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665432 233334456788999999998888775 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999877999999999987 67889999999997 6899999
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 92
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-37 Score=314.74 Aligned_cols=196 Identities=26% Similarity=0.341 Sum_probs=172.6
Q ss_pred eeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc-cccceEEEeecCCCCCCCCCHHHHHHH
Q 000540 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLLY 955 (1433)
Q Consensus 877 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 955 (1433)
..+++|++||++||+||||||||||||+|+|...+ .+|+|.|||.+.... ...|-++.++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 67889999999999999999999999999998764 489999999986543 345668999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHH
Q 000540 956 SAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1433)
Q Consensus 956 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1035 (1433)
+..-.+ ..+ .+.++.++.++..+||.++.+++++ .|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643221 223 3445678999999999999999854 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1036 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1036 ~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
++..++.++++ ++.|++++||+|+ +...+.|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999985 4899999999998 78899999999997 799999986
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.1e-37 Score=363.43 Aligned_cols=214 Identities=24% Similarity=0.329 Sum_probs=186.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEE--EEEEEcCc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNIKVSGY 923 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 923 (1433)
.++++|+++++. ...+|+|+|+++++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 478888887763 24699999999999999999999999999999999998664 36 99999998
Q ss_pred cCccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 924 PKKQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 924 ~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
+.... ..+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 76432 23567999999999999999999999986543 2345556677899999999999888874 479999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68889999999986 78899
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9985
No 94
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=329.86 Aligned_cols=206 Identities=27% Similarity=0.319 Sum_probs=177.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC----ccceEEEecCCC--CCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV----PERTAAYISQHD--NHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1433)
.++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 36999999999999999999999999999999999999998 999999998775542 346799999986 567
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
|..||++.|.-+.+..+.+. .+.++.++|+.+||+...- +
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~ 136 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----D 136 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----h
Confidence 88999999987655433211 1223677899999986543 3
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+.+..|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+.+.++|+..-+..+||||+||
T Consensus 137 R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 137 RRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred cCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeee
Confidence 67778999999999999999999999999999999999999999999998765 45677888999999999999999999
Q ss_pred cCCeEEEecCHHHHHH
Q 000540 399 SNGQIVYQGPRELVLE 414 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1433)
++|++++.++.+++..
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999999864
No 95
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-37 Score=313.50 Aligned_cols=201 Identities=24% Similarity=0.369 Sum_probs=174.1
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1433)
..++.|++||++||+||||||||||||.|+|+..|. +|+|.+||.+.+...| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 367889999999999999999999999999999998 9999999999877655 578999999999999999999999
Q ss_pred HhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000540 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQ 328 (1433)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1433)
+|.. ++-+. . .+.++.++.++...||..+.+.. +..|||||
T Consensus 94 LGl~---P~LkL------~-------------------------a~~r~~v~~aa~~vGl~~~~~RL-----P~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKL------N-------------------------AEQREKVEAAAAQVGLAGFLKRL-----PGELSGGQ 134 (231)
T ss_pred ccCC---ccccc------C-------------------------HHHHHHHHHHHHHhChhhHhhhC-----ccccCchH
Confidence 8753 11110 0 01234578889999999888754 45799999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 000540 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGP 408 (1433)
Q Consensus 329 kqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 408 (1433)
||||++||+|+++-+||+||||+|+||+.-+.++...+.+++.+. +.++++++|+.+++.+++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999987654 5566667888899999999999999999999999
Q ss_pred HHHHH
Q 000540 409 RELVL 413 (1433)
Q Consensus 409 ~~~~~ 413 (1433)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98765
No 96
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.7e-37 Score=364.91 Aligned_cols=218 Identities=27% Similarity=0.367 Sum_probs=185.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
..+|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999999876544 4679999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+.++... .+.+.+++++++.+||++..+.. +..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----p~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRK-----PHQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 999999865432110 11223567889999998877754 457
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRK-LGITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 356777799999999999999999999999
Q ss_pred EEecCHHHHHHHHHhcCCCCCCCCChHHHH
Q 000540 404 VYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1433)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1433)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998743 45544445544
No 97
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-37 Score=341.38 Aligned_cols=215 Identities=24% Similarity=0.327 Sum_probs=187.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
-+.++|++|+++. +..+|+|+|+++++|+.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 3678899988742 25799999999999999999999999999999999998764 469999999885
Q ss_pred c----cccccceEEEeecCCCCC-CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 926 K----QETFARISGYCEQNDIHS-PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 926 ~----~~~~~~~~gyv~Q~~~~~-~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
. ....++.+|||+|++... ..-||.|.+.|+..- ...+.++.+++++++++.+++.+++++. +..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccC
Confidence 4 345678899999998654 467999999998643 2455667888999999999999998876 45799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
|||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |+|||++|||.. .+.+.+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999877 789999999987 58888999999997 6889
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 99975
No 98
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.7e-38 Score=394.78 Aligned_cols=207 Identities=29% Similarity=0.421 Sum_probs=173.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1433)
.+|+|+|++|+|||.+||+|+||||||||+|+|+|+++|. +|+|.+||+++++.++ ++.++||+|++ ++++.|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~-~Lf~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDP-FLFSGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccc-hhhcCc
Confidence 5899999999999999999999999999999999999998 9999999999987765 58899999975 566789
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.++.. ....+.+.++++.... + -.+..++..+||.||+.+.
T Consensus 563 I~eNi~l~~p----~~~~e~i~~A~~~ag~---------------------------~--~fI~~lP~gy~t~v~E~G~- 608 (709)
T COG2274 563 IRENIALGNP----EATDEEIIEAAQLAGA---------------------------H--EFIENLPMGYDTPVGEGGA- 608 (709)
T ss_pred HHHHHhcCCC----CCCHHHHHHHHHHhCc---------------------------H--HHHHhcccccccccccCCC-
Confidence 9999998752 2223333333332211 0 1145689999999997665
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|++.. .++|+|+ +.| +..+.+.||+|+||++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~-IaH-Rl~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVII-IAH-RLSTIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEE-EEc-cchHhhhccEEEEccCCc
Confidence 799999999999999999999999999999999999999999998864 3345444 444 467889999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
|+.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 99
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6.5e-37 Score=361.24 Aligned_cols=207 Identities=21% Similarity=0.298 Sum_probs=180.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999999876543 4679999999999
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++++||+||+.|+.+..+... .+...++.++++.+||++..++.
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~-- 126 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRY-- 126 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCC--
Confidence 999999999999875543210 11223567889999998776654
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.++++.+ ..+.++++++|+..++.+++|+|++
T Consensus 127 ---p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~-~~~~Tii~vTHd~~ea~~~~drI~v 202 (363)
T TIGR01186 127 ---PDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQA-TLQKTIVFITHDLDEAIRIGDRIVI 202 (363)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 446999999999999999999999999999999999999999999988754 3356777899999999999999999
Q ss_pred EcCCeEEEecCHHHHHH
Q 000540 398 LSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1433)
|++|++++.|+++++..
T Consensus 203 l~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 203 MKAGEIVQVGTPDEILR 219 (363)
T ss_pred EeCCEEEeeCCHHHHHh
Confidence 99999999999998753
No 100
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-37 Score=339.49 Aligned_cols=210 Identities=27% Similarity=0.391 Sum_probs=175.6
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCc
Confidence 5667776653 24699999999999999999999999999999999997653 47999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000540 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKR 1006 (1433)
Q Consensus 928 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1433)
. ..++.++|++|++.+++.+|++||+.+..... .......++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23457899999998888999999998765432 1223344556789999999988777664 4699999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1007 l~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999986 57788999999997 5666654
No 101
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.7e-38 Score=320.71 Aligned_cols=208 Identities=26% Similarity=0.340 Sum_probs=183.7
Q ss_pred cCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcccc---c-cceEEEeecCCCC
Q 000540 868 SDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQET---F-ARISGYCEQNDIH 943 (1433)
Q Consensus 868 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~---~-~~~~gyv~Q~~~~ 943 (1433)
+++++++++|||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++... . +.-+||+||++..
T Consensus 13 ~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SI 90 (243)
T COG1137 13 SYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASI 90 (243)
T ss_pred hhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchH
Confidence 35677899999999999999999999999999999999998764 3799999999876532 1 2358999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000540 944 SPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1433)
Q Consensus 944 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLD 1023 (1433)
|..+||+||++-....+.. +....+++++++++|+.+++.++++... ..||||||+|+.|||||+.+|+.++||
T Consensus 91 Fr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLD 164 (243)
T COG1137 91 FRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLD 164 (243)
T ss_pred hhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEec
Confidence 9999999999877666532 2334566777899999999999999873 369999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1024 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
||++|+||.+-..|.++++.+.+.|..|++|-|+.. +....|||.+++.+ |+++..|.+.
T Consensus 165 EPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 165 EPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred CCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 999999999999999999999999999999999997 78999999999997 7899999863
No 102
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-37 Score=359.80 Aligned_cols=228 Identities=23% Similarity=0.353 Sum_probs=188.5
Q ss_pred CCCCCcceEEEeceEEEEEEecccccCCChhhhhhHHhhhhhhhhcccCCccccceeecceeEEEeCCeEEEEEcCCCCc
Q 000540 111 GIDLPKVEVRYEHLNIEAEAYIASKALPSFTKFYTSIFEGFLNYLHILPSRKQHLTILKDVSGIIKPGRLTLLLGPPASG 190 (1433)
Q Consensus 111 ~~~~~~v~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsG 190 (1433)
.+..+.=.++|+|++.+-. ++++||+++||+|++|+-+||+|+||||
T Consensus 344 ~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGsG 390 (591)
T KOG0057|consen 344 PIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGSG 390 (591)
T ss_pred CcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCCC
Confidence 5566666799999876521 2345999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHH
Q 000540 191 KTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1433)
Q Consensus 191 KSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 267 (1433)
|||++++|.++++ . +|+|.+||+++++..+ ++.||||||+ .++++.||.+||.+|.. ...++.+.++|
T Consensus 391 KSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn~----sas~eeV~e~~ 461 (591)
T KOG0057|consen 391 KSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGNP----SASDEEVVEAC 461 (591)
T ss_pred HHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCCC----CcCHHHHHHHH
Confidence 9999999999998 4 8999999999987654 5789999995 56667899999999852 33456666777
Q ss_pred HHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCcccee
Q 000540 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFM 347 (1433)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illL 347 (1433)
++.... ++ ...|++.++|.||+++.. |||||||||++|||++.+|+|+++
T Consensus 462 k~a~~h---------------------------d~--i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~~ 511 (591)
T KOG0057|consen 462 KRAGLH---------------------------DV--ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILLL 511 (591)
T ss_pred HHcCcH---------------------------HH--HHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEEe
Confidence 654321 11 446889999999998875 999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHH
Q 000540 348 DEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 348 DEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~ 414 (1433)
|||||+||+.|..++++.+.+. ..++|+|+ +.|. ..+..-||+|++|++|++...|++++++.
T Consensus 512 DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~-IvH~-l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 512 DEATSALDSETEREILDMIMDV--MSGRTVIM-IVHR-LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred cCcccccchhhHHHHHHHHHHh--cCCCeEEE-EEec-chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 9999999999999999999873 23455554 5454 45778899999999999999999999975
No 103
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=359.90 Aligned_cols=216 Identities=25% Similarity=0.377 Sum_probs=185.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++..+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788876652 34699999999999999999999999999999999998663 4799999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.. ..++.+|||+|++.++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987653211 12344555667899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++..++|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68889999999996 78899987
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 5
No 104
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=9.1e-37 Score=339.80 Aligned_cols=207 Identities=23% Similarity=0.320 Sum_probs=174.5
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 567888877631 123699999999999999999999999999999999998653 4799999998753
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. .+++.++|++|++.+++.+||.||+.+....+. ......++.+.++++.+++.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 134679999999998999999999988754321 223344556889999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.||++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999986 567789999999874
No 105
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.4e-37 Score=313.63 Aligned_cols=199 Identities=26% Similarity=0.389 Sum_probs=177.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1433)
..+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|+||+|+||.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 45999999999999999999999999999999999999998 9999999999865432 58899999999999
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+..||.||++|+.+..|.. ..+.+.++.++|+..||.+.++.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~~---- 133 (223)
T COG2884 92 PDRTVYENVALPLRVIGKP----------------------------------PREIRRRVSEVLDLVGLKHKARA---- 133 (223)
T ss_pred ccchHhhhhhhhhhccCCC----------------------------------HHHHHHHHHHHHHHhccchhhhc----
Confidence 9999999999998876542 22345678889999999998874
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
.+..|||||||||+||||++.+|++|+-||||-+||+.++..|++.+.++.+ .+|+|++.+|+..-+..+--+++.|
T Consensus 134 -lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 134 -LPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred -CccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 4568999999999999999999999999999999999999999999998743 4788888899988888888899999
Q ss_pred cCCeEEEec
Q 000540 399 SNGQIVYQG 407 (1433)
Q Consensus 399 ~~G~iv~~G 407 (1433)
++|+++...
T Consensus 211 ~~Grl~~d~ 219 (223)
T COG2884 211 EDGRLVRDE 219 (223)
T ss_pred eCCEEEecc
Confidence 999998754
No 106
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-37 Score=327.97 Aligned_cols=217 Identities=26% Similarity=0.332 Sum_probs=178.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++.+|++..++... ....+|+|||+++.+||.+||+|+||||||||.++|+|..++ ..|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 367788876664321 112599999999999999999999999999999999998764 489999999775
Q ss_pred ccc----cccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCC
Q 000540 926 KQE----TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSG 998 (1433)
Q Consensus 926 ~~~----~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~ 998 (1433)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++.+ +++.++++.+||.+ ..++. +.+
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 432 35778999999985 56889999988644332 2233333 33899999999976 44554 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||||||+||||||+.+|++|+||||||+||+..+.+|+++|.++.++ |.|.|+++||.+ -+..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999765 889999999987 47789999999997 79
Q ss_pred EEEECCCC
Q 000540 1078 EIYVGPLG 1085 (1433)
Q Consensus 1078 ~~y~G~~~ 1085 (1433)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 107
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.7e-37 Score=357.26 Aligned_cols=202 Identities=27% Similarity=0.374 Sum_probs=176.2
Q ss_pred ceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc--ccccceEEEeecCCCCCCCCC
Q 000540 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ--ETFARISGYCEQNDIHSPFVT 948 (1433)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 948 (1433)
++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45799999999999999999999999999999999998663 47999999987643 223567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 949 VYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
|+||+.+.+.++. ....+.++.++++++.++|.+..++.+ +.||||||||++||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 233444556889999999998877764 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 67789999999986 788998875
No 108
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-36 Score=353.33 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=178.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999998999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.|.++..+... .+...+++.+++.++|.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998665433210 0112345778899999988887664
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
+||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+..++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998743 35678888999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998854
No 109
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-36 Score=360.47 Aligned_cols=214 Identities=22% Similarity=0.317 Sum_probs=186.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488899987763 34689999999999999999999999999999999998763 479999999876
Q ss_pred ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
... ..+|.+||++|++.++|.+||+||+.|+...+ ..+..+.++.++++++.++|.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23567999999999999999999999976533 2344555667899999999999888774 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 999999999986 68889999999996 78888887
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 110
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=337.79 Aligned_cols=215 Identities=25% Similarity=0.351 Sum_probs=178.6
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++.. ...+.+|+|+|++|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc
Confidence 467777665310 0114699999999999999999999999999999999998653 47999999987642
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000540 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRL 1007 (1433)
Q Consensus 928 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1007 (1433)
.++.++|++|++.+++.+|++||+.+....+. ......++.++++++.+++.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35678999999988888999999988654331 223344556889999999988777654 46999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEec-CcEEEEECCC
Q 000540 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGYEIYVGPL 1084 (1433)
Q Consensus 1008 ~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~-Gg~~~y~G~~ 1084 (1433)
+|||||+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.||++++|++ .|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 4899999999986 57788999999995 4788887765
No 111
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=335.96 Aligned_cols=209 Identities=25% Similarity=0.410 Sum_probs=176.2
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH
Confidence 5677776652 34699999999999999999999999999999999997653 48999999987643
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000540 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRL 1007 (1433)
Q Consensus 928 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1007 (1433)
..++.++|++|++.+++.+|++||+.+....+. ....+.++.+.++++.+++.+..++.+ ..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 345678999999998899999999988654432 223344556889999999987776653 56999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1008 ~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998777899999999986 56778999999987 5666543
No 112
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-36 Score=352.62 Aligned_cols=214 Identities=28% Similarity=0.366 Sum_probs=182.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 477888887663 34699999999999999999999999999999999997653 479999999875
Q ss_pred cc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
.. ...++.+||++|++.+++.+||+||+.+.+.... .+..+.++.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2235679999999999999999999987554321 233334456788999999988777764 4699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999877999999999987 67788999999986 68889987
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 113
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=337.25 Aligned_cols=213 Identities=28% Similarity=0.367 Sum_probs=179.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecC
Confidence 35677776652 34699999999999999999999999999999999998653 4799999997653
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ...++.++|++|++.+++.+||+|++.+....+. ....+.++.++++++.++|.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 1234578999999998999999999988654431 223334556889999999988777664 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999986 57788999999987 68888776
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 114
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.6e-36 Score=335.47 Aligned_cols=211 Identities=25% Similarity=0.385 Sum_probs=176.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 35677776653 24699999999999999999999999999999999998653 4799999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.. ..++.++|++|++.+++..|++||+.+....+ .....+.++.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 31 12357999999998888999999998865432 1233444556888999999988777664 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999764 899999999986 57788999999987 6777765
No 115
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=357.29 Aligned_cols=217 Identities=23% Similarity=0.285 Sum_probs=183.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++++++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5788888876410 1135799999999999999999999999999999999998763 4799999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. ..++.+||++|++.+++.+||+||+.+....+. ....+.++.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 134679999999999999999999998754431 234444567889999999988777764 5699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57788999999986 7888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98875
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=360.40 Aligned_cols=206 Identities=23% Similarity=0.319 Sum_probs=179.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
..+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+++++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999999865443 4689999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
.||+.|+.+.++.. ..+...+++++++.+||.+..+. .+.+
T Consensus 109 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~~~~-----~~~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEFAKR-----KPHQ 149 (377)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcC-----Chhh
Confidence 99999986543211 01123456788999999876664 4557
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999998876543 56778889999999999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 117
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3e-36 Score=340.33 Aligned_cols=215 Identities=26% Similarity=0.339 Sum_probs=178.5
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCC
Confidence 4677776652 24699999999999999999999999999999999998653 47999999987643
Q ss_pred c---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 928 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------IDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 928 ~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
. . .++.++|++|++.+++.+||+||+.+....+.... ......++.++++++.+++.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 2 1 23458999999999999999999988654321110 012334556889999999987776653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 569999999999999999999999999999999999999999999999877999999999987 57788999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888875
No 118
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=357.07 Aligned_cols=214 Identities=24% Similarity=0.354 Sum_probs=186.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..++ ..|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488899887652 34689999999999999999999999999999999998763 479999999876
Q ss_pred cc-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.. ...+|.+||++|+..++|++||.||+.|....+ ..+..+.++++.++++.++|.+..++.+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234578999999999999999999999976543 2344556677899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.+ .|.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 68899999999986 78889998
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 119
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.9e-37 Score=387.87 Aligned_cols=214 Identities=26% Similarity=0.417 Sum_probs=180.7
Q ss_pred cCCccccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCC
Q 000540 158 LPSRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQH 234 (1433)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1433)
||+| +..+||+|+|++|++|+.+||+|||||||||.+.+|-+.++|+ +|.|.+||+++++.+. |+++|.|+|+
T Consensus 997 YPsR-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQE 1072 (1228)
T KOG0055|consen 997 YPTR-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQE 1072 (1228)
T ss_pred CCCC-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccC
Confidence 5655 4578999999999999999999999999999999999999998 9999999999998876 4789999999
Q ss_pred CCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
|.+| +.|+||||.||.+ . ...+.+.++++.....+ =+.+|++++||
T Consensus 1073 P~LF-~~TIrENI~YG~~--~--vs~~eIi~Aak~ANaH~-----------------------------FI~sLP~GyDT 1118 (1228)
T KOG0055|consen 1073 PVLF-NGTIRENIAYGSE--E--VSEEEIIEAAKLANAHN-----------------------------FISSLPQGYDT 1118 (1228)
T ss_pred chhh-cccHHHHHhccCC--C--CCHHHHHHHHHHhhhHH-----------------------------HHhcCcCcccC
Confidence 8665 5799999999921 1 12334444443332211 15689999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.||+++. +||||||||++||||+++||+||+|||.||+||+++..-+.+.|.+.. .++|+|++- |+..+.+.||.
T Consensus 1119 ~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqnaD~ 1193 (1228)
T KOG0055|consen 1119 RVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNADV 1193 (1228)
T ss_pred ccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcCCE
Confidence 9999887 699999999999999999999999999999999999999999998753 455665543 46788899999
Q ss_pred EEEEcCCeEEEecCHHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~~ 414 (1433)
|+|+++|+|+++|++++++.
T Consensus 1194 I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1194 IAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred EEEEECCEEEecccHHHHHh
Confidence 99999999999999999985
No 120
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=358.80 Aligned_cols=214 Identities=25% Similarity=0.351 Sum_probs=183.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367888887653 34699999999999999999999999999999999998663 479999999876
Q ss_pred ccc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
... ..++.+||++|+..+++.+||+||+.|....+. ....+.++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 431 234679999999999999999999998765431 234445567899999999998877764 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...||++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 67889999999996 78888887
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 121
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=357.51 Aligned_cols=210 Identities=25% Similarity=0.380 Sum_probs=179.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999999865433 3679999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+....... ....+...+++++++.+||++..+. .+..
T Consensus 92 ~eni~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~l~~~~L~~~~~~-----~~~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------------------------------PNAAAIKAKVTQLLEMVQLAHLADR-----YPAQ 136 (353)
T ss_pred HHHHHhhhhhcccccC------------------------------CCHHHHHHHHHHHHHHcCCchhhhC-----Chhh
Confidence 9999998643210000 0001123456788999999877664 4557
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3356778899999999999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 122
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.6e-36 Score=356.19 Aligned_cols=203 Identities=24% Similarity=0.292 Sum_probs=177.9
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc---cc----cceEEEeecCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE---TF----ARISGYCEQNDI 942 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~ 942 (1433)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.++... .+ ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 445799999999999999999999999999999999998763 589999999886532 12 567999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000540 943 HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1433)
Q Consensus 943 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlL 1022 (1433)
++|.+||+||+.|..... ....++.++++.++++.++|.+..++.+ ..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2345556678899999999988888764 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||||++||+.++..+++.++++.++ |+|||++||++. ++...+|++++|++ |+++..|+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 9999999999999999999999754 899999999986 57889999999986 688999875
No 123
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-36 Score=339.08 Aligned_cols=216 Identities=27% Similarity=0.377 Sum_probs=179.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 67888887763 24699999999999999999999999999999999998653 4799999998754
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.. ..++.++|++|++.+++.+||+||+.+....+.. ........++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 32 2245689999999888899999999886543211 00122333456788999999987777654 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999765 899999999986 57788999999986 68888887
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 124
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.5e-36 Score=360.39 Aligned_cols=218 Identities=26% Similarity=0.343 Sum_probs=183.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEc
Confidence 367888887653 35799999999999999999999999999999999998663 479999999876
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.+||++|+..+++.+||+|++.++...... ........++.++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 23467799999999998999999999875422110 01112234567899999999998888764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||+.|||||+++|++|||||||+|||+.++..++++|++++++|+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57789999999986 788899
Q ss_pred CCCC
Q 000540 1082 GPLG 1085 (1433)
Q Consensus 1082 G~~~ 1085 (1433)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9863
No 125
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.2e-36 Score=338.32 Aligned_cols=213 Identities=26% Similarity=0.352 Sum_probs=178.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 65 (232)
T cd03218 1 LRAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDIT 65 (232)
T ss_pred CeEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 35677776653 34699999999999999999999999999999999998653 4799999998753
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
.. . .++.++|++|++.+++.+||+||+.+....+. ......++.++++++.+++.+..++.+ ..||||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 137 (232)
T cd03218 66 KLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGG 137 (232)
T ss_pred cCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHH
Confidence 21 1 23468999999999999999999987643321 223334456788999999988777653 569999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 215 (232)
T cd03218 138 ERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEG 215 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEe
Confidence 999999999999999999999999999999999999999999877999999999986 68889999999986 6888888
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 216 ~~ 217 (232)
T cd03218 216 TP 217 (232)
T ss_pred CH
Confidence 75
No 126
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.2e-36 Score=335.89 Aligned_cols=215 Identities=27% Similarity=0.405 Sum_probs=178.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 5677888766311 0112699999999999999999999999999999999998653 4799999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ..+++.++|++|++.+++.+||+||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 2345679999999988899999999987654331 233444567889999999988777654 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999987 5666543
No 127
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.4e-36 Score=335.75 Aligned_cols=208 Identities=28% Similarity=0.397 Sum_probs=172.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehh
Confidence 3567787765310 0114699999999999999999999999999999999998653 4799999998754
Q ss_pred ccc-------ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000540 927 QET-------FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGL 999 (1433)
Q Consensus 927 ~~~-------~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1433)
... .++.++|++|++.+++.+||+||+.+....+. ......++.++++++.++|.+..++.+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 211 23579999999999999999999998754432 223334556889999999988777654 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1000 SgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
|||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.||++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999976 5899999999986 34 489999999875
No 128
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=321.14 Aligned_cols=207 Identities=24% Similarity=0.374 Sum_probs=173.2
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1433)
+.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+. +-++||||....|+
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 367999999999999999999999999999999999999987 99999999999887653 56999999999999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Ccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTVVGD 318 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vG~ 318 (1433)
+|||+|||..++..... ... . ....|.+.+.+- |.+-.++.-|
T Consensus 92 ~LTVeENL~~g~~~~~~-~~~----------~------------------------~~~~e~v~~lFP~Lker~~~~aG- 135 (237)
T COG0410 92 RLTVEENLLLGAYARRD-KEA----------Q------------------------ERDLEEVYELFPRLKERRNQRAG- 135 (237)
T ss_pred hCcHHHHHhhhhhcccc-ccc----------c------------------------cccHHHHHHHChhHHHHhcCccc-
Confidence 99999999987643211 000 0 000233333332 3333444444
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+ .++.+|+.+.|+.....+++|+.++|
T Consensus 136 ----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 136 ----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred ----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEE
Confidence 5999999999999999999999999999999999999999999999865 34578888999999999999999999
Q ss_pred cCCeEEEecCHHHHHH
Q 000540 399 SNGQIVYQGPRELVLE 414 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1433)
.+|+|++.|+.+++..
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999999864
No 129
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-36 Score=338.63 Aligned_cols=207 Identities=27% Similarity=0.357 Sum_probs=173.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 35999999999999999999999999999999999999988 999999999876532 235799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++.+...... ..+....++.+++.+||++..++.+
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLS---------------------------------EEEIREIVLEKLEAVGLRGAEDLYP-- 134 (235)
T ss_pred CCCcHHHHHHHHHhhccCCC---------------------------------HHHHHHHHHHHHHHcCCchhhcCCh--
Confidence 99999999998643210000 0011234567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|++++|+..++.++||+|++|
T Consensus 135 ---~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 135 ---AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEE
Confidence 469999999999999999999999999999999999999999999987543 3466777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988763
No 130
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.2e-36 Score=349.41 Aligned_cols=212 Identities=24% Similarity=0.361 Sum_probs=182.8
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++.++. ++.+|+|+||++++||++||+|||||||||||++|+|...+ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67788877653 35699999999999999999999999999999999998663 4799999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ...++.+||++|++.+++.+||.||+.+.+.++. ...++.++.++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2235679999999999999999999998765542 233444556889999999998888764 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||++||+||+++|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999987 68889999999986 788999986
No 131
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.8e-36 Score=332.77 Aligned_cols=207 Identities=30% Similarity=0.389 Sum_probs=174.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (208)
T cd03268 1 LKTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQ 65 (208)
T ss_pred CEEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCccc
Confidence 35677776652 24699999999999999999999999999999999998653 4899999998754
Q ss_pred c-ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 927 Q-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 927 ~-~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
. ...++.++|++|++.+++.+||+||+.+....+. . .++.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 133 (208)
T cd03268 66 KNIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQ 133 (208)
T ss_pred chHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHH
Confidence 2 2234578999999988889999999988654321 1 1345778999999988777654 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 134 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 134 RLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998877899999999986 56678999999986 6776654
No 132
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.1e-36 Score=337.19 Aligned_cols=214 Identities=23% Similarity=0.273 Sum_probs=176.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCC-----CCceEEEEEEEc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNIKVS 921 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~ 921 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~ 65 (227)
T cd03260 1 IELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLD 65 (227)
T ss_pred CEEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEEC
Confidence 35677776652 246999999999999999999999999999999999976 4 357999999
Q ss_pred CccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
|.+... ..+++.++|++|++.++ .+||+||+.+....+. .....+.++.++++++.+++.+..+.... +
T Consensus 66 g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~ 139 (227)
T cd03260 66 GKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---A 139 (227)
T ss_pred CEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---c
Confidence 987532 22356799999998887 7999999988654331 11222234567889999999876665421 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||+++ .+.+.||++++|++ |
T Consensus 140 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G 216 (227)
T cd03260 140 LGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-G 216 (227)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999876 99999999986 57788999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 217 ~i~~~g~~ 224 (227)
T cd03260 217 RLVEFGPT 224 (227)
T ss_pred EEEEecCc
Confidence 88888875
No 133
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.6e-36 Score=351.12 Aligned_cols=206 Identities=26% Similarity=0.359 Sum_probs=177.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875421 1357999999999999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.+.++..+... .+...+++++++.+||++..++.+ +
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPV-----G 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCch-----h
Confidence 9999998765433110 011234677899999988777655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|++++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 3 5677888999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998754
No 134
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.2e-36 Score=334.82 Aligned_cols=221 Identities=37% Similarity=0.604 Sum_probs=179.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC-CceEEEEEEEcCccC
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGNIKVSGYPK 925 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 925 (1433)
+.|+|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+..|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4578888776421 013579999999999999999999999999999999999764 123579999999876
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGE-VMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.....++.++|++|++.+++.+||+||+.+......+...........+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544456779999999999999999999998765433222122222334555 88899988776665 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.||++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468899999999997 6777654
No 135
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-36 Score=352.65 Aligned_cols=206 Identities=25% Similarity=0.361 Sum_probs=176.8
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1433)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999998 9999999999865432 35799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++.+..+... .+...+++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 89999999998764432110 011234677899999987776544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .++++++++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 579999999999999999999999999999999999999999999987643 3567777899999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 136
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-36 Score=313.43 Aligned_cols=207 Identities=30% Similarity=0.434 Sum_probs=177.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1433)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||.+++.+.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999887664 5679999998888889
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+|-+.+|+.-.+.+.. ..+...+++.+|...++.+.+. +..
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~-----R~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAG-----RDY 133 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhc-----cch
Confidence 999999998754322111 0122345677788888887765 445
Q ss_pred ccCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 322 RGISGGQRKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~------~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
+.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. +..|+.+.|+..-...+||+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhee
Confidence 6899999999999999974 44689999999999999999999999999874 366777889999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999886
No 137
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-36 Score=357.58 Aligned_cols=206 Identities=27% Similarity=0.393 Sum_probs=177.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998865433 4679999999999999999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.|+.+..+... .+...+++++++.+||++..+..+ ..
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999999865432110 012234677899999987776544 57
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKR-LGRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 356777789999999999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
++.|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 138
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.4e-36 Score=337.45 Aligned_cols=214 Identities=22% Similarity=0.323 Sum_probs=179.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56778877653 2469999999999999999999999999999999999865 34799999998764
Q ss_pred c-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 927 Q-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
. ...++.++|++|++.+++.+||+||+.+...... .....+.++.+.++++.+|+.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 1235579999999988889999999987542111 1233444566889999999987777653 56999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. ++.+.||++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 56778999999986 688898
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 139
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.3e-36 Score=332.46 Aligned_cols=191 Identities=29% Similarity=0.366 Sum_probs=162.2
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCC-CCCCCCHH
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDI-HSPFVTVY 950 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 950 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4699999999999999999999999999999999997653 47999999987643334567999999974 34467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000540 951 ESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1433)
Q Consensus 951 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD 1030 (1433)
||+.+...... . .++.+.++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-----A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543211 1 1245788999999988777764 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++| ++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~G-~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLANG-AI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999777999999999986 567789999999974 54
No 140
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=337.33 Aligned_cols=217 Identities=24% Similarity=0.307 Sum_probs=180.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.. .+...+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4677887765310 0112699999999999999999999999999999999998663 4799999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 124678999999999999999999988654331 233344556889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999986 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 141
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.5e-36 Score=333.06 Aligned_cols=206 Identities=26% Similarity=0.354 Sum_probs=173.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 56778877652 124699999999999999999999999999999999998653 4799999998764
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. .+++.++|++|++.+++.+|+.||+.+....+. ......++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 234679999999988889999999988754321 223334556889999999987666653 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.||++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999875
No 142
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-36 Score=342.95 Aligned_cols=204 Identities=24% Similarity=0.298 Sum_probs=173.4
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc---c----ccceEEEeecCC
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE---T----FARISGYCEQND 941 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~ 941 (1433)
++.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.++|++|++
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4556799999999999999999999999999999999998653 479999999875421 1 135689999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEE
Q 000540 942 IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1021 (1433)
Q Consensus 942 ~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLl 1021 (1433)
.+++.+||+||+.+...... ......++.++++++.++|.+..++.+ ..||||||||++||+||+.+|++||
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~ill 183 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILL 183 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99989999999988654321 223344556889999999988777764 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1022 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1022 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 184 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 184 MDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999998754 899999999986 57788999999986 688888875
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-36 Score=345.17 Aligned_cols=218 Identities=21% Similarity=0.294 Sum_probs=180.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67888888764210 0124699999999999999999999999999999999998663 4899999998864
Q ss_pred cc-----cccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000540 927 QE-----TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK--PLKQSLVGLPGVSG 998 (1433)
Q Consensus 927 ~~-----~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 998 (1433)
.. ..++.+||++|++. .+...||+||+.|..... ....++.++.++++++.+||. +..++. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 31 34567999999863 334579999999865432 234555566789999999997 556655 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||||||++||+||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 56788999999987 78
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 8888875
No 144
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-36 Score=339.43 Aligned_cols=216 Identities=26% Similarity=0.310 Sum_probs=176.2
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccc
Confidence 4667776542 114699999999999999999999999999999999998653 47999999987542
Q ss_pred c------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 928 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 928 ~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
. ..++.++|++|++.+++.+||+||+.+...... .........++.+.++++.+++.+..++.+
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA----- 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----
Confidence 1 234678999999998899999999987532110 001111233456788999999987766653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999987 57779999999996
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 688888875
No 145
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=324.81 Aligned_cols=221 Identities=27% Similarity=0.373 Sum_probs=188.6
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1433)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999998 99999999999887664 3578899999999
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
++|||.||+..++..+.. +...... + ....+..+..+++..+|+.+||.+.+|+..|
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~----------~---------~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~- 148 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGR----------P---------RARKEEREARERARELLEFVGLGELADRPAG- 148 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhcc----------c---------cchhhHHHHHHHHHHHHHHcCCchhhcchhh-
Confidence 999999999998764421 0000000 0 0001123445677889999999999998877
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ ..+.+++.|-|+..-++++||||+||
T Consensus 149 ----~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 149 ----NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred ----cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 4999999999999999999999999999999999999999999998754 45688888999999999999999999
Q ss_pred cCCeEEEecCHHHHHH
Q 000540 399 SNGQIVYQGPRELVLE 414 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1433)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 146
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.7e-37 Score=368.79 Aligned_cols=219 Identities=26% Similarity=0.400 Sum_probs=182.6
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcC
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSG 922 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1433)
....|+|+||+|.|+.. ++.++|+|+||+|+|||.|||+||||+||||+.++|....+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 34579999999999865 35679999999999999999999999999999999998776 4589999999
Q ss_pred ccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH--HH-HcCCcccccccccCCCC
Q 000540 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEV--ME-LVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 923 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~--l~-~l~L~~~~~~~vg~~~~ 996 (1433)
+|+++ ..+++.+|+|.|+|.++. -||+||+.|+.. +.+.++....++.+ -+ ..++.+-.|+.||..|
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG- 602 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG- 602 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCccccccccCCcc-
Confidence 99765 456789999999999985 599999998743 33333322211111 11 1356667889999865
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||||++||+||||||+||.||+++...|.+.|.++.+ ++|||++.|+.| ..+.+|+|+++++ |
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 47999999999999999999999999999999999999999999988864 699999999976 5788999999986 7
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
+++..|.-
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 99999853
No 147
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.3e-35 Score=366.23 Aligned_cols=217 Identities=29% Similarity=0.418 Sum_probs=179.8
Q ss_pred cCCCCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEE
Q 000540 840 LPFEPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIK 919 (1433)
Q Consensus 840 ~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~ 919 (1433)
.+..+..++|+|++|++.. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|+.++ ..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEE
Confidence 3445568999999999863 234699999999999999999999999999999999998764 589999
Q ss_pred EcCccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccc
Q 000540 920 VSGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-------PLKQS 989 (1433)
Q Consensus 920 i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~ 989 (1433)
+||++..+ ..+|+.+|||+|++.++ +-|++||+.++. ++.+.+ .+.++++..|.. .-.++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~-----p~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN-----PEATDE----EIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC-----CCCCHH----HHHHHHHHhCcHHHHHhccccccc
Confidence 99998654 56789999999998876 469999998642 233322 234444444433 33456
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEE
Q 000540 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1069 (1433)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v 1069 (1433)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|+++. +|+|+|+++|+++ ..+.||++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 66654 46899999999999999999999999999999999999999999999985 5899999999986 67899999
Q ss_pred EEEecCcEEEEECCC
Q 000540 1070 FLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1070 ~~L~~Gg~~~y~G~~ 1084 (1433)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99986 799999985
No 148
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.3e-36 Score=344.55 Aligned_cols=204 Identities=21% Similarity=0.242 Sum_probs=153.2
Q ss_pred CceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCc
Q 000540 844 PHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGY 923 (1433)
Q Consensus 844 ~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1433)
|..+.+.+|++.++. +.-+++++++..++.-+..+++|+||+||||+++++.|..++ ..|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc-
Confidence 446888888876542 111689999999999999999999999999999999985542 355555543
Q ss_pred cCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000540 924 PKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 1002 (1433)
+++++|-.|...-+-.+.|.+--.. ...+ |.. . ++.+++-+..+||.. ++... +.+||||
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~vd~~-~~~~-pG~-~----~ee~r~hl~~~Gl~g~la~~s-----i~~LSGG 486 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAVDFM-EKSF-PGK-T----EEEIRRHLGSFGLSGELALQS-----IASLSGG 486 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHHHHH-HHhC-CCC-C----HHHHHHHHHhcCCCchhhhcc-----ccccCCc
Confidence 4568999997654444444433222 2222 111 2 233567788899975 22221 4679999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..||++||+.+. +-..|+++++.++|...-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999876 4579999999763 667899999999877666666
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
..
T Consensus 563 ~~ 564 (582)
T KOG0062|consen 563 GI 564 (582)
T ss_pred cH
Confidence 53
No 149
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=319.04 Aligned_cols=203 Identities=24% Similarity=0.374 Sum_probs=185.3
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCC
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVT 948 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 948 (1433)
.+++.+++||||.++||++++++|+|||||||++++|.|...+ .+|.|.++|.+.++.. +.+|||.|.+..++|.+|
T Consensus 12 Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 12 FGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred cCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 3677899999999999999999999999999999999998773 5899999999987643 456899999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 949 VYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
|.|.|.|-|.++. ++.++.+..++.+|+.+++......++ +.||.|++|++.+-.+++++|++++||||+||
T Consensus 89 v~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSG 160 (300)
T COG4152 89 VEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSG 160 (300)
T ss_pred HHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccC
Confidence 9999999998864 567777788999999999999887774 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|||.+.+.+.+.+.+++++|.|||+++|+++ .+-++||++++|++ |+.|.+|++
T Consensus 161 LDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 161 LDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred CChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 9999999999999999999999999999997 68899999999987 678888886
No 150
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.2e-36 Score=331.30 Aligned_cols=205 Identities=25% Similarity=0.365 Sum_probs=172.3
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEccc
Confidence 4677776652 124699999999999999999999999999999999997653 47999999987532
Q ss_pred c------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 928 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 928 ~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
. ..++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 234679999999999999999999988654332 233444556889999999988777653 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.||++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999998777999999999986 566789999999874
No 151
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=9.5e-36 Score=332.61 Aligned_cols=214 Identities=24% Similarity=0.380 Sum_probs=178.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 356777766531 114699999999999999999999999999999999998653 4799999998764
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ..+++.++|++|++.+++.+|++||+.+....+. ....+.++.++++++.++|.+..++.+ ..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345679999999988889999999988654432 223334456789999999987777653 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999987 56778999999986 688888875
No 152
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=336.94 Aligned_cols=213 Identities=26% Similarity=0.356 Sum_probs=177.9
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++. .+.+|+|+|++|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 56777766531 14699999999999999999999999999999999998653 47999999987532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000540 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP--LKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 928 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgG 1002 (1433)
...++.++|++|++.+++.+||+||+.+....+. .+....++.+.++++.+++.+ ..++. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2334578999999999999999999988654321 233444556889999999985 55554 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999986 57788999999997 688888
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 153
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-35 Score=337.83 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=179.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67888887653 24699999999999999999999999999999999998653 4799999998653
Q ss_pred c-----------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000540 927 Q-----------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPG 995 (1433)
Q Consensus 927 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1433)
. ...++.++|++|++.+++..|+.||+.+...... ....+..++.++++++.+++.+..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1234578999999988889999999987543211 123344456688899999998776665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.||++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999986 57788999999986
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 688888874
No 154
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.5e-36 Score=333.15 Aligned_cols=211 Identities=28% Similarity=0.414 Sum_probs=174.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcC
Confidence 35677776542 34699999999999999999999999999999999998653 4799999998754
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000540 927 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELV-ELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. . .++.++|++|++.+++.+|++||+.+...... ..+.+..+.++++.+ ++.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 31 1 24568999999999999999999988654321 122334566778887 466655654 356999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57788999999986 688888
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 874
No 155
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.2e-36 Score=339.34 Aligned_cols=217 Identities=25% Similarity=0.270 Sum_probs=176.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 45677776542 124699999999999999999999999999999999998653 4799999998753
Q ss_pred c------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000540 927 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEIDSETRKMFIGEVMELVELKPLKQSLVGLPG 995 (1433)
Q Consensus 927 ~------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1433)
. ..+++.++|++|++.+++.+||+||+.+...... .........++++.++++.+++.+..++.+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 1235679999999988999999999976421100 001112233456788999999987766653
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 579999999999999999999999999999999999999999999998754 899999999986 56788999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 678888875
No 156
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=331.67 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=178.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEc
Confidence 37889998876411 0114699999999999999999999999999999999998653 489999999876
Q ss_pred cccc------c-cceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000540 926 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSG 998 (1433)
Q Consensus 926 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1433)
.... . ++.++|++|++.+++.+|++||+.+....+ .....+.++.++++++.++|.+..++.+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4311 1 256899999998889999999998865432 1223344567889999999988776653 56
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++++ +|+|||++||+++ ++ +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999986 34 44689999986 68
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 8888875
No 157
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=335.89 Aligned_cols=212 Identities=25% Similarity=0.341 Sum_probs=177.8
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56778876652 24699999999999999999999999999999999998653 4799999998764
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000540 927 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKR 1006 (1433)
Q Consensus 927 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1433)
. ..+.+||++|++.+++.+||.||+.+....+ .....+.++.+.++++.++|.+..++.+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345799999998888899999998764432 1233344556889999999987766653 5699999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEec-CcEEEEECCC
Q 000540 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGYEIYVGPL 1084 (1433)
Q Consensus 1007 l~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~-Gg~~~y~G~~ 1084 (1433)
++||++|+.+|++|||||||+|||+.++..+.+.|+++++ +|+|||++||++. .+.+.||++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999987 57788999999985 5788887764
No 158
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=340.92 Aligned_cols=215 Identities=25% Similarity=0.334 Sum_probs=180.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ +...+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 377888887763 123599999999999999999999999999999999997653 479999999876
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.+||++|++. .++..||.||+.|..... .......++.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223457999999863 445689999998864321 2334444556889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.||++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46788999999986 688888
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 885
No 159
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.3e-35 Score=339.00 Aligned_cols=215 Identities=20% Similarity=0.293 Sum_probs=180.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|||+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478899987753 34699999999999999999999999999999999998653 479999999875
Q ss_pred ccc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000540 926 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGL 999 (1433)
Q Consensus 926 ~~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1433)
... ..++.++|++|+..+++.+||.||+.+...... ..+....+..+.++++.+++.+..++.+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 124568999999988899999999987543211 1223334456788999999988777654 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 1000 SgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.||++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999986 788
Q ss_pred EEECCC
Q 000540 1079 IYVGPL 1084 (1433)
Q Consensus 1079 ~y~G~~ 1084 (1433)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 888875
No 160
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.33 Aligned_cols=218 Identities=26% Similarity=0.395 Sum_probs=179.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC-CC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN-HI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1433)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 45999999999999999999999999999999999999998 999999999986532 2367999999853 45
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc--ccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTVV 316 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1433)
...||+||+.|+....+.. ..+...+++++++.+||+ +..|
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~--- 139 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKD--- 139 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhcc---
Confidence 5689999999865432210 011223467889999996 4445
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+.++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++|++++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 140 --KSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHK-EYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred --CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 44567999999999999999999999999999999999999999999998754 335677888999999999999999
Q ss_pred EEcCCeEEEecCHHHHHH---HHHhcCCCCCC
Q 000540 397 LLSNGQIVYQGPRELVLE---FFESMGFKCPK 425 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1433)
+|++|++++.|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23445655544
No 161
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.5e-35 Score=348.83 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=177.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|+..+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999876432 2467999999988889999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.|.....+... .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999987554332100 0112235667889999988887665
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
+||||||||++||+||+++|++|+|||||+|||+.++.++.+.|+++.. . +.+|++++|+..++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 3 5677888999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
++++|+++++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 162
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=343.60 Aligned_cols=218 Identities=24% Similarity=0.301 Sum_probs=179.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
+.++|+++.++.. ......+|+|||++|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 6788999887421 00123599999999999999999999999999999999998664 3699999886531
Q ss_pred ---------------------------cccccceEEEeecCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000540 927 ---------------------------QETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVM 978 (1433)
Q Consensus 927 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l 978 (1433)
....++.+|||+|++ ..+...||+|++.|..... ....++.++++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112356799999985 3344579999999865432 234555566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000540 979 ELVELK-PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1057 (1433)
Q Consensus 979 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1057 (1433)
+.+||. +..++. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566665 35799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1058 PSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1058 ~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+. .+.+.||++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 57789999999986 688999885
No 163
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.5e-35 Score=329.30 Aligned_cols=205 Identities=24% Similarity=0.340 Sum_probs=172.2
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ .+.+|+++|+++++|++++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 5677776653 24699999999999999999999999999999999998653 47999999987531
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 928 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 928 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
...++.++|++|++.+++.+|+.||+.+...... ....++.++.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2245679999999998999999999987643111 1223344556788999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877899999999986 577889999999874
No 164
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=315.69 Aligned_cols=204 Identities=27% Similarity=0.378 Sum_probs=172.4
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCCCCC
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQNDIHS 944 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~ 944 (1433)
+++.++|+|||+++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++... ..++-++||||....|
T Consensus 13 YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 13 YGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred ccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 3567899999999999999999999999999999999998763 379999999987542 2455699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000540 945 PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVE-LKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLD 1023 (1433)
|.+||+|||..++..+.. ++..+..++++.+.+- |.+.+++..| .|||||||.++|||||+.+|++|+||
T Consensus 91 ~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLD 161 (237)
T COG0410 91 PRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLD 161 (237)
T ss_pred hhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEec
Confidence 999999999987655422 1111222667777763 6666676655 59999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|||.||-|.-.+.|.++|+++.++ |.||+.+-++.. ...+.+||.++|.+ |++++.|+..
T Consensus 162 EPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 162 EPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred CCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 999999999999999999999865 779999988876 47789999999996 7999999863
No 165
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=327.95 Aligned_cols=209 Identities=33% Similarity=0.478 Sum_probs=174.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccc
Confidence 35677776652 246999999999999 9999999999999999999998653 4799999998754
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ...++.++|++|++.+++.+||.||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 3 1235678999999999999999999988654431 223333456789999999988777654 56999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999976 599999999986 46678999999997 5766554
No 166
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=342.68 Aligned_cols=218 Identities=24% Similarity=0.291 Sum_probs=179.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++... .....+|+|||++|++||+++|+||||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889998874210 0124599999999999999999999999999999999998653 4799999998763
Q ss_pred c-------ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 Q-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
. ...++.+|||+|++. .+...||+||+.|+.... ....++.++.++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 134567999999863 233579999999875432 233444456789999999996 556655 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
.||||||||++||++|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999764 899999999987 57788999999986 7
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 88999875
No 167
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=327.39 Aligned_cols=224 Identities=23% Similarity=0.329 Sum_probs=195.3
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1433)
....-++|+|++|+.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++...+. ++.+++|+|+.
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 3345789999999999999999999999999999999999998 9999999999876543 36799999999
Q ss_pred CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000540 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTV 315 (1433)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1433)
.++|+.||.||..||.+.+|++.. +.+.++.+.|+..||+..++.
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~- 160 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADK- 160 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhc-
Confidence 999999999999999999887431 233456778999999998885
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
++++||||+||||.|||||+.+|+||+||||+|+|||--+.++.+.|.++-.. -+.+|+.++|+.+|.+++.|||
T Consensus 161 ----yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~-l~KTIvFitHDLdEAlriG~rI 235 (386)
T COG4175 161 ----YPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAK-LKKTIVFITHDLDEALRIGDRI 235 (386)
T ss_pred ----CcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHH-hCCeEEEEecCHHHHHhccceE
Confidence 45679999999999999999999999999999999999999999888776544 4567788999999999999999
Q ss_pred EEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 000540 396 ILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~ 437 (1433)
.+|.+|+||..|+++|++. .|...-+++|...+.
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v~ 269 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNVD 269 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcCC
Confidence 9999999999999999964 466666777777653
No 168
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=341.32 Aligned_cols=218 Identities=26% Similarity=0.333 Sum_probs=179.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 6788999887411 00113599999999999999999999999999999999998653 4799999998863
Q ss_pred c-------ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 Q-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
. ..+++.+||++|++. .+...||.|++.|..... ..+..+.++++.++++.++|. +..++. +.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PF 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cc
Confidence 1 124567999999862 333469999999875432 234455566788999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~ 221 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GH 221 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999986 57788999999986 78
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 222 i~~~g~~ 228 (288)
T PRK13643 222 IISCGTP 228 (288)
T ss_pred EEEECCH
Confidence 8999986
No 169
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=344.96 Aligned_cols=218 Identities=24% Similarity=0.333 Sum_probs=179.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 589999998874210 0123599999999999999999999999999999999998663 479999999765
Q ss_pred cc-------------------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000540 926 KQ-------------------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK 984 (1433)
Q Consensus 926 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 984 (1433)
.. ...++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3454 59999998864321 233444456788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 000540 985 -PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1063 (1433)
Q Consensus 985 -~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~ 1063 (1433)
+..++. +..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455554 3579999999999999999999999999999999999999999999998777999999999986 467
Q ss_pred HhcCEEEEEecCcEEEEECCC
Q 000540 1064 EAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1064 ~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+.||++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 788999975
No 170
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=330.59 Aligned_cols=205 Identities=27% Similarity=0.377 Sum_probs=173.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHIG 239 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1433)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 9999999998764321 357999999988888
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+|++||+.++....+... .+....++.+++.+||++..+..
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 137 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAY---- 137 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcC----
Confidence 8999999988654321100 01122456788999998776654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ..++++++++|+..++.+++|++++|+
T Consensus 138 -~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 138 -PAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINR-ELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999998754 335677778888889999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988763
No 171
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4e-35 Score=335.21 Aligned_cols=215 Identities=21% Similarity=0.255 Sum_probs=179.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 478889887763 24699999999999999999999999999999999998653 479999999765
Q ss_pred cc----------------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000540 926 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLK-Q 988 (1433)
Q Consensus 926 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 988 (1433)
.. ..+++.++|++|++.+++.+||+||+.+...... .......++++.++++.+|+.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1235679999999999999999999987542111 123344556788999999998753 4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCE
Q 000540 989 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1068 (1433)
Q Consensus 989 ~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~ 1068 (1433)
+. +..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 3579999999999999999999999999999999999999999999999877999999999986 56778999
Q ss_pred EEEEecCcEEEEECCC
Q 000540 1069 LFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1069 v~~L~~Gg~~~y~G~~ 1084 (1433)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999987 688888875
No 172
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=328.25 Aligned_cols=200 Identities=28% Similarity=0.421 Sum_probs=168.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 35999999999999999999999999999999999999987 9999999998764332 3579999999888889999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.++....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03259 90 AENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HE 130 (213)
T ss_pred HHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 999988653221100 001123567788999987666544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|++++|+..++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987543 356677788999999999999999999999
Q ss_pred EEec
Q 000540 404 VYQG 407 (1433)
Q Consensus 404 v~~G 407 (1433)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 173
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-35 Score=330.00 Aligned_cols=199 Identities=27% Similarity=0.414 Sum_probs=163.7
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCC--CCCCH
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHS--PFVTV 949 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 949 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 4799999998654 2356789999998763 34899
Q ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000540 950 YESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1433)
Q Consensus 950 ~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsg 1028 (1433)
+||+.+....... .....+..++.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00111233456889999999987777654 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999777899999999986 57788999999975 4 55544
No 174
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-35 Score=308.02 Aligned_cols=216 Identities=26% Similarity=0.380 Sum_probs=182.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
|+.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|...+ ..|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 56678888863 46799999999999999999999999999999999997653 3799999999875
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
. ....+.-+..||+..+....||+|-+.++..-... .....+..+.++++|...++.+++.+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 23456679999999988789999999987532211 1122244456789999999999887753 5699999
Q ss_pred HHHHHHHHHHhh------CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 1004 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 1004 rqRl~iA~aL~~------~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...+||||++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 456999999999999999999999999999999999999999985 6788999999996 79
Q ss_pred EEEECCCC
Q 000540 1078 EIYVGPLG 1085 (1433)
Q Consensus 1078 ~~y~G~~~ 1085 (1433)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999874
No 175
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-35 Score=328.97 Aligned_cols=205 Identities=29% Similarity=0.378 Sum_probs=173.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 35999999999999999999999999999999999999988 999999998865321 1357999999988888999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.+..+..+... .+....++.+++.+||++..++.+ +
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----K 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----h
Confidence 9999998654322100 011234677899999987766554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+..++.+++|++++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999987543 24567778999999999999999999999
Q ss_pred EEEecCHHHH
Q 000540 403 IVYQGPRELV 412 (1433)
Q Consensus 403 iv~~G~~~~~ 412 (1433)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987753
No 176
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4.1e-35 Score=333.21 Aligned_cols=214 Identities=23% Similarity=0.299 Sum_probs=176.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSGY 923 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1433)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788877653 246999999999999999999999999999999999976531 12799999998
Q ss_pred cCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000540 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK----PLKQSLVGLP 994 (1433)
Q Consensus 924 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 994 (1433)
+... ...++.++|++|++.+++ .|++||+.+....+. .....+.++.++++++.+++. +..++.
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 123567999999988888 999999988654431 122334455688999999997 444544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999876 489999999986 57788999999997
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 688888875
No 177
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.6e-35 Score=330.98 Aligned_cols=217 Identities=24% Similarity=0.273 Sum_probs=171.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|...+ ..|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 5677887765310 0013699999999999999999999999999999999998653 4799999998764
Q ss_pred c------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 Q------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
. ..+++.++|++|++ .+.+.+||+||+.+........ ......+..++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 13456799999998 4567899999998765433211 11111122235788999985 4555543 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 69999999999999999999999999999999999999999999999765 899999999986 56678999999986 5
Q ss_pred EEEEEC
Q 000540 1077 YEIYVG 1082 (1433)
Q Consensus 1077 ~~~y~G 1082 (1433)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 666544
No 178
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-35 Score=328.19 Aligned_cols=193 Identities=26% Similarity=0.372 Sum_probs=163.0
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc---ccccceEEEeecCCC-CCCCC
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ---ETFARISGYCEQNDI-HSPFV 947 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 947 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999997653 47999999987542 224567899999974 36678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000540 948 TVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1433)
Q Consensus 948 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTs 1027 (1433)
|++||+.+....+ .......++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764332 1223334456788999999987766653 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
|||+.++..+.+.|++++++|+|||++||++. ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 567789999999875
No 179
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.5e-35 Score=328.43 Aligned_cols=206 Identities=24% Similarity=0.317 Sum_probs=172.8
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 56778877652 124699999999999999999999999999999999998653 4799999998753
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. .+++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567899999998888999999998865432 1233344456788999999987766653 5699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++|
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~G 213 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSDG 213 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999777899999999987 567789999999974
No 180
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=333.31 Aligned_cols=214 Identities=27% Similarity=0.365 Sum_probs=179.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 66778876652 34699999999999999999999999999999999998653 4799999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
.. ..++.++|++|++.+++.+||.||+.+....+. ....++.+..++++++.+++.+..+..+ +.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 21 134568999999988888999999987543321 1223344566889999999987666553 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.+++++++|+|||+++|++. ++.+.||++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 57788999999986 6888888
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 181
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=339.47 Aligned_cols=215 Identities=27% Similarity=0.381 Sum_probs=180.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ +++.+|+|||++|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 588999998763 124699999999999999999999999999999999998653 479999999876
Q ss_pred cc-----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000540 926 KQ-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGL 999 (1433)
Q Consensus 926 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1433)
.. ..+++.+||++|++. .+...||+||+.+..... ..+..+.++.++++++.++|.+..++.+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 234567999999874 234589999998764322 2234444567889999999988777764 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 1000 SgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
|||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999986 46678999999987 688
Q ss_pred EEECCC
Q 000540 1079 IYVGPL 1084 (1433)
Q Consensus 1079 ~y~G~~ 1084 (1433)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999986
No 182
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=317.43 Aligned_cols=208 Identities=27% Similarity=0.355 Sum_probs=180.5
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcccc----ccceEEEeecCCCCC
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQET----FARISGYCEQNDIHS 944 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~ 944 (1433)
.+...+++|||+++++||+++|+||||||||||+|+|+|..++ ..|+|.++|.++.... .+.-++.-+|...++
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3677899999999999999999999999999999999998764 4799999999875422 234578899999999
Q ss_pred CCCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000540 945 PFVTVYESLLYSAWLRL--------PPE-IDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVA 1015 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~ 1015 (1433)
+.+||.||+..++..+. +.. ...++..+++.++|+.+||.+.+|...| +||+||||||.|||||+.
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~ 166 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALAT 166 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhc
Confidence 99999999998755331 111 1234556678899999999999999865 599999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1016 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1016 ~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-||++ -++.+||||+||+. |+++..|++.
T Consensus 167 ~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 167 QPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 99999999999999999999999999999874 799999999998 48999999999986 7899999874
No 183
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-35 Score=350.77 Aligned_cols=206 Identities=29% Similarity=0.426 Sum_probs=167.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1433)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+.++... +++++||+|++. ++..|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~-lf~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPY-LFAGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCc-ccccc
Confidence 6899999999999999999999999999999999999998 9999999999887654 588999999874 55679
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
+||||.++... ...+.+.++.++. .+.+.+.-++..||.+|+.+ +
T Consensus 411 ireNi~l~~~~----~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARPD----ASDEEIIAALDQA------------------------------GLLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCCc----CCHHHHHHHHHHh------------------------------cHHHhhcCCCcccchhccCC-C
Confidence 99999997521 1111111111110 11222233567799999755 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
+|||||+|||++||||+++++++++||||++||.+|+..|.+.|.++++ .+++++++|. .+...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~---~ktvl~itHr-l~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK---QKTVLVITHR-LEDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh---CCeEEEEEcC-hHHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999998764 3455556554 55667899999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999864
No 184
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-35 Score=336.79 Aligned_cols=207 Identities=23% Similarity=0.324 Sum_probs=175.1
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1433)
.+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 356999999999999999999999999999999999999987 9999999998754321 246999999988
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
+++.+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCc
Confidence 8889999999998754322100 011224567889999987777655
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.++++++|+..++.+++|+++
T Consensus 159 -----~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~ 232 (269)
T cd03294 159 -----DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIA 232 (269)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEE
Confidence 469999999999999999999999999999999999999999999987643 35667778889899999999999
Q ss_pred EEcCCeEEEecCHHHHH
Q 000540 397 LLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++++.|+++++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 185
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=310.47 Aligned_cols=209 Identities=21% Similarity=0.353 Sum_probs=180.9
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc----ceEEEecCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1433)
++++++|||+.+++||+++++|||||||||...++.|+.+|+ +|+|.+||.+++.+... .-+||+||+...|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 457999999999999999999999999999999999999999 99999999999877553 35899999999999
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+||+|||.-..+.+.... ...+.+.+.+.+|+.++|.|++++.-
T Consensus 93 ~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a--- 137 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKA--- 137 (243)
T ss_pred cCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCcc---
Confidence 9999999987665432110 00122345788999999999998643
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
-.||||||+|+-|||||+.+|+.++||||++|+||.+..+|.+.++.+.. .+.-|++.-|.-.|+..++||.++++
T Consensus 138 --~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 138 --YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYIIS 213 (243)
T ss_pred --cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEEe
Confidence 36999999999999999999999999999999999999999999988754 35566667889999999999999999
Q ss_pred CCeEEEecCHHHHHH
Q 000540 400 NGQIVYQGPRELVLE 414 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1433)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999999864
No 186
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.5e-35 Score=329.87 Aligned_cols=212 Identities=28% Similarity=0.394 Sum_probs=176.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 46677776652 34699999999999999999999999999999999998653 4799999998753
Q ss_pred cc--cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~~--~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
.. ...+.++|++|++.+++.+|++||+.+....+ ........+.+.++++.+++.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22346899999998888999999998765432 1223334456788999999987776654 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++ ++ +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 34 45999999986 67888876
Q ss_pred C
Q 000540 1084 L 1084 (1433)
Q Consensus 1084 ~ 1084 (1433)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 187
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.6e-35 Score=343.10 Aligned_cols=230 Identities=20% Similarity=0.233 Sum_probs=184.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
-++++|++..++............+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 488899987775321000000011235799999999999999999999999999999999998763 479999999876
Q ss_pred ccc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000540 926 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGV 996 (1433)
Q Consensus 926 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1433)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 578899999999886543211 234555667788999999994 345554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
..||||||||++|||||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999986 57778999999986
Q ss_pred cEEEEECCCC
Q 000540 1076 GYEIYVGPLG 1085 (1433)
Q Consensus 1076 g~~~y~G~~~ 1085 (1433)
|+++..|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 7899999853
No 188
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=333.65 Aligned_cols=206 Identities=22% Similarity=0.272 Sum_probs=175.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 488999988763 24699999999999999999999999999999999998653 479999998764
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
. ..++.++|++|++.+++.+||+||+.+... . ..+..+.++++.++|.+..++.+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235678999999988888999999987421 0 12345778999999988776653 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|++|||+|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|||++||+++ .+.+.||++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 56788999999986 678887764
No 189
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.6e-35 Score=342.87 Aligned_cols=206 Identities=26% Similarity=0.384 Sum_probs=174.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999999988 999999999875322 2467999999988888999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.+..+..+... .+....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543321100 0011235667889999887776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998754 3 5677888999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999998754
No 190
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=339.32 Aligned_cols=216 Identities=24% Similarity=0.304 Sum_probs=181.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++.. +.+.+|+|+|++|++||++||+|+||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37889998876421 123599999999999999999999999999999999998653 479999999876
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999973 667789999998865332 2344455567899999999998777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||++. ++ ..||++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 34 67999999986 68888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 191
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=339.93 Aligned_cols=218 Identities=22% Similarity=0.318 Sum_probs=178.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|...+ ..|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367889988874210 0123599999999999999999999999999999999998663 479999999876
Q ss_pred cc-------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000540 926 KQ-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPG 995 (1433)
Q Consensus 926 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 995 (1433)
.. ...++.+|||+|++ .+++ .||+||+.|..... ..+..+.++.+.++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 12456799999986 3444 59999998864332 234445556788999999996 566654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|++
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999975 4899999999986 57788999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 688888875
No 192
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=337.16 Aligned_cols=217 Identities=23% Similarity=0.329 Sum_probs=177.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCC-CCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD-NHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1433)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999998 9999999999865322 35799999986 36778
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.|+.+..+.. ..+...+++++++.+||++..+..
T Consensus 97 ~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~----- 137 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------------------------------HEEMKERVNEALELVGMQDFKERE----- 137 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCC-----
Confidence 89999999875432211 011223467789999998766654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+..++ ..+|+|++|++
T Consensus 138 ~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 138 PARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999987543 356677778888887 58999999999
Q ss_pred CeEEEecCHHHHHH---HHHhcCCCCCC
Q 000540 401 GQIVYQGPRELVLE---FFESMGFKCPK 425 (1433)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1433)
|+++..|+++++.. .++..|+.+|.
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIPF 243 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCcH
Confidence 99999999988753 34445555444
No 193
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=340.80 Aligned_cols=218 Identities=23% Similarity=0.352 Sum_probs=177.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-------CccceEEEecCCC-C
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-N 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1433)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999988 99999999987531 1135799999985 2
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1433)
.+...||+||+.|+.+..+.. ..+...+++.+++.+||+ +..++
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 141 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLAR- 141 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhhC-
Confidence 455679999999875432211 011123467789999996 44554
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+..++.++||+|
T Consensus 142 ----~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~-~~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 142 ----SPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHK-EKGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEE
Confidence 3457999999999999999999999999999999999999999999998754 33567778899999999999999
Q ss_pred EEEcCCeEEEecCHHHHH---HHHHhcCCCCCC
Q 000540 396 ILLSNGQIVYQGPRELVL---EFFESMGFKCPK 425 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 425 (1433)
++|++|++++.|+++++. +.+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999998874 234444555444
No 194
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.2e-35 Score=331.05 Aligned_cols=215 Identities=26% Similarity=0.371 Sum_probs=174.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2459999999889999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++....+.. . .... . .. ....+....++++++.+||++..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~-~------~~~~---~---~~-----------~~~~~~~~~~~~~l~~~~l~~~~~~~----- 140 (236)
T cd03219 90 LTVLENVMVAAQARTGS-G------LLLA---R---AR-----------REEREARERAEELLERVGLADLADRP----- 140 (236)
T ss_pred CCHHHHHHHHHhhcccc-c------cccc---c---cc-----------ccHHHHHHHHHHHHHHcCccchhhCC-----
Confidence 99999999875432100 0 0000 0 00 00011223467789999998766644
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+++|+|++|++
T Consensus 141 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 141 AGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 457999999999999999999999999999999999999999999998754 3 55677788999999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 195
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=339.17 Aligned_cols=224 Identities=26% Similarity=0.376 Sum_probs=182.7
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-------CccceEEEecCCC-CC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-NH 237 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1433)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987521 1235799999985 24
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-cccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTVV 316 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1433)
+...||.||+.|+.+..+.. ..+...+++++++.+||.+ ..+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~--- 139 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------------------------------KEKAEKIAAEKLEMVGLADEFWE--- 139 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhcc---
Confidence 45579999999976543211 0112234677889999963 444
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|++++|+..++.++||+|+
T Consensus 140 --~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 140 --KSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred --CCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 34567999999999999999999999999999999999999999999988753 3 5677888999999999999999
Q ss_pred EEcCCeEEEecCHHHHH---HHHHhcCCCCCCCCChHHHH
Q 000540 397 LLSNGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad~l 433 (1433)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999875 34566777777655544444
No 196
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.9e-35 Score=332.93 Aligned_cols=214 Identities=23% Similarity=0.298 Sum_probs=178.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35778887663 24699999999999999999999999999999999998653 4799999998653
Q ss_pred c----------------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000540 927 Q----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSL 990 (1433)
Q Consensus 927 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 990 (1433)
. ...++.++|++|++.+++..|+.||+.+..... ........++.+.++++.+++.+..++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1123344455688999999998777665
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1069 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v 1069 (1433)
+ ..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||++. ++...+|++
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3 579999999999999999999999999999999999999999999998764 899999999986 577889999
Q ss_pred EEEecCcEEEEECCC
Q 000540 1070 FLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1070 ~~L~~Gg~~~y~G~~ 1084 (1433)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99987 688888875
No 197
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=7.5e-35 Score=325.95 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=176.0
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|++..++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667766542 3469999999999999999999999999999999999765 347999999987543
Q ss_pred ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000540 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRL 1007 (1433)
Q Consensus 928 ~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1007 (1433)
.. .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.+++.+..++.+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2568999999988888999999987654331 11 234678999999988777653 46999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1008 ~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
+|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||++. ++.+.||++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999777999999999986 57788999999986 6888988864
No 198
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=330.81 Aligned_cols=210 Identities=28% Similarity=0.384 Sum_probs=173.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999987 9999999998754332 3579999999888888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.++....+...+. + ..+....++.+++.+||++..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERP-------------------P-----------EAEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhccccccC-------------------C-----------HHHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 99999875432110000 0 0011224567889999987666544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+.++++++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999987643 245677788888889999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 199
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.1e-35 Score=330.70 Aligned_cols=219 Identities=22% Similarity=0.246 Sum_probs=175.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35677777653 34699999999999999999999999999999999997411135799999998754
Q ss_pred cc---cc-cceEEEeecCCCCCCCCCHHHHHHHHHHhcCCC----CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 QE---TF-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP----EIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~~---~~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
.. .. +..++|++|++.+++.+|++|++.+........ .....+..+.+.++++.++|. +..++.++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 11 234899999999999999999998764322110 012233345678899999997 45555432 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~-~D~v~~L~~Gg 1076 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877899999999986 46666 799999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 88888875
No 200
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=330.92 Aligned_cols=212 Identities=22% Similarity=0.321 Sum_probs=176.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
-++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 377888887753 24699999999999999999999999999999999998653 479999999875
Q ss_pred ccc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000540 926 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELV-ELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 926 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 1000 (1433)
... ..++.++|++|+..+++.+||.||+.+..... .....++.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 13456999999999899899999998754221 1122234566777777 466555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
||||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 57889999999997 68889
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9875
No 201
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=330.99 Aligned_cols=216 Identities=23% Similarity=0.266 Sum_probs=177.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSGY 923 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1433)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887653 246999999999999999999999999999999999976421 35899999998
Q ss_pred cCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCCCC
Q 000540 924 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGLPGV 996 (1433)
Q Consensus 924 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~~ 996 (1433)
++.. ..+++.+||++|++.+++.+||.||+.+....+.. .....+.++.++++++.++|.+ ..++. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7542 23456799999999888899999999886543211 1122334556889999999864 23333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ .+.+.||++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999864 899999999986 57788999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 88888875
No 202
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-35 Score=330.31 Aligned_cols=213 Identities=23% Similarity=0.315 Sum_probs=178.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
+.++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 67788887653 24699999999999999999999999999999999998653 4799999998642
Q ss_pred ---------cccccceEEEeecCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 927 ---------QETFARISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 927 ---------~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
....++.++|++|++.+++.+||.||+.+. .... .....+..+.+.++++.+|+.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 012345789999999999999999999753 2221 1223334456788999999987777654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 479999999999999999999999999999999999999999999999777999999999986 56778999999986 7
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 88888875
No 203
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=338.19 Aligned_cols=219 Identities=23% Similarity=0.286 Sum_probs=178.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+.... ...+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 367888887763110 0014599999999999999999999999999999999998663 489999999875
Q ss_pred cc-------ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000540 926 KQ-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGV 996 (1433)
Q Consensus 926 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1433)
.. ...++.+||++|++. .+..+||.||+.|....+ ....++.++.++++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 123457999999963 333589999998765432 223444556788999999997 5666653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 469999999999999999999999999999999999999999999999777999999999986 57789999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 88888875
No 204
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.3e-35 Score=328.73 Aligned_cols=205 Identities=22% Similarity=0.358 Sum_probs=172.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 35999999999999999999999999999999999999988 9999999998754332 2469999999888999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.+.....+... .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLSK----------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 999999988643221100 011224567889999987666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . ++++++++|+..++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 3 56677788998999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988763
No 205
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=336.42 Aligned_cols=213 Identities=23% Similarity=0.305 Sum_probs=178.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ +++.+|+|||++|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 56778877652 123599999999999999999999999999999999998653 4799999998764
Q ss_pred c----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 927 Q----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
. ...++.+||++|++. .++..|+.||+.+..... ..+....++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 223467999999975 356789999998765332 1334444567889999999988777654 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||++. ++ +.||++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 66999999987 688899
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 885
No 206
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-35 Score=331.62 Aligned_cols=215 Identities=21% Similarity=0.234 Sum_probs=175.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988763 235999999999999999999999999999999999976531 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK----PLKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 993 (1433)
.++.. ...++.++|++|++.+++ +||+||+.+...... .......++.+.++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 124567999999988774 899999988654321 112333455678889998874 233443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999987 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 207
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=332.60 Aligned_cols=217 Identities=23% Similarity=0.263 Sum_probs=178.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|+++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEEC
Confidence 477888887652 34699999999999999999999999999999999998653 479999999875
Q ss_pred ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000540 926 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EIDSETRKMFIGEVMELVELKPLKQS 989 (1433)
Q Consensus 926 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 989 (1433)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.+.+.++.+++.+..++
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986431110 0 00111233457788999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCE
Q 000540 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1068 (1433)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~ 1068 (1433)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 54 469999999999999999999999999999999999999999999999765 899999999986 57788999
Q ss_pred EEEEecCcEEEEECCC
Q 000540 1069 LFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1069 v~~L~~Gg~~~y~G~~ 1084 (1433)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999986 688888875
No 208
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7e-35 Score=323.98 Aligned_cols=199 Identities=30% Similarity=0.423 Sum_probs=168.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++..||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5899999999999999999999999999999999999987 9999999998754332 35799999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.++.+..+... .+....++.+++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988654321100 011234567889999987766544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIV 404 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv 404 (1433)
|||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.... +.++++++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876433 456777888889999999999999999999
Q ss_pred Eec
Q 000540 405 YQG 407 (1433)
Q Consensus 405 ~~G 407 (1433)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 209
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=347.87 Aligned_cols=206 Identities=23% Similarity=0.315 Sum_probs=176.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+..+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999999865432 2479999999999
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.|+.+..+... .+...+++++++.+||++..++.
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~-- 161 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSY-- 161 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcC--
Confidence 999999999999765432110 01123456789999998766644
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
++.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+. .++++++++|+..++.+++|+|++
T Consensus 162 ---~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 162 ---PDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEEEE
Confidence 4579999999999999999999999999999999999999999999987543 356677789999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999998874
No 210
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.7e-35 Score=329.42 Aligned_cols=203 Identities=24% Similarity=0.345 Sum_probs=169.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCCCceeEEEECCeeCCCCC-----ccceEEEecCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKL-----DSSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHD 235 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 5999999999999999999999999999999999999 776 999999999875432 235799999998
Q ss_pred CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000540 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTV 315 (1433)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1433)
.++ .+||+||+.++.+..+.... .+....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999987543211000 00123456788999998765543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
+. +..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++..+ . +++++++|+..++.++||++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 2 66777889999999999999
Q ss_pred EEEcCCeEEEecCHHH
Q 000540 396 ILLSNGQIVYQGPREL 411 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~ 411 (1433)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998765
No 211
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.13 Aligned_cols=217 Identities=24% Similarity=0.255 Sum_probs=177.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 377888887763 246999999999999999999999999999999999986532 2479999999
Q ss_pred ccCc--c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKK--Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~--~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.++. . ..+++.++|++|++.+++.+||.||+.+....+.. ....+..++.++++++.+++.. ..++.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 1 12456799999999999999999999886543211 1123334456788999998853 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.||++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 7 688888875
No 212
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-35 Score=325.36 Aligned_cols=201 Identities=28% Similarity=0.392 Sum_probs=169.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999998763 246799999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.++....+... .+....++.+++.+||++..++.+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998754322100 001224567889999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS--NGQ 402 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~--~G~ 402 (1433)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++... .++++++++|+..++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987543 34567778888889999999999999 799
Q ss_pred EEEecCHH
Q 000540 403 IVYQGPRE 410 (1433)
Q Consensus 403 iv~~G~~~ 410 (1433)
+++.++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99888653
No 213
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-35 Score=323.67 Aligned_cols=194 Identities=25% Similarity=0.329 Sum_probs=163.1
Q ss_pred eeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc-cccceEEEeecCCCCCCCCCHHHHHHH
Q 000540 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLLY 955 (1433)
Q Consensus 877 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f 955 (1433)
|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 99999999999999999999999999999998653 479999999876431 234579999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHH
Q 000540 956 SAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1433)
Q Consensus 956 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~ 1035 (1433)
....+. .. ....++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1233456789999999988777664 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1036 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1036 ~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
.+++.|++++++ |+|||++||++. ++.+.||++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999986 57788999999997 5666543
No 214
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.5e-35 Score=326.45 Aligned_cols=203 Identities=29% Similarity=0.412 Sum_probs=171.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 45999999999999999999999999999999999999987 999999999875421 2356999999988888999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.+..+..+... .+....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999988654332110 001123567888999987777554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .++++++|+...+.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998643 3 677778888889999999999999999
Q ss_pred EEEecCHHHH
Q 000540 403 IVYQGPRELV 412 (1433)
Q Consensus 403 iv~~G~~~~~ 412 (1433)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999998764
No 215
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=331.00 Aligned_cols=214 Identities=23% Similarity=0.274 Sum_probs=176.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+.. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899987653 246999999999999999999999999999999999976421 2589999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ..+++.++|++|++.+++ +|++||+.+....+ ....+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 123567999999988887 89999999865432 1233334456788999998843 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.||++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999864 899999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 216
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.9e-35 Score=325.78 Aligned_cols=195 Identities=26% Similarity=0.383 Sum_probs=162.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 9999999998765331 3579999999888
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 889999999998754332100 001224567889999987666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .++++++++|+..++. .||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 469999999999999999999999999999999999999999999987542 3456777788888775 9999999
Q ss_pred EcCCeE
Q 000540 398 LSNGQI 403 (1433)
Q Consensus 398 L~~G~i 403 (1433)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 217
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-34 Score=328.40 Aligned_cols=215 Identities=25% Similarity=0.300 Sum_probs=177.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56778876652 24699999999999999999999999999999999997653 4799999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP--P---EIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..++.++++++.+++.+..++.+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1234699999999999999999999885432110 0 0112334456889999999988777654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||++. ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999875 799999999986 57788999999987 67
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 8888875
No 218
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.2e-35 Score=324.90 Aligned_cols=210 Identities=25% Similarity=0.312 Sum_probs=171.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 4677887766311 0124699999999999999999999999999999999998653 4799999998753
Q ss_pred cc---c---cc-ceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000540 927 QE---T---FA-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGL 999 (1433)
Q Consensus 927 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1433)
.. . ++ +.++|++|++.+++.+|++||+.+....+. ....+..+.+.++++.+++.+..++.+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 12 568999999988889999999988654321 222333456788999999987777654 469
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 1000 SgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55899999997 454
No 219
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-35 Score=339.97 Aligned_cols=205 Identities=26% Similarity=0.359 Sum_probs=177.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2357999999988899999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.|.++..+... .+...+++.+++.+||++..++.+ +
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~ 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKI-----G 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCch-----h
Confidence 9999998765433110 011234577899999998877655 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++||+||+++|++|+|||||+|||+.++..+.+.|+++. . +++|++++|+..++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~-~~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--K-DKTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--C-CCEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999863 2 4678888999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 220
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-35 Score=332.00 Aligned_cols=213 Identities=25% Similarity=0.359 Sum_probs=177.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcc
Confidence 56788877653 34699999999999999999999999999999999998653 4799999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
. ...++.++|++|++.+++.+||+||+.+..... ....+..++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 123456899999988888899999998754221 1112233456788999999988777764 4699999
Q ss_pred HHHHHHHHHHh------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 1004 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 1004 rqRl~iA~aL~------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||++||++. ++.+.||++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 56899999999986 57778999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 88888875
No 221
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.2e-35 Score=375.27 Aligned_cols=207 Identities=24% Similarity=0.379 Sum_probs=167.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++++||+.+||+||||||||||+++|+|++ |. +|+|.+||+++++... ++.++||+|++. +++.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~-LF~~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQ-LPHG 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCc-CCCc
Confidence 35899999999999999999999999999999999999 77 8999999999987654 468999999765 5567
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++|||.++.. ....+.+.++++... .++. .-.|++..||.||+++.
T Consensus 438 TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~--i~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 438 TLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEF--LPLLPQGLDTPIGDQAA 484 (588)
T ss_pred CHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHH--HHhcccccccccccCCC
Confidence 99999999732 111222222222110 1112 22467788999998765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
.||||||||++|||||+++|+||+||||||+||+.++..|.+.|++.. .++| ++.++|.. ++.+.||+|++|++|
T Consensus 485 -~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~T-vIiItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 485 -GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQT-TLMVTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCE-EEEEecCh-HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998753 3344 45555554 566789999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
++++.|+++++++
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 222
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=335.08 Aligned_cols=215 Identities=25% Similarity=0.336 Sum_probs=176.0
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4899999999999999999999999999999999999988 9999999998865332 357999999852 55678
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.|+.+..+.. ..+.+.+++.+++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 9999999865422110 0011234677899999987766544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+.||+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 567788899999999999999999999
Q ss_pred eEEEecCHHHHH--HHHHhcCCCCC
Q 000540 402 QIVYQGPRELVL--EFFESMGFKCP 424 (1433)
Q Consensus 402 ~iv~~G~~~~~~--~~f~~~G~~~p 424 (1433)
++++.|+++++. +.+...|+.+|
T Consensus 215 ~i~~~g~~~~~~~~~~~~~~~~~~~ 239 (274)
T PRK13647 215 RVLAEGDKSLLTDEDIVEQAGLRLP 239 (274)
T ss_pred EEEEECCHHHhcCHHHHHHcCCCCC
Confidence 999999987542 23334444443
No 223
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.78 Aligned_cols=214 Identities=24% Similarity=0.363 Sum_probs=179.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ +...+|+|||+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 67788887763 123589999999999999999999999999999999998653 4899999998754
Q ss_pred c---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 Q---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
. ...++.+||++|++. .+...||.||+.+..... ..+.+..++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 334689999998765322 2334444566889999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999987 57789999999987 688899
Q ss_pred CCC
Q 000540 1082 GPL 1084 (1433)
Q Consensus 1082 G~~ 1084 (1433)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 875
No 224
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.1e-35 Score=326.50 Aligned_cols=195 Identities=24% Similarity=0.374 Sum_probs=164.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999875432 235799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++.+..+... .+....++++++.+||++..++.+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 89999999998754322100 011234567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.++++++|+.+++.++||+|++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998753 3 566777889999999999999999
Q ss_pred cCCeE
Q 000540 399 SNGQI 403 (1433)
Q Consensus 399 ~~G~i 403 (1433)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 225
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=325.07 Aligned_cols=201 Identities=23% Similarity=0.321 Sum_probs=167.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999987 9999999998865432 2469999999888
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.++....+... .+.+.+++.+++.+||++..++.
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~-- 142 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHR-- 142 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC--
Confidence 888999999998654321100 01123456789999998766654
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
++.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+..++.. +|++++
T Consensus 143 ---~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 143 ---PSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ---hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 4569999999999999999999999999999999999999999999987543 35667778888888765 589999
Q ss_pred EcCCeEEEecCH
Q 000540 398 LSNGQIVYQGPR 409 (1433)
Q Consensus 398 L~~G~iv~~G~~ 409 (1433)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 226
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=347.01 Aligned_cols=203 Identities=24% Similarity=0.285 Sum_probs=174.4
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc---c----ccceEEEeecCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE---T----FARISGYCEQNDI 942 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 942 (1433)
+...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+||++|+..
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 344689999999999999999999999999999999998763 479999999876421 1 1346999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000540 943 HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1433)
Q Consensus 943 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlL 1022 (1433)
+++.+||+||+.|....+. ...++.++.+.++++.++|.+..++.+ ..||||||||++|||||+.+|++|||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 233445567889999999998877764 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999875 4899999999986 57788999999996 688888875
No 227
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=9.4e-35 Score=344.21 Aligned_cols=208 Identities=24% Similarity=0.293 Sum_probs=176.8
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCe----eCCCCCc-------cceEEEe
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH----NMDEFVP-------ERTAAYI 231 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1433)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333211 2469999
Q ss_pred cCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 000540 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1433)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1433)
+|+..+++.+||+||+.|+.+..+... .+.+..++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433210 1112346778999999877
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 000540 312 ADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNL 391 (1433)
Q Consensus 312 ~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1433)
.|..+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.. ..+.++++++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~-~~~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQA-KLNKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHh
Confidence 77544 46999999999999999999999999999999999999999999998754 3356777789999999999
Q ss_pred cCeEEEEcCCeEEEecCHHHHH
Q 000540 392 FDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 392 ~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999875
No 228
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-34 Score=323.49 Aligned_cols=198 Identities=30% Similarity=0.446 Sum_probs=167.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCCH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1433)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999987 999999999875421 23579999999888888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.+..+..+.. ..+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------------------------------GDELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 99998754332110 0011234577899999987766544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998743 3 56777788898999999999999999999
Q ss_pred EEec
Q 000540 404 VYQG 407 (1433)
Q Consensus 404 v~~G 407 (1433)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 229
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=339.84 Aligned_cols=219 Identities=21% Similarity=0.391 Sum_probs=176.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-------------------Ccc
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------------------VPE 225 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1433)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999998 99999999887532 113
Q ss_pred ceEEEecCCC-CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 000540 226 RTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1433)
Q Consensus 226 ~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1433)
+.++||+|++ ..+...||+||+.|+....+.. ..+...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 6799999985 2344569999999875322110 0111234567889
Q ss_pred HcCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 000540 305 VLGLD-VCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQ 383 (1433)
Q Consensus 305 ~lgL~-~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q 383 (1433)
.+||+ +..+ +.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|++++|
T Consensus 162 ~~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 3444 34557999999999999999999999999999999999999999999998753 3 567778899
Q ss_pred ChhHHHhhcCeEEEEcCCeEEEecCHHHHH---HHHHhcCCCCCCCC
Q 000540 384 PAPETYNLFDDIILLSNGQIVYQGPRELVL---EFFESMGFKCPKRK 427 (1433)
Q Consensus 384 ~~~~~~~~~D~iivL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~ 427 (1433)
+..++.++||+|++|++|++++.|+++++. +.++..|+.+|...
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~ 281 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRVI 281 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChHH
Confidence 999999999999999999999999999875 23455566655433
No 230
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-35 Score=338.86 Aligned_cols=217 Identities=24% Similarity=0.356 Sum_probs=176.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC----------------------
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF---------------------- 222 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---------------------- 222 (1433)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999998 89999998764210
Q ss_pred -----CccceEEEecCCC-CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHH
Q 000540 223 -----VPERTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEAN 296 (1433)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 296 (1433)
..++.+|||+|++ ..++..||+||+.|+....+.. ..+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHH
Confidence 1135799999984 4556689999999976543211 01122
Q ss_pred HHHHHHHHHcCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000540 297 VITDYYLKVLGLD-VCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCG 375 (1433)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~ 375 (1433)
.+++.+++.+||+ +..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQR-----SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhC-----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3467789999996 45553 4557999999999999999999999999999999999999999999998753 3 5
Q ss_pred eEEEEEecChhHHHhhcCeEEEEcCCeEEEecCHHHHHH---HHHhcCCCCCC
Q 000540 376 TAVISLLQPAPETYNLFDDIILLSNGQIVYQGPRELVLE---FFESMGFKCPK 425 (1433)
Q Consensus 376 t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1433)
.+|++++|+.+++.+.||+|++|++|++++.|+++++.. .+...|...|.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 268 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSDNKFLIENNMEPPK 268 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCHHHHHHCCCCCCh
Confidence 678889999999999999999999999999999998752 33344544443
No 231
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=334.36 Aligned_cols=215 Identities=25% Similarity=0.290 Sum_probs=180.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 3788899877631 123599999999999999999999999999999999998663 479999999876
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.+||++|++. .++..||.||+.+..... ....++.++.+.++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 223567999999973 566789999998865432 1234444567899999999998877764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||+|+.+|+||||||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..||++++|++ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999986 34 46999999986 68889
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 232
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.8e-35 Score=324.96 Aligned_cols=203 Identities=23% Similarity=0.372 Sum_probs=168.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 35899999999999999999999999999999999999987 9999999998765432 3569999999888999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTVVGDE 319 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vG~~ 319 (1433)
+||+||+.++....+ .. +....++.+++.+ ++++..++.
T Consensus 90 ~t~~~~l~~~~~~~~--~~----------------------------------~~~~~~~~~l~~~~~l~~~~~~~---- 129 (222)
T cd03224 90 LTVEENLLLGAYARR--RA----------------------------------KRKARLERVYELFPRLKERRKQL---- 129 (222)
T ss_pred CcHHHHHHHHhhhcC--ch----------------------------------hHHHHHHHHHHHHHhhhhhhhCc----
Confidence 999999988653221 00 0011234456666 466555543
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.. .++++++++|+..++.+++|+|++|+
T Consensus 130 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 130 -AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 456999999999999999999999999999999999999999999998754 35677778899999999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999988753
No 233
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.2e-34 Score=330.94 Aligned_cols=207 Identities=20% Similarity=0.332 Sum_probs=173.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999987 9999999998764321 35699999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||.||+.++...... .. ..+....++.+++.+||++..++.+
T Consensus 97 ~~~tv~enl~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~-- 141 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ-LP--------------------------------APLLHSTVMMKLEAVGLRGAAKLMP-- 141 (269)
T ss_pred CCCCHHHHHHHHHHHccC-CC--------------------------------HHHHHHHHHHHHHHcCChhhhhCCh--
Confidence 889999999886432100 00 0011223566789999988777544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .++++++++|+..++.+++|+|++|
T Consensus 142 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 142 ---SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 469999999999999999999999999999999999999999999987543 3567777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 234
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=331.43 Aligned_cols=217 Identities=25% Similarity=0.330 Sum_probs=178.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhH
Confidence 56788877652 34699999999999999999999999999999999997653 4799999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
. ...++.++|++|+..+++.+|+.||+.++...... ........++.++++++.+++.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345689999998888889999999875211000 01111233456788999999987777653 569999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||++. ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999987 57889999999986 6788888
Q ss_pred CCC
Q 000540 1083 PLG 1085 (1433)
Q Consensus 1083 ~~~ 1085 (1433)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 764
No 235
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2e-34 Score=338.75 Aligned_cols=214 Identities=21% Similarity=0.241 Sum_probs=176.8
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCC--
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD-- 235 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1433)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 469999999999999999999999999999999999998742238999999999865432 14799999986
Q ss_pred CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000540 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTV 315 (1433)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1433)
.+.+.+||.+++.+....... . ...+...++.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~-~--------------------------------~~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG-M--------------------------------SKAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC-C--------------------------------CHHHHHHHHHHHHHHcCCCChHHH-
Confidence 678899999999875432210 0 001122346677899999764332
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
. ++.+.+|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .++++++++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567889999999999999999999999999999999999999999999987653 3677888999999999999999
Q ss_pred EEEcCCeEEEecCHHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~~ 414 (1433)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 236
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=327.81 Aligned_cols=219 Identities=21% Similarity=0.276 Sum_probs=174.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCC---CCceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 922 (1433)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. +..+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887653 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 123557999999988876 6999999876543311 12233445678899999986422111111 145
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4899999999987 57788999999986 68
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 8999875
No 237
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.43 Aligned_cols=213 Identities=23% Similarity=0.351 Sum_probs=176.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 56778877653 23599999999999999999999999999999999997653 4799999998753
Q ss_pred c-----ccccceEEEeecCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 Q-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
. ...++.++|++|++.. ....|+.||+.+....+ ....++.++.++++++.+++.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234579999998753 34568999998764332 1233344456788999999988777653 5699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999986 56788999999987 68888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8875
No 238
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=328.33 Aligned_cols=220 Identities=23% Similarity=0.294 Sum_probs=175.6
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC---CceEEEEEEEc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNIKVS 921 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 921 (1433)
..++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... ..+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999988763 2369999999999999999999999999999999999642 11247999999
Q ss_pred CccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
|.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987532 123567999999988887 5999999886543211 12233345678889999985421111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.||++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999854 799999999986 57788999999987 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 78888874
No 239
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.78 Aligned_cols=218 Identities=22% Similarity=0.280 Sum_probs=180.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.+.++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 588899988763 24699999999999999999999999999999999998653 479999999875
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.++|++|++.+++..|++|++.+......+ .....+..++.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 32 22345689999999888889999999864211100 00011233456789999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.||++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 58889999999986 68889
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 88864
No 240
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=327.87 Aligned_cols=206 Identities=28% Similarity=0.412 Sum_probs=172.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999987 9999999998764332 35799999998888899
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--ccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTVVGDE 319 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vG~~ 319 (1433)
||+||+.++.+..+... .+....++++++.+||++ ..+ +
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~-----~ 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFAD-----R 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHh-----c
Confidence 99999988654322100 011234567889999975 444 3
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .++++++++|+..++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 45579999999999999999999999999999999999999999999987543 35667778888889999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|++++.|+++++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988764
No 241
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.5e-35 Score=371.82 Aligned_cols=209 Identities=28% Similarity=0.433 Sum_probs=170.7
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1433)
++++|+|+|++++|||.+||+||||||||||+++|.|+++|+ +|+|.+||.++++... ++.++||+|++.+| +
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF-~ 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLF-S 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceee-c
Confidence 346999999999999999999999999999999999999997 9999999999987655 47899999976555 5
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||+|||.++..- ...+.+.++++... .++.+ ..+++++||.||+++
T Consensus 417 ~TI~~NI~~g~~~----at~eei~~a~k~a~---------------------------~~d~I--~~lp~g~dt~vge~G 463 (567)
T COG1132 417 GTIRENIALGRPD----ATDEEIEEALKLAN---------------------------AHEFI--ANLPDGYDTIVGERG 463 (567)
T ss_pred ccHHHHHhcCCCC----CCHHHHHHHHHHhC---------------------------hHHHH--HhCcccccceecCCC
Confidence 8999999998531 11233333333221 11222 345788999999665
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
. .||||||||++||||++.+|++|+||||||+||+.+...|.+.+++.. +++|+++ +.|..+.+ ..+|+|++|++
T Consensus 464 ~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti-~~aD~IiVl~~ 538 (567)
T COG1132 464 V-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTI-KNADRIIVLDN 538 (567)
T ss_pred c-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHH-HhCCEEEEEEC
Confidence 5 699999999999999999999999999999999999999999998654 3456665 66665444 55999999999
Q ss_pred CeEEEecCHHHHHH
Q 000540 401 GQIVYQGPRELVLE 414 (1433)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1433)
|++++.|++++++.
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999975
No 242
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=328.59 Aligned_cols=214 Identities=28% Similarity=0.373 Sum_probs=173.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 45999999999999999999999999999999999999887 999999999876543 135799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++..... . ..... .+. ...+....++.+++.+||.+..++.
T Consensus 91 ~~~tv~~~l~~~~~~~~--~---~~~~~------~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~--- 141 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--S---TWRSL------FGL---------------FPKEEKQRALAALERVGLLDKAYQR--- 141 (241)
T ss_pred ccCcHHHHHHhhhcccc--h---hhhhh------ccc---------------CcHHHHHHHHHHHHHcCChhhhCCC---
Confidence 88999999987642110 0 00000 000 0001123456788999998766543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++... .+.++++++|+..++.+++|++++|
T Consensus 142 --~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 142 --ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4579999999999999999999999999999999999999999999987643 3456777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 243
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=329.15 Aligned_cols=217 Identities=18% Similarity=0.231 Sum_probs=178.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377888887763 246999999999999999999999999999999999976431 2489999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|+..+++.+||+||+.+....+. .......++.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999987654321 1123344556788999999842 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 689999999986 5778899999997
Q ss_pred c-----CcEEEEECCC
Q 000540 1074 R-----GGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~-----Gg~~~y~G~~ 1084 (1433)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 3 4789998875
No 244
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-35 Score=322.65 Aligned_cols=198 Identities=26% Similarity=0.392 Sum_probs=167.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|+..+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 35999999999999999999999999999999999999887 9999999988753 2346799999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.+..+..+... .+....++++++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988654322100 011234567889999987766544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIV 404 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv 404 (1433)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|++..+ . +.++++++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998754 3 467778899999999999999999999998
Q ss_pred Eec
Q 000540 405 YQG 407 (1433)
Q Consensus 405 ~~G 407 (1433)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 245
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=331.76 Aligned_cols=220 Identities=27% Similarity=0.350 Sum_probs=179.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYP 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1433)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 477888887653 346999999999999999999999999999999999976532 236999999987
Q ss_pred Ccc--------ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCC-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 000540 925 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-----EIDSETRKMFIGEVMELVELKPLKQSLV 991 (1433)
Q Consensus 925 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~-----~~~~~~~~~~v~~~l~~l~L~~~~~~~v 991 (1433)
... ...++.++|++|++.+++.+||+||+.+......+. ....++.+..++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999899999999998753211000 1112234456889999999987777654
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEE
Q 000540 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1070 (1433)
Q Consensus 992 g~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~ 1070 (1433)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||++. .+.+.||+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999999754 899999999986 4778899999
Q ss_pred EEecCcEEEEECCCC
Q 000540 1071 LMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1071 ~L~~Gg~~~y~G~~~ 1085 (1433)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9986 6788888864
No 246
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=337.07 Aligned_cols=220 Identities=18% Similarity=0.231 Sum_probs=179.6
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNIKVSGYP 924 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 924 (1433)
++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|.... + ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776421 1225699999999999999999999999999999999997542 2 358999999987
Q ss_pred Cccc---c----ccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---cccccc
Q 000540 925 KKQE---T----FARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL---KQSLVG 992 (1433)
Q Consensus 925 ~~~~---~----~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~vg 992 (1433)
+... . .++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+. .++.
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 6421 1 123699999998 47888999998876543321 23445556778999999999753 2333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEE
Q 000540 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFL 1071 (1433)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~ 1071 (1433)
+.+|||||||||+|||||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|+|++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 457999999999999999999999999999999999999999999999976 4899999999987 46788999999
Q ss_pred EecCcEEEEECCC
Q 000540 1072 MKRGGYEIYVGPL 1084 (1433)
Q Consensus 1072 L~~Gg~~~y~G~~ 1084 (1433)
|++ |+++..|+.
T Consensus 227 m~~-G~ive~g~~ 238 (326)
T PRK11022 227 MYA-GQVVETGKA 238 (326)
T ss_pred EEC-CEEEEECCH
Confidence 986 789999985
No 247
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=317.24 Aligned_cols=196 Identities=30% Similarity=0.572 Sum_probs=162.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYP 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1433)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999998642 13457999999999999999999999999999999999976522 458999999987
Q ss_pred Ccc--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 925 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
... ...++.++|++|++.+++.+||+||+.+....+ .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753211 1222 3569999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
||||++||+||+.+|++|||||||+|||+.+++.+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777766543467889999999997 677765
Q ss_pred C
Q 000540 1082 G 1082 (1433)
Q Consensus 1082 G 1082 (1433)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 248
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.73 Aligned_cols=218 Identities=28% Similarity=0.358 Sum_probs=179.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 478899987663 24699999999999999999999999999999999998653 479999999875
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23345799999998888889999999875321110 00111223456789999999987777664 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.||++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57788999999986 67888
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 249
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=329.32 Aligned_cols=218 Identities=20% Similarity=0.246 Sum_probs=177.9
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--C-ceEEEEEE
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIK 919 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~ 919 (1433)
++..++++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345689999988763 2369999999999999999999999999999999999753 1 13579999
Q ss_pred EcCccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000540 920 VSGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSL 990 (1433)
Q Consensus 920 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 990 (1433)
++|.+... ...++.++|++|++.+++ .|++||+.+...... ..+.+..++.++++++.+++.+ ..++.
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987531 134567999999988777 899999987653321 1233344456889999999843 23333
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1070 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~ 1070 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 35799999999999999999999999999999999999999999999986 4789999999986 5678899999
Q ss_pred EEecCcEEEEECCC
Q 000540 1071 LMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1071 ~L~~Gg~~~y~G~~ 1084 (1433)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9986 688888875
No 250
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=315.47 Aligned_cols=190 Identities=58% Similarity=0.929 Sum_probs=160.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+..|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47788998877421 012469999999999999999999999999999999999643223589999999876
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
. ...++.++|++|++.+++.+|++||+.+...+ + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 4 33456799999999888999999999864211 0 39999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++.++.+.||++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999877799999999998644678899999998757888865
No 251
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.09 Aligned_cols=214 Identities=28% Similarity=0.348 Sum_probs=177.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
+.++|+++.+. +.+.+|+|||++|++||+++|+||||||||||+++|+|.... ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 56788887763 123599999999999999999999999999999999997653 4799999998763
Q ss_pred c-----ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 334579999998754321 1234444566889999999988877764 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999986 57778999999997 68888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 252
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.3e-34 Score=336.83 Aligned_cols=225 Identities=19% Similarity=0.273 Sum_probs=182.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNIKVSGYP 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1433)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47899998776421 12356999999999999999999999999999999999976532 237999999987
Q ss_pred Cccc---c---cc-ceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000540 925 KKQE---T---FA-RISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPG 995 (1433)
Q Consensus 925 ~~~~---~---~~-~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1433)
+... . ++ +.++||+|++ .+.|.+|+.+++........ .....+..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 6421 1 12 4699999998 67889999999977654332 234455556788999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+.+||||||||++||+||+.+|++||+||||+|||+.++..|+++|+++.++ |.|+|++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999765 899999999986 46678999999986
Q ss_pred CcEEEEECCCC
Q 000540 1075 GGYEIYVGPLG 1085 (1433)
Q Consensus 1075 Gg~~~y~G~~~ 1085 (1433)
|++++.|+..
T Consensus 238 -G~ive~g~~~ 247 (330)
T PRK09473 238 -GRTMEYGNAR 247 (330)
T ss_pred -CEEEEECCHH
Confidence 7899999863
No 253
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.5e-34 Score=329.91 Aligned_cols=223 Identities=23% Similarity=0.299 Sum_probs=178.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++.....+ ..+.+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 67888887764210000 01235799999999999999999999999999999999998653 4799999998754
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
.. ..++.++|++|++ .+.+.+||+|++.+...... .......++.+.++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 21 1345799999996 45678999999976543211 122333455688999999996 555654 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 56778999999986 7
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 88898885
No 254
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.7e-34 Score=342.12 Aligned_cols=204 Identities=22% Similarity=0.297 Sum_probs=175.7
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc----Ccc---cc---c-cceEEEee
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP----KKQ---ET---F-ARISGYCE 938 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv~ 938 (1433)
+...+|+|+||+|++||+++|+|+||||||||+++|+|...+ ..|+|.++|.+ ... .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 456799999999999999999999999999999999998763 47999999962 211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000540 939 QNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1018 (1433)
Q Consensus 939 Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~ 1018 (1433)
|+..++|.+||+||+.|+...+ .....++++.+.++++.+||.+..++.+ ..||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2344556677899999999998887764 4699999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1019 iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+++|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999764 899999999987 57889999999987 6888988863
No 255
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-34 Score=324.93 Aligned_cols=211 Identities=26% Similarity=0.310 Sum_probs=172.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 35677776653 34699999999999999999999999999999999998653 4799999998754
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000540 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVE-LKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..++.++|++|++.+++.+|+.||+.+....+. .. .++..+++++.++ +.+..++. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 21 124568999999999999999999987654321 11 1233567777776 45555554 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.||++++|++ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57778999999986 68888
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88863
No 256
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-34 Score=345.72 Aligned_cols=209 Identities=24% Similarity=0.413 Sum_probs=176.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+.+|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|+..+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 45999999999999999999999999999999999999998 9999999998865432 36799999998888999
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.++..... + +. .. ...+...+++++++.+||.+..++. +
T Consensus 93 tv~e~v~~~~~~~~-~-~~----------------~~------------~~~~~~~~v~~~le~vgl~~~~~~~-----~ 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RF----------------DT------------WTETDRAAVERAMERTGVAQFADRP-----V 137 (402)
T ss_pred CHHHHHHhccchhc-c-cc----------------cC------------CCHHHHHHHHHHHHHcCCchhhcCC-----h
Confidence 99999998642110 0 00 00 0011234578889999998877754 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.|||||||||.|||||+++|++|+|||||+|||+.++..+.+.|+++.+ . ++++++++|+.+++.++||++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 57999999999999999999999999999999999999999999999864 3 457777899999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 257
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-35 Score=296.59 Aligned_cols=201 Identities=27% Similarity=0.390 Sum_probs=177.0
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHH
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYE 951 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E 951 (1433)
..+|+|+|++|.+||.++++||||||||||||+++|..++ ..|.|.+||.+++...- .-|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 3589999999999999999999999999999999998774 47999999998754322 2399999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCH
Q 000540 952 SLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1031 (1433)
Q Consensus 952 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~ 1031 (1433)
|+.|+..++. +++.++.+.+.+.+..+||.+..++.+ -+||||||||+.|||||..+|+.|+||||.+.||.
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 678889999999999999999888774 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecC-cEEEEECCCC
Q 000540 1032 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GYEIYVGPLG 1085 (1433)
Q Consensus 1032 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~G-g~~~y~G~~~ 1085 (1433)
-+++.++++|-++.+ +|+.++++||+.. +..-+++++++|+.| |+++..=|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999988864 5999999999987 444567999999853 6777766663
No 258
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.6e-34 Score=330.05 Aligned_cols=217 Identities=28% Similarity=0.383 Sum_probs=177.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 56778876653 34699999999999999999999999999999999997653 4799999998754
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
. ...++.++|++|++..++.+||+||+.+....... ......+..+.+.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 22345689999998777889999999875211000 00111223456788999999987777664 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ .+.+.||++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57789999999987 6788888
Q ss_pred CCC
Q 000540 1083 PLG 1085 (1433)
Q Consensus 1083 ~~~ 1085 (1433)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 753
No 259
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=325.30 Aligned_cols=220 Identities=20% Similarity=0.264 Sum_probs=177.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1433)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478888887763 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.++.. ..+++.++|++|+..+++.+|++||+.+...... .....+.++.++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2345679999999999999999999987543321 112233345678889999986421111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57789999999986 78
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 8888875
No 260
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-34 Score=322.82 Aligned_cols=213 Identities=27% Similarity=0.392 Sum_probs=179.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
+.++|+++.+. .+.+++|+|++++||++++|+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~ 65 (232)
T cd03300 1 IELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDIT 65 (232)
T ss_pred CEEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 35677777653 24699999999999999999999999999999999998653 4799999998764
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.. ..++.++|++|++..++.+|+.||+.+....+. ......++.++++++.+++.+..++.+ ..||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~q 137 (232)
T cd03300 66 NLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQ 137 (232)
T ss_pred cCChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHH
Confidence 32 124578999999998888999999987654331 223334556788999999988777664 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 138 rl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 138 RVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999986 688888764
No 261
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.8e-35 Score=346.57 Aligned_cols=213 Identities=26% Similarity=0.420 Sum_probs=179.8
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcC
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSG 922 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1433)
++..+..+|++|.++. ++++++|+|+++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 4566777899988752 33799999999999999999999999999999999998774 489999999
Q ss_pred ccCc---cccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc------cccC
Q 000540 923 YPKK---QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQS------LVGL 993 (1433)
Q Consensus 923 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~------~vg~ 993 (1433)
.+.. ...++++++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..+|.+..+. .+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8864 4568899999999998775 69999998742 1222 3447788888888776554 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4578999999999999999999999999999999999999999999999986 599999999975 567789999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 6 788988875
No 262
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.1e-34 Score=338.31 Aligned_cols=208 Identities=21% Similarity=0.248 Sum_probs=175.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--C
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1433)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999999865432 35799999986 5
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1433)
+++.+||.||+.+..+....+. ...+....++++++.+||. +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~--------------------------------~~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKL--------------------------------SRQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCC--------------------------------CHHHHHHHHHHHHHHcCCChHHhc--
Confidence 7889999999998654321000 0011223466789999994 3344
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
..+..|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+ ..+.++++++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQR-EMGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 45567999999999999999999999999999999999999999999998754 33567888999999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|.+|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 263
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=332.67 Aligned_cols=217 Identities=24% Similarity=0.323 Sum_probs=175.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67888888764210 0113599999999999999999999999999999999998653 4799999998753
Q ss_pred c-------ccccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000540 927 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGV 996 (1433)
Q Consensus 927 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1433)
. ...++.++|++|++ .+++ .||+||+.+..... ....++.++.++++++.++|.+ ..++. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 12356789999986 3444 69999998764332 1233344556788999999973 45554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777899999999986 57788999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 88888875
No 264
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=336.02 Aligned_cols=226 Identities=23% Similarity=0.248 Sum_probs=183.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478899987774311000 001235799999999999999999999999999999999998653 479999999876
Q ss_pred ccc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000540 926 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSLVGLPGV 996 (1433)
Q Consensus 926 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1433)
... .+++.++||+|++ .+.|.+|+.+++........ .....+.++.+.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 421 2456799999997 57889999999976544321 2344556677899999999963 44554 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
..||||||||++|||||+.+|++|++||||++||..++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 999999999986 46678999999996
Q ss_pred cEEEEECCCC
Q 000540 1076 GYEIYVGPLG 1085 (1433)
Q Consensus 1076 g~~~y~G~~~ 1085 (1433)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 7999999853
No 265
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=316.42 Aligned_cols=180 Identities=44% Similarity=0.763 Sum_probs=155.1
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEECCeeCCCCC--ccceEEEecCCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNH 237 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1433)
..+.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34579999999999999999999999999999999999998 55 999999999876532 24679999999889
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.++.+.. .
T Consensus 95 ~~~~tv~~~l~~~~~~~--------------------------------------------------------------~ 112 (202)
T cd03233 95 FPTLTVRETLDFALRCK--------------------------------------------------------------G 112 (202)
T ss_pred CCCCcHHHHHhhhhhhc--------------------------------------------------------------c
Confidence 99999999998753210 1
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++....+.++++++||+.+++.+.+|++++
T Consensus 113 ~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 113 NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 12344699999999999999999999999999999999999999999999876543556677777878899999999999
Q ss_pred EcCCeEEEec
Q 000540 398 LSNGQIVYQG 407 (1433)
Q Consensus 398 L~~G~iv~~G 407 (1433)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 266
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.4e-34 Score=321.90 Aligned_cols=213 Identities=25% Similarity=0.346 Sum_probs=174.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 47889998776321 0113599999999999999999999999999999999998653 479999999875
Q ss_pred cccc------c-cceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000540 926 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSG 998 (1433)
Q Consensus 926 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1433)
.... . ++.++|++|++.+++.+|+.||+.+....+. ......++.+.++++.+++.+..++.+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4211 1 2469999999988899999999987654321 223344567889999999987777654 46
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999986 34 56999999987 56
Q ss_pred EEE
Q 000540 1078 EIY 1080 (1433)
Q Consensus 1078 ~~y 1080 (1433)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 543
No 267
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=320.69 Aligned_cols=232 Identities=25% Similarity=0.319 Sum_probs=189.4
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-CCCceeEEEECCeeCCCCCc-------cceEEEecCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD-S-SLKVSGRVTYNGHNMDEFVP-------ERTAAYISQH 234 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1433)
..++++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33567899999998755432 2579999998
Q ss_pred C--CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000540 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1433)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1433)
+ .+-|.+||.+.+.-..+...... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 57788899888876544321000 1122345677889999998643
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 000540 313 DTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLF 392 (1433)
Q Consensus 313 dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1433)
. +-+.++.+|||||||||.||.||+.+|++||.||||++||..++.+|++.|+++.+ ..+++++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 34578889999999999999999999999999999999999999999999999876 56788999999999999999
Q ss_pred CeEEEEcCCeEEEecCHHHHHHHHHhcCCCCCCCCChHHHHHHhcC
Q 000540 393 DDIILLSNGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTS 438 (1433)
Q Consensus 393 D~iivL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ev~s 438 (1433)
|+|+||..|+||+.|+.+++. ..|.+.-....+..+..
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P~ 259 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLPR 259 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCcc
Confidence 999999999999999999874 45665555555554443
No 268
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=327.36 Aligned_cols=222 Identities=22% Similarity=0.240 Sum_probs=179.0
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEE
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIK 919 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~ 919 (1433)
.+..+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344689999988763 24699999999999999999999999999999999997542 13589999
Q ss_pred EcCccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000540 920 VSGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLP 994 (1433)
Q Consensus 920 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1433)
++|.+... ...++.++|++|++.+++ .||+||+.+..... ........++.+.++++.++|.+..+.....
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~- 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK- 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-
Confidence 99987632 123557999999988877 69999998864322 1122334456678899999985422111121
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
.+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|++
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~ 237 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL 237 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC
Confidence 246799999999999999999999999999999999999999999999985 4799999999987 57789999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 238 -G~i~~~g~~ 246 (267)
T PRK14237 238 -GDLIEYDKT 246 (267)
T ss_pred -CEEEEeCCH
Confidence 788898885
No 269
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.6e-35 Score=340.25 Aligned_cols=212 Identities=26% Similarity=0.408 Sum_probs=177.1
Q ss_pred CCceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcC
Q 000540 843 EPHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSG 922 (1433)
Q Consensus 843 ~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1433)
.+..|+|+||++++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 445699999999875 34569999999999999999999999999999999999765 379999999
Q ss_pred ccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccc
Q 000540 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-------LKQSLVG 992 (1433)
Q Consensus 923 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg 992 (1433)
.+++. +++|+.+||||||..++ +-||.+|+.|+. .+.+.+ +|-++.+..++.+ -.++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98654 56788999999988776 469999999863 333433 3455566666544 3455577
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
+.| ..|||||||||+||||++.+|+|+++|||||.||.++...+++.+++. ..|+|+|++.|+.+ ....||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEE
Confidence 654 569999999999999999999999999999999999999999999984 45899999999964 67889999999
Q ss_pred ecCcEEEEECCC
Q 000540 1073 KRGGYEIYVGPL 1084 (1433)
Q Consensus 1073 ~~Gg~~~y~G~~ 1084 (1433)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 98 577888875
No 270
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.2e-34 Score=323.67 Aligned_cols=206 Identities=26% Similarity=0.381 Sum_probs=171.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc--cceEEEecCCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP--ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 35999999999999999999999999999999999999988 9999999998754322 257999999988878999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.+.....+... .+....++++++.+||++..++.+ .
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~ 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKV-----R 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----h
Confidence 9999987653321100 011123567788999987776554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++++.. +.++++++|+..++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHh-hCCEEEEEeCCe
Confidence 699999999999999999999999999999999999999999999876433 456777888888876 499999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+++++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887754
No 271
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-34 Score=328.43 Aligned_cols=213 Identities=26% Similarity=0.345 Sum_probs=172.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999987 999999999875432 135699999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++..... .... ... +. ...+....++++++.+||.+..+..
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~~---~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~--- 142 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTWR---SLL------GR---------------FSEEDKERALSALERVGLADKAYQR--- 142 (243)
T ss_pred ccccHHHHHhhcccccc--cchh---hhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC---
Confidence 89999999987532100 0000 000 00 0001123467788999998766643
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .++++++++|+..++.++||++++|
T Consensus 143 --~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 143 --ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 4579999999999999999999999999999999999999999999987543 3567777889999999999999999
Q ss_pred cCCeEEEecCHHHH
Q 000540 399 SNGQIVYQGPRELV 412 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1433)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998875
No 272
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=325.45 Aligned_cols=215 Identities=20% Similarity=0.257 Sum_probs=174.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNIKVSGYPK 925 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 925 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.... .+..|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778887763 24699999999999999999999999999999999997531 23579999999876
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCCCC
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL----KQSLVGLPGVSG 998 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~~~ 998 (1433)
.. ..+++.++|++|++.+++ .|++||+.+....+... ......++.++++++.+++.+. .+.. +..
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~ 142 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALA 142 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhcCC-----ccc
Confidence 43 234567999999988887 69999998865433110 1122334557889999999532 2332 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++
T Consensus 143 LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i 219 (246)
T PRK14269 143 LSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GEL 219 (246)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 899999999986 57788999999996 688
Q ss_pred EEECCC
Q 000540 1079 IYVGPL 1084 (1433)
Q Consensus 1079 ~y~G~~ 1084 (1433)
++.|+.
T Consensus 220 ~~~g~~ 225 (246)
T PRK14269 220 IEFGES 225 (246)
T ss_pred EEECCH
Confidence 888875
No 273
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.9e-34 Score=318.83 Aligned_cols=198 Identities=24% Similarity=0.299 Sum_probs=166.4
Q ss_pred EeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc-ccccceEEEeecCCCCCCCCCHHHH
Q 000540 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ-ETFARISGYCEQNDIHSPFVTVYES 952 (1433)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~E~ 952 (1433)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 45799999999999999999999999999999998663 47999999987642 2345679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHH
Q 000540 953 LLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1433)
Q Consensus 953 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~ 1032 (1433)
+.+...... ... ...+..++++++.+++.+..++.+ ..||||||||++|||+|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 111 223446788999999988777664 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECC
Q 000540 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGP 1083 (1433)
Q Consensus 1033 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~ 1083 (1433)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 56778999999986 68777764
No 274
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=327.95 Aligned_cols=216 Identities=23% Similarity=0.255 Sum_probs=176.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
.++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999998763 24699999999999999999999999999999999997542 12579999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL----KQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 993 (1433)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. .....+.++.++++++.+++.+. .++.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 1245678999999888774 999999886543311 11223334567889999999642 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.||++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 789999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 6 688888874
No 275
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.8e-34 Score=324.11 Aligned_cols=198 Identities=24% Similarity=0.367 Sum_probs=166.3
Q ss_pred eeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHH
Q 000540 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 954 (1433)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 954 (1433)
|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5799999999999999999999999999999998653 4799999998764321 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000540 955 YSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1433)
Q Consensus 955 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~ 1034 (1433)
+......+ .....+.++.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2233444556789999999987777654 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1035 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1035 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999997 677777754
No 276
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=335.70 Aligned_cols=214 Identities=20% Similarity=0.227 Sum_probs=174.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEECCeeCCCCCc-------cceEEEecCCC-
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1433)
..+|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987421 138999999999865432 13699999986
Q ss_pred -CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
.+.+.+||.+++....+..... ...+...+++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~---------------------------------~~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGG---------------------------------NKKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCC---------------------------------CHHHHHHHHHHHHHHCCCCChHH-
Confidence 4788899999987654321000 01112345678899999975221
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
+-+..+..|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.++++++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 112456689999999999999999999999999999999999999999999987653 356788899999999999999
Q ss_pred EEEEcCCeEEEecCHHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~~ 414 (1433)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999998753
No 277
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-34 Score=319.82 Aligned_cols=192 Identities=28% Similarity=0.366 Sum_probs=161.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCC-CCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDN-HIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 35999999999999999999999999999999999999988 9999999998754333467999999863 3557899
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.++....+. ....++++++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 9999875422100 0123567789999987776544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++..+ . +.++++++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 56677788998999999999999999997
Q ss_pred E
Q 000540 404 V 404 (1433)
Q Consensus 404 v 404 (1433)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 278
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.4e-34 Score=322.54 Aligned_cols=212 Identities=26% Similarity=0.378 Sum_probs=178.4
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5677776653 24699999999999999999999999999999999998653 47999999987643
Q ss_pred c-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000540 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKR 1006 (1433)
Q Consensus 928 ~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1433)
. ..++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..++.+ ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234579999999998889999999987654321 223333456788999999987777654 4699999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1007 l~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999986 57788999999986 688888885
No 279
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-34 Score=319.78 Aligned_cols=195 Identities=26% Similarity=0.386 Sum_probs=165.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-CccceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-VPERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 243 (1433)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 35999999999999999999999999999999999999987 99999999876532 123579999999888889999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.+.....+. .+..++.+++.+||++..++.+ +.
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KG 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hh
Confidence 9999886532110 0123466788899987666544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|++... . +.++++++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45677788999999999999999999999
Q ss_pred EEec
Q 000540 404 VYQG 407 (1433)
Q Consensus 404 v~~G 407 (1433)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 280
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=329.98 Aligned_cols=215 Identities=23% Similarity=0.308 Sum_probs=178.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4788999877631 134689999999999999999999999999999999998653 479999999886
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..+++.++|++|++. .++.+||+||+.+..... ....++.+..+.++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998764322 1233444556889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++ ++ ..||++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 599999999986 34 57999999986 67888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 281
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=359.70 Aligned_cols=221 Identities=21% Similarity=0.284 Sum_probs=183.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++++. ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378888887763 3469999999999999999999999999999999999765423589999999876
Q ss_pred cccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.... .++.+||++|++.+++.+||+||+.+....+.....+.+..++.++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 23569999999988899999999988653321111223334456889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||++||++. .+.+.||++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999996 688898
Q ss_pred CCCCc
Q 000540 1082 GPLGR 1086 (1433)
Q Consensus 1082 G~~~~ 1086 (1433)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88753
No 282
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=333.07 Aligned_cols=206 Identities=20% Similarity=0.290 Sum_probs=171.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCC-C
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHD-N 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 236 (1433)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 245799999985 2
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1433)
.+...||.||+.|+....+.. ..+...+++++++.+||. +..++
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 141 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMSQ- 141 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC-
Confidence 344469999999875322110 011223467789999996 45554
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
.++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|++++|+.+++.+.+|+|
T Consensus 142 ----~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 142 ----SPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQT-DENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred ----CcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhCCEE
Confidence 4557999999999999999999999999999999999999999999998754 34577788899999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998864
No 283
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.5e-34 Score=324.20 Aligned_cols=205 Identities=20% Similarity=0.337 Sum_probs=172.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNHIG 239 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 35999999999999999999999999999999999999987 999999999876421 1357999999988888
Q ss_pred CCCHHHHHHHhhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
.+||+||+.++... .+.. ..+....++++++.+||++..+..
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~--- 133 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------------------------------KEEAEKQARELLAKVGLAERAHHY--- 133 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChHHHhcC---
Confidence 89999999886421 1100 001123456788999998766644
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
++.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.. . ++++++++|+..++.+++|++++|
T Consensus 134 --~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 134 --PSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred --hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999998753 3 566777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 284
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=335.59 Aligned_cols=222 Identities=18% Similarity=0.210 Sum_probs=177.8
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNIKVSGYP 924 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~ 924 (1433)
+.++|++..++.. .+...+|+|||++|++||+++|+|+||||||||+++|+|.... ....|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888776421 1235799999999999999999999999999999999997642 2457999999987
Q ss_pred Cccc---c----ccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCcccc---cc
Q 000540 925 KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPE---IDSETRKMFIGEVMELVELKPLK---QS 989 (1433)
Q Consensus 925 ~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~---~~ 989 (1433)
+... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+.. ++
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 5321 1 1246999999975 5688999999976422111000 11223455688999999997532 33
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCE
Q 000540 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1068 (1433)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~ 1068 (1433)
. +..|||||||||+||+||+.+|++|||||||+|||+.++..++++|+++.++ |.|||++|||++ .+.+++|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 3579999999999999999999999999999999999999999999999864 999999999986 57788999
Q ss_pred EEEEecCcEEEEECCC
Q 000540 1069 LFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1069 v~~L~~Gg~~~y~G~~ 1084 (1433)
+++|++ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999986 789999985
No 285
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-34 Score=318.55 Aligned_cols=224 Identities=22% Similarity=0.311 Sum_probs=181.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC---CceEEEEEEEcCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNIKVSGY 923 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g~ 923 (1433)
++.+|++.++... .+...+++||||++++||++||+|.|||||||+.++|.|... +....|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4567777665432 124679999999999999999999999999999999999764 2356789999998
Q ss_pred cCc---cc---c-ccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000540 924 PKK---QE---T-FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLP 994 (1433)
Q Consensus 924 ~~~---~~---~-~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1433)
++- .+ . +-+.+++++|++. +.|.+||.+.+.=......... .+++.++++.++|+.+++.+-....-..
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y- 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY- 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-
Confidence 642 21 1 2347999999974 6788999888765544322111 3455667788999999998753332222
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+.+|||||||||.||.||+.+|++||.||||++||...+.+|+++|+++.+ .|.|+|++|||+. -+.++||||.||.
T Consensus 151 -PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 151 -PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred -CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 468999999999999999999999999999999999999999999999986 5999999999997 4889999999999
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
. |++++.|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 286
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=324.80 Aligned_cols=209 Identities=25% Similarity=0.345 Sum_probs=173.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ ..|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 367888887753 24699999999999999999999999999999999997653 479999999875
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.++|++|++.+++ .|++||+.+....+ . . .+..+.++++.+++. +..++. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 233567999999988776 69999998653221 1 1 123577889999996 455554 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57788999999997 67888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8775
No 287
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=328.97 Aligned_cols=219 Identities=26% Similarity=0.344 Sum_probs=176.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc------eEEEEEEE
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNIKV 920 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i 920 (1433)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778876652 346999999999999999999999999999999999976532 12799999
Q ss_pred cCccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 921 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 921 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
+|.+... ..+++.++|++|++..++.+||+||+.+....... ......+.++.++++++.+++.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987542 23345689999998766679999999875321110 01111233456788999999987766553
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhc
Q 000540 997 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1066 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~---------~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~ 1066 (1433)
..||||||||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.|
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 569999999999999999 599999999999999999999999999998765 899999999986 577789
Q ss_pred CEEEEEecCcEEEEECCCC
Q 000540 1067 DELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1067 D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999986 6888888863
No 288
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=334.07 Aligned_cols=208 Identities=19% Similarity=0.241 Sum_probs=175.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--C
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1433)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999887 9999999999865432 35799999986 5
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1433)
+.+.+||.+++.+..+.... . ...+...++.++++.+||+. ..+
T Consensus 105 l~p~~~v~~~l~~~~~~~~~-~--------------------------------~~~~~~~~~~~~l~~~gL~~~~~~-- 149 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS-L--------------------------------SAAERREKALAMMAKVGLRPEHYD-- 149 (327)
T ss_pred cCCccCHHHHHHHHHHHccC-C--------------------------------CHHHHHHHHHHHHHHCCCChHHhc--
Confidence 78889999999876533210 0 00112235678899999963 445
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
..++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .++++++++|+...+.+++|+|
T Consensus 150 ---~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 150 ---RYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ---CCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999987543 3567888999999999999999
Q ss_pred EEEcCCeEEEecCHHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~~ 414 (1433)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 289
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.6e-34 Score=326.29 Aligned_cols=204 Identities=24% Similarity=0.345 Sum_probs=171.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-----------CccceEEEecCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----------VPERTAAYISQH 234 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5899999999999999999999999999999999999887 99999999987532 113579999999
Q ss_pred CCCCCCCCHHHHHHHhhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000540 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1433)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1433)
+.+++.+||+||+.++... ++.. ..+....++.+++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGEP----------------------------------KEEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCcchhh
Confidence 8888889999999885421 1100 0011234567788999987666
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 000540 314 TVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFD 393 (1433)
Q Consensus 314 t~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1433)
+. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+++|
T Consensus 140 ~~-----~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SY-----PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CC-----hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcC
Confidence 44 457999999999999999999999999999999999999999999998753 3 4567778899999999999
Q ss_pred eEEEEcCCeEEEecCHHHHH
Q 000540 394 DIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 394 ~iivL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 290
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=331.39 Aligned_cols=217 Identities=24% Similarity=0.289 Sum_probs=179.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNIKVSGYP 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 924 (1433)
.++++|+++.++. ..+.+|+|||++|++||+++|+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788898887631 12359999999999999999999999999999999999765321 13899999988
Q ss_pred Cccc---cccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 925 KKQE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 925 ~~~~---~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.... ..++.+||++|++. .++..||+||+.|....+ ....++.++.+.++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 6432 23467899999974 567799999998764322 2344455567889999999988777664 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ .+ +.||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 34 57999999986 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 98875
No 291
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=5e-34 Score=318.98 Aligned_cols=196 Identities=23% Similarity=0.343 Sum_probs=161.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.++........ .+....+.++++.+||++..+..
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 138 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHR-- 138 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC--
Confidence 888999999988653221100 01122356788899998766644
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..|||||||||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.+.. +.++++++|+..++. .+|+|++
T Consensus 139 ---~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 139 ---PSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ---hhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEE
Confidence 35799999999999999999999999999999999999999999999875433 456667778877764 5799999
Q ss_pred EcCCeEE
Q 000540 398 LSNGQIV 404 (1433)
Q Consensus 398 L~~G~iv 404 (1433)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 292
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.2e-32 Score=367.09 Aligned_cols=135 Identities=22% Similarity=0.262 Sum_probs=108.5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000540 943 HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1018 (1433)
Q Consensus 943 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~aL~---~~p~ 1018 (1433)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .++.+ ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45568999999887553222122233344455 58889999876 56553 569999999999999998 6999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEECCCC
Q 000540 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPLG 1085 (1433)
Q Consensus 1019 iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~-----~Gg~~~y~G~~~ 1085 (1433)
+|+|||||+|||+.+...+++.|++++++|.|||+++|++. .+ +.+|++++|. +||+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8999999996 368999999763
No 293
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=329.88 Aligned_cols=216 Identities=25% Similarity=0.375 Sum_probs=176.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCC-CCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD-NHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 34899999999999999999999999999999999999998 9999999999865432 35799999986 36777
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||+||+.++.+..+.. ..+...+++++++.+||++..++.+
T Consensus 97 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVGMEDFLNREP---- 138 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCc----
Confidence 89999999865432110 0111234677899999987776554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|++++|+..++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 139 -HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 33566777788888776 5999999999
Q ss_pred CeEEEecCHHHHHH---HHHhcCCCCC
Q 000540 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1433)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~~p 424 (1433)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3444455443
No 294
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.4e-34 Score=322.15 Aligned_cols=201 Identities=29% Similarity=0.395 Sum_probs=168.0
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc--ccccceEEEee-cCCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ--ETFARISGYCE-QNDIHSPF 946 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 946 (1433)
+.+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 456799999999999999999999999999999999997653 47999999976432 22456789997 55667788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000540 947 VTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1433)
Q Consensus 947 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPT 1026 (1433)
+|++|++.+....+. ...++..+.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999987654431 223344456788999999988777764 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999986 57788999999986 6776654
No 295
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=9.4e-35 Score=334.79 Aligned_cols=212 Identities=29% Similarity=0.420 Sum_probs=173.9
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCcc---ceEEEecCCCCCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGE 240 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1433)
++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++.+++. +.|||.||+ ..++.
T Consensus 348 ~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQd-VeLF~ 423 (580)
T COG4618 348 KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQD-VELFD 423 (580)
T ss_pred CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCccc-ceecC
Confidence 467999999999999999999999999999999999999998 99999999999888764 789999995 55666
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||.|||. |+.. ....+.+.++++... +.++ ++.|++.+||.||+.+
T Consensus 424 GTIaeNIa---Rf~~-~~d~~kIieAA~lAg---------------------------vHel--Il~lP~GYdT~iG~~G 470 (580)
T COG4618 424 GTIAENIA---RFGE-EADPEKVIEAARLAG---------------------------VHEL--ILRLPQGYDTRIGEGG 470 (580)
T ss_pred CcHHHHHH---hccc-cCCHHHHHHHHHHcC---------------------------hHHH--HHhCcCCccCccCCCC
Confidence 89999995 2221 111223333333221 1111 5789999999999866
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
. +||||||||+++||||+++|.+++||||-|+||+.....+.+.|.+.. ..++++ ++++ |++.+...+|+|++|++
T Consensus 471 ~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~v-vvia-HRPs~L~~~Dkilvl~~ 546 (580)
T COG4618 471 A-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTV-VVIA-HRPSALASVDKILVLQD 546 (580)
T ss_pred C-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEE-EEEe-cCHHHHhhcceeeeecC
Confidence 5 799999999999999999999999999999999999999999998753 344444 4344 46788999999999999
Q ss_pred CeEEEecCHHHHHHHH
Q 000540 401 GQIVYQGPRELVLEFF 416 (1433)
Q Consensus 401 G~iv~~G~~~~~~~~f 416 (1433)
|++-.+|+++|++...
T Consensus 547 G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 547 GRIAAFGPREEVLAKV 562 (580)
T ss_pred ChHHhcCCHHHHHHHh
Confidence 9999999999998754
No 296
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-34 Score=288.68 Aligned_cols=197 Identities=26% Similarity=0.376 Sum_probs=168.8
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc---c----cccceEEEeecCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ---E----TFARISGYCEQNDI 942 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~----~~~~~~gyv~Q~~~ 942 (1433)
+...||++|++.+++||-+||+|||||||||||-+|+|...+ .+|+|.+.|++... + -..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 457899999999999999999999999999999999998764 48999999988642 1 23467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000540 943 HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1433)
Q Consensus 943 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlL 1022 (1433)
+.|++|..||+.....++..... .......+.|+.+||.+-.+..+ .+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~---~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSA---DSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCccc---cHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 99999999999988877753221 22334678899999988766654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||.+||..+...|.+++-.+.+ .|.|.|++||||. +..-|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 999999999999999999988864 4999999999986 5678999999987 5544
No 297
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.5e-34 Score=316.67 Aligned_cols=189 Identities=23% Similarity=0.341 Sum_probs=161.4
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc---c----ccccceEEEeecCCCCC
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK---Q----ETFARISGYCEQNDIHS 944 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 944 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4699999999999999999999999999999999998653 4799999998742 1 12346799999999988
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000540 945 PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDE 1024 (1433)
+.+|++||+.+....+ ........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8999999999865432 1233444556889999999988777664 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 1025 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999985 34689999875
No 298
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=292.95 Aligned_cols=204 Identities=26% Similarity=0.383 Sum_probs=177.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
..+|+|+|+.|.+|+.++++||||||||||||+++|+.+|. .|+|.+||++++-- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 99999999988643 34568999999999999999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||++|+.+++|+++. +...++.+++...||++..+. ++-.|
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~~-----~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEHK-----YIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCccccccc-----ceEee
Confidence 999999999887432 122356778999999987664 45579
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS--NGQ 402 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~--~G~ 402 (1433)
||||||||.|||||..+|+.|+||||+++||.-|+.++.+.|-++.+.. +.-++.|+|+..|..-++++++||+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~t-gk~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQET-GKQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHh-CCeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999888877654 5566778999999999999999998 579
Q ss_pred EEEecCHHHHH
Q 000540 403 IVYQGPRELVL 413 (1433)
Q Consensus 403 iv~~G~~~~~~ 413 (1433)
|+..=+++-..
T Consensus 213 vv~~~~~df~r 223 (259)
T COG4525 213 VVERLPLDFAR 223 (259)
T ss_pred eeEecCCCHHH
Confidence 99877666333
No 299
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=328.00 Aligned_cols=215 Identities=22% Similarity=0.279 Sum_probs=174.7
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVS 921 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1433)
..+.++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988763 24699999999999999999999999999999999997542 1357999999
Q ss_pred CccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000540 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVG 992 (1433)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 992 (1433)
|.+... ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.+.++++.+++.. ..++.
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 223456999999998887 499999988654331 111 23345677888888743 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999986 578899999999
Q ss_pred ec--------C--cEEEEECCC
Q 000540 1073 KR--------G--GYEIYVGPL 1084 (1433)
Q Consensus 1073 ~~--------G--g~~~y~G~~ 1084 (1433)
++ | |++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 96 2 678888875
No 300
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.3e-34 Score=319.25 Aligned_cols=201 Identities=26% Similarity=0.339 Sum_probs=163.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCC--CC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHD--NH 237 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1433)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999987 999999999886543 235799999987 45
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTVV 316 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1433)
++.+||+||+.++....+..... ...+...+.+++.++|. ...+.
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 141 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK--------------------------------EARKEAVLLLLVGVGLPEEVLNR-- 141 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH--------------------------------HHHHHHHHHHHHHCCCChhHhhC--
Confidence 67899999998865432110000 00011124577888885 34454
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
.+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+.+|++++|+..++.+++|+|+
T Consensus 142 ---~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 142 ---YPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ---CchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEE
Confidence 3457999999999999999999999999999999999999999999998764 324567778888889989999999
Q ss_pred EEcCCeEEEec
Q 000540 397 LLSNGQIVYQG 407 (1433)
Q Consensus 397 vL~~G~iv~~G 407 (1433)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 301
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=327.75 Aligned_cols=216 Identities=23% Similarity=0.284 Sum_probs=179.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4789999887631 123589999999999999999999999999999999998653 479999999876
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+..+ ..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999974 677789999998864322 1233444556788999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 455 4999999986 78888
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 88863
No 302
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=331.72 Aligned_cols=219 Identities=20% Similarity=0.296 Sum_probs=176.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++... .....+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 578999988764210 0013599999999999999999999999999999999998653 479999999875
Q ss_pred cc--------ccccceEEEeecCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000540 926 KQ--------ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPG 995 (1433)
Q Consensus 926 ~~--------~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 995 (1433)
.. ...++.++|++|++.. ....|++||+.|..... ....+...+.+.++++.++|. +..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 21 2245679999999742 23469999998864322 123344445678899999994 5666553
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 579999999999999999999999999999999999999999999998754 899999999986 57789999999996
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 688888874
No 303
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=331.85 Aligned_cols=205 Identities=24% Similarity=0.346 Sum_probs=170.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-------CccceEEEecCCCC-
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDN- 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999998 99999999987532 11357999999852
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1433)
.+..+||+||+.|+....+.. ..+...+++++++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 444689999999865422110 011123467789999996 455544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .++++++++|+..++.++||+|
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 457999999999999999999999999999999999999999999998743 3677788999999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998764
No 304
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=330.18 Aligned_cols=219 Identities=21% Similarity=0.281 Sum_probs=179.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
-++++|+++.++... ....+.+|+|||++|++||+++|+|+||||||||+++|+|...+ ..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 378899988874210 00124699999999999999999999999999999999998653 479999999876
Q ss_pred cc----ccccceEEEeecCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 926 KQ----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 926 ~~----~~~~~~~gyv~Q~~~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. ...++.+||++|++.. +...||.|++.|..... .....+.++.++++++.+||.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2235679999999742 33469999998865432 2234445567899999999998887764 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .||++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 999999999987 344 4999999986 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 88875
No 305
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=318.83 Aligned_cols=196 Identities=29% Similarity=0.424 Sum_probs=166.0
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--ccceEEEecCCCCCCCCCCH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1433)
.+|+|+|+++++| +++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 5999999999999 99999999999999999999999988 999999998875432 24579999999888888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.+..+..+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999988654322100 011224567889999987767554 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++... + +++++++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 6778888999999999999999999999
Q ss_pred EEec
Q 000540 404 VYQG 407 (1433)
Q Consensus 404 v~~G 407 (1433)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 306
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-34 Score=326.93 Aligned_cols=205 Identities=25% Similarity=0.347 Sum_probs=169.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC---ccceEEEecCCCC-CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999886432 2457999999863 5778
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++....+.. ..+...+++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 99999998865321110 0011234677889999987776544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.. .++.++++++|+..++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 47999999999999999999999999999999999999999999998754 33456666777777774 7999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 307
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-34 Score=319.88 Aligned_cols=199 Identities=28% Similarity=0.386 Sum_probs=170.5
Q ss_pred EeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc-cccceEEEeecCCCCCCCCCHHHH
Q 000540 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE-TFARISGYCEQNDIHSPFVTVYES 952 (1433)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~E~ 952 (1433)
+|+|+|++|+|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 79999999999999999999999999999999997653 479999999876431 224578999999999989999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHH
Q 000540 953 LLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1433)
Q Consensus 953 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~ 1032 (1433)
+.+..... .....+.++.+.++++.++|.+..++.+ ..||||||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777764 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1033 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+++.+.+.|++++.+ |+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 999999999986 57788999999986 688888875
No 308
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.2e-33 Score=362.44 Aligned_cols=209 Identities=28% Similarity=0.378 Sum_probs=176.6
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+||+|+++. +.+.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 46999999999852 234699999999999999999999999999999999998764 48999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLK-------QSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1433)
.++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 456788999999998875 59999998641 1 22 23467888888876543 4555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999876 589999999985 5677999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 789999984
No 309
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-34 Score=329.79 Aligned_cols=207 Identities=25% Similarity=0.344 Sum_probs=172.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCC--C---CccceEEEecCCCC-CC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE--F---VPERTAAYISQHDN-HI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 238 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999987 9999999998742 1 12357999999853 34
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
...||+||+.++....+.. ..+....++++++.+||.+..++.
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~--- 138 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------------------------------EDEVRKRVDNALKRTGIEHLKDKP--- 138 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhhhhCC---
Confidence 5689999998865322110 001123467788999998766654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
++.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.+|++++|+.+++.++||+|++|
T Consensus 139 --~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 139 --THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 4579999999999999999999999999999999999999999999987653 3566777889999999999999999
Q ss_pred cCCeEEEecCHHHHHH
Q 000540 399 SNGQIVYQGPRELVLE 414 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1433)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 310
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.9e-34 Score=319.27 Aligned_cols=195 Identities=25% Similarity=0.375 Sum_probs=164.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999999987 999999999876432 235799999998889
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVPP----------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 99999999998754322100 011224567888999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . ++++++++|+..++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998743 3 567777888889999999999999
Q ss_pred cCCeE
Q 000540 399 SNGQI 403 (1433)
Q Consensus 399 ~~G~i 403 (1433)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 311
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-34 Score=321.08 Aligned_cols=211 Identities=21% Similarity=0.277 Sum_probs=175.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++. . ..|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecC
Confidence 567888877631 1 2389999999999999999999999999999998653 4799999998754
Q ss_pred cc-cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 927 ~~-~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 31 12456899999999999999999998653211 111 1233456889999999988777764 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999986 57788999999986 688888875
No 312
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=327.79 Aligned_cols=203 Identities=26% Similarity=0.383 Sum_probs=169.9
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCC-CCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDN-HIGE 240 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1433)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4899999999999999999999999999999999999987 9999999998864322 357999999864 4677
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||+||+.|+.+..+.. ..+....++.+++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 89999999865432110 0111234567889999987776544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.. . ++++++++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 3 56677788888887 56999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999998864
No 313
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.7e-34 Score=326.57 Aligned_cols=223 Identities=19% Similarity=0.248 Sum_probs=178.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++++..+.. +...+.+.+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 788999887742100 0000124699999999999999999999999999999999998763 4799999998764
Q ss_pred cc---cccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000540 927 QE---TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~---~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 1000 (1433)
.. ..++.++|++|++. +.+.+|+.|++.+....+. ........+.++++++.+++. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 21 22346899999875 5678899999987654332 123334445688999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57778999999986 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88764
No 314
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=322.66 Aligned_cols=215 Identities=21% Similarity=0.225 Sum_probs=175.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367888887653 246999999999999999999999999999999999975421 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++ .|++||+.|....... ......++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999998887 8999999886543211 122334456788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999876 689999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 6 688888875
No 315
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=339.76 Aligned_cols=195 Identities=23% Similarity=0.354 Sum_probs=169.7
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-------CccceEEEecCCCCCCCCCC
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1433)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999988 99999999987531 12467999999999999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.|+.+.. ...+++++++.+||++..+.. ++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRY-----PG 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCC-----cc
Confidence 999999864200 012356788999998776654 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 79999999999999999999999999999999999999999999987653 35677788999999999999999999999
Q ss_pred EEEecCHHHHH
Q 000540 403 IVYQGPRELVL 413 (1433)
Q Consensus 403 iv~~G~~~~~~ 413 (1433)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 316
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.95 Aligned_cols=215 Identities=26% Similarity=0.292 Sum_probs=174.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 378889987763 2469999999999999999999999999999999999632 21 2379999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.+.++++.+++.+ ..++.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 123567999999988877 899999987643321 1122333456778899988753 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999986 5778899999999
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 7 678888875
No 317
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=331.64 Aligned_cols=222 Identities=18% Similarity=0.221 Sum_probs=178.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVS 921 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1433)
..++++|+++.+.. +...+|+|||++|++||++||+||||||||||+++|+|.... .+..|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46899999988741 224699999999999999999999999999999999997531 2347999999
Q ss_pred CccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000540 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGV 996 (1433)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1433)
|.++.. ...++.++||+|++.+++ .|++||+.|...... ..+.+..++.+.++++.++|.+-.+..++.. +
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998742 234567999999988774 799999998643211 1112223345678889888754333333332 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.||++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999875 799999999986 46778999999986 7
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
+++..|++
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 88999886
No 318
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.3e-34 Score=319.69 Aligned_cols=202 Identities=33% Similarity=0.520 Sum_probs=163.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 569999999999999999999999999999999999998 66 999999999875433456799999998889999
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHH-HHHHcCCcccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vG~~~ 320 (1433)
||+||+.|+.......... .. .....++. .++.+++.+..++ .
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGN-----L 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhcc-----c
Confidence 9999999875432110000 00 00112233 6788888765554 4
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hHHHhhcCeEEEEc
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPA-PETYNLFDDIILLS 399 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~-~~~~~~~D~iivL~ 399 (1433)
++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++..+ .+ .++++++|+. .++.+.+|++++|+
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~-~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RN-RIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCCCHHHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999998654 33 4555566665 68999999999999
Q ss_pred CCeEEEec
Q 000540 400 NGQIVYQG 407 (1433)
Q Consensus 400 ~G~iv~~G 407 (1433)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 319
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=322.85 Aligned_cols=206 Identities=19% Similarity=0.343 Sum_probs=171.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 35999999999999999999999999999999999999987 9999999998765332 3569999999888888
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.+..+...... ..+....++.+++.+||++..+. .
T Consensus 93 ~tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~-----~ 134 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------------------------------AEQREDRANELMEEFHIEHLRDS-----M 134 (241)
T ss_pred CcHHHHHhhhhhcccccC---------------------------------HHHHHHHHHHHHHHcCCHHHhhc-----c
Confidence 999999987543211000 00112345678889999865554 3
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.++++.. . +.++++++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 135 GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 457999999999999999999999999999999999999999999988653 3 55677788888899999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 320
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.08 Aligned_cols=214 Identities=22% Similarity=0.302 Sum_probs=174.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSGY 923 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1433)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..... ..+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887653 246999999999999999999999999999999999975421 25799999998
Q ss_pred cCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCC
Q 000540 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL----KQSLVGLP 994 (1433)
Q Consensus 924 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~ 994 (1433)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7532 123567999999988887 899999987654321 11223344557888999988642 3332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+.+||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.+|++++|++
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999865 799999999986 57788999999997
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 221 -G~i~~~g~~ 229 (250)
T PRK14262 221 -GELIEYGPT 229 (250)
T ss_pred -CEEEEecCH
Confidence 678888875
No 321
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.9e-34 Score=338.23 Aligned_cols=194 Identities=24% Similarity=0.365 Sum_probs=168.1
Q ss_pred eeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc-------ccccceEEEeecCCCCCCCCCH
Q 000540 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 877 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998653 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
+||+.|+.... ...+.++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12234456889999999998877764 569999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57788999999987 688888875
No 322
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=332.07 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=170.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++..
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 01289999999998632 224679999998765
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
+ +.||+||+.|+....+... . +..+..++.+++..+|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND-R--------------------------------KILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh-H--------------------------------HHHHHHHHHHHHHcCCcchhhhhhh
Confidence 5 6899999998754321100 0 0011224556777777655556665
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
. ....|||||||||+|||||+.+|+||+|||||+|||+.+...+.++|+++.+ +.++++++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4557999999999999999999999999999999999999999999988643 36777788999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999884
No 323
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.26 Aligned_cols=218 Identities=18% Similarity=0.240 Sum_probs=172.6
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSGYP 924 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~~ 924 (1433)
+++|+++.++ .+.+|+|+||++++||+++|+|+||||||||+++|+|... +. +..|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4667776652 2469999999999999999999999999999999999753 11 247999999987
Q ss_pred Ccc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000540 925 KKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGL 999 (1433)
Q Consensus 925 ~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1433)
... ...++.++|++|++.+++. |++||+.+....+. ........++.++++++.+++.+........ .+..|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 532 1245679999999888875 99999987643321 1112233445678899999986521111111 13579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEE
Q 000540 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEI 1079 (1433)
Q Consensus 1000 SgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~ 1079 (1433)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999986 57788999999997 6888
Q ss_pred EECCC
Q 000540 1080 YVGPL 1084 (1433)
Q Consensus 1080 y~G~~ 1084 (1433)
+.|+.
T Consensus 228 ~~~~~ 232 (251)
T PRK14244 228 EYNTT 232 (251)
T ss_pred EeCCH
Confidence 88874
No 324
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8e-34 Score=310.19 Aligned_cols=190 Identities=49% Similarity=0.840 Sum_probs=160.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCC--CCceEEEEEEEcCc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNIKVSGY 923 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 923 (1433)
.++++|+++.++... +...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +..|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 478899988774210 001246999999999999999999999999999999999976 5 35899999998
Q ss_pred cCccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 924 PKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8654345667999999998888999999997642110 399999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986557788999999987 6776654
No 325
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.48 Aligned_cols=215 Identities=20% Similarity=0.249 Sum_probs=175.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1433)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999987763 2469999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL----KQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 993 (1433)
.+... ...++.+||++|++.+++. ||+||+.+....+. .....+.++.++++++.+++.+. .++.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87632 1235679999999888875 99999987643321 11233344567788999988542 2332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 6 788888875
No 326
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.99 Aligned_cols=221 Identities=21% Similarity=0.251 Sum_probs=177.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.+. ...+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988763 235899999999999999999999999999999999975431 1368999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.+... ...++.++|++|+..+++ .|++||+.+....... ....+.++.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 133567999999988887 8999999876433211 12223345678899999885422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecC-
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1075 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~G- 1075 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||++. ++.+.||++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 578899999999974
Q ss_pred ---cEEEEECCC
Q 000540 1076 ---GYEIYVGPL 1084 (1433)
Q Consensus 1076 ---g~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 789999886
No 327
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-34 Score=323.63 Aligned_cols=201 Identities=26% Similarity=0.374 Sum_probs=168.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999988 99999999987542 34689999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.++.+..+... .+....++.+++.+||++..++. +..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRY-----IWQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCC-----hhhC
Confidence 99988653221100 01122456788999998766644 4579
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS--NGQ 402 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~--~G~ 402 (1433)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++... .++++++++|+..++.++||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999987543 35667778899999999999999998 599
Q ss_pred EEEecCHH
Q 000540 403 IVYQGPRE 410 (1433)
Q Consensus 403 iv~~G~~~ 410 (1433)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988654
No 328
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.48 Aligned_cols=215 Identities=21% Similarity=0.279 Sum_probs=174.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887763 23699999999999999999999999999999999996431 12479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+ ..++.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 123567899999988877 8999999986543211 123334556788888888753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||++. .+.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999985 4899999999986 5778899999999
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 7 678888864
No 329
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=328.47 Aligned_cols=205 Identities=24% Similarity=0.343 Sum_probs=172.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999998 9999999998754322 356999999863 35578
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.++....+.. ..+....++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998765432110 0111234677899999987777554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++... .++++++++|+.+++.+.||+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999987553 3567777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999999875
No 330
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=337.17 Aligned_cols=190 Identities=24% Similarity=0.369 Sum_probs=166.2
Q ss_pred eeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc-------ccccceEEEeecCCCCCCCCCH
Q 000540 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 877 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.+||++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998653 47999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
+||+.|... ...++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345789999999988877764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|+.++..+++.|+++.++ |+|||++||+++ ++..++|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 68889999999996 688888875
No 331
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=331.94 Aligned_cols=210 Identities=23% Similarity=0.361 Sum_probs=174.1
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC---CccceEEEecCCCCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF---VPERTAAYISQHDNHIG 239 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~d~~~~ 239 (1433)
+.+++|+||||++.||+.+||+||||+||||+|++|.++.+.+ +|.|+++|++++.. ..++.||.||||.. ++
T Consensus 549 p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtv-LF 624 (790)
T KOG0056|consen 549 PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTV-LF 624 (790)
T ss_pred CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcce-ee
Confidence 3466999999999999999999999999999999999999987 99999999998643 33578999999655 45
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
+.|+..||.|+. ++...|.+.++++.. +.-=+++++++.++|+||++
T Consensus 625 NdTI~yNIryak----~~AsneevyaAAkAA-----------------------------~IHdrIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 625 NDTILYNIRYAK----PSASNEEVYAAAKAA-----------------------------QIHDRILQFPEGYNTRVGER 671 (790)
T ss_pred cceeeeheeecC----CCCChHHHHHHHHHh-----------------------------hHHHHHhcCchhhhhhhhhc
Confidence 679999999874 222223222222211 11124789999999999999
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
+.+ |||||||||+|||+++..|.+++|||.||+||..+..+|..+|.+++. ++|+|++- |+.++.-.+|.|++++
T Consensus 672 GLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ILvi~ 746 (790)
T KOG0056|consen 672 GLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADLILVIS 746 (790)
T ss_pred ccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccEEEEEe
Confidence 997 999999999999999999999999999999999999999999998864 45666543 3456677899999999
Q ss_pred CCeEEEecCHHHHHH
Q 000540 400 NGQIVYQGPRELVLE 414 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1433)
+|+|++.|.+||++.
T Consensus 747 ~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 747 NGRIVERGRHEELLK 761 (790)
T ss_pred CCeEeecCcHHHHHh
Confidence 999999999999875
No 332
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.9e-33 Score=361.56 Aligned_cols=210 Identities=27% Similarity=0.380 Sum_probs=175.5
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++++||+|+++. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999999852 124699999999999999999999999999999999998764 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
.++ ..+++.+|||+|++.+++ -|++||+.++. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 653 356788999999998875 69999997531 12222 346677887777653 34555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....||+|++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999986 4577999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 789999985
No 333
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6e-34 Score=316.72 Aligned_cols=194 Identities=28% Similarity=0.403 Sum_probs=163.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999999887 999999999886532 135799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++....+... ...+..++++++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 88999999998754321100 011234567889999987656544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.++||++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 46999999999999999999999999999999999999999999998643 3 566777889999999999999999
Q ss_pred cCCe
Q 000540 399 SNGQ 402 (1433)
Q Consensus 399 ~~G~ 402 (1433)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 334
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.77 Aligned_cols=216 Identities=21% Similarity=0.277 Sum_probs=176.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 922 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + ..|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899987763 246999999999999999999999999999999999975422 1 479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++ .|++||+.+....+. .....+.++.+.++++.+++.+ ..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 123457999999998887 899999987654331 1123333456778899988843 33332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 457999999999999999999999999999999999999999999999865 699999999987 6788999999998
Q ss_pred c----CcEEEEECCC
Q 000540 1074 R----GGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~----Gg~~~y~G~~ 1084 (1433)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 4 4789999985
No 335
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.16 Aligned_cols=215 Identities=23% Similarity=0.244 Sum_probs=173.8
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367788877653 346999999999999999999999999999999999975421 2479999999
Q ss_pred ccCcc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000540 923 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGLP 994 (1433)
Q Consensus 923 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 994 (1433)
.+... ...++.++|++|++.+++ .||.||+.+...... .......++.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 87531 234567999999998887 899999987643321 1122333456778888888753 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.||++++|++
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999875 699999999986 57888999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 688888875
No 336
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.2e-32 Score=352.77 Aligned_cols=122 Identities=24% Similarity=0.287 Sum_probs=101.8
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CeEEE
Q 000540 947 VTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1022 (1433)
Q Consensus 947 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p---~iLlL 1022 (1433)
+||.|++.|...+. . .....+.++.+||... .++. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~------~---i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP------K---IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch------h---hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78999988865432 1 1123578999999763 4444 3569999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEECCC
Q 000540 1023 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPL 1084 (1433)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~-----~Gg~~~y~G~~ 1084 (1433)
||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999878999999999985 346799999994 57899999985
No 337
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=354.22 Aligned_cols=218 Identities=25% Similarity=0.316 Sum_probs=182.1
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++++++ ++.+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 77888887763 34699999999999999999999999999999999998653 4799999998753
Q ss_pred cc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 927 ~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..++.++|++|++.+++.+||+|++.+....+.. ...+..+.++.+.++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1235689999999889999999999886432211 11223334456889999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||+||+.+|++|||||||+|||+.++..+++.|++++++|.|||++||++. ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999986 688888
Q ss_pred CCCCc
Q 000540 1082 GPLGR 1086 (1433)
Q Consensus 1082 G~~~~ 1086 (1433)
|+...
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88753
No 338
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=323.53 Aligned_cols=216 Identities=22% Similarity=0.248 Sum_probs=176.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVS 921 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1433)
..++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3588999998763 24699999999999999999999999999999999997542 1257999999
Q ss_pred CccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccccc
Q 000540 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVG 992 (1433)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 992 (1433)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 165 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN-- 165 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC--
Confidence 987642 1345679999999888875 99999987654321 1122233456788899988864 22332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.||++++|
T Consensus 166 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 240 (272)
T PRK14236 166 ---AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFM 240 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEE
Confidence 357999999999999999999999999999999999999999999999975 799999999986 577889999999
Q ss_pred ecCcEEEEECCC
Q 000540 1073 KRGGYEIYVGPL 1084 (1433)
Q Consensus 1073 ~~Gg~~~y~G~~ 1084 (1433)
++ |+++..|+.
T Consensus 241 ~~-G~i~~~g~~ 251 (272)
T PRK14236 241 YM-GKLVEYGDT 251 (272)
T ss_pred EC-CEEEecCCH
Confidence 97 688888875
No 339
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.8e-34 Score=319.36 Aligned_cols=202 Identities=25% Similarity=0.328 Sum_probs=167.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 35999999999999999999999999999999999999987 9999999998764332 3569999999888888
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Cccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTVVGDE 319 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vG~~ 319 (1433)
+||+||+.++.+..+.. .....+.+++.++ +++..++
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~----- 127 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGR----- 127 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhC-----
Confidence 99999998865432100 0011234455555 4444443
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|++..+. .++++++++|+..++.+++|+|++|+
T Consensus 128 ~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 128 RGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 44579999999999999999999999999999999999999999999987542 35677778889999999999999999
Q ss_pred CCeEEEecCHHHH
Q 000540 400 NGQIVYQGPRELV 412 (1433)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1433)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 340
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-34 Score=327.32 Aligned_cols=205 Identities=25% Similarity=0.350 Sum_probs=170.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC----ccceEEEecCCCC-CCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV----PERTAAYISQHDN-HIG 239 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999988 999999999876422 2467999999863 344
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
..||.||+.|+....+... .+...+++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 011234678899999987777654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+.++++++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 469999999999999999999999999999999999999999999987543 35566777888888765 99999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999999875
No 341
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.30 Aligned_cols=216 Identities=24% Similarity=0.301 Sum_probs=179.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++. .....+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 4788999887641 0123589999999999999999999999999999999998753 479999999876
Q ss_pred cc---ccccceEEEeecCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 567789999998764322 1233444456889999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999863 4 46999999997 67888
Q ss_pred ECCC
Q 000540 1081 VGPL 1084 (1433)
Q Consensus 1081 ~G~~ 1084 (1433)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 342
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.97 Aligned_cols=206 Identities=22% Similarity=0.298 Sum_probs=166.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998630 1389999999986421 1245799999987766
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1433)
.+||+||+.|+....+.... .+.+..++.+++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 48999999987543211000 01122345667777763 33343
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--E-SYTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 2 36777788999999999999
Q ss_pred EEEEcCCeEEEecCHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~ 413 (1433)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 343
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-34 Score=320.99 Aligned_cols=203 Identities=25% Similarity=0.397 Sum_probs=166.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 3569999999888888
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTVVGDE 319 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vG~~ 319 (1433)
+||+||+.++..... . + + ....++.+++.+ ++.+..++
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~----- 133 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQ----- 133 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhC-----
Confidence 999999988642110 0 0 0 001233445555 35544443
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+.+|++++|+
T Consensus 134 ~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 134 RAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 3457999999999999999999999999999999999999999999998754 3 4566778899899999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 344
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.4e-34 Score=337.09 Aligned_cols=199 Identities=23% Similarity=0.396 Sum_probs=170.5
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCCCCCCCC
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1433)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999988 999999999875321 2467999999998999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.|+.+... . .+...+++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998753210 0 001224577899999987777544 5
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+.++++++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAE-FGIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 79999999999999999999999999999999999999999999987653 35667778899999999999999999999
Q ss_pred EEEecCHHHHH
Q 000540 403 IVYQGPRELVL 413 (1433)
Q Consensus 403 iv~~G~~~~~~ 413 (1433)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 345
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-33 Score=320.75 Aligned_cols=206 Identities=23% Similarity=0.375 Sum_probs=169.7
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 4899999999999999999999999999999999999763 12379999999987542 1135799999998777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1433)
+ +||+||+.++.+..+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 9999999986543221000 01122456778899997 44443
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+..++.+++|+
T Consensus 141 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 -----SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 4457999999999999999999999999999999999999999999998753 3 5777788999999999999
Q ss_pred EEEEcCCeEEEecCHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~ 413 (1433)
|++|++|++++.|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 346
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.77 Aligned_cols=204 Identities=25% Similarity=0.370 Sum_probs=170.5
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC--C---ccceEEEecCCCC-CCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDN-HIG 239 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1433)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 99999999987421 1 1357999999852 445
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+||+||+.++....+.. ..+....+.++++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS----------------------------------KEEVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCchhhcCCh---
Confidence 679999998764221110 0011234567899999987777554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.++||++++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 5677888999999999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999999875
No 347
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.4e-33 Score=315.07 Aligned_cols=209 Identities=24% Similarity=0.347 Sum_probs=173.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+... .+.+.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888765310 112579999999999999999999999999999999999765 34799999998763
Q ss_pred cc------cccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000540 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1433)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++.++.+.++++.+++.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 235679999999998888999999998654321 1233444557889999999987777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.||++++|++|
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~g 217 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999876 4899999999975 45789999999874
No 348
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.1e-33 Score=315.51 Aligned_cols=197 Identities=27% Similarity=0.349 Sum_probs=163.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999988 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||.||+.++....+.. ..+....++.+++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES----------------------------------SRQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 8899999998864322110 0011234567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.... +++|++++|+...+ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999875433 45666677887776 559999999
Q ss_pred cCCeEEEe
Q 000540 399 SNGQIVYQ 406 (1433)
Q Consensus 399 ~~G~iv~~ 406 (1433)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 349
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1e-33 Score=318.10 Aligned_cols=207 Identities=22% Similarity=0.278 Sum_probs=168.5
Q ss_pred eecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEECCeeCCCCCc-cceEEEecCCCC--CCC
Q 000540 167 ILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDS----SLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HIG 239 (1433)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1433)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 6 8999999998764432 257999999864 456
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+|+.|++.+.....+... .+....++++++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 7899999987543211100 01123467789999997420 11123
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.+..|||||||||+|||+|+.+|++++|||||+|||..+...+.+.|+++.+ ..++++++++|+.+++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998754 335677778889899999999999999
Q ss_pred CCeEEEecCHHHHH
Q 000540 400 NGQIVYQGPRELVL 413 (1433)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1433)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998774
No 350
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-34 Score=323.41 Aligned_cols=194 Identities=21% Similarity=0.278 Sum_probs=165.8
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRE 245 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~~--~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAEA--REDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHHh--hCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999988 99999999876432 467999999988888899999
Q ss_pred HHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000540 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGIS 325 (1433)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1433)
|+.++... . ....++.+++.+||.+..+.. +..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 99875210 0 011245678889998766544 45799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000540 326 GGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVY 405 (1433)
Q Consensus 326 GGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~ 405 (1433)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++... .+.++++++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999987543 34567778899899999999999999999999
Q ss_pred ecCHH
Q 000540 406 QGPRE 410 (1433)
Q Consensus 406 ~G~~~ 410 (1433)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 351
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=8.8e-33 Score=313.13 Aligned_cols=173 Identities=24% Similarity=0.303 Sum_probs=136.0
Q ss_pred eeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCHHHHHH
Q 000540 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 954 (1433)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~ 954 (1433)
|.==.++|..||+++++||||-||||+.++|+|..++. +|+ .. .-.++|=||--.-....||++.+.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 44445778889999999999999999999999976532 443 11 123678888655556789999886
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000540 955 YSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1433)
Q Consensus 955 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~ 1034 (1433)
-...-+... .-...++++-|.|.++.++.+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 433221111 123457888899999988875 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 1035 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 1035 ~~i~~~l~~~~~-~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
..+-+.||+... +++|.+++-||.-. +--..||+++.+
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999975 48899999999753 444679988875
No 352
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=319.90 Aligned_cols=219 Identities=19% Similarity=0.220 Sum_probs=173.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. ...|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888887653 246999999999999999999999999999999999976531 2369999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+..+.... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 999999886543311 1122234456778888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.||++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999987 57788999999986 67
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 8888875
No 353
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=331.52 Aligned_cols=217 Identities=17% Similarity=0.191 Sum_probs=172.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEECCeeCCCCCc-------cceEEEecCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1433)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 469999999999999999999999999999999999986411 238999999998865432 246999999864
Q ss_pred --CCCCCCHHHHHHHhhHhcCC-CchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 000540 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1433)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1433)
+.+.+||.+++.+....... +..+ . ...+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~-------------~~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q-------------RFGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------c-------------cHHHHHHHHHHHHHHCCCCChHH
Confidence 57889999999764321000 0000 0 00011234677899999975321
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 000540 314 TVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFD 393 (1433)
Q Consensus 314 t~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1433)
+-+..+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+ ..+.++++++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 12345668999999999999999999999999999999999999999999998754 335678889999999999999
Q ss_pred eEEEEcCCeEEEecCHHHHH
Q 000540 394 DIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 394 ~iivL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998874
No 354
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8.8e-34 Score=318.46 Aligned_cols=202 Identities=26% Similarity=0.306 Sum_probs=167.0
Q ss_pred ecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHHHHH
Q 000540 168 LKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETL 247 (1433)
Q Consensus 168 L~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1433)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765432 358999998888889999999
Q ss_pred HHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChh
Q 000540 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGG 327 (1433)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGG 327 (1433)
.++.+....+.. ..+....++.+++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 886321000000 0011234567889999987666544 469999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 000540 328 QRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQG 407 (1433)
Q Consensus 328 qkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G 407 (1433)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++..+. .+.++++++|+..++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999987543 3556777889999999999999999999999988
Q ss_pred CHHHH
Q 000540 408 PRELV 412 (1433)
Q Consensus 408 ~~~~~ 412 (1433)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 355
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-34 Score=314.91 Aligned_cols=191 Identities=24% Similarity=0.364 Sum_probs=161.9
Q ss_pred eeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc-------ccccceEEEeecCCCCCCCCCH
Q 000540 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 877 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
|||+++++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998653 47999999987531 1234579999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
.||+.+..... .....++.+.++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456788999999987666653 569999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|+.+++.+.+.|++++++ |+|||++||++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 56788999999997 5776654
No 356
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.4e-33 Score=323.67 Aligned_cols=206 Identities=24% Similarity=0.318 Sum_probs=171.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc------cceEEEecCCC--C
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999988 9999999998764322 35699999985 3
Q ss_pred CCCCCCHHHHHHHhhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 000540 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1433)
+.+.+||+||+.+..... +.. ..+....++.+++.+||+ ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 567899999998754311 000 001123456788999996 45554
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++... .++++++++|+...+.+++|+
T Consensus 147 -----~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 -----LPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred -----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 34579999999999999999999999999999999999999999999987543 356777788999999999999
Q ss_pred EEEEcCCeEEEecCHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~ 413 (1433)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 357
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9e-35 Score=338.50 Aligned_cols=208 Identities=26% Similarity=0.375 Sum_probs=167.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++.+... ++.+++++|. .|++..
T Consensus 351 ~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr-~hlF~~ 426 (573)
T COG4987 351 TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQR-VHLFSG 426 (573)
T ss_pred cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccc-hHHHHH
Confidence 46999999999999999999999999999999999999998 9999999999877655 4689999995 677888
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|+|+|+..+... ...+.+.++.++ .+ .++. ..+.++..||.+|+.+
T Consensus 427 Tlr~NL~lA~~~----AsDEel~~aL~q---vg------------------------L~~l--~~~~p~gl~t~lge~G- 472 (573)
T COG4987 427 TLRDNLRLANPD----ASDEELWAALQQ---VG------------------------LEKL--LESAPDGLNTWLGEGG- 472 (573)
T ss_pred HHHHHHhhcCCC----CCHHHHHHHHHH---cC------------------------HHHH--HHhChhhhhchhccCC-
Confidence 999999986421 111211111111 00 0111 1234557789999755
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++|||+|.+++++++|||||.|||+.|..++++.|.+.+ ++.++++++|+...+ +.||+|++|++|
T Consensus 473 ~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~---~~kTll~vTHrL~~l-e~~drIivl~~G 548 (573)
T COG4987 473 RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA---EGKTLLMVTHRLRGL-ERMDRIIVLDNG 548 (573)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh---cCCeEEEEecccccH-hhcCEEEEEECC
Confidence 5699999999999999999999999999999999999999999887643 355666677776554 789999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
+++++|+++++++
T Consensus 549 kiie~G~~~~Ll~ 561 (573)
T COG4987 549 KIIEEGTHAELLA 561 (573)
T ss_pred eeeecCCHHhhhc
Confidence 9999999999875
No 358
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.74 Aligned_cols=216 Identities=24% Similarity=0.263 Sum_probs=174.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCce---EEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 922 (1433)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++.. .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 367788887653 3469999999999999999999999999999999999754321 379999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.+++.++.+++.. ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 1335579999999999999999999987643221 1122333455667777776642 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999987 5777899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 7 688888875
No 359
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.90 Aligned_cols=206 Identities=32% Similarity=0.490 Sum_probs=171.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35899999999999999999999999999999999999987 9999999998754322 35699999998777889
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 92 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 132 (258)
T PRK13548 92 TVEEVVAMGRAPHGLSR----------------------------------AEDDALVAAALAQVDLAHLAGRDY----- 132 (258)
T ss_pred CHHHHHHhhhcccCCCc----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----
Confidence 99999988642111000 001123567888999987666554
Q ss_pred ccCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 322 RGISGGQRKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~------~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
..|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+.. +.+|++++|+..++.+++|+|
T Consensus 133 ~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 133 PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 469999999999999999 5999999999999999999999999999876333 466777889999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 360
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.9e-33 Score=361.90 Aligned_cols=211 Identities=24% Similarity=0.363 Sum_probs=175.7
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+||+|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 46999999998841 23699999999999999999999999999999999998764 47999999988
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
+++ ..+++.+|||+|++.+++ -|++||+.++.. .+.+. +.+.++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 456788999999998876 499999986421 12222 335677777776543 35556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999985 4899999999986 5678999999987
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 788999984
No 361
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2e-33 Score=321.47 Aligned_cols=215 Identities=25% Similarity=0.265 Sum_probs=174.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP- 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 924 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++ ..|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 478889987763 23699999999999999999999999999999999997653 47999999986
Q ss_pred ----Cccc---c----ccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000540 925 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSL 990 (1433)
Q Consensus 925 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 990 (1433)
+... . .++.++|++|++. +.+.+|+.||+.+...... .....+.+..+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999976432211 1122234456788999999964 44544
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1069 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v 1069 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred EEEecCcEEEEECCC
Q 000540 1070 FLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1070 ~~L~~Gg~~~y~G~~ 1084 (1433)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99987 788888875
No 362
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.3e-33 Score=321.94 Aligned_cols=206 Identities=22% Similarity=0.308 Sum_probs=172.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC----------------ccceE
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV----------------PERTA 228 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 228 (1433)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 35999999999999999999999999999999999999987 999999999875321 14579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhHh-cCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC
Q 000540 229 AYISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1433)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1433)
+|++|++.+++.+||.||+.++... .+.. ..+....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 9999998888899999999875321 1100 0011223567789999
Q ss_pred CcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhH
Q 000540 308 LDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPE 387 (1433)
Q Consensus 308 L~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~ 387 (1433)
+++..+. .++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++... .++++++++|+..+
T Consensus 136 l~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADH-----MPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhc-----ChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 9876664 34579999999999999999999999999999999999999999999987643 35677778899999
Q ss_pred HHhhcCeEEEEcCCeEEEecCHHHHH
Q 000540 388 TYNLFDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 388 ~~~~~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.1e-33 Score=317.94 Aligned_cols=201 Identities=24% Similarity=0.304 Sum_probs=165.9
Q ss_pred EeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc--eEEEEEEEcCccCccccc-cceEEEeecCCC--CCCCCC
Q 000540 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNIKVSGYPKKQETF-ARISGYCEQNDI--HSPFVT 948 (1433)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 948 (1433)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976531 147999999987643222 357899999974 556789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000540 949 VYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK---PLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1433)
Q Consensus 949 v~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEP 1025 (1433)
+.|++.+...... ......++.++++++.+++. +..++. +..||||||||++|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 11233345688999999997 344444 356999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1026 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999986 688888874
No 364
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-33 Score=316.21 Aligned_cols=196 Identities=23% Similarity=0.320 Sum_probs=164.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC------ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999875432 135799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~--- 134 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNF--- 134 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC---
Confidence 89999999998654322100 01112356678899998766644
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++..+ . ++++++++|+..++...+|+|++|
T Consensus 135 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 135 --PIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred --chhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999998753 3 567788899999999999999999
Q ss_pred cCCeEE
Q 000540 399 SNGQIV 404 (1433)
Q Consensus 399 ~~G~iv 404 (1433)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 365
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=325.06 Aligned_cols=205 Identities=23% Similarity=0.335 Sum_probs=168.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCC-
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDN- 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1433)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35899999999999999999999999999999999999988 999999999875421 1356999999852
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1433)
.+...||+||+.|+....+... .+....++.+++.+||.. ..+.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~- 141 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEK- 141 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC-
Confidence 3445799999988653221100 011223567788899963 3443
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
.++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|++++|+..++.+++|++
T Consensus 142 ----~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 142 ----NPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred ----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 3457999999999999999999999999999999999999999999998753 3 567777888888999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998874
No 366
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.3e-33 Score=319.97 Aligned_cols=214 Identities=21% Similarity=0.273 Sum_probs=174.1
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc--eEEEEEEEcC
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNIKVSG 922 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g 922 (1433)
..++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578899987651 25899999999999999999999999999999999986531 1579999999
Q ss_pred ccCccccc-cceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000540 923 YPKKQETF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP---LKQSLVGLPGV 996 (1433)
Q Consensus 923 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~ 996 (1433)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.+++.+ ..++. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643222 356999999974 4466899999876543221 111 2256788999999976 23443 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999986 57788999999986
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 688888875
No 367
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-33 Score=312.94 Aligned_cols=202 Identities=23% Similarity=0.298 Sum_probs=171.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|++..++ ++.+++++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 488899987653 24699999999999999999999999999999999998653 479999999876
Q ss_pred ccccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
.....++.++|++|++.+++.+|+.||+.+....+. .. .++.++++++.++|.+..++.+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543334568999999988888999999987654321 11 2234678899999987777654 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
|++|||+++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998878999999999987 68889999999863
No 368
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=320.85 Aligned_cols=219 Identities=22% Similarity=0.273 Sum_probs=177.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578999998763 34699999999999999999999999999999999997542 13589999999
Q ss_pred ccCcc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000540 923 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSG 998 (1433)
Q Consensus 923 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1433)
.+... ...++.++|++|++.+++ .|++||+.+...... .....+.+..+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 124567999999988887 899999987643221 12333344456788899998653221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEE
Q 000540 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYE 1078 (1433)
Q Consensus 999 LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~ 1078 (1433)
||||||||++|||+|+.+|++|+|||||+|||+.+++.+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999986 57788999999996 688
Q ss_pred EEECCC
Q 000540 1079 IYVGPL 1084 (1433)
Q Consensus 1079 ~y~G~~ 1084 (1433)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 888885
No 369
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-33 Score=319.27 Aligned_cols=212 Identities=21% Similarity=0.321 Sum_probs=173.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 35999999999999999999999999999999999999988 9999999998764332 2469999999989999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++..... ..+... .. ....+....++++++.+|+++..++.+
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~------------~~------------~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASL------------FF------------RLSAEEKDRIEEVLETIGLADEADRLA---- 141 (242)
T ss_pred CCHHHHHHHhhhccc--cccccc------------cc------------ccHHHHHHHHHHHHHHcCCchhhcCCh----
Confidence 999999998643110 000000 00 000012234678899999987666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+.|||||||||+||||++.+|++|+|||||+|||+.++..+.+.|+++.+ +.++++++|+..++.++||+|++|++
T Consensus 142 -~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 142 -GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998743 35777788999999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 370
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.9e-33 Score=314.23 Aligned_cols=194 Identities=26% Similarity=0.327 Sum_probs=160.1
Q ss_pred cCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCC
Q 000540 868 SDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFV 947 (1433)
Q Consensus 868 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~l 947 (1433)
.++.+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+...+.+.+
T Consensus 31 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~---------~~~~~~~~~~~ 99 (224)
T cd03220 31 EVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSL---------LGLGGGFNPEL 99 (224)
T ss_pred hcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchh---------hcccccCCCCC
Confidence 34567899999999999999999999999999999999997653 47999999976421 11123345679
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000540 948 TVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1433)
Q Consensus 948 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTs 1027 (1433)
||+||+.+....+. ......++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+
T Consensus 100 tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~ 171 (224)
T cd03220 100 TGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLA 171 (224)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 99999987654321 223344556788999999988777664 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 172 gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 172 VGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999998777899999999986 56778999999986 6776654
No 371
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=323.47 Aligned_cols=205 Identities=26% Similarity=0.346 Sum_probs=169.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC--C---ccceEEEecCCCC-CC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDN-HI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 238 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... . .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999988 99999999987421 1 1357999999864 34
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+..|+.||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 56789999988643221100 011223567888999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|++++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998753 3 456777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998764
No 372
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=320.28 Aligned_cols=212 Identities=24% Similarity=0.302 Sum_probs=170.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCCC---ccceEEEecCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFV---PERTAAYISQHDNHIGE 240 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 5899999999999999999999999999999999998741 113899999999875432 23579999999888889
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++.+..+.... ..+....++++++.+||.+..+... +..
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDRL-DAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhhh-cCC
Confidence 9999999987543211000 0011234567888899864211111 234
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+.+|+|++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--K-DMTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 56799999999999999999999999999999999999999999999863 2 46777888998999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+++++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999998774
No 373
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=354.14 Aligned_cols=218 Identities=26% Similarity=0.307 Sum_probs=181.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 378888887753 34699999999999999999999999999999999998653 479999999876
Q ss_pred ccc----cccceEEEeecCCCCCCCCCHHHHHHHHHHhc--C-CC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 926 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLR--L-PP-EIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 926 ~~~----~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr--~-~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
... ..++.+||++|++.+++.+||+||+.+..... . .. ..+..+.++.+.++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346899999998899999999998753211 0 00 0122334556889999999988777764 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.|||||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||++. .+.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 69999999999999999999999999999999999999999999999877999999999986 57788999999996 68
Q ss_pred EEEECCCC
Q 000540 1078 EIYVGPLG 1085 (1433)
Q Consensus 1078 ~~y~G~~~ 1085 (1433)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 88998864
No 374
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=319.52 Aligned_cols=215 Identities=25% Similarity=0.250 Sum_probs=174.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCc---eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1433)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ...|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478889987763 246999999999999999999999999999999999964321 1379999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..++.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87542 2235679999999988874 999999987544321 122333456778888888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999875 689999999986 5678899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 7 688888875
No 375
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.50 Aligned_cols=210 Identities=19% Similarity=0.291 Sum_probs=167.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987510 12899999999875321 23569999998777
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ +||+||+.|+.+..+... .+....++++++.+|+........
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 148 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK----------------------------------KDLDGVVENALRSAALWDETSDRL- 148 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 899999998754322100 001123566788888742111111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..++.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+++|+|++
T Consensus 149 ~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~-~~tiiivsH~~~~~~~~~d~i~~ 225 (258)
T PRK14268 149 KSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--K-DYTIVIVTHNMQQAARISDYTGF 225 (258)
T ss_pred cCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--h-CCEEEEEECCHHHHHHhCCEEEE
Confidence 23445799999999999999999999999999999999999999999999874 2 46777788999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+++++.
T Consensus 226 l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 226 FLMGELIEFGQTRQIF 241 (258)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 376
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=322.05 Aligned_cols=215 Identities=20% Similarity=0.235 Sum_probs=173.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999988763 2469999999999999999999999999999999999632 1 13479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.+.++++.+++.+ ..++.
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87632 1235679999999888875 99999987643221 1112223455778888888852 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 377
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.8e-33 Score=317.22 Aligned_cols=202 Identities=25% Similarity=0.309 Sum_probs=167.3
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC--CccceEEEec-CCCCCCC
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF--VPERTAAYIS-QHDNHIG 239 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 239 (1433)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3456999999999999999999999999999999999999988 99999999875432 1235799997 5556778
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDE 319 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~ 319 (1433)
.+||+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 8999999988654322100 0112235677889999888876654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 000540 320 MIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLS 399 (1433)
Q Consensus 320 ~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~ 399 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++.++++++|+..++.+++|++++|+
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNR-ERGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 6999999999999999999999999999999999999999999998754 334567778888889999999999999
Q ss_pred CCeEEEec
Q 000540 400 NGQIVYQG 407 (1433)
Q Consensus 400 ~G~iv~~G 407 (1433)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 378
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=323.28 Aligned_cols=204 Identities=22% Similarity=0.304 Sum_probs=169.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 9999999998754322 357999999864 67788
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|+++|+.|+....+... .+....++.+++.+|+.+..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCC-----c
Confidence 99999988654321100 01122456788999998766654 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.. ..++++++++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 57999999999999999999999999999999999999999999998754 334566667777777765 9999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998874
No 379
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.9e-34 Score=365.25 Aligned_cols=210 Identities=24% Similarity=0.377 Sum_probs=174.8
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+||++.+. +++++|+|+|++++||+++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986542 1246999999999999999999999999999999999987 4 37999999988
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-------LKQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 994 (1433)
.++ ..+++.++||+|++.++. -|++||+.++. ++.++ +.++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998876 59999998741 22333 34666777776654 235666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 3 5799999999999999999999999999999999999999999999885 5899999999985 5677999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 688888874
No 380
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-33 Score=313.92 Aligned_cols=194 Identities=28% Similarity=0.428 Sum_probs=161.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999987 9999999998764322 357999999864 4678
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++....+... .+....++.+++.+||++..++.
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 131 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRS----- 131 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 999999988643221100 01112356778899998666644
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. . ++++++++|+..++.++||+|++|++
T Consensus 132 ~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 132 PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 3 56778888999999999999999999
Q ss_pred Ce
Q 000540 401 GQ 402 (1433)
Q Consensus 401 G~ 402 (1433)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 381
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=324.12 Aligned_cols=215 Identities=20% Similarity=0.263 Sum_probs=173.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1433)
.+.++|+++.+. ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999988763 2359999999999999999999999999999999999642 1 02479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK----PLKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..++.
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1235679999999988874 999999986543211 12223345677888888874 233332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.||++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 382
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=321.50 Aligned_cols=221 Identities=21% Similarity=0.276 Sum_probs=174.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 35999999999999999999999999999999999999988 9999999998765332 2358999999989999
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
+||+||+.++....... +...... +. +..+ ....+....++.+++.+||.+..++.
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~~-~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~----- 150 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------KT-PAFR---------RAESEALDRAATWLERVGLLEHANRQ----- 150 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------cc-cccc---------cchhHHHHHHHHHHHhCChhhhhhCC-----
Confidence 99999999864311000 0000000 00 0000 00011223467788999998766644
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|++++|+..++.+++|++++|++
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999998754 3356777788999999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 383
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.7e-34 Score=369.40 Aligned_cols=205 Identities=28% Similarity=0.358 Sum_probs=166.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+ ++.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l-f~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRL-MSG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCcc-Ccc
Confidence 45899999999999999999999999999999999999998 9999999999987654 4789999997655 567
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++|||.++.. ...+.+.++++. .+ .++. .-.+++..||.+|+.+
T Consensus 542 TI~eNi~~~~~-----~~~e~i~~al~~---a~------------------------l~~~--i~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP-----LTLDEAWEAARM---AG------------------------LAED--IRAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC-----CCHHHHHHHHHH---cC------------------------cHHH--HHhccccccccccCCC-
Confidence 99999998642 111222222211 11 0111 1246778899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
.+||||||||++|||||+++|++|+||||||+||+.++.++.+.|++. ++ ++++++|.. ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecCh-HHHHcCCEEEEEECC
Confidence 579999999999999999999999999999999999999999998764 34 555566654 556789999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 384
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=321.53 Aligned_cols=205 Identities=24% Similarity=0.330 Sum_probs=171.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC----------------CccceE
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF----------------VPERTA 228 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 228 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 35999999999999999999999999999999999999987 89999999887421 113579
Q ss_pred EEecCCCCCCCCCCHHHHHHHhhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC
Q 000540 229 AYISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1433)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1433)
+|++|++.+++.+||+||+.++.. ..+.. ..+...++.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999888888999999987542 11100 0011234567889999
Q ss_pred Ccccc-cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChh
Q 000540 308 LDVCA-DTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAP 386 (1433)
Q Consensus 308 L~~~~-dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~ 386 (1433)
|.+.. + ..++.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++.. . +.++++++|+..
T Consensus 141 l~~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQG-----KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 97653 4 34557999999999999999999999999999999999999999999998753 3 567777889999
Q ss_pred HHHhhcCeEEEEcCCeEEEecCHHHHH
Q 000540 387 ETYNLFDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 387 ~~~~~~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 385
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=318.23 Aligned_cols=215 Identities=25% Similarity=0.314 Sum_probs=173.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1433)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478889988763 2469999999999999999999999999999999999754 11 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 123567999999988776 799999987643321 1122233456778899998842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 678888774
No 386
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-34 Score=308.91 Aligned_cols=196 Identities=26% Similarity=0.402 Sum_probs=171.3
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-----c--cceEEEecCCCCCCCCCC
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-----P--ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~--~~~~~yv~Q~d~~~~~lT 242 (1433)
++++..+.-.+|||.|+||||||||+|+|+|+.+|+ +|.|.+||..+.+.. + +|++|||+|+-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775799999999999999999999999999 999999998764321 1 488999999999999999
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+.||.|+.... .....|++.+.||++|..+ +++.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~-----R~P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLD-----RYPG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHh-----hCCC
Confidence 999999986321 0012467888999999887 5566
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+|||||.+.|++|+||||.+.||-....+++-.|.++..+ -..-|+.++|...|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 89999999999999999999999999999999999999999999988654 45678889999999999999999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998854
No 387
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=319.85 Aligned_cols=210 Identities=23% Similarity=0.318 Sum_probs=166.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC--C---ccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |....+|+|.++|+++... . .++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 1001289999999987531 1 135799999988777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ .||+||+.++....+.... .+....++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 5999999987543221000 001223556777888754222222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+.++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--A-RYTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCeEEEEEecHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999873 2 357777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 388
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.3e-33 Score=313.18 Aligned_cols=200 Identities=20% Similarity=0.310 Sum_probs=150.0
Q ss_pred CceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCc
Q 000540 844 PHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGY 923 (1433)
Q Consensus 844 ~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1433)
|..+-++||+|.++ +.++++++++|-|.-...+||+||||.||||||++|.|...+. .|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~--~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPN--DGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCC--cchhhcc--
Confidence 33577788888764 3567899999999999999999999999999999999977642 4543321
Q ss_pred cCccccccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 924 PKKQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.+-.+|+..|... +-..-|.-|.|.-. .+++.++ ....|-.+||...++++- +..|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~------FNlpyq~----ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK------FNLPYQE----ARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh------cCCChHH----HHHHhhhhhhhhccceEe----eeecCC
Confidence 1235788888543 33345666766421 1222222 346788899988888763 567999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||-||++|..-+..|+||||||||++||.++...+-+.|++. ...||+++||-+. +.+--..++|+.+.|.--..
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999876 4579999999764 55555677777765544344
Q ss_pred CC
Q 000540 1082 GP 1083 (1433)
Q Consensus 1082 G~ 1083 (1433)
|.
T Consensus 784 Gd 785 (807)
T KOG0066|consen 784 GD 785 (807)
T ss_pred cc
Confidence 44
No 389
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=318.38 Aligned_cols=218 Identities=19% Similarity=0.242 Sum_probs=175.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1433)
.+..+++++.+ ++..+|+|+|+++++||+++|+|+||||||||+++|+|...+ + ..+|+|.++|
T Consensus 8 ~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 74 (261)
T PRK14263 8 VMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLG 74 (261)
T ss_pred eEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECC
Confidence 45666666554 345799999999999999999999999999999999997642 1 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ....++.+.++++.+++.+..+...+. ..+
T Consensus 75 ~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~ 148 (261)
T PRK14263 75 QDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SGL 148 (261)
T ss_pred EeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87532 13456799999998877 5999999988754331 1 122345678899999986432222211 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe----
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK---- 1073 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~---- 1073 (1433)
.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.||++++|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~ 226 (261)
T PRK14263 149 SLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDIS 226 (261)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 799999999999999999999999999999999999999999999985 4799999999986 5778899999997
Q ss_pred ---cCcEEEEECCC
Q 000540 1074 ---RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ---~Gg~~~y~G~~ 1084 (1433)
++|+++..|+.
T Consensus 227 ~~~~~G~i~~~g~~ 240 (261)
T PRK14263 227 QGTRTGYLVEMGPT 240 (261)
T ss_pred cccCCceEEEeCCH
Confidence 46899999885
No 390
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-33 Score=360.84 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=166.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1433)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|++.+|+ .|
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~-~T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLA-DT 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCcccc-ch
Confidence 5999999999999999999999999999999999999998 9999999999887654 478999999876555 69
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
++|||.++.. ...+.+.++++. .+ .++.++ .|++..||.+|+.+ .
T Consensus 431 i~~NI~~~~~-----~~d~~i~~a~~~---~g------------------------l~~~i~--~lp~Gldt~i~e~g-~ 475 (592)
T PRK10790 431 FLANVTLGRD-----ISEEQVWQALET---VQ------------------------LAELAR--SLPDGLYTPLGEQG-N 475 (592)
T ss_pred HHHHHHhCCC-----CCHHHHHHHHHH---cC------------------------cHHHHH--hccccccccccCCC-C
Confidence 9999998631 111222222211 00 111222 26777899999765 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++|||||+++|++++||||||+||+.++..|.+.|++.. .++|+ +.++|.. +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tv-IivtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTL-VVIAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEE-EEEecch-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998753 23444 4455554 5667899999999999
Q ss_pred EEEecCHHHHHH
Q 000540 403 IVYQGPRELVLE 414 (1433)
Q Consensus 403 iv~~G~~~~~~~ 414 (1433)
+++.|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 391
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=324.69 Aligned_cols=209 Identities=23% Similarity=0.313 Sum_probs=170.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC-CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 348999999999999999999999999999999999998871123999999998864322 357999999863 6778
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||+||+.|+.+..+.. ..+...+++.+++.+||++..++.
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~----- 140 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSE----- 140 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----
Confidence 99999998865332110 011223467789999998766644
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|++++|+..++ ..||++++|++
T Consensus 141 ~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 141 PANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 4579999999999999999999999999999999999999999999987543 355666777887777 57999999999
Q ss_pred CeEEEecCHHHHHH
Q 000540 401 GQIVYQGPRELVLE 414 (1433)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1433)
|++++.|+++++.+
T Consensus 219 G~i~~~g~~~~~~~ 232 (282)
T PRK13640 219 GKLLAQGSPVEIFS 232 (282)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999988753
No 392
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.3e-33 Score=314.01 Aligned_cols=197 Identities=23% Similarity=0.323 Sum_probs=167.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCCCCCCHH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 35899999999999999999999999999999999999988 999999998875422 35799999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.+.....+.. +..+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 9998765322100 012456788899987666543 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIV 404 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv 404 (1433)
|||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998753 3 456777888888999999999999999999
Q ss_pred EecCHH
Q 000540 405 YQGPRE 410 (1433)
Q Consensus 405 ~~G~~~ 410 (1433)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999865
No 393
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-33 Score=310.56 Aligned_cols=199 Identities=22% Similarity=0.294 Sum_probs=164.6
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 45677776652 34699999999999999999999999999999999998653 4799999998754
Q ss_pred c--ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000540 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQR 1004 (1433)
Q Consensus 927 ~--~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1433)
. ..+++.++|++|++.+++.+|+.||+.+....+. . ..++.++++++.+++.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2245678999999988899999999988654321 1 12345788999999987777653 56999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 1005 qRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
||++||+||+++|++|+|||||+|||+.++..+++.|++++++|.|||++||++. .+.+.-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999986 354444566655
No 394
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-33 Score=282.60 Aligned_cols=202 Identities=27% Similarity=0.378 Sum_probs=171.8
Q ss_pred CccccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-------cceEEEec
Q 000540 160 SRKQHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-------ERTAAYIS 232 (1433)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1433)
....+.+||++|++.|++||.++|+|||||||||||-.|+|+-+|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 4456788999999999999999999999999999999999999998 9999999999866532 26899999
Q ss_pred CCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 000540 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1433)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1433)
|...++|+||..||+...+.++|-..+. ........|+.+||.+-.
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCccccc
Confidence 9999999999999999988776532110 112345678899998776
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 000540 313 DTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLF 392 (1433)
Q Consensus 313 dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1433)
+ .++.+|||||+|||+||||+...|+|||-||||-+||..|..+|.+.|=.+.+ ..+++.+.++|+ +....-|
T Consensus 141 ~-----HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 T-----HYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHD-PQLAARC 213 (228)
T ss_pred c-----cCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCC-HHHHHhh
Confidence 6 45568999999999999999999999999999999999999999998876654 456777777777 5677889
Q ss_pred CeEEEEcCCeEEE
Q 000540 393 DDIILLSNGQIVY 405 (1433)
Q Consensus 393 D~iivL~~G~iv~ 405 (1433)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 395
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-33 Score=315.02 Aligned_cols=204 Identities=27% Similarity=0.422 Sum_probs=172.5
Q ss_pred eecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHH
Q 000540 167 ILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1433)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1433)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 457999999988888999999
Q ss_pred HHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000540 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGIS 325 (1433)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1433)
|+.++....+... .+....++++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221100 011223566788999987776554 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000540 326 GGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVY 405 (1433)
Q Consensus 326 GGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~ 405 (1433)
||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... ++++++++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999875432 4567778888899999999999999999999
Q ss_pred ecCHHHHH
Q 000540 406 QGPRELVL 413 (1433)
Q Consensus 406 ~G~~~~~~ 413 (1433)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 396
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=322.96 Aligned_cols=218 Identities=22% Similarity=0.373 Sum_probs=174.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 478899987763 124699999999999999999999999999999999998653 479999999876
Q ss_pred ccccccceEEEeecCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 926 KQETFARISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~--~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
.....++.++|++|++.+. ...+++|++.+....... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997653 234788988653211000 01111223445778899999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999777 4 7888988
Q ss_pred CCC
Q 000540 1083 PLG 1085 (1433)
Q Consensus 1083 ~~~ 1085 (1433)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 397
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=318.15 Aligned_cols=211 Identities=20% Similarity=0.279 Sum_probs=169.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 12389999999987532 124579999998777
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ .||+||+.++.+..+... ..+.+..++.+++.++|.++.+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------------------------------KKVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhhh-
Confidence 76 699999998653221100 0011234566788888864332222
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. . +.++++++|+..++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--K-NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEecCHHHHHHhcCEEEE
Confidence 24566899999999999999999999999999999999999999999999873 2 36777788888899999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 398
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.6e-33 Score=350.52 Aligned_cols=219 Identities=22% Similarity=0.337 Sum_probs=179.4
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56778877652 34699999999999999999999999999999999997653224799999998764
Q ss_pred ccc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000540 927 QET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EIDSETRKMFIGEVMELVELKPLK-QSLVGLPGVSGLS 1000 (1433)
Q Consensus 927 ~~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 1000 (1433)
... .++.+||++|++.+++.+||.||+.+....+... ....+..++.++++++.+++.+.. ++.+ ..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 311 2356899999998889999999998764322111 122333445688999999997654 3433 4699
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEE
Q 000540 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIY 1080 (1433)
Q Consensus 1001 gGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y 1080 (1433)
|||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999878999999999986 57788999999997 67888
Q ss_pred ECCCC
Q 000540 1081 VGPLG 1085 (1433)
Q Consensus 1081 ~G~~~ 1085 (1433)
.|+..
T Consensus 222 ~~~~~ 226 (500)
T TIGR02633 222 TKDMS 226 (500)
T ss_pred ecCcc
Confidence 88765
No 399
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-33 Score=320.64 Aligned_cols=205 Identities=21% Similarity=0.292 Sum_probs=170.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC---ccceEEEecCCCC-CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1433)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999988 999999999875432 2457999999863 6778
Q ss_pred CCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
.||.||+.++.+..+.. + .+...+++.+++.+||.+..++.
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTRE----- 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCC-----
Confidence 89999998865322110 0 01112457788899998766654
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ..++++++++|+..++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998754 33556777888888875 6999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 400
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=318.75 Aligned_cols=203 Identities=26% Similarity=0.324 Sum_probs=169.0
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCC------C---CccceEEEecCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE------F---VPERTAAYISQHDN 236 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999987 9999999997631 1 11357999999988
Q ss_pred CCCCCCHHHHHHHhh-HhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000540 237 HIGEMTVRETLAFSA-RCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1433)
+++.+||+||+.+.. ...+.. ..+....++.+++.+||++..++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------------------------------KDQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCC
Confidence 898999999997532 111110 001123457788999998766654
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.. . ++++++++|+..++.+++|++
T Consensus 139 -----~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 -----PLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred -----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 457999999999999999999999999999999999999999999998743 3 566777889999999999999
Q ss_pred EEEcCCeEEEecCHHHH
Q 000540 396 ILLSNGQIVYQGPRELV 412 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~ 412 (1433)
++|++|+++++|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 401
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=318.68 Aligned_cols=209 Identities=18% Similarity=0.250 Sum_probs=166.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC--C---ccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... . .++.++|++|+..++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111389999999987421 1 135799999987777
Q ss_pred CCCCHHHHHHHhhHhc-CCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 239 GEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
+ .||+||+.++.+.. +.. ..+...+++++++.+|+........
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS----------------------------------RAEMDERVEWALTKAALWNEVKDKL- 150 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC----------------------------------HHHHHHHHHHHHHHcCCChhhHHHH-
Confidence 6 89999998865322 110 0011224567788888743211111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+++|++++
T Consensus 151 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~-~~tiii~sH~~~~~~~~~d~i~~ 227 (260)
T PRK10744 151 HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--Q-DYTVVIVTHNMQQAARCSDYTAF 227 (260)
T ss_pred hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCCEEEE
Confidence 23455799999999999999999999999999999999999999999999873 2 35677788998999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|+++..|+.+++.
T Consensus 228 l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 228 MYLGELIEFGNTDTIF 243 (260)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988774
No 402
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.8e-33 Score=309.41 Aligned_cols=195 Identities=26% Similarity=0.320 Sum_probs=165.0
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4667776542 34689999999999999999999999999999999998653 47999999987532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 928 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
..+++.++|++|++.+++.+|++||+.+.... . .++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23456799999999888899999999874211 1 2345788999999988776653 569999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEE
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L 1072 (1433)
|++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 577889999877
No 403
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.5e-33 Score=350.47 Aligned_cols=211 Identities=21% Similarity=0.304 Sum_probs=179.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|+++++|++++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478899988763 24699999999999999999999999999999999998653 479999999875
Q ss_pred ccc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
... . .++.+||++|++.+++.+||+|++.+... . ....++.+.++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 421 1 12458999999999999999999987531 0 1233456788999999988777764 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||++. .+.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999997 678888
Q ss_pred CCCC
Q 000540 1082 GPLG 1085 (1433)
Q Consensus 1082 G~~~ 1085 (1433)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8864
No 404
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=317.63 Aligned_cols=200 Identities=23% Similarity=0.376 Sum_probs=167.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999988 9999999998754322 357999999877665 79
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTVVGDEMI 321 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vG~~~~ 321 (1433)
|+||+.++....+ . ....++.+++.+||+ +..++ .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 011245678889996 34443 45
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++... .+.++++++|+..++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999987542 2456777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 405
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=316.87 Aligned_cols=215 Identities=24% Similarity=0.304 Sum_probs=172.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478889887763 2469999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 133567999999988887 6999999886543321 112222345667788887642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||++. .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 589999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 688888875
No 406
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-33 Score=311.76 Aligned_cols=195 Identities=25% Similarity=0.367 Sum_probs=163.9
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1433)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999998765432 357999999988888899999998
Q ss_pred HhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000540 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQ 328 (1433)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1433)
++..... ... .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT---------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc---------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7542110 000 001234567899999987666544 4799999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEec
Q 000540 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQG 407 (1433)
Q Consensus 329 kqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G 407 (1433)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++.. ..+.+++.++|+..++.++||++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHA-ETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999998754 33566777899999999999999999999998764
No 407
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.7e-33 Score=317.72 Aligned_cols=213 Identities=23% Similarity=0.307 Sum_probs=170.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEECCeeCCCCCc----cceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|.++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 35899999999999999999999999999999999995 566 8999999998765432 23489999999899
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTVVG 317 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vG 317 (1433)
+.+|++|++.+..+...... +.... ...+....++.+++.+||++ ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~------------------~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR------------------GEEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc------------------ccccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999988643211000 00000 00112235678899999973 4554332
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh-cCeEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNL-FDDII 396 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~-~D~ii 396 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.+|++++|+..++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999998753 346677788888888888 89999
Q ss_pred EEcCCeEEEecCHHHHH
Q 000540 397 LLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999998654
No 408
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-33 Score=313.44 Aligned_cols=206 Identities=27% Similarity=0.360 Sum_probs=173.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCH
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1433)
+.+++|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+... ++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 35999999999999999999999999999999999999987 8999999998765332 4679999999888888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.++....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999988654322100 011224567889999987766544 57
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 000540 324 ISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQI 403 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~i 403 (1433)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.. ..+.++++++|+..++.+.+|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQK-ELGITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 2255667788888899999999999999999
Q ss_pred EEecCHHHHH
Q 000540 404 VYQGPRELVL 413 (1433)
Q Consensus 404 v~~G~~~~~~ 413 (1433)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999987664
No 409
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-33 Score=356.21 Aligned_cols=207 Identities=28% Similarity=0.434 Sum_probs=164.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.++ +.
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLF-SA 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhh-cc
Confidence 35899999999999999999999999999999999999998 9999999999887654 46799999986554 67
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++||+.++.. ....+.+.++.+. .+ .++. .-. ++..||.+|+.+
T Consensus 429 ti~~Ni~~~~~----~~~~~~i~~al~~---~~------------------------l~~~--i~~-p~GldT~vge~g- 473 (574)
T PRK11160 429 TLRDNLLLAAP----NASDEALIEVLQQ---VG------------------------LEKL--LED-DKGLNAWLGEGG- 473 (574)
T ss_pred cHHHHhhcCCC----ccCHHHHHHHHHH---cC------------------------CHHH--HcC-ccccCchhcCCC-
Confidence 99999998642 1111111111111 00 0111 123 677899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++||||++++|++|+||||||+||+.++..+.+.|++.. .++ +++.++|..+. ...+|+|++|++|
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~-tviiitHr~~~-~~~~d~i~~l~~G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNK-TVLMITHRLTG-LEQFDRICVMDNG 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCC-EEEEEecChhH-HHhCCEEEEEeCC
Confidence 4699999999999999999999999999999999999999999998763 334 44445555544 5679999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
++++.|+++++++
T Consensus 550 ~i~~~g~~~~l~~ 562 (574)
T PRK11160 550 QIIEQGTHQELLA 562 (574)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999999864
No 410
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=316.29 Aligned_cols=210 Identities=19% Similarity=0.275 Sum_probs=167.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCCCceeEEEECCeeCCCCC-----ccceEEEecCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGK---LDSSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|. .++. ..+|+|.++|.++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3589999999999999999999999999999999996 3331 13899999999875421 1357999999877
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
+++ .||+||+.++.+..+.... .+.+..++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 6999999887543211000 001223567788899865322222
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+..++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+.+|+|+
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--K-DYTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhCCEEE
Confidence 23456799999999999999999999999999999999999999999999873 2 3567778899999999999999
Q ss_pred EEcCCeEEEecCHHHHH
Q 000540 397 LLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999999874
No 411
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=325.91 Aligned_cols=205 Identities=20% Similarity=0.301 Sum_probs=167.6
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCC----C----CccceEEEecCCCC-
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDE----F----VPERTAAYISQHDN- 236 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5899999999999999999999999999999999999987 9999999998642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTV 315 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1433)
.+...||+||+.|+....+... .+....++.+++.++|+ +..++
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~- 146 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKR- 146 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcC-
Confidence 2345699999998653221100 01112356678889995 44554
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
.++.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .++++++++|+.+++.++||+|
T Consensus 147 ----~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 147 ----SPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred ----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 34579999999999999999999999999999999999999999999987643 3567777889999999999999
Q ss_pred EEEcCCeEEEecCHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~ 413 (1433)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 412
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=318.75 Aligned_cols=212 Identities=22% Similarity=0.313 Sum_probs=169.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCC--CCC---ccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMD--EFV---PERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1433)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ ...+|+|+++|+++. ... .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5899999999999999999999999999999999998762 113899999999875 211 235799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++....+.... ..+....++++++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhhh-c
Confidence 899999999986542211000 0011123566778888743211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..+..||||||||++|||||+.+|++++|||||+|||+.++..+.+.|++..+ + .++++++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 67777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 413
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.3e-34 Score=321.07 Aligned_cols=210 Identities=25% Similarity=0.384 Sum_probs=161.3
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++. +.+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehH
Confidence 356777766531 124589999999999999999999999999999999998653 4799999998753
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCC
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKM-----FIGEVMELV--ELKPLKQSLVGLPGV 996 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~vg~~~~ 996 (1433)
. ..+++.++|++|++.+++ .||.||+.+... ......... ..++.++.+ ++....+.. +
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~ 136 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----G 136 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----C
Confidence 2 234567999999987764 799999976421 111111100 112233333 333333332 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|++++ +|+|||+++|+++ ++ +.||++++|++ |
T Consensus 137 ~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G 212 (237)
T cd03252 137 AGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-G 212 (237)
T ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999986 4899999999986 34 56999999997 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 213 ~i~~~~~~ 220 (237)
T cd03252 213 RIVEQGSH 220 (237)
T ss_pred EEEEEcCH
Confidence 88888875
No 414
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.2e-33 Score=320.88 Aligned_cols=207 Identities=21% Similarity=0.240 Sum_probs=170.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCC--CCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN--HIG 239 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +.+
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999998753221 246999999864 567
Q ss_pred CCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccc
Q 000540 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTVVGD 318 (1433)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vG~ 318 (1433)
.+||.+++.++.+...... ..+....++.+++.+||. +..++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------------------------------PEQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCChHHHhcC---
Confidence 7899999988654321000 001122456789999994 445543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ..+++|++++|+..++.++||++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQE-KQGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999998754 33566777889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 415
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-33 Score=300.69 Aligned_cols=168 Identities=29% Similarity=0.427 Sum_probs=148.1
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ ...+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 5677776652 23599999999999999999999999999999999997653 47999999987543
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 928 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
...++.++|++|++.+++..|+.||+. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999973 8999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
|++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ .+.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999986 577789999999975
No 416
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=360.82 Aligned_cols=209 Identities=23% Similarity=0.373 Sum_probs=167.2
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.++ +.
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLF-ND 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceee-cc
Confidence 45999999999999999999999999999999999999998 9999999999877654 46899999986555 57
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++|||.++..- ....+.+.++++.. + .++.+ -.|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~---~~~~~~i~~al~~~---~------------------------l~~~i--~~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTE---QYSREQIEEAARMA---Y------------------------AMDFI--NKMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCC---CCCHHHHHHHHHHh---C------------------------cHHHH--HhcccccCceeCCCC-
Confidence 999999986310 01112222221110 0 11112 236778899999865
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|++.. . +.+++.++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~-~~tvI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--K-NRTSLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--C-CCEEEEEecch-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999998753 2 34555566654 567889999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
++++.|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999999864
No 417
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=8.9e-34 Score=369.23 Aligned_cols=206 Identities=23% Similarity=0.312 Sum_probs=165.7
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+ ++.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l-f~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFL-FEG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChh-hhc
Confidence 45899999999999999999999999999999999999998 9999999999877654 5789999997654 468
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++|||.++.. ....+.+.++++.. + .++. .-.++...||.+|+.+
T Consensus 568 Ti~eNi~l~~~----~~~~~~i~~al~~~---~------------------------l~~~--i~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDP----TIPDADLVRACKDA---A------------------------IHDV--ITSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCC----CCCHHHHHHHHHHh---C------------------------CHHH--HHhCcCcccceeccCC-
Confidence 99999987531 11112222222111 0 1111 1246778899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
.+||||||||++|||||+++|++|+||||||+||+.++..+.+.|++ .+ .++++++|.. ++...||+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~-~T~IiitHrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RG-CTCIIVAHRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cC-CEEEEEecCH-HHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999998875 23 4455566655 456779999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
++++.|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 418
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.1e-33 Score=316.00 Aligned_cols=220 Identities=24% Similarity=0.281 Sum_probs=174.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|||+++++||+++|+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478889887753 2469999999999999999999999999999999999621113579999999875
Q ss_pred ccc---cccc-eEEEeecCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000540 926 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGV 996 (1433)
Q Consensus 926 ~~~---~~~~-~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1433)
... ...+ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. ...++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 1222 478999999999999999999765432110 0111222345677889999997 34555432
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEecC
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1075 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~-~D~v~~L~~G 1075 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999999877999999999986 34455 899999986
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 788999876
No 419
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.6e-33 Score=312.95 Aligned_cols=200 Identities=26% Similarity=0.396 Sum_probs=161.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCccceEEEecCCCCCC--CCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHI--GEMT 242 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999988 9999999987642 346799999987552 4489
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|+||+.++...... .+.. ...+....++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~----------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR----------------------------LSKADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccC----------------------------CCHHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999885421100 0000 00011234677889999987666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++..+ .+++++.++|+..++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999998754 3567778899999999999999999886
Q ss_pred EEEec
Q 000540 403 IVYQG 407 (1433)
Q Consensus 403 iv~~G 407 (1433)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 420
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-34 Score=310.79 Aligned_cols=202 Identities=25% Similarity=0.295 Sum_probs=181.5
Q ss_pred eEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc------cc-ccceEEEeecCCCCC
Q 000540 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ------ET-FARISGYCEQNDIHS 944 (1433)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~-~~~~~gyv~Q~~~~~ 944 (1433)
..-++|+|++++.||++.|||-||||||||+++|.++.. ++.|+|.++|.++.. .. .++.++.|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456899999999999999999999999999999999876 458999999987532 12 345799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000540 945 PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDE 1024 (1433)
|+.||.||..|+..++ ..+++++++++.++|+.+||.++.++.+ .+||||+||||.+||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 4678889999999999999999999884 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1025 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|+|.|||--+..+++-|.++.++ ++|||++|||.+ |.+.+-|||.+|++ |+++-.|.+.
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimkd-G~ivQ~Gtp~ 250 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMKD-GEIVQVGTPE 250 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEecC-CeEEEeCCHH
Confidence 99999999999999999888654 899999999997 78899999999985 8999999863
No 421
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-33 Score=319.70 Aligned_cols=215 Identities=21% Similarity=0.226 Sum_probs=172.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1433)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 588999988763 2358999999999999999999999999999999999753 1 13579999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK----PLKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 993 (1433)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+....+..+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 123567999999988877 599999988653321 112222344567777777543 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.||++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 799999999986 5778899999998
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |++++.|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 7 688888875
No 422
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=319.34 Aligned_cols=214 Identities=18% Similarity=0.219 Sum_probs=173.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|.... .+..|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 588999988763 24699999999999999999999999999999999997531 12479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.+.+.++.+++.. ..++.
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87532 2345679999999887764 99999987643321 11 122344667788888742 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999865 799999999987 5788999999997
Q ss_pred c--------CcEEEEECCC
Q 000540 1074 R--------GGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~--------Gg~~~y~G~~ 1084 (1433)
+ .|++++.|+.
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 5789999986
No 423
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.1e-33 Score=318.64 Aligned_cols=224 Identities=25% Similarity=0.323 Sum_probs=178.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.+.... ..+ ...++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 67888887763100 000 00135699999999999999999999999999999999997653 4899999998753
Q ss_pred cc------cccceEEEeecCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~~------~~~~~~gyv~Q~~--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...++. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2356799999997 3567799999987643211 1123344455688999999996 455554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
.||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|++++++ |.|||+++|++. .+.+.||++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999986 57778999999986 6
Q ss_pred EEEEECCCC
Q 000540 1077 YEIYVGPLG 1085 (1433)
Q Consensus 1077 ~~~y~G~~~ 1085 (1433)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 888988864
No 424
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-33 Score=365.91 Aligned_cols=206 Identities=24% Similarity=0.398 Sum_probs=163.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++. +++.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~-lF~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPV-LFSG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcc-cccc
Confidence 46999999999999999999999999999999999999998 9999999999877654 468999999765 4568
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|+||||.++... ...+.+.++++. .+ .++.++ .|++..||.+|+.+
T Consensus 570 TIreNI~~g~~~----~~~e~i~~al~~---a~------------------------l~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLTD----TPDEEIMAAAKA---AN------------------------AHDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCCC----CCHHHHHHHHHH---cC------------------------CHHHHH--hCCCccCCcccCCC-
Confidence 999999987421 111222222111 10 011122 36677899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
..||||||||++||||++++|+|++||||||+||+.+...+.+ .. . ..+.+++.++|.. ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~---~-~~~~TvIiItHrl-~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR---S-RASRTVLLIAHRL-STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh---c-cCCCeEEEEeccH-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999998877 22 1 2345566666665 456789999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
+|+++|+++++++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999865
No 425
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.05 Aligned_cols=210 Identities=22% Similarity=0.357 Sum_probs=172.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999998754322 35699999998888889
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.++..-.. +. . .. ........++.+++.+||++..++. +
T Consensus 97 tv~~~~~~~~~~~~-~~----~-------------~~------------~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (265)
T PRK10253 97 TVQELVARGRYPHQ-PL----F-------------TR------------WRKEDEEAVTKAMQATGITHLADQS-----V 141 (265)
T ss_pred cHHHHHHhCccccc-cc----c-------------cC------------CCHHHHHHHHHHHHHcCCHHHhcCC-----c
Confidence 99999987531000 00 0 00 0001123456788999998766644 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++... .++++++++|+..++.+++|+|++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999987542 3567777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 426
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-33 Score=348.71 Aligned_cols=216 Identities=27% Similarity=0.322 Sum_probs=178.6
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 377888887763 24699999999999999999999999999999999998653 479999999875
Q ss_pred cc----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000540 926 KQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..+++.+||++|++.+++.+||.||+.+....+........+.++.+.++++.++|.+..++.+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 32 1234579999999988999999999987532111111223344556889999999987666653 46999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEE
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYV 1081 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~ 1081 (1433)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||++. ++.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999997 577666
Q ss_pred CC
Q 000540 1082 GP 1083 (1433)
Q Consensus 1082 G~ 1083 (1433)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 54
No 427
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=321.85 Aligned_cols=209 Identities=25% Similarity=0.369 Sum_probs=171.7
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 5999999999999999999999999999999999999987 9999999998754322 356999999877888899
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
|.||+.++.... ... .+. . ....+..++.+++.+||++..++.+ +
T Consensus 102 v~e~l~~~~~~~-~~~--------------~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGA--------------LGR-F--------------GAADREKVEEAISLVGLKPLAHRLV-----D 146 (265)
T ss_pred HHHHHHhCcccc-ccc--------------ccC-C--------------CHHHHHHHHHHHHHcCCHHHhcCCc-----c
Confidence 999998753210 000 000 0 0011234577889999987666554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... .++++++++|+..++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 69999999999999999999999999999999999999999999987543 24667778899999999999999999999
Q ss_pred EEEecCHHHHH
Q 000540 403 IVYQGPRELVL 413 (1433)
Q Consensus 403 iv~~G~~~~~~ 413 (1433)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999987763
No 428
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.7e-33 Score=316.84 Aligned_cols=198 Identities=25% Similarity=0.357 Sum_probs=167.6
Q ss_pred EeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc---ccccceEEEeecCCCCCCCCCHH
Q 000540 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 950 (1433)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 950 (1433)
+|+|+|+++++||+++|+|+||||||||+++|+|... . +|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 2 7999999987542 12345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCeEEEe
Q 000540 951 ESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1023 (1433)
Q Consensus 951 E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~-------~p~iLlLD 1023 (1433)
||+.+.... .......++.++++++.++|.+..++.+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333456789999999987766653 5699999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1024 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.||++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999986 57789999999986 6888888753
No 429
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=320.03 Aligned_cols=211 Identities=21% Similarity=0.311 Sum_probs=167.7
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5899999999999999999999999999999999998741 01289999999987531 1235799999987777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ .||+||+.|+.+..+.... ..+....++.+++.+||.+...... +
T Consensus 113 ~-~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 P-KSIYENVAYGPRIHGLARS--------------------------------KAELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred C-CcHHHHHHHHHHhcccccc--------------------------------hHHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 4999999987543221000 0001224567788889864221111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..++.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.++++++|+..++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 356777888999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 430
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=319.90 Aligned_cols=213 Identities=22% Similarity=0.256 Sum_probs=173.1
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999987763 24699999999999999999999999999999999997542 13479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGL 993 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1433)
.+... ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999888775 99999987654332 122 23456788999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEE-EE
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1072 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~-~L 1072 (1433)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 357999999999999999999999999999999999999999999999976 489999999986 5677899975 56
Q ss_pred ecCcEEEEECCC
Q 000540 1073 KRGGYEIYVGPL 1084 (1433)
Q Consensus 1073 ~~Gg~~~y~G~~ 1084 (1433)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 75 788888874
No 431
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=5.9e-33 Score=313.32 Aligned_cols=205 Identities=26% Similarity=0.402 Sum_probs=172.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHH
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVR 244 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1433)
++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 5999999999999999999999999999999999999987 9999999998765333 35799999998888889999
Q ss_pred HHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccC
Q 000540 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGI 324 (1433)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~L 324 (1433)
||+.+..+..+... ......++++++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99988654321100 001123467788899976666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 000540 325 SGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIV 404 (1433)
Q Consensus 325 SGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv 404 (1433)
|||||||++||++|+.+|++++|||||+|||..+...+.+.|++... ..+.++++++|...++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998654 33566777888888899999999999999999
Q ss_pred EecCHHHHH
Q 000540 405 YQGPRELVL 413 (1433)
Q Consensus 405 ~~G~~~~~~ 413 (1433)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988774
No 432
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.2e-33 Score=320.43 Aligned_cols=216 Identities=23% Similarity=0.305 Sum_probs=173.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC--------ccceEEEecCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV--------PERTAAYISQHDN 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 236 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35899999999999999999999999999999999999875223699999999875321 1346999999988
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
+++.+||+||+.++..... . ..... ... ...+.+..++++++.+||++..+..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8888999999987642100 0 00000 000 00112235678899999987666544
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+. .++++++++|+..++.+++|+|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999987643 35677778899999999999999
Q ss_pred EEcCCeEEEecCHHHH
Q 000540 397 LLSNGQIVYQGPRELV 412 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~ 412 (1433)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 433
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-33 Score=313.53 Aligned_cols=202 Identities=22% Similarity=0.371 Sum_probs=169.6
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc-cceEEEecCCCCCCCCCCHHHHHH
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1433)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998764332 357999999988888899999998
Q ss_pred HhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhh
Q 000540 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQ 328 (1433)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGq 328 (1433)
++... ..... ...+..++++++.+||++..++.+ +.|||||
T Consensus 94 ~~~~~-~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN---------------------------------AAQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccCCC---------------------------------HHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 00000 001234677899999987777554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEecC
Q 000540 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVYQGP 408 (1433)
Q Consensus 329 kqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~~G~ 408 (1433)
|||++||++++.+|++++|||||+|||+.++..+.+.|+++.+.. ++++++++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999875433 4567778899999999999999999999999999
Q ss_pred HHHHHH
Q 000540 409 RELVLE 414 (1433)
Q Consensus 409 ~~~~~~ 414 (1433)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887753
No 434
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6.6e-33 Score=316.40 Aligned_cols=215 Identities=26% Similarity=0.266 Sum_probs=171.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP- 924 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 924 (1433)
.++++|+++.++ ...+|+|+|++|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccc
Confidence 367888887653 23589999999999999999999999999999999998653 47999999876
Q ss_pred ----Cccc-------cccceEEEeecCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000540 925 ----KKQE-------TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP-LKQSL 990 (1433)
Q Consensus 925 ----~~~~-------~~~~~~gyv~Q~~~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 990 (1433)
.... ..++.++|++|++. ..+.+|+.||+.+..... .. ......++.++++++.+++.+ ..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3211 12346899999974 345679999987542211 11 111233456788999999963 55554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1069 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v 1069 (1433)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998654 899999999986 577789999
Q ss_pred EEEecCcEEEEECCC
Q 000540 1070 FLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1070 ~~L~~Gg~~~y~G~~ 1084 (1433)
++|++ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 688888875
No 435
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-34 Score=330.57 Aligned_cols=211 Identities=24% Similarity=0.349 Sum_probs=178.0
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++||+++++.+ +.++|+|+|+++++||.+||+|+||||||||++.|.|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998743 3479999999999999999999999999999999999765 3489999999886
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQS-------LVGLPG 995 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~ 995 (1433)
.. ...++.+++++|...++ .-|+++||..+. ++.+ ++.++++++.+||.++... .+|+ +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 33566789999987665 469999997642 2333 3457899999999875443 3454 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
.+.||||||||++|||+|+++.++++|||||.|||+.|+++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999988764 899999999976 4688999999997
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 788998875
No 436
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=315.55 Aligned_cols=210 Identities=21% Similarity=0.323 Sum_probs=166.2
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222389999999987431 1245799999987766
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ +||+||+.++....+.... ......++.+++.+++.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999987543221000 001123456677777743211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+.++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++..+ + .++++++|+..++.+.||+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 44567999999999999999999999999999999999999999999998742 3 56777889989999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 437
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-33 Score=317.84 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=172.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1433)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899987763 24699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCc-----cccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.+.. ....++.++|++|++.+++ .|+.||+.+....+. .. ...++.+.++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1233567999999988877 599999987653321 11 1233456677888877431111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec---
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1074 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~--- 1074 (1433)
.||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 68889999999982
Q ss_pred -----CcEEEEECCC
Q 000540 1075 -----GGYEIYVGPL 1084 (1433)
Q Consensus 1075 -----Gg~~~y~G~~ 1084 (1433)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4788998875
No 438
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.8e-33 Score=317.92 Aligned_cols=208 Identities=28% Similarity=0.411 Sum_probs=171.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 34699999997778889
Q ss_pred CHHHHHHHhhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 000540 242 TVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEM 320 (1433)
Q Consensus 242 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~ 320 (1433)
||+||+.++.. ... .. . .+ ..+....++.+++.+||.+..++.+
T Consensus 91 tv~e~l~~~~~~~~~----------~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (256)
T TIGR03873 91 TVRDVVALGRIPHRS----------LW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM---- 135 (256)
T ss_pred CHHHHHHhcchhhhh----------hc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 99999988531 000 00 0 00 0011224567888999976666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 000540 321 IRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN 400 (1433)
Q Consensus 321 ~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~ 400 (1433)
..||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.. . ++++++++|+..++.+++|+|++|++
T Consensus 136 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 136 -STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998753 3 56778888999999999999999999
Q ss_pred CeEEEecCHHHHH
Q 000540 401 GQIVYQGPRELVL 413 (1433)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1433)
|+++..|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999988763
No 439
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-33 Score=318.78 Aligned_cols=209 Identities=26% Similarity=0.371 Sum_probs=171.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 35999999999999999999999999999999999999887 9999999998754322 35699999998788889
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||.||+.++..... .. .... ..+....++.+++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~----------------~~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SL----------------WGRL------------SAEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hh----------------ccCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988631000 00 0000 0011234567888999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. . ++++++++|+..++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999988653 3 567777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999988763
No 440
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=347.15 Aligned_cols=206 Identities=24% Similarity=0.309 Sum_probs=172.8
Q ss_pred ceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCCCCCCC
Q 000540 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQNDIHSPF 946 (1433)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~ 946 (1433)
++.+|+|||+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999998653 479999999875421 234568999999988899
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000540 947 VTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1433)
Q Consensus 947 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPT 1026 (1433)
+||+||+.+..........+..+..+.++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987532111111123334456889999999987777664 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1027 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |+++..|+..
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 219 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLA 219 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChh
Confidence 999999999999999999878999999999986 57788999999996 6888888864
No 441
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-33 Score=384.83 Aligned_cols=213 Identities=23% Similarity=0.321 Sum_probs=169.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---------------------------------------
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--------------------------------------- 205 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 205 (1433)
.++|+|+|++|+||+.+||+||||||||||+++|.|+++|.
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999982
Q ss_pred ------------CCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHH
Q 000540 206 ------------LKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARRE 270 (1433)
Q Consensus 206 ------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 270 (1433)
...+|+|++||+++++... ++.++||+|++.+ ++.|++|||.++.. ....+.+.++++..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~L-F~gTIreNI~~g~~----~at~eeI~~A~k~A 1335 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPML-FNMSIYENIKFGKE----DATREDVKRACKFA 1335 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcc-ccccHHHHHhcCCC----CCCHHHHHHHHHHc
Confidence 0138999999999987654 5789999998654 57899999999742 11223333333221
Q ss_pred HhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecC
Q 000540 271 KAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEI 350 (1433)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEp 350 (1433)
+ +++. +..|++.+||.||+.+. .||||||||++|||||+++|+||+||||
T Consensus 1336 ---~------------------------l~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1336 ---A------------------------IDEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred ---C------------------------CHHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 1 0111 23589999999997665 5999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC----CeEE-EecCHHHHHH
Q 000540 351 STGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSN----GQIV-YQGPRELVLE 414 (1433)
Q Consensus 351 tsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~----G~iv-~~G~~~~~~~ 414 (1433)
||+||+.++..|.+.|++.....+ .+++++.|.. ++.+.||+|++|++ |+++ ++|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~-~TvIiIaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKAD-KTIITIAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCC-CEEEEEechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 999999999999999987632223 4455566654 66788999999999 9955 8999999863
No 442
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-33 Score=315.24 Aligned_cols=212 Identities=21% Similarity=0.284 Sum_probs=169.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
..+|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|+..+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++.+||+||+.++.+..+.... .+.+..++.+++.+|+........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 8889999999876432210000 001123566788888854211111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + +++++++|+..++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 134557999999999999999999999999999999999999999999998753 3 5777788999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+++++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 443
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.1e-33 Score=310.84 Aligned_cols=195 Identities=23% Similarity=0.366 Sum_probs=162.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-----CccceEEEecCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHIG 239 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 239 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999999987 99999999987421 11357999999988888
Q ss_pred CCCHHHHHHHhhH-hcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 240 EMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
.+||+||+.++.. .++.. ..+....++.+++.+||++..++.
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~--- 132 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------------------------------KAEAEERALELLEKVGLADKADAY--- 132 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhhC---
Confidence 8999999988642 11100 001123456778899998766654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++.+++|+|++|
T Consensus 133 --~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 133 --PAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred --ccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 457999999999999999999999999999999999999999999998754 3 456777889999999999999999
Q ss_pred cCCeE
Q 000540 399 SNGQI 403 (1433)
Q Consensus 399 ~~G~i 403 (1433)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 444
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-33 Score=321.30 Aligned_cols=211 Identities=19% Similarity=0.282 Sum_probs=173.2
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... ..|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988742 12358999999999999999999999999999999999865 269999999876
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGL------PGV 996 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 996 (1433)
.. ...++.++|++|++.+++ .|++||+.... ... ++.++++++.+||.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234567999999999887 49999995321 111 23467888999998766655431 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++|||||+.+|+||+|||||++||+.+...+++.|++.. .++|||+++|+++ .+ ..||++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999985 34 45999999986 6
Q ss_pred EEEEECCCC
Q 000540 1077 YEIYVGPLG 1085 (1433)
Q Consensus 1077 ~~~y~G~~~ 1085 (1433)
++++.|++.
T Consensus 213 ~i~~~g~~~ 221 (275)
T cd03289 213 KVRQYDSIQ 221 (275)
T ss_pred eEeecCCHH
Confidence 889999863
No 445
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.4e-33 Score=311.88 Aligned_cols=202 Identities=23% Similarity=0.361 Sum_probs=165.7
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEc
Confidence 478899987753 24699999999999999999999999999999999997653 479999999865
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVSGLST 1001 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1001 (1433)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 123567899999988876 5999999875433211 11 124567899999995 355554 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1002 GqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ .+ +.||++++|++.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~ 213 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPH 213 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecc
Confidence 9999999999999999999999999999999999999999998754 899999999986 34 569999999643
No 446
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.9e-33 Score=364.87 Aligned_cols=208 Identities=27% Similarity=0.420 Sum_probs=167.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
.++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+ ++.
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~l-f~~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRL-FYG 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhh-hhh
Confidence 35899999999999999999999999999999999999998 9999999999887654 4789999997654 457
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|++|||.++... ...+.+.++++. .+ .++.+ -.|++..||.+|+.+.
T Consensus 554 TI~eNi~~~~~~----~~~~~i~~a~~~---~~------------------------l~~~i--~~lp~gl~T~i~e~G~ 600 (694)
T TIGR03375 554 TLRDNIALGAPY----ADDEEILRAAEL---AG------------------------VTEFV--RRHPDGLDMQIGERGR 600 (694)
T ss_pred hHHHHHhCCCCC----CCHHHHHHHHHH---cC------------------------hHHHH--HhCcccccceecCCCC
Confidence 999999986320 111222222111 00 11112 2467888999998654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+||||||||++||||++++|++++||||||+||+.++..|.+.|++.. .+ .+++.++|.. ++.+.||+|++|++|
T Consensus 601 -~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~-~T~iiItHrl-~~~~~~D~iivl~~G 675 (694)
T TIGR03375 601 -SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AG-KTLVLVTHRT-SLLDLVDRIIVMDNG 675 (694)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CC-CEEEEEecCH-HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998753 23 4455556654 466899999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999875
No 447
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.6e-33 Score=307.97 Aligned_cols=199 Identities=21% Similarity=0.326 Sum_probs=166.1
Q ss_pred eecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-ccceEEEecCCCCCCCCCCHHH
Q 000540 167 ILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-PERTAAYISQHDNHIGEMTVRE 245 (1433)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1433)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999988 999999999875432 2467999999988888899999
Q ss_pred HHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccccCC
Q 000540 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRGIS 325 (1433)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~LS 325 (1433)
|+.+..... .... .+.+..++++++.+||++..++. ++.||
T Consensus 90 n~~~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKLN---------------------------------AEQQEKVVDAAQQVGIADYLDRL-----PEQLS 130 (213)
T ss_pred HHHhHhhcc-CCcc---------------------------------HHHHHHHHHHHHHcCcHHHhhCC-----cccCC
Confidence 998753210 0000 00122356788999998766654 45799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 000540 326 GGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQIVY 405 (1433)
Q Consensus 326 GGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~iv~ 405 (1433)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..++++++++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998754 335677778899999999999999999999998
Q ss_pred ecC
Q 000540 406 QGP 408 (1433)
Q Consensus 406 ~G~ 408 (1433)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 448
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=314.61 Aligned_cols=212 Identities=18% Similarity=0.268 Sum_probs=168.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|....+|+|+++|+++.+... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 358999999999999999999999999999999999975311228999999998865322 357999999877776 7
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+||+.++.+.++.... .......++.+++.+||........ ++.+
T Consensus 94 tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999986533211000 0011223567788889853221111 2345
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . ++++++++|+..++.+.+|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcEEEEEECC
Confidence 6799999999999999999999999999999999999999999999864 2 467777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 449
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.9e-32 Score=353.58 Aligned_cols=212 Identities=27% Similarity=0.400 Sum_probs=175.7
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++++|++|+++. +.+.+|+|+|++++|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 46999999998742 224589999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
.++ ..+++.++||+|++.+++ -|++||+.++. .+.+ ++.+.++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 356778999999988775 69999997631 1222 2345667777766543 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.||++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999885 5899999999986 4567999999987
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 789999984
No 450
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=314.38 Aligned_cols=219 Identities=21% Similarity=0.259 Sum_probs=174.4
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367888887652 2469999999999999999999999999999999999643 1 12479999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1433)
.++.. ...++.++|++|++.+++. |+.||+.+...... ....+..++.+.++++.+++.+........ .+.
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87532 1235679999999888874 99999987643221 112233455678889999885422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999986 68888999999986 68
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 8888875
No 451
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=316.83 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=167.9
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 58999999999999999999999999999999999987410 1389999999987421 1235799999998888
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+.+||+||+.++....+... ..+.+..++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------------------------------KKDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 89999999988654321000 0011224566788888842111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+++.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 56777889999999999999999
Q ss_pred c------CCeEEEecCHHHHH
Q 000540 399 S------NGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1433)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999998774
No 452
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.1e-32 Score=357.71 Aligned_cols=212 Identities=27% Similarity=0.416 Sum_probs=177.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+|++|+++. +.+++|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 234699999999999999999999999999999999998764 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
.++ ..+++.++||+|++.+++ -|++||+.++. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADD----EEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCH----HHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 456788999999998876 59999997641 12222 346677777776543 34555554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+++++.+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 36799999999999999999999999999999999999999999999886 4899999999986 4678999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 789999974
No 453
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1e-33 Score=359.44 Aligned_cols=212 Identities=28% Similarity=0.427 Sum_probs=176.9
Q ss_pred CceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCc
Q 000540 844 PHSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGY 923 (1433)
Q Consensus 844 ~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1433)
...++|+||+|.++. ++++|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCE
Confidence 346999999999852 35799999999999999999999999999999999998764 4899999998
Q ss_pred cCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccC
Q 000540 924 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELK-------PLKQSLVGL 993 (1433)
Q Consensus 924 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~ 993 (1433)
++++ ..+++.++||+|++.++. -||+||+.++. .+.+++ .++++++..++. +-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDE----EIEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHH----HHHHHHHHhChHHHHHhCcccccceecC
Confidence 8754 456788999999998887 89999998752 123333 344555544333 346778884
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+...||||||||++||||++++|+||+||||||+||+++...|++.++++. +|+|+|+++|+++ ....+|+|++|+
T Consensus 462 -~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~ 537 (567)
T COG1132 462 -RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD 537 (567)
T ss_pred -CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE
Confidence 346799999999999999999999999999999999999999999999876 5789999999986 345599999999
Q ss_pred cCcEEEEECCC
Q 000540 1074 RGGYEIYVGPL 1084 (1433)
Q Consensus 1074 ~Gg~~~y~G~~ 1084 (1433)
+ |+++..|+.
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 7 679999985
No 454
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=313.44 Aligned_cols=216 Identities=22% Similarity=0.290 Sum_probs=173.9
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--ce--EEEEEEEc
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GY--ITGNIKVS 921 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~~--~~G~i~i~ 921 (1433)
.+.++|+++++. ++.+|+|+||++++||+++|+|+||||||||+++|+|...+ |. +.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 377888887653 35699999999999999999999999999999999997542 21 23667676
Q ss_pred CccCcc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000540 922 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSLVGLP 994 (1433)
Q Consensus 922 g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 994 (1433)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++.++.+.++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665432 2345679999999999999999999988643321 1123344456788999999864 23332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||++. .+.+.||++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 699999999986 56688999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 688888875
No 455
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=316.34 Aligned_cols=210 Identities=20% Similarity=0.307 Sum_probs=166.5
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999986 3212389999999987531 1235799999988777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+. ||+||+.|+.+..+.... .+...+++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 64 999999886533211000 011123456777888753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--E-KYTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEEcCHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 2 356777888889999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999999864
No 456
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.2e-32 Score=313.35 Aligned_cols=219 Identities=25% Similarity=0.290 Sum_probs=169.9
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++ ++.+|+|+|++|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56778877653 24699999999999999999999999999999999997321135799999998753
Q ss_pred cc---c-ccceEEEeecCCCCCCCCCHHHHHHHHHH-hcC--CC-CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000540 927 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAW-LRL--PP-EIDSETRKMFIGEVMELVELK-PLKQSLVGLPGVS 997 (1433)
Q Consensus 927 ~~---~-~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~-lr~--~~-~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1433)
.. . .++.++|++|++.+++.+|+.+++.+... ++. .. .......++.+++.++.+++. +..++.+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 22468999999988888887776653211 110 00 011222345678889999985 44444321 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-cCEEEEEecCc
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1076 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~-~D~v~~L~~Gg 1076 (1433)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||++||++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 34454 899999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 88898875
No 457
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=314.26 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=167.3
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998751 113899999999875321 23569999999877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ +|++||+.|+....+.... .+...+++.+++.+||.+......
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 76 8999999987543221000 011123456778888742111111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..++.||||||||++||++++.+|++++|||||+|||+.++.++.+.|++... + .++++++|+..++.+++|++++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEE
Confidence 234567999999999999999999999999999999999999999999998743 3 5677788888999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999998874
No 458
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=316.87 Aligned_cols=209 Identities=21% Similarity=0.310 Sum_probs=164.0
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 106 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPF 106 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccc
Confidence 58999999999999999999999999999999999986310 1289999999987421 1235699999998777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ .||+||+.+++...+... +.+..++.+++.+++....+... +
T Consensus 107 ~-~tv~enl~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 149 (269)
T PRK14259 107 P-KSIYENIAFGARINGYTG-----------------------------------DMDELVERSLRKAAVWDECKDKL-N 149 (269)
T ss_pred h-hhHHHHHhhhhhhcCCcH-----------------------------------HHHHHHHHHHHHhCCcchhhhhh-C
Confidence 7 599999998764322100 00112345566666642111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. . +.++++++|+..++.++||++++|
T Consensus 150 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~i~~l 226 (269)
T PRK14259 150 ESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--K-NFTIVIVTHNMQQAVRVSDMTAFF 226 (269)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHHhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 2 356778889999999999999999
Q ss_pred cC-----------CeEEEecCHHHHHH
Q 000540 399 SN-----------GQIVYQGPRELVLE 414 (1433)
Q Consensus 399 ~~-----------G~iv~~G~~~~~~~ 414 (1433)
++ |++++.|+++++.+
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred eccccccccccccceEEEeCCHHHHHh
Confidence 96 67899999988753
No 459
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2e-33 Score=365.59 Aligned_cols=208 Identities=25% Similarity=0.328 Sum_probs=166.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1433)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|++.+ ++.
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l-f~g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYI-FSG 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCcee-hhH
Confidence 35899999999999999999999999999999999999998 9999999999877654 4689999998655 567
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
||+|||.++.+. ....+.+.++++.. + .++.+ ..++...||.||+.+
T Consensus 563 TI~eNi~l~~~~---~~~~~~i~~a~~~a---~------------------------l~~~i--~~lp~gldt~i~e~G- 609 (708)
T TIGR01193 563 SILENLLLGAKE---NVSQDEIWAACEIA---E------------------------IKDDI--ENMPLGYQTELSEEG- 609 (708)
T ss_pred HHHHHHhccCCC---CCCHHHHHHHHHHh---C------------------------CHHHH--HhcccccCcEecCCC-
Confidence 999999986321 11112222222111 0 11111 247778899999765
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
.+||||||||++||||++++|++|+||||||+||+.++..+.+.|++. .++ +++.++|.. ++.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~-T~IiitHr~-~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDK-TIIFVAHRL-SVAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCC-EEEEEecch-HHHHcCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999863 234 455566655 466889999999999
Q ss_pred eEEEecCHHHHHH
Q 000540 402 QIVYQGPRELVLE 414 (1433)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1433)
++++.|+++++++
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999865
No 460
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-34 Score=293.58 Aligned_cols=207 Identities=24% Similarity=0.357 Sum_probs=178.3
Q ss_pred CCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc---ccccceEEEeecCCCCCC
Q 000540 869 DDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ---ETFARISGYCEQNDIHSP 945 (1433)
Q Consensus 869 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~ 945 (1433)
++.+.+|+|+|..|++|.+|+|+|||||||||||.+++++.+ ..+|+|.++|.+... ..+++.++..-|+.....
T Consensus 11 y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~ 88 (252)
T COG4604 11 YGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINS 88 (252)
T ss_pred hCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhh
Confidence 356789999999999999999999999999999999998765 347999999998643 345667788889888888
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000540 946 FVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1433)
Q Consensus 946 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEP 1025 (1433)
.+||+|-+.|+..-.... ...++.+..++++++.++|.++.|+.. .+||||||||.-||+.|+.+.+.++||||
T Consensus 89 rlTV~dLv~FGRfPYSqG-Rlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEP 162 (252)
T COG4604 89 RLTVRDLVGFGRFPYSQG-RLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEP 162 (252)
T ss_pred eeEHHHHhhcCCCcccCC-CCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCc
Confidence 899999999974322222 223455667999999999999999874 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1026 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
.++||...+..+|+.||+++++ |+|||++.||.+. ...++|+|+-|++ |+++..|++.
T Consensus 163 LNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 163 LNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred ccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 9999999999999999999976 9999999999874 4456799999997 7999999985
No 461
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4e-33 Score=304.08 Aligned_cols=179 Identities=25% Similarity=0.324 Sum_probs=150.2
Q ss_pred ceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc-----ccccceEEEeecCCC-CC
Q 000540 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ-----ETFARISGYCEQNDI-HS 944 (1433)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 944 (1433)
++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 34699999999999999999999999999999999998653 47999999987531 123557899999973 33
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000540 945 PFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1433)
Q Consensus 945 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDE 1024 (1433)
...||+||+.+..... .....+.++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998865432 1233344456889999999988777764 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000540 1025 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1059 (1433)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1059 (1433)
||+|||+.++..+.+.|++++++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 462
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.5e-33 Score=356.64 Aligned_cols=210 Identities=22% Similarity=0.342 Sum_probs=177.5
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999998841 23599999999999999999999999999999999998764 37999999988
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLK-------QSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1433)
.++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4567889999999999875 9999998742 122 23477888888876533 4455543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|+|+++|+++ ....||+|++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998864 799999999985 5677999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 789998885
No 463
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-33 Score=300.42 Aligned_cols=170 Identities=29% Similarity=0.419 Sum_probs=148.7
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++ .+.+++|+|+++++||+++|+||||||||||+++|+|..+. .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5677776552 24699999999999999999999999999999999997653 47999999987532
Q ss_pred -----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000540 928 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTE 1002 (1433)
Q Consensus 928 -----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1433)
...++.++|++|++.+++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999998531 8999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1003 qrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999986 566789999999875
No 464
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.5e-33 Score=306.99 Aligned_cols=198 Identities=29% Similarity=0.375 Sum_probs=163.7
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|++..++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCc
Confidence 56778876652 34699999999999999999999999999999999997653 4799999998653
Q ss_pred cccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000540 927 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKR 1006 (1433)
Q Consensus 927 ~~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1433)
....++.++|++|++.+++.+||.||+.+....+. .. ++.+.++++.++|.+..+..+ ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22245678999999888889999999987543321 11 134788999999987666553 4699999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 1007 l~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+ |+++.++.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~--~~~~~~~~ 200 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLPG--ARELDLGP 200 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhcc--CcEEeecC
Confidence 99999999999999999999999999999999999998777999999999986 3433 88877743
No 465
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.9e-33 Score=312.54 Aligned_cols=209 Identities=26% Similarity=0.385 Sum_probs=166.2
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCc
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKK 926 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1433)
++++|+++.++. ..+.+|+|+|+++++|++++|+||||||||||+++|+|...+ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 667788766521 124599999999999999999999999999999999998653 4799999998653
Q ss_pred c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000540 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVG------LPGVS 997 (1433)
Q Consensus 927 ~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 997 (1433)
. ...++.++|++|++.+++ .|+.|++.+... ... +..+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 123457899999988776 699999976321 111 2235678888888776665431 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||++. . .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~-~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS-L-LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH-H-HHhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 89999999986 3 479999999997 56
Q ss_pred EEEEC
Q 000540 1078 EIYVG 1082 (1433)
Q Consensus 1078 ~~y~G 1082 (1433)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 66543
No 466
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=356.46 Aligned_cols=213 Identities=22% Similarity=0.300 Sum_probs=177.4
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++++|++|+++. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999998752 124699999999999999999999999999999999998764 47999999988
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
.++ ..+++.++|++|++.+++ -|++||+.++. +.+.+ ++.++++++..++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 653 356778999999998876 69999997641 11122 2346677777776543 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
...||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999875 4799999999985 5678999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 788998884
No 467
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=7.2e-33 Score=304.06 Aligned_cols=194 Identities=23% Similarity=0.282 Sum_probs=160.1
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEccc
Confidence 4567766542 34699999999999999999999999999999999997653 47999999987532
Q ss_pred --ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000540 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRK 1005 (1433)
Q Consensus 928 --~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1433)
..+++.++|++|++.+++.+|+.||+.+....+. . + ++.+.++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 1234678999999888888999999987643321 1 1 234678999999988777654 469999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEE
Q 000540 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1071 (1433)
Q Consensus 1006 Rl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~ 1071 (1433)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++.. ..+|+++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~---~~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG---LVEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc---ccceEEee
Confidence 9999999999999999999999999999999999999987779999999999752 23576654
No 468
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=313.49 Aligned_cols=216 Identities=21% Similarity=0.229 Sum_probs=173.9
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC--c-eEEEEEEEc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNIKVS 921 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 921 (1433)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + ..+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3588999988763 24699999999999999999999999999999999997542 1 258999999
Q ss_pred CccCc----c---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000540 922 GYPKK----Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKP----LKQSL 990 (1433)
Q Consensus 922 g~~~~----~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 990 (1433)
|.+.. . ..+++.++|++|++.+++. |++||+.+...... . ......++.+.++++.+++.+ ..++.
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-V-KRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-C-ChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87642 1 1245678999999988875 99999987643321 1 111222445778888887742 22332
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEE
Q 000540 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1070 (1433)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~ 1070 (1433)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 357999999999999999999999999999999999999999999999865 699999999986 5778999999
Q ss_pred EEecCcEEEEECCC
Q 000540 1071 LMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1071 ~L~~Gg~~~y~G~~ 1084 (1433)
+|++ |+++..|+.
T Consensus 232 ~l~~-G~i~~~g~~ 244 (265)
T PRK14252 232 YMYM-GELIEFGAT 244 (265)
T ss_pred EEEC-CEEEEeCCH
Confidence 9986 788888875
No 469
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.2e-33 Score=317.32 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=160.5
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++.. +++.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhh
Confidence 567777665310 124689999999999999999999999999999999998653 47999999977532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCC
Q 000540 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSL-------VGLPGVS 997 (1433)
Q Consensus 928 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~~~ 997 (1433)
...++.++|++|++.+++ .||+|++.+.... ...+ .+.+.++..++.+..+.+ .. ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPD-----ATDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCC-----CCHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456999999987776 6999999764211 1111 122333333332221111 11 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.||++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999987 7999999999986 34 48999999997 67
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 8888874
No 470
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.70 Aligned_cols=211 Identities=20% Similarity=0.335 Sum_probs=167.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998741 11389999999987532 124579999998877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ .||+||+.++....+.... ...+..+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-H
Confidence 76 8999999986533211000 00112345667777875421111 2
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..+++||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++..+ +.++++++|+..++.+++|+|++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE---NYTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc---CcEEEEEeCCHHHHHHhCCEEEE
Confidence 345568999999999999999999999999999999999999999999998642 35777788888889999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|+++..|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999998774
No 471
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=316.19 Aligned_cols=211 Identities=24% Similarity=0.307 Sum_probs=169.1
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCCC----ccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEFV----PERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 45899999999999999999999999999999999998751 013899999999875431 245799999987777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ +||+||+.++.+...... ..+....+..+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVP---------------------------------RKEFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 6 899999988643211000 0011123456678888865432222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + .++++++|+..++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998643 3 67778889999999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 472
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.3e-33 Score=352.39 Aligned_cols=212 Identities=27% Similarity=0.404 Sum_probs=177.8
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999998742 123689999999999999999999999999999999998763 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLK------QSLVGLPG 995 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~~ 995 (1433)
.++ ..+++.++||+|++.+++ -|++||+.++. + +. .++.++++++.+++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 346778999999998876 59999998742 1 12 234578889999987653 4455543
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 996 ~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
...||||||||++|||||+++|++|+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 46799999999999999999999999999999999999999999999885 5899999999986 3467999999996
Q ss_pred cEEEEECCC
Q 000540 1076 GYEIYVGPL 1084 (1433)
Q Consensus 1076 g~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 788888874
No 473
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-33 Score=315.93 Aligned_cols=209 Identities=25% Similarity=0.322 Sum_probs=162.3
Q ss_pred eEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCcc
Q 000540 848 TFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQ 927 (1433)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1433)
+++|+++.++. .+..+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 56777766531 113589999999999999999999999999999999998653 47999999976532
Q ss_pred ---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000540 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRK-----MFIGEVMELV--ELKPLKQSLVGLPGVS 997 (1433)
Q Consensus 928 ---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 997 (1433)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 233567899999988776 6999999764321 1111111 1133444444 444444433 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcE
Q 000540 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGY 1077 (1433)
Q Consensus 998 ~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~ 1077 (1433)
.||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||++. ++ +.||++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999986 45 45999999997 57
Q ss_pred EEEECCC
Q 000540 1078 EIYVGPL 1084 (1433)
Q Consensus 1078 ~~y~G~~ 1084 (1433)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 7777764
No 474
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.5e-32 Score=314.23 Aligned_cols=206 Identities=23% Similarity=0.362 Sum_probs=168.3
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCee-----CCCCCc-------cceEEEecC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHN-----MDEFVP-------ERTAAYISQ 233 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5899999999999999999999999999999999999988 9999999987 554322 236999999
Q ss_pred CC--CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-
Q 000540 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1433)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1433)
++ .+.+.+|+.||+.+.....+.. .. .+....++++++.+|+.+
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 86 3567789999997643211000 00 011224567888999964
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 000540 311 CADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYN 390 (1433)
Q Consensus 311 ~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1433)
..++ .+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.. ..+.++++++|+..++.+
T Consensus 144 ~~~~-----~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDD-----LPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhC-----CCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 4443 3457999999999999999999999999999999999999999999998754 335677888999999999
Q ss_pred hcCeEEEEcCCeEEEecCHHHHH
Q 000540 391 LFDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 391 ~~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 475
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.17 Aligned_cols=212 Identities=20% Similarity=0.301 Sum_probs=167.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCCC-----ccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ |....+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 358999999999999999999999999999999999976 21113899999998875321 24579999998877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++. ||+||+.++....+.... ..+.+..++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------------------------------KKKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHh-
Confidence 775 999999886432211000 0001123566788899865322222
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. . +.++++++|+..++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEE
Confidence 23456799999999999999999999999999999999999999999999863 2 46777788998999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 476
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=9.2e-33 Score=329.86 Aligned_cols=211 Identities=29% Similarity=0.378 Sum_probs=178.5
Q ss_pred ccceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCC-----CccceEEEecCCC--
Q 000540 163 QHLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHD-- 235 (1433)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d-- 235 (1433)
....+++||||++++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+.+.. ..++.+-+|+||+
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4567999999999999999999999999999999999999998 99999999872111 1135677888874
Q ss_pred CCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 000540 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTV 315 (1433)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1433)
.+.|.+||+++|.......+... ..+.+.+++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 67899999999987665432110 11233468889999999842
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 000540 316 VGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDI 395 (1433)
Q Consensus 316 vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1433)
..++++.+||||||||++|||||+.+|+++++|||||+||++++.++++.|+++.++ .+.+.+.|+|+..-+..+||||
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e-~g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE-LGLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHhhCceE
Confidence 445788899999999999999999999999999999999999999999999997654 4678888999999999999999
Q ss_pred EEEcCCeEEEecCHHHHHH
Q 000540 396 ILLSNGQIVYQGPRELVLE 414 (1433)
Q Consensus 396 ivL~~G~iv~~G~~~~~~~ 414 (1433)
+||.+|+||+.||.+++.+
T Consensus 501 ~vm~~G~iVE~G~~~~v~~ 519 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVFE 519 (539)
T ss_pred EEEECCeEEEeCCHHHHhc
Confidence 9999999999999998843
No 477
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.8e-32 Score=312.66 Aligned_cols=209 Identities=23% Similarity=0.283 Sum_probs=167.1
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEECCeeCCCCCc-cceEEEecCCCC--CCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HIGEM 241 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 241 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.+++.... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998810 028999999998754322 257999999864 44567
Q ss_pred CHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 000540 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMI 321 (1433)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~ 321 (1433)
|+.+++.+.++..+.. .....++.+++.+||.+.. +.. +..+
T Consensus 97 ~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~l~~~~l~~~~-~~~-~~~~ 138 (254)
T PRK10418 97 TMHTHARETCLALGKP------------------------------------ADDATLTAALEAVGLENAA-RVL-KLYP 138 (254)
T ss_pred cHHHHHHHHHHHcCCC------------------------------------hHHHHHHHHHHHcCCCChh-hhh-hcCC
Confidence 9999987643221110 0012356678899987521 111 2344
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 000540 322 RGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNG 401 (1433)
Q Consensus 322 ~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G 401 (1433)
+.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++. .+.+|++++|+..++.+.+|++++|++|
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~~G 217 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMSHG 217 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999987543 3567777889999999999999999999
Q ss_pred eEEEecCHHHHH
Q 000540 402 QIVYQGPRELVL 413 (1433)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1433)
++++.|+.+++.
T Consensus 218 ~i~~~~~~~~~~ 229 (254)
T PRK10418 218 RIVEQGDVETLF 229 (254)
T ss_pred EEEEecCHHHHh
Confidence 999999998774
No 478
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=312.99 Aligned_cols=210 Identities=23% Similarity=0.350 Sum_probs=165.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|++|++||+++|+||||||||||+++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 112389999999987531 1245799999987777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ +||+||+.++....+.... .+.+..++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH-h
Confidence 6 8999999987543221000 001123455667777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.++++++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--K-DYTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 2 356777888888999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 479
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-32 Score=305.55 Aligned_cols=192 Identities=26% Similarity=0.384 Sum_probs=161.0
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCC-------ccceEEEecCCCCCCCCCC
Q 000540 170 DVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1433)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1433)
|+|+++++ ++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999988 999999998864311 1357999999988888899
Q ss_pred HHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 000540 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIR 322 (1433)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~ 322 (1433)
++||+.++.... .. .+....++.+++.+||++..++. ++
T Consensus 92 ~~~~l~~~~~~~---~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN---------------------------------REDRISVDELLDLLGLDHLLNRY-----PA 130 (214)
T ss_pred HHHHHHHHHhhC---CH---------------------------------HHHHHHHHHHHHHcCCHhHhhcC-----cc
Confidence 999998764211 00 00112356678899998665543 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 000540 323 GISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILLSNGQ 402 (1433)
Q Consensus 323 ~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL~~G~ 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++.. .++++++++|+..++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999987653 24667778899999999999999999999
Q ss_pred EEEec
Q 000540 403 IVYQG 407 (1433)
Q Consensus 403 iv~~G 407 (1433)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 480
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-33 Score=320.16 Aligned_cols=204 Identities=20% Similarity=0.339 Sum_probs=164.6
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C---CCCceeEEEECCeeCCCC-----CccceEEEecCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--S---SLKVSGRVTYNGHNMDEF-----VPERTAAYISQH 234 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~---~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 234 (1433)
..+|+|+|++|++|++++|+||||||||||+++|+|..+ | + +|+|.++|.++... ..++.++|++|+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~ 128 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQK 128 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCC
Confidence 359999999999999999999999999999999999854 3 5 89999999987532 124579999999
Q ss_pred CCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----c
Q 000540 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----V 310 (1433)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~ 310 (1433)
+.+++ .||+||+.++.+..+.... ...+..+..+++.+|+. +
T Consensus 129 ~~l~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~ 174 (286)
T PRK14275 129 PNPFP-KSIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSD 174 (286)
T ss_pred CCCCc-cCHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhh
Confidence 87776 4999999986543211000 00112345566777764 2
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 000540 311 CADTVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYN 390 (1433)
Q Consensus 311 ~~dt~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1433)
..+ ..+..|||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.. +.+|++++|+..++.+
T Consensus 175 ~~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~ 246 (286)
T PRK14275 175 RLD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASR 246 (286)
T ss_pred Hhh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHH
Confidence 223 34557999999999999999999999999999999999999999999998642 3577788999999999
Q ss_pred hcCeEEEEcCCeEEEecCHHHHH
Q 000540 391 LFDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 391 ~~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
++|++++|++|+++..|+++++.
T Consensus 247 ~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 247 VSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 481
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-32 Score=313.30 Aligned_cols=210 Identities=21% Similarity=0.315 Sum_probs=166.4
Q ss_pred eeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCCC
Q 000540 166 TILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1433)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1433)
.+|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5899999999999999999999999999999999998741 01389999999987531 1246799999988777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+. ||+||+.++....+.... ...+..++++++.+++.+...+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR---------------------------------RVLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999886543221000 001123455677777753211122 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + .++++++|+..++.+.+|+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 56777888989999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+++++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 482
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.25 Aligned_cols=211 Identities=19% Similarity=0.264 Sum_probs=166.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (251)
T PRK14249 17 HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNP 96 (251)
T ss_pred eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999998741 1259999999987532 124679999999877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ .||+||+.++....+.... ++....++.+++.+||.+......
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 141 (251)
T PRK14249 97 FP-KSIFDNVAFGPRMLGTTAQ---------------------------------SRLDEVVEKSLRQAALWDEVKDNL- 141 (251)
T ss_pred Cc-CcHHHHHhhHHHhcCCChh---------------------------------hHHHHHHHHHHHHhCCchhhhhHh-
Confidence 76 4999999987543221000 001122344566666643211111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
++.+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++ + . +.++++++|+..++.+.+|++++
T Consensus 142 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~-~~tilivsh~~~~~~~~~d~i~~ 218 (251)
T PRK14249 142 HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQEL-K-Q-NYTIAIVTHNMQQAARASDWTGF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-h-c-CCEEEEEeCCHHHHHhhCCEEEE
Confidence 2445679999999999999999999999999999999999999999999986 3 2 46777889999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 219 LLTGDLVEYGRTGEIF 234 (251)
T ss_pred EeCCeEEEeCCHHHHH
Confidence 9999999999998774
No 483
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-32 Score=310.51 Aligned_cols=194 Identities=19% Similarity=0.268 Sum_probs=163.8
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccccccceEEEeecCCCCCCCCCH
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQETFARISGYCEQNDIHSPFVTV 949 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 949 (1433)
..+.+|+|+|+++++||+++|+||||||||||+++|+|..++ ..|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 346799999999999999999999999999999999998653 4799999884 3566777767778999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000540 950 YESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1433)
Q Consensus 950 ~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgL 1029 (1433)
.||+.+..... ....+...+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754432 1233444556778888889987776653 569999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCCC
Q 000540 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPLG 1085 (1433)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~~ 1085 (1433)
|+.++..+++.|+++.+.|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999998777999999999986 56788999999986 6888888753
No 484
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-33 Score=314.09 Aligned_cols=211 Identities=24% Similarity=0.370 Sum_probs=164.3
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ ..|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 467888887653 123589999999999999999999999999999999998653 479999999765
Q ss_pred cc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000540 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLV-G-----LPGV 996 (1433)
Q Consensus 926 ~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~ 996 (1433)
.. ..+++.++|++|++.+++. |++||+.+... .... ..+.+.++.+++.+..+... | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NATD----EEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCCH----HHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999887765 99999976421 1111 12344455555543333221 0 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCc
Q 000540 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1433)
Q Consensus 997 ~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg 1076 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||++. ++ +.||++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6799999999999999999999999999999999999999999999986 5899999999986 34 56999999986 6
Q ss_pred EEEEECCC
Q 000540 1077 YEIYVGPL 1084 (1433)
Q Consensus 1077 ~~~y~G~~ 1084 (1433)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 77887764
No 485
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=314.08 Aligned_cols=210 Identities=20% Similarity=0.266 Sum_probs=168.6
Q ss_pred cceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCC
Q 000540 164 HLTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDN 236 (1433)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 236 (1433)
+..+|+|+|++++||++++|+||||||||||+++|+|.++|. ...+|+|+++|+++... ..++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 356999999999999999999999999999999999999761 01389999999987532 12456999999876
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
++ .+|++||+.++....+.. .+....++.+++.+||.+..+...
T Consensus 100 ~~-~~tv~enl~~~~~~~~~~-----------------------------------~~~~~~~~~~l~~~~l~~~i~~~~ 143 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNRYK-----------------------------------GDLGDRVKHALQGAALWDEVKDKL 143 (261)
T ss_pred cc-cccHHHHHHHHHhhcCch-----------------------------------HHHHHHHHHHHHHcCCchhhhhhh
Confidence 66 699999999875432100 001123566778888754332222
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
+ ...+.||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++. . ++++++++|+..++.+++|+|+
T Consensus 144 ~-~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~~~~d~v~ 219 (261)
T PRK14263 144 K-VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--K-DYTIALVTHNMQQAIRVADTTA 219 (261)
T ss_pred h-CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCCEEE
Confidence 2 3556799999999999999999999999999999999999999999999873 2 3677778899999999999999
Q ss_pred EEc--------CCeEEEecCHHHHH
Q 000540 397 LLS--------NGQIVYQGPRELVL 413 (1433)
Q Consensus 397 vL~--------~G~iv~~G~~~~~~ 413 (1433)
+|+ +|++++.|+++++.
T Consensus 220 ~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 220 FFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEecccccccCCceEEEeCCHHHHH
Confidence 995 89999999998764
No 486
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-32 Score=312.31 Aligned_cols=208 Identities=20% Similarity=0.269 Sum_probs=163.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEECCeeCCCCC-----ccceEEEecCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD-----SSLKVSGRVTYNGHNMDEFV-----PERTAAYISQH 234 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1433)
..+|+|+|+++++|++++|+||||||||||+++|+|..+ |+ +|+|.++|+++.... .++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 358999999999999999999999999999999999864 45 899999999875321 23579999999
Q ss_pred CCCCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 000540 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1433)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1433)
+.+++ .||+||+.++.+..+... + ...+..+...++.+++.+....
T Consensus 111 ~~~~~-~tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFP-KSIYNNITHALKYAGERR--K-------------------------------SVLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCc-ccHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCCcchHH
Confidence 87776 499999988643211000 0 0011223455677777421111
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 000540 315 VVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDD 394 (1433)
Q Consensus 315 ~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1433)
.. +..+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ + ++|++++|+..++.+++|+
T Consensus 157 ~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~ 232 (268)
T PRK14248 157 RL-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDR 232 (268)
T ss_pred HH-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCE
Confidence 11 234567999999999999999999999999999999999999999999998742 3 5677788888999999999
Q ss_pred EEEEcCCeEEEecCHHHHH
Q 000540 395 IILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 395 iivL~~G~iv~~G~~~~~~ 413 (1433)
|++|++|++++.|+.+++.
T Consensus 233 v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 233 TAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 487
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=4.5e-31 Score=340.16 Aligned_cols=123 Identities=24% Similarity=0.275 Sum_probs=100.2
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCeEE
Q 000540 946 FVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1021 (1433)
Q Consensus 946 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~aL~~---~p~iLl 1021 (1433)
.+||.|.+.|...+. .. ....++++.+||... .++. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467788877754331 11 123578888999753 3443 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe-----cCcEEEEECCC
Q 000540 1022 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGYEIYVGPL 1084 (1433)
Q Consensus 1022 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~-----~Gg~~~y~G~~ 1084 (1433)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999986 346799999994 57899999985
No 488
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.8e-32 Score=307.10 Aligned_cols=210 Identities=24% Similarity=0.287 Sum_probs=165.6
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEc--Cc-
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVS--GY- 923 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~- 923 (1433)
++++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ ..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 567888877642100 00124699999999999999999999999999999999998653 36999998 42
Q ss_pred -cCcc---cc----ccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000540 924 -PKKQ---ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-KQSLVGLP 994 (1433)
Q Consensus 924 -~~~~---~~----~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~ 994 (1433)
+... .. .++.++|++|++.+++.+||+|++.+..... ........+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3211 11 1346899999998999999999998764332 12233344567889999999753 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEe
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~ 1073 (1433)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.||+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 3579999999999999999999999999999999999999999999999777999999999965 4557899998763
No 489
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=311.44 Aligned_cols=208 Identities=23% Similarity=0.335 Sum_probs=165.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 359999999999999999999999999999999999987631 1379999999987531 123579999999888
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----cccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCAD 313 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1433)
++.+|+.||+.++....+...+ + +....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR-D--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 8889999999876532211000 0 0111233445555543 2233
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 000540 314 TVVGDEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFD 393 (1433)
Q Consensus 314 t~vG~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1433)
..++.||||||||++||++|+.+|++|+|||||+|||..+...+.+.|+++. . ++++++++|+..++.+.+|
T Consensus 144 -----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 -----TPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--K-VTTIIIVTHNMHQAARVSD 215 (252)
T ss_pred -----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCC
Confidence 3455799999999999999999999999999999999999999999999864 2 3677778899999999999
Q ss_pred eEEEEcCCeEEEecCHHHHH
Q 000540 394 DIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 394 ~iivL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 490
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=311.98 Aligned_cols=211 Identities=21% Similarity=0.322 Sum_probs=165.9
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCC-C---CccceEEEecCCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDE-F---VPERTAAYISQHDNHI 238 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 238 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+|. ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 45899999999999999999999999999999999998752 0138999999988742 1 1235799999998777
Q ss_pred CCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 000540 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGD 318 (1433)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~ 318 (1433)
+ .||+||+.++....+.... ......++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK---------------------------------KVLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 6 8999999886532211000 001123445666777653221111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 000540 319 EMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIILL 398 (1433)
Q Consensus 319 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iivL 398 (1433)
..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+..++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 67777888889999999999999
Q ss_pred cCCeEEEecCHHHHH
Q 000540 399 SNGQIVYQGPRELVL 413 (1433)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1433)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 218 LMGELVEHDDTQVIF 232 (249)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 491
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-32 Score=307.96 Aligned_cols=211 Identities=19% Similarity=0.289 Sum_probs=163.5
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|..+ |+...+|+|.++|.++... ..++.++|++|++..
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 358999999999999999999999999999999999865 3211389999999987431 123579999998877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ .||+||+.++.+..+.... + ..+..+...++.+++........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-A--------------------------------VLDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCccchhhHH-
Confidence 77 7999999986543221100 0 00112334555666532111111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++... + .++++++|+..++.+.+|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 234557999999999999999999999999999999999999999999998743 3 5677788999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|+++..|+..++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 220 FLTGNLIEFADTKQMF 235 (252)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 492
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1e-32 Score=298.47 Aligned_cols=159 Identities=25% Similarity=0.436 Sum_probs=141.3
Q ss_pred EeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCC---CCCCC
Q 000540 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQND---IHSPF 946 (1433)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~ 946 (1433)
+|+|+|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 79999999999999999999999999999999998653 479999999876431 2356799999984 57788
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000540 947 VTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1433)
Q Consensus 947 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPT 1026 (1433)
+|++||+.+... ||+|||||++||+||+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999976320 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecC
Q 000540 1027 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1433)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~G 1075 (1433)
+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++|
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 999999999999999999777899999999986 677889999999875
No 493
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-32 Score=317.18 Aligned_cols=221 Identities=23% Similarity=0.276 Sum_probs=173.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCC---ceEEEEEEEcC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNIKVSG 922 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1433)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+|||||||||++|+|.... .+..|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588899987763 24699999999999999999999999999999999997531 13579999999
Q ss_pred ccCcc-----ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-HHHHHHHHHHHHHHcCCcccc
Q 000540 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EID-SETRKMFIGEVMELVELKPLK 987 (1433)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 987 (1433)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... ....++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 123467999999988777 59999999864322100 011 122345678889999885322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcC
Q 000540 988 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1067 (1433)
Q Consensus 988 ~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D 1067 (1433)
+..... .+..||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.||
T Consensus 191 ~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLDD-NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhcC-ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 111111 2467999999999999999999999999999999999999999999999976 589999999987 5778899
Q ss_pred EEE-EEecCcEEEEECCC
Q 000540 1068 ELF-LMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1068 ~v~-~L~~Gg~~~y~G~~ 1084 (1433)
+++ +|++ |++++.|+.
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 974 6675 788998875
No 494
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.1e-32 Score=310.74 Aligned_cols=201 Identities=25% Similarity=0.387 Sum_probs=167.7
Q ss_pred eecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEECCeeCCCCCc---cceEEEecCCCCCCCCCCH
Q 000540 167 ILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTV 243 (1433)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 243 (1433)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999874 3 7999999998765432 2468999999878888999
Q ss_pred HHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccc
Q 000540 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVGDEMIRG 323 (1433)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG~~~~~~ 323 (1433)
+||+.+..... . .. .+....++++++.+||.+..++. ++.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRS-----VNQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCC-----ccc
Confidence 99998753210 0 00 00123456788999998766654 446
Q ss_pred CChhhhhHHHHHHHHhc-------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 000540 324 ISGGQRKRVTTGEMMVG-------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDII 396 (1433)
Q Consensus 324 LSGGqkqRvsia~aL~~-------~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1433)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++.. . +.++++++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999998753 3 5677888899999999999999
Q ss_pred EEcCCeEEEecCHHHHH
Q 000540 397 LLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 397 vL~~G~iv~~G~~~~~~ 413 (1433)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987763
No 495
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.3e-32 Score=343.34 Aligned_cols=215 Identities=22% Similarity=0.251 Sum_probs=174.0
Q ss_pred eeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcC----
Q 000540 847 LTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSG---- 922 (1433)
Q Consensus 847 i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g---- 922 (1433)
++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|.....+.+|+|.++|
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~ 67 (520)
T TIGR03269 1 IEVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCE 67 (520)
T ss_pred CEEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccc
Confidence 35677777652 3469999999999999999999999999999999999741013479998872
Q ss_pred -------------------ccCc----------c---ccccceEEEeecC-CCCCCCCCHHHHHHHHHHhcCCCCCCHHH
Q 000540 923 -------------------YPKK----------Q---ETFARISGYCEQN-DIHSPFVTVYESLLYSAWLRLPPEIDSET 969 (1433)
Q Consensus 923 -------------------~~~~----------~---~~~~~~~gyv~Q~-~~~~~~lTv~E~l~f~a~lr~~~~~~~~~ 969 (1433)
.++. . ...++.++|++|+ +.+++.+||+|++.+...... ....+
T Consensus 68 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~ 144 (520)
T TIGR03269 68 KCGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKE 144 (520)
T ss_pred cccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHH
Confidence 1110 0 1124568999997 677888999999988654321 23344
Q ss_pred HHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC
Q 000540 970 RKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TG 1048 (1433)
Q Consensus 970 ~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~-~g 1048 (1433)
.++++.++++.++|.+..++.+ ..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|
T Consensus 145 ~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g 219 (520)
T TIGR03269 145 AVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASG 219 (520)
T ss_pred HHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcC
Confidence 4567889999999988777654 56999999999999999999999999999999999999999999999965 48
Q ss_pred CEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC
Q 000540 1049 RTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL 1084 (1433)
Q Consensus 1049 ~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~ 1084 (1433)
+|||+++|++. .+.+.||++++|++ |++++.|+.
T Consensus 220 ~tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 253 (520)
T TIGR03269 220 ISMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTP 253 (520)
T ss_pred cEEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCH
Confidence 99999999986 46778999999997 678888875
No 496
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-32 Score=310.93 Aligned_cols=211 Identities=22% Similarity=0.294 Sum_probs=166.4
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEECCeeCCCC-----CccceEEEecCCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 35899999999999999999999999999999999987531 11379999999987543 123569999999877
Q ss_pred CCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 000540 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVVG 317 (1433)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vG 317 (1433)
++ .||+||+.|+.+..+.... .+.+..++.+++.+++.+...+..
T Consensus 99 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FP-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Cc-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-
Confidence 77 5999999987543221000 001123455667777643211111
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 000540 318 DEMIRGISGGQRKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPETYNLFDDIIL 397 (1433)
Q Consensus 318 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iiv 397 (1433)
+..++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + .++++++|+..++.+.+|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 234567999999999999999999999999999999999999999999998743 3 5777788999999999999999
Q ss_pred EcCCeEEEecCHHHHH
Q 000540 398 LSNGQIVYQGPRELVL 413 (1433)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1433)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999998764
No 497
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-32 Score=310.41 Aligned_cols=198 Identities=25% Similarity=0.324 Sum_probs=165.5
Q ss_pred eeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccC
Q 000540 846 SLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPK 925 (1433)
Q Consensus 846 ~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1433)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCc--
Confidence 377888887763 24699999999999999999999999999999999998653 4799999862
Q ss_pred ccccccceEEEeecCCCCCCC--CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000540 926 KQETFARISGYCEQNDIHSPF--VTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQ 1003 (1433)
Q Consensus 926 ~~~~~~~~~gyv~Q~~~~~~~--lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1433)
..++|++|++.+++. .|+.+++.+. .... ++.+.++++.+++.+..++.+ ..|||||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~~----~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGTK----KEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------cccc----HHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999877765 4778776431 1111 234678999999988777653 5699999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhcCEEEEEecCcEEEEEC
Q 000540 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVG 1082 (1433)
Q Consensus 1004 rqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G 1082 (1433)
|||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|+ + +++..|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999986 5778899999995 4 577888
Q ss_pred CC
Q 000540 1083 PL 1084 (1433)
Q Consensus 1083 ~~ 1084 (1433)
+.
T Consensus 203 ~~ 204 (251)
T PRK09544 203 TP 204 (251)
T ss_pred CH
Confidence 75
No 498
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-32 Score=325.30 Aligned_cols=217 Identities=26% Similarity=0.371 Sum_probs=184.4
Q ss_pred CceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCccCccc----cccceEEEeecCCCCCC
Q 000540 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYPKKQE----TFARISGYCEQNDIHSP 945 (1433)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~ 945 (1433)
+..++|+||||++++||++||+|.||||||||+|+|+|...+ .+|+|.++|.+.... ....-|+.|.|+..+.|
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p--~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPP--DSGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccC--CCceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 456899999999999999999999999999999999997663 489999999876432 23456899999999999
Q ss_pred CCCHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000540 946 FVTVYESLLYSAWLRL-PPEIDSETRKMFIGEVMELVELKPLKQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1433)
Q Consensus 946 ~lTv~E~l~f~a~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~aL~~~p~iLlLDE 1024 (1433)
++||.||+.++...+. ..-++.....+...++|+.+++....++.++ .||.||||.|.|||||..+++||+|||
T Consensus 97 ~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~LsiaqrQ~VeIArAl~~~arllIlDE 171 (500)
T COG1129 97 NLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLSIAQRQMVEIARALSFDARVLILDE 171 (500)
T ss_pred CccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 9999999987755443 2335667777788999999999644666654 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEecCcEEEEECCC-Cc-ccchHHHHH
Q 000540 1025 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGYEIYVGPL-GR-HSCHLVSYF 1095 (1433)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~Gg~~~y~G~~-~~-~~~~~~~yf 1095 (1433)
|||.|+....+.+.+.++++.++|.+||++||.+. ++++.|||+.||++ |+.+-.++. +. ...+++...
T Consensus 172 PTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~M 242 (500)
T COG1129 172 PTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRLM 242 (500)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHHh
Confidence 99999999999999999999999999999999997 89999999999997 677887773 42 224555544
No 499
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7.1e-33 Score=358.91 Aligned_cols=211 Identities=27% Similarity=0.391 Sum_probs=173.7
Q ss_pred ceeeEeceEeEeecccchhhccccCCceEEeeeeEEEEeCCcEEEEEccCCCChhHHHhhhcCCCCCceEEEEEEEcCcc
Q 000540 845 HSLTFDEVVYSVDMPQQMKLQGVSDDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIKVSGYP 924 (1433)
Q Consensus 845 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1433)
..++|+||+|+++.. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 369999999998531 124699999999999999999999999999999999998764 47999999998
Q ss_pred Ccc---ccccceEEEeecCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000540 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEIDSETRKMFIGEVMELVELKPL-------KQSLVGLP 994 (1433)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1433)
.++ ..+++.++||+|++.+++ -|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 653 346778999999998875 69999998742 1 222 3346778888887654 34555543
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhcCEEEEEec
Q 000540 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1433)
Q Consensus 995 ~~~~LSgGqrqRl~iA~aL~~~p~iLlLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~i~~~~D~v~~L~~ 1074 (1433)
..+||||||||++|||||+++|+||+||||||+||+++++.+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999998 22 235899999999985 5678999999986
Q ss_pred CcEEEEECCC
Q 000540 1075 GGYEIYVGPL 1084 (1433)
Q Consensus 1075 Gg~~~y~G~~ 1084 (1433)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 789999984
No 500
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-32 Score=313.28 Aligned_cols=213 Identities=28% Similarity=0.382 Sum_probs=170.0
Q ss_pred ceeecceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----CCceeEEEECCeeCCCCCc---cceEEEecCCCC
Q 000540 165 LTILKDVSGIIKPGRLTLLLGPPASGKTTLLLALAGKLDSS-----LKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN 236 (1433)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 35999999999999999999999999999999999999874 1127999999998764322 346899999876
Q ss_pred CCCCCCHHHHHHHhhHhcCCCchhhHhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 000540 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTVV 316 (1433)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1433)
.++.+||+||+.++...... .. ... ..+....++.+++.+||++..++
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~-------------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~-- 141 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RA-------------GAL---------------THRDGEIAWQALALAGATALVGR-- 141 (272)
T ss_pred CCCCCcHHHHHhhccccccc--cc-------------ccC---------------CHHHHHHHHHHHHHcCcHhhhcC--
Confidence 66779999999875311000 00 000 00112345678899999865554
Q ss_pred cccccccCChhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhH
Q 000540 317 GDEMIRGISGGQRKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINCGTAVISLLQPAPE 387 (1433)
Q Consensus 317 G~~~~~~LSGGqkqRvsia~aL~---------~~p~illLDEptsgLDs~t~~~i~~~l~~~~~~~~~t~vi~i~q~~~~ 387 (1433)
.+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+. .++++++++|+..+
T Consensus 142 ---~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tviiisH~~~~ 217 (272)
T PRK13547 142 ---DVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WNLGVLAIVHDPNL 217 (272)
T ss_pred ---CcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHH
Confidence 34579999999999999999 599999999999999999999999999987543 24667778888899
Q ss_pred HHhhcCeEEEEcCCeEEEecCHHHHH
Q 000540 388 TYNLFDDIILLSNGQIVYQGPRELVL 413 (1433)
Q Consensus 388 ~~~~~D~iivL~~G~iv~~G~~~~~~ 413 (1433)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999988763
Done!