Query 000541
Match_columns 1433
No_of_seqs 853 out of 6098
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 18:38:57 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000541.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000541hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 5E-258 1E-262 2378.6 97.3 1340 40-1433 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 4E-238 8E-243 2364.2 142.2 1404 30-1433 25-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 3E-188 6E-193 1892.4 134.5 1279 97-1428 2-1389(1394)
4 KOG0061 Transporter, ABC super 100.0 1.1E-95 2E-100 915.3 56.5 579 832-1432 22-611 (613)
5 PLN03211 ABC transporter G-25; 100.0 2.3E-94 5E-99 912.9 61.6 580 832-1430 36-659 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-94 3.5E-99 916.4 59.7 565 859-1433 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 1.5E-91 3.3E-96 949.2 62.3 561 859-1430 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 4.4E-90 9.5E-95 929.6 58.6 562 859-1429 176-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 7.1E-84 1.5E-88 809.8 39.8 563 859-1431 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 1.5E-79 3.3E-84 769.5 56.1 584 119-779 22-608 (613)
11 TIGR00955 3a01204 The Eye Pigm 100.0 2.5E-79 5.4E-84 777.5 58.6 569 166-778 35-612 (617)
12 PLN03211 ABC transporter G-25; 100.0 2E-78 4.3E-83 767.6 63.2 609 118-779 35-658 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 4.4E-71 9.5E-76 697.5 61.8 771 168-1073 365-1208(1228)
14 TIGR01257 rim_protein retinal- 100.0 3.7E-70 8.1E-75 734.4 69.6 224 835-1085 1937-2162(2272)
15 KOG0054 Multidrug resistance-a 100.0 4.6E-70 1E-74 705.3 54.7 766 169-1074 534-1358(1381)
16 PLN03130 ABC transporter C fam 100.0 8.3E-66 1.8E-70 704.7 58.1 211 834-1073 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 2.8E-65 6E-70 700.5 56.3 211 834-1073 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 6.1E-65 1.3E-69 604.9 50.8 474 169-1073 22-514 (539)
19 PRK13549 xylose transporter AT 100.0 8.6E-64 1.9E-68 624.8 48.7 460 169-1075 18-491 (506)
20 PTZ00265 multidrug resistance 100.0 7.4E-63 1.6E-67 669.6 61.4 217 834-1073 1164-1447(1466)
21 TIGR00957 MRP_assoc_pro multi 100.0 2.3E-63 5E-68 682.5 56.8 211 834-1073 1283-1503(1522)
22 PRK10762 D-ribose transporter 100.0 9.5E-64 2.1E-68 623.6 46.8 450 169-1075 17-481 (501)
23 PRK09700 D-allose transporter 100.0 8.5E-64 1.8E-68 625.8 46.4 458 169-1073 18-493 (510)
24 PRK10261 glutathione transport 100.0 5.9E-63 1.3E-67 628.5 53.3 487 169-1073 29-548 (623)
25 PRK15439 autoinducer 2 ABC tra 100.0 6E-63 1.3E-67 616.8 48.0 453 169-1074 24-488 (510)
26 TIGR03269 met_CoM_red_A2 methy 100.0 1.3E-62 2.8E-67 616.6 50.1 446 168-1073 12-512 (520)
27 PRK15134 microcin C ABC transp 100.0 1.9E-62 4.1E-67 615.9 48.8 464 169-1073 22-510 (529)
28 TIGR02633 xylG D-xylose ABC tr 100.0 2.4E-62 5.1E-67 611.8 48.4 461 168-1074 13-488 (500)
29 PRK11288 araG L-arabinose tran 100.0 3.2E-62 7E-67 609.8 47.9 451 169-1075 17-482 (501)
30 PTZ00243 ABC transporter; Prov 100.0 4.4E-61 9.5E-66 657.7 61.2 211 834-1073 1307-1528(1560)
31 TIGR01271 CFTR_protein cystic 100.0 9.5E-61 2.1E-65 654.6 58.8 210 834-1073 1216-1435(1490)
32 PRK10982 galactose/methyl gala 100.0 2.7E-61 5.8E-66 600.6 47.2 451 168-1074 10-476 (491)
33 PRK10938 putative molybdenum t 100.0 2.1E-60 4.6E-65 592.8 42.7 447 169-1070 16-484 (490)
34 PRK11819 putative ABC transpor 100.0 8.2E-58 1.8E-62 575.8 52.0 201 835-1072 324-527 (556)
35 COG4172 ABC-type uncharacteriz 100.0 2.4E-57 5.1E-62 505.4 45.4 471 167-1073 21-511 (534)
36 PRK15064 ABC transporter ATP-b 100.0 1.6E-57 3.6E-62 571.4 49.8 198 835-1073 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.2E-57 7E-62 570.5 52.1 201 835-1072 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 1.7E-55 3.6E-60 552.0 43.3 211 835-1087 340-554 (590)
39 PRK10636 putative ABC transpor 100.0 1.4E-54 3E-59 552.0 51.1 197 835-1073 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 2.8E-54 6E-59 550.8 50.0 201 835-1072 319-522 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.5E-54 3.3E-59 513.3 43.3 455 161-1070 13-482 (500)
42 PLN03073 ABC transporter F fam 100.0 1E-52 2.2E-57 535.3 42.1 200 835-1073 508-709 (718)
43 COG0488 Uup ATPase components 100.0 8.3E-52 1.8E-56 504.4 44.2 221 166-416 13-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 4.2E-50 9E-55 463.9 40.5 462 163-1074 11-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 9E-44 2E-48 371.6 20.7 227 162-439 8-238 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 7.1E-43 1.5E-47 364.8 22.4 214 836-1073 3-220 (240)
47 KOG0927 Predicted transporter 100.0 1.7E-41 3.8E-46 392.4 32.1 203 833-1073 387-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 1.3E-41 2.9E-46 392.5 24.6 224 835-1086 4-230 (293)
49 TIGR01257 rim_protein retinal- 100.0 1.6E-36 3.5E-41 410.1 71.8 216 834-1073 927-1144(2272)
50 COG1127 Ttg2A ABC-type transpo 100.0 6E-41 1.3E-45 355.7 21.8 231 835-1089 8-250 (263)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.4E-41 2E-45 366.4 23.3 218 835-1075 4-224 (254)
52 COG1135 AbcC ABC-type metal io 100.0 6.9E-41 1.5E-45 366.9 21.4 225 167-442 17-247 (339)
53 COG1120 FepC ABC-type cobalami 100.0 6.7E-41 1.5E-45 369.7 21.0 218 835-1074 2-224 (258)
54 COG1135 AbcC ABC-type metal io 100.0 7.4E-41 1.6E-45 366.7 20.9 219 836-1074 2-227 (339)
55 COG1125 OpuBA ABC-type proline 100.0 8.3E-41 1.8E-45 355.1 20.6 215 163-418 8-225 (309)
56 COG3839 MalK ABC-type sugar tr 100.0 1E-40 2.2E-45 381.9 21.9 217 171-438 18-235 (338)
57 COG3842 PotA ABC-type spermidi 100.0 9.2E-41 2E-45 384.2 19.6 227 164-440 13-240 (352)
58 COG1120 FepC ABC-type cobalami 100.0 2.1E-40 4.6E-45 365.7 21.4 211 168-417 14-227 (258)
59 COG1116 TauB ABC-type nitrate/ 100.0 3.3E-40 7.1E-45 356.5 21.8 204 835-1064 3-207 (248)
60 COG1118 CysA ABC-type sulfate/ 100.0 1.7E-40 3.6E-45 362.7 19.6 227 164-439 10-240 (345)
61 COG1131 CcmA ABC-type multidru 100.0 4.9E-40 1.1E-44 379.5 24.6 217 163-422 11-230 (293)
62 COG1136 SalX ABC-type antimicr 100.0 5.8E-40 1.2E-44 355.5 23.2 209 836-1066 2-219 (226)
63 COG1125 OpuBA ABC-type proline 100.0 3.2E-40 6.9E-45 350.6 18.9 213 836-1073 2-220 (309)
64 COG3638 ABC-type phosphate/pho 100.0 4E-40 8.6E-45 348.6 19.2 220 835-1075 3-234 (258)
65 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-39 2.4E-44 346.1 21.4 213 165-418 17-235 (263)
66 COG4555 NatA ABC-type Na+ tran 100.0 3.3E-40 7.2E-45 339.2 15.5 202 861-1074 15-218 (245)
67 COG2884 FtsE Predicted ATPase 100.0 1.5E-39 3.3E-44 331.9 19.8 213 836-1073 2-221 (223)
68 COG1116 TauB ABC-type nitrate/ 100.0 2.2E-39 4.7E-44 350.2 21.2 194 167-405 14-207 (248)
69 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 8.2E-39 1.8E-43 351.1 24.5 208 170-418 18-227 (254)
70 COG1118 CysA ABC-type sulfate/ 100.0 2.5E-39 5.4E-44 353.6 18.6 205 860-1074 14-223 (345)
71 COG3839 MalK ABC-type sugar tr 100.0 5.7E-39 1.2E-43 367.5 21.9 215 835-1074 3-219 (338)
72 COG3638 ABC-type phosphate/pho 100.0 5.3E-39 1.1E-43 340.1 19.4 217 167-418 15-237 (258)
73 COG4555 NatA ABC-type Na+ tran 100.0 4.8E-39 1E-43 330.6 17.1 207 168-418 14-222 (245)
74 PRK13537 nodulation ABC transp 100.0 3.1E-38 6.7E-43 368.1 25.9 214 835-1073 7-222 (306)
75 COG1117 PstB ABC-type phosphat 100.0 5.6E-39 1.2E-43 333.5 17.1 223 167-437 18-248 (253)
76 COG1136 SalX ABC-type antimicr 100.0 3.6E-38 7.7E-43 341.6 22.7 195 169-407 18-220 (226)
77 COG3842 PotA ABC-type spermidi 100.0 1.3E-38 2.8E-43 366.5 19.9 217 834-1074 4-222 (352)
78 COG1117 PstB ABC-type phosphat 100.0 4.2E-38 9E-43 327.0 18.5 218 834-1073 6-232 (253)
79 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-37 2.6E-42 368.9 25.0 207 168-417 16-223 (356)
80 TIGR02314 ABC_MetN D-methionin 100.0 1.6E-37 3.4E-42 364.9 25.5 217 836-1073 2-225 (343)
81 TIGR03258 PhnT 2-aminoethylpho 100.0 1.4E-37 3E-42 368.4 25.0 208 169-418 18-228 (362)
82 cd03261 ABC_Org_Solvent_Resist 100.0 1.6E-37 3.5E-42 350.4 24.3 214 836-1073 1-221 (235)
83 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-37 3.2E-42 367.8 25.0 207 169-418 17-224 (353)
84 PRK11432 fbpC ferric transport 100.0 1.5E-37 3.3E-42 367.0 24.9 206 169-417 19-225 (351)
85 TIGR02314 ABC_MetN D-methionin 100.0 3.5E-37 7.7E-42 361.9 27.8 206 169-417 18-229 (343)
86 PRK11650 ugpC glycerol-3-phosp 100.0 2.1E-37 4.6E-42 366.8 24.7 216 835-1074 3-220 (356)
87 TIGR03265 PhnT2 putative 2-ami 100.0 2.3E-37 4.9E-42 366.2 24.8 214 835-1073 4-219 (353)
88 PRK13536 nodulation factor exp 100.0 3.9E-37 8.5E-42 362.3 25.7 215 834-1073 40-256 (340)
89 TIGR01186 proV glycine betaine 100.0 4.7E-37 1E-41 362.6 26.2 209 167-418 4-219 (363)
90 PRK09452 potA putrescine/sperm 100.0 3.5E-37 7.5E-42 366.2 25.0 218 169-437 27-245 (375)
91 PRK13537 nodulation ABC transp 100.0 3.9E-37 8.4E-42 358.9 24.7 207 168-418 19-227 (306)
92 PRK11432 fbpC ferric transport 100.0 4.2E-37 9.1E-42 363.2 25.2 215 835-1074 6-222 (351)
93 cd03259 ABC_Carb_Solutes_like 100.0 5.5E-37 1.2E-41 340.8 23.6 210 837-1071 2-213 (213)
94 COG0411 LivG ABC-type branched 100.0 1.8E-37 4E-42 331.9 18.8 227 161-418 9-239 (250)
95 COG1122 CbiO ABC-type cobalt t 100.0 3.1E-37 6.6E-42 341.5 21.3 207 169-418 17-228 (235)
96 TIGR03258 PhnT 2-aminoethylpho 100.0 6E-37 1.3E-41 362.9 25.3 214 835-1073 5-223 (362)
97 COG1137 YhbG ABC-type (unclass 100.0 7.3E-38 1.6E-42 321.6 14.2 206 859-1074 15-224 (243)
98 COG3840 ThiQ ABC-type thiamine 100.0 2.2E-37 4.8E-42 313.0 17.4 196 866-1073 17-214 (231)
99 cd03269 ABC_putative_ATPase Th 100.0 8.7E-37 1.9E-41 338.5 23.7 209 837-1071 2-210 (210)
100 TIGR00960 3a0501s02 Type II (G 100.0 6.7E-37 1.4E-41 340.9 22.7 208 836-1066 2-215 (216)
101 COG3840 ThiQ ABC-type thiamine 100.0 4.5E-37 9.7E-42 310.8 19.1 201 174-417 17-218 (231)
102 COG1122 CbiO ABC-type cobalt t 100.0 4.3E-37 9.4E-42 340.3 20.7 214 836-1073 4-223 (235)
103 COG0410 LivF ABC-type branched 100.0 6.6E-37 1.4E-41 325.2 21.0 210 165-418 12-226 (237)
104 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.5E-36 3.3E-41 338.9 24.9 215 837-1073 2-218 (220)
105 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-36 2.7E-41 355.2 25.2 214 835-1073 4-219 (303)
106 PRK10851 sulfate/thiosulfate t 100.0 1.1E-36 2.4E-41 360.2 25.1 216 836-1073 3-221 (353)
107 TIGR01188 drrA daunorubicin re 100.0 6.9E-37 1.5E-41 357.2 23.0 202 860-1073 5-208 (302)
108 PRK10851 sulfate/thiosulfate t 100.0 1.2E-36 2.5E-41 360.1 24.9 210 169-417 15-225 (353)
109 COG2884 FtsE Predicted ATPase 100.0 7.6E-37 1.6E-41 312.2 19.7 204 165-412 11-220 (223)
110 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-36 3.3E-41 337.3 24.0 211 836-1071 1-213 (213)
111 KOG0058 Peptide exporter, ABC 100.0 4E-37 8.7E-42 370.9 20.8 210 167-418 479-691 (716)
112 cd03261 ABC_Org_Solvent_Resist 100.0 1.6E-36 3.6E-41 342.2 24.5 207 169-417 13-225 (235)
113 PRK09452 potA putrescine/sperm 100.0 1.6E-36 3.6E-41 360.4 25.6 214 835-1073 14-229 (375)
114 PRK11607 potG putrescine trans 100.0 1.5E-36 3.2E-41 361.5 25.2 206 169-417 32-238 (377)
115 cd03265 ABC_DrrA DrrA is the A 100.0 1.7E-36 3.6E-41 338.6 24.1 213 836-1073 1-216 (220)
116 cd03219 ABC_Mj1267_LivG_branch 100.0 1.9E-36 4E-41 342.1 24.6 215 837-1073 2-227 (236)
117 TIGR01188 drrA daunorubicin re 100.0 1.5E-36 3.3E-41 354.3 24.5 207 168-418 5-213 (302)
118 cd03234 ABCG_White The White s 100.0 3E-36 6.6E-41 337.9 25.3 221 836-1071 4-226 (226)
119 PRK11153 metN DL-methionine tr 100.0 2.2E-36 4.7E-41 357.9 25.2 217 836-1073 2-225 (343)
120 cd03218 ABC_YhbG The ABC trans 100.0 2.4E-36 5.2E-41 340.3 24.3 213 836-1073 1-217 (232)
121 PRK11000 maltose/maltodextrin 100.0 2.3E-36 5E-41 360.4 25.2 206 169-417 16-222 (369)
122 cd03266 ABC_NatA_sodium_export 100.0 2.1E-36 4.5E-41 337.5 23.2 215 836-1071 2-218 (218)
123 cd03296 ABC_CysA_sulfate_impor 100.0 3.6E-36 7.8E-41 340.2 25.3 217 835-1073 2-221 (239)
124 COG1124 DppF ABC-type dipeptid 100.0 1.6E-36 3.4E-41 324.3 20.9 217 835-1074 3-227 (252)
125 COG1124 DppF ABC-type dipeptid 100.0 2.3E-36 4.9E-41 323.1 22.1 205 170-418 21-231 (252)
126 PRK11607 potG putrescine trans 100.0 3.7E-36 8.1E-41 358.1 26.4 214 835-1073 19-234 (377)
127 PRK11000 maltose/maltodextrin 100.0 2.8E-36 6E-41 359.8 25.3 214 835-1073 3-218 (369)
128 PRK09536 btuD corrinoid ABC tr 100.0 2.4E-36 5.1E-41 360.8 24.5 218 835-1074 3-224 (402)
129 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-36 4.4E-41 335.0 22.1 207 836-1071 1-208 (208)
130 TIGR03522 GldA_ABC_ATP gliding 100.0 3.3E-36 7.1E-41 351.1 24.9 212 836-1073 3-216 (301)
131 PRK13536 nodulation factor exp 100.0 3.4E-36 7.3E-41 354.4 25.1 207 168-418 53-261 (340)
132 cd03260 ABC_PstB_phosphate_tra 100.0 2.8E-36 6.2E-41 338.5 22.7 214 836-1073 1-224 (227)
133 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.7E-36 5.8E-41 336.6 22.3 209 836-1066 1-217 (218)
134 cd03256 ABC_PhnC_transporter A 100.0 3.4E-36 7.3E-41 341.1 23.0 216 837-1073 2-229 (241)
135 cd03258 ABC_MetN_methionine_tr 100.0 4.2E-36 9.1E-41 338.5 23.7 217 836-1073 2-225 (233)
136 PRK11629 lolD lipoprotein tran 100.0 8.6E-36 1.9E-40 335.8 26.2 217 835-1073 5-229 (233)
137 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-36 5E-41 333.7 20.3 192 861-1068 13-205 (205)
138 PRK09493 glnQ glutamine ABC tr 100.0 7.3E-36 1.6E-40 338.0 24.8 214 836-1073 2-220 (240)
139 TIGR01186 proV glycine betaine 100.0 4.3E-36 9.4E-41 354.4 23.8 202 860-1073 5-214 (363)
140 COG2274 SunT ABC-type bacterio 100.0 3.4E-36 7.3E-41 378.9 23.9 207 170-418 487-696 (709)
141 cd03259 ABC_Carb_Solutes_like 100.0 5.8E-36 1.3E-40 332.6 23.1 200 169-411 13-213 (213)
142 COG4559 ABC-type hemin transpo 100.0 2.7E-36 6E-41 312.7 18.9 214 836-1074 2-226 (259)
143 cd03263 ABC_subfamily_A The AB 100.0 6.4E-36 1.4E-40 334.0 23.2 214 836-1073 1-216 (220)
144 TIGR02673 FtsE cell division A 100.0 6.2E-36 1.4E-40 332.6 22.9 206 836-1064 2-213 (214)
145 PRK11264 putative amino-acid A 100.0 9.8E-36 2.1E-40 339.1 25.1 214 836-1073 4-228 (250)
146 cd03265 ABC_DrrA DrrA is the A 100.0 7.8E-36 1.7E-40 333.2 23.6 206 168-416 12-219 (220)
147 PRK11153 metN DL-methionine tr 100.0 9.3E-36 2E-40 352.5 25.4 206 169-417 18-229 (343)
148 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.8E-36 1.7E-40 338.1 23.7 213 837-1073 2-220 (242)
149 cd03224 ABC_TM1139_LivF_branch 100.0 6.9E-36 1.5E-40 334.3 22.6 211 836-1073 1-216 (222)
150 PRK13637 cbiO cobalt transport 100.0 9.2E-36 2E-40 345.0 24.4 218 836-1073 3-229 (287)
151 TIGR02315 ABC_phnC phosphonate 100.0 5.2E-36 1.1E-40 339.9 21.8 217 836-1073 2-230 (243)
152 PRK11248 tauB taurine transpor 100.0 1.4E-35 3E-40 337.8 25.2 212 836-1073 2-215 (255)
153 PRK13637 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 343.1 25.9 218 169-429 20-248 (287)
154 TIGR01288 nodI ATP-binding ABC 100.0 1.1E-35 2.3E-40 347.4 24.7 206 169-418 17-224 (303)
155 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.4E-35 3.1E-40 340.6 25.2 211 164-417 32-249 (269)
156 cd03292 ABC_FtsE_transporter F 100.0 8.9E-36 1.9E-40 331.4 22.5 206 837-1066 2-213 (214)
157 KOG0062 ATPase component of AB 100.0 1.2E-35 2.6E-40 342.5 24.1 205 832-1072 359-563 (582)
158 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8E-36 1.7E-40 342.7 22.8 203 859-1073 35-245 (269)
159 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-35 2.7E-40 335.4 24.0 215 169-417 13-231 (236)
160 COG2274 SunT ABC-type bacterio 100.0 2.7E-34 5.9E-39 361.7 38.4 216 830-1073 466-691 (709)
161 PRK11831 putative ABC transpor 100.0 1.7E-35 3.7E-40 340.1 25.3 215 835-1073 7-228 (269)
162 COG4559 ABC-type hemin transpo 100.0 6E-36 1.3E-40 310.1 19.2 207 169-417 14-229 (259)
163 PRK13643 cbiO cobalt transport 100.0 3E-35 6.5E-40 340.9 27.5 224 170-437 20-255 (288)
164 PRK13647 cbiO cobalt transport 100.0 1.3E-35 2.9E-40 341.6 24.1 215 835-1073 4-222 (274)
165 COG1137 YhbG ABC-type (unclass 100.0 1.2E-36 2.7E-41 312.5 13.8 214 163-418 11-228 (243)
166 cd03264 ABC_drug_resistance_li 100.0 1.2E-35 2.6E-40 329.5 22.7 209 836-1071 1-211 (211)
167 COG0410 LivF ABC-type branched 100.0 7.7E-36 1.7E-40 317.1 20.0 213 836-1074 4-222 (237)
168 cd03296 ABC_CysA_sulfate_impor 100.0 1.7E-35 3.7E-40 334.7 23.9 210 169-417 15-225 (239)
169 cd03218 ABC_YhbG The ABC trans 100.0 1.8E-35 3.9E-40 333.1 24.0 206 168-417 12-221 (232)
170 PRK10895 lipopolysaccharide AB 100.0 1.6E-35 3.4E-40 335.4 23.6 214 836-1073 4-221 (241)
171 cd03258 ABC_MetN_methionine_tr 100.0 2.1E-35 4.5E-40 332.8 24.4 205 170-417 19-229 (233)
172 KOG0058 Peptide exporter, ABC 100.0 1.9E-36 4.1E-41 365.0 16.8 215 834-1073 464-686 (716)
173 PRK13634 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 343.9 23.6 218 836-1073 3-230 (290)
174 cd03262 ABC_HisP_GlnQ_permease 100.0 1.3E-35 2.8E-40 329.9 22.2 206 837-1066 2-212 (213)
175 COG4152 ABC-type uncharacteriz 100.0 6.8E-36 1.5E-40 315.6 18.8 212 836-1073 3-214 (300)
176 PRK10908 cell division protein 100.0 2.1E-35 4.6E-40 330.2 24.0 209 836-1068 2-216 (222)
177 cd03257 ABC_NikE_OppD_transpor 100.0 1.9E-35 4.2E-40 332.1 23.7 217 836-1071 2-228 (228)
178 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-35 3.9E-40 344.9 24.2 206 168-418 14-221 (301)
179 TIGR00960 3a0501s02 Type II (G 100.0 2.3E-35 4.9E-40 328.6 23.8 195 169-407 16-216 (216)
180 PRK13643 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 342.2 24.4 218 836-1073 2-228 (288)
181 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-35 5.1E-40 327.8 23.8 200 169-411 13-213 (213)
182 PRK10619 histidine/lysine/argi 100.0 3.1E-35 6.7E-40 336.2 25.3 214 835-1073 5-236 (257)
183 KOG0057 Mitochondrial Fe/S clu 100.0 1.3E-35 2.9E-40 345.6 22.4 228 115-418 344-574 (591)
184 PRK13651 cobalt transporter AT 100.0 2.2E-35 4.7E-40 343.5 24.1 218 836-1073 3-249 (305)
185 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.5E-35 7.5E-40 331.5 25.1 212 836-1073 2-216 (236)
186 TIGR00972 3a0107s01c2 phosphat 100.0 3.4E-35 7.4E-40 333.9 25.0 214 836-1073 2-227 (247)
187 PRK13636 cbiO cobalt transport 100.0 2.5E-35 5.5E-40 340.9 24.3 215 835-1073 5-226 (283)
188 COG0411 LivG ABC-type branched 100.0 9.3E-36 2E-40 318.8 19.0 207 859-1074 15-235 (250)
189 cd03235 ABC_Metallic_Cations A 100.0 1.3E-35 2.9E-40 329.7 21.2 199 861-1071 12-213 (213)
190 TIGR03740 galliderm_ABC gallid 100.0 2.8E-35 6E-40 329.5 23.8 208 837-1074 2-209 (223)
191 PRK13651 cobalt transporter AT 100.0 3.6E-35 7.7E-40 341.7 25.6 205 169-417 20-253 (305)
192 PRK13631 cbiO cobalt transport 100.0 2.5E-35 5.5E-40 344.9 24.3 218 835-1073 21-260 (320)
193 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.1E-35 6.7E-40 328.4 24.0 200 169-413 17-218 (220)
194 PRK13634 cbiO cobalt transport 100.0 2.9E-35 6.3E-40 341.3 24.4 218 169-429 20-249 (290)
195 TIGR02211 LolD_lipo_ex lipopro 100.0 3.7E-35 8.1E-40 328.1 24.4 211 836-1068 2-220 (221)
196 cd03224 ABC_TM1139_LivF_branch 100.0 2.8E-35 6.1E-40 329.4 23.4 203 169-417 13-220 (222)
197 cd03263 ABC_subfamily_A The AB 100.0 2.3E-35 5E-40 329.5 22.7 203 169-416 15-219 (220)
198 PRK11247 ssuB aliphatic sulfon 100.0 2.7E-35 5.9E-40 334.9 23.5 206 835-1073 12-218 (257)
199 PRK13650 cbiO cobalt transport 100.0 6.6E-35 1.4E-39 336.7 26.9 216 169-428 20-242 (279)
200 PRK11614 livF leucine/isoleuci 100.0 2.7E-35 5.8E-40 332.7 22.9 212 835-1073 5-221 (237)
201 cd03269 ABC_putative_ATPase Th 100.0 2.7E-35 5.9E-40 326.5 22.5 198 169-411 13-210 (210)
202 PRK11300 livG leucine/isoleuci 100.0 3.8E-35 8.3E-40 335.3 24.3 218 835-1074 5-239 (255)
203 cd03260 ABC_PstB_phosphate_tra 100.0 2E-35 4.4E-40 331.5 21.6 204 169-415 13-226 (227)
204 cd03225 ABC_cobalt_CbiO_domain 100.0 2.1E-35 4.5E-40 327.7 21.2 193 861-1064 14-210 (211)
205 PRK13646 cbiO cobalt transport 100.0 3.2E-35 7E-40 340.5 23.7 218 835-1073 2-230 (286)
206 cd03256 ABC_PhnC_transporter A 100.0 3.9E-35 8.3E-40 332.5 23.8 214 169-417 14-233 (241)
207 PRK10070 glycine betaine trans 100.0 5.4E-35 1.2E-39 348.8 26.0 208 167-417 39-253 (400)
208 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.2E-35 1.1E-39 331.4 24.5 206 169-417 14-224 (242)
209 PRK13647 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 336.3 25.1 204 169-416 18-225 (274)
210 PRK13650 cbiO cobalt transport 100.0 4.3E-35 9.2E-40 338.3 24.1 216 835-1073 4-224 (279)
211 TIGR03005 ectoine_ehuA ectoine 100.0 4.8E-35 1E-39 333.7 24.2 214 836-1073 1-231 (252)
212 PRK13631 cbiO cobalt transport 100.0 7.8E-35 1.7E-39 340.8 26.5 218 169-430 39-280 (320)
213 cd03233 ABC_PDR_domain1 The pl 100.0 5.5E-35 1.2E-39 321.5 23.6 196 835-1071 3-202 (202)
214 TIGR03415 ABC_choXWV_ATP choli 100.0 6E-35 1.3E-39 346.0 25.6 211 164-417 32-253 (382)
215 PRK13644 cbiO cobalt transport 100.0 5E-35 1.1E-39 336.8 24.1 213 836-1073 2-219 (274)
216 PRK11124 artP arginine transpo 100.0 5.5E-35 1.2E-39 331.2 24.1 213 836-1073 3-225 (242)
217 PRK13641 cbiO cobalt transport 100.0 4.7E-35 1E-39 339.3 24.1 219 835-1073 2-229 (287)
218 PRK14247 phosphate ABC transpo 100.0 8.3E-35 1.8E-39 331.4 25.7 217 835-1073 3-229 (250)
219 TIGR01978 sufC FeS assembly AT 100.0 6.3E-35 1.4E-39 331.1 24.6 219 836-1073 1-229 (243)
220 PRK14267 phosphate ABC transpo 100.0 7.9E-35 1.7E-39 332.2 25.2 220 835-1073 4-232 (253)
221 PRK13652 cbiO cobalt transport 100.0 6.4E-35 1.4E-39 336.7 24.5 214 836-1073 4-222 (277)
222 PRK14273 phosphate ABC transpo 100.0 8.2E-35 1.8E-39 332.2 25.1 215 835-1073 7-233 (254)
223 PRK15079 oligopeptide ABC tran 100.0 8.8E-35 1.9E-39 341.6 26.0 229 835-1073 8-246 (331)
224 PRK09536 btuD corrinoid ABC tr 100.0 4.8E-35 1E-39 349.5 24.1 210 168-417 15-227 (402)
225 TIGR03411 urea_trans_UrtD urea 100.0 7.4E-35 1.6E-39 330.2 24.5 215 836-1073 3-226 (242)
226 cd03268 ABC_BcrA_bacitracin_re 100.0 4.2E-35 9.1E-40 324.5 21.9 195 169-411 13-208 (208)
227 PRK11831 putative ABC transpor 100.0 7.6E-35 1.6E-39 334.8 24.8 207 169-417 20-232 (269)
228 PRK13548 hmuV hemin importer A 100.0 7.4E-35 1.6E-39 332.8 24.4 213 836-1073 3-225 (258)
229 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4E-35 8.7E-40 327.1 21.7 195 169-407 17-218 (218)
230 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.5E-35 1.2E-39 324.3 22.5 208 837-1071 2-211 (211)
231 cd03226 ABC_cobalt_CbiO_domain 100.0 4E-35 8.6E-40 323.9 21.3 192 169-408 13-205 (205)
232 PRK14268 phosphate ABC transpo 100.0 9.8E-35 2.1E-39 332.1 25.2 214 835-1073 12-237 (258)
233 COG4988 CydD ABC-type transpor 100.0 5.1E-35 1.1E-39 347.3 23.4 207 169-418 334-543 (559)
234 PRK13635 cbiO cobalt transport 100.0 7E-35 1.5E-39 336.3 24.1 215 835-1073 5-224 (279)
235 COG4175 ProV ABC-type proline/ 100.0 2.2E-35 4.7E-40 322.2 18.6 224 167-441 39-269 (386)
236 PRK13646 cbiO cobalt transport 100.0 9.6E-35 2.1E-39 336.5 24.8 206 169-417 20-234 (286)
237 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-34 2.5E-39 327.3 24.8 206 169-418 14-221 (236)
238 cd03232 ABC_PDR_domain2 The pl 100.0 7.9E-35 1.7E-39 317.8 22.6 190 835-1071 3-192 (192)
239 PRK11231 fecE iron-dicitrate t 100.0 8.3E-35 1.8E-39 332.2 23.6 217 836-1074 3-223 (255)
240 TIGR02315 ABC_phnC phosphonate 100.0 6.3E-35 1.4E-39 331.1 22.2 213 169-416 15-233 (243)
241 cd03266 ABC_NatA_sodium_export 100.0 6.7E-35 1.4E-39 325.3 22.0 198 170-411 19-218 (218)
242 PRK13638 cbiO cobalt transport 100.0 8.9E-35 1.9E-39 334.7 23.8 213 836-1073 2-220 (271)
243 PRK13635 cbiO cobalt transport 100.0 2E-34 4.3E-39 332.5 26.7 216 169-428 20-242 (279)
244 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-34 2.4E-39 328.3 24.2 205 169-417 14-224 (240)
245 PRK10575 iron-hydroxamate tran 100.0 1.1E-34 2.3E-39 333.0 24.1 217 835-1073 11-232 (265)
246 PRK11264 putative amino-acid A 100.0 1.1E-34 2.3E-39 330.6 24.0 205 169-417 16-232 (250)
247 PRK10070 glycine betaine trans 100.0 8.7E-35 1.9E-39 347.1 24.2 202 860-1073 40-249 (400)
248 PRK09984 phosphonate/organopho 100.0 1.1E-34 2.4E-39 332.6 24.0 220 835-1074 4-238 (262)
249 PRK14242 phosphate transporter 100.0 1.8E-34 3.8E-39 329.3 25.7 220 834-1073 5-232 (253)
250 PRK10253 iron-enterobactin tra 100.0 1E-34 2.2E-39 333.2 23.7 219 834-1074 6-229 (265)
251 PRK14241 phosphate transporter 100.0 1.6E-34 3.5E-39 330.4 25.2 217 835-1073 4-237 (258)
252 TIGR02769 nickel_nikE nickel i 100.0 1.5E-34 3.2E-39 331.8 25.0 223 836-1073 3-235 (265)
253 TIGR03410 urea_trans_UrtE urea 100.0 9.3E-35 2E-39 326.9 22.4 211 836-1074 1-217 (230)
254 PRK10584 putative ABC transpor 100.0 2.2E-34 4.7E-39 323.4 25.3 213 835-1069 6-226 (228)
255 PRK09473 oppD oligopeptide tra 100.0 3.1E-34 6.7E-39 337.2 27.6 214 169-418 29-251 (330)
256 PRK11629 lolD lipoprotein tran 100.0 1.7E-34 3.7E-39 325.2 24.5 201 169-413 22-229 (233)
257 PRK14245 phosphate ABC transpo 100.0 2E-34 4.4E-39 328.2 25.2 219 835-1073 3-229 (250)
258 cd03264 ABC_drug_resistance_li 100.0 8.8E-35 1.9E-39 322.6 21.5 197 169-411 13-211 (211)
259 cd03267 ABC_NatA_like Similar 100.0 2.4E-34 5.2E-39 324.4 25.4 204 165-411 30-236 (236)
260 PRK15079 oligopeptide ABC tran 100.0 1.9E-34 4E-39 338.8 25.3 209 168-417 33-250 (331)
261 TIGR01277 thiQ thiamine ABC tr 100.0 1.6E-34 3.4E-39 321.0 23.2 209 837-1072 2-212 (213)
262 PRK11174 cysteine/glutathione 100.0 1.4E-34 3.1E-39 369.3 26.2 207 169-418 363-572 (588)
263 PRK13639 cbiO cobalt transport 100.0 1.7E-34 3.6E-39 332.9 24.2 214 836-1073 2-221 (275)
264 cd03300 ABC_PotA_N PotA is an 100.0 2.1E-34 4.6E-39 324.1 24.5 212 837-1073 2-215 (232)
265 PRK13649 cbiO cobalt transport 100.0 1.6E-34 3.5E-39 334.3 24.2 218 836-1073 3-229 (280)
266 PRK10744 pstB phosphate transp 100.0 2.2E-34 4.8E-39 329.5 24.9 218 832-1073 10-239 (260)
267 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-34 3.3E-39 330.2 23.5 217 836-1074 2-222 (256)
268 TIGR01184 ntrCD nitrate transp 100.0 1.1E-34 2.4E-39 325.8 21.8 198 864-1073 1-199 (230)
269 PRK14235 phosphate transporter 100.0 2.7E-34 5.9E-39 329.8 24.9 220 835-1073 19-246 (267)
270 PRK10895 lipopolysaccharide AB 100.0 2E-34 4.3E-39 326.5 23.5 206 169-417 16-225 (241)
271 PRK13632 cbiO cobalt transport 100.0 2.3E-34 5E-39 331.2 24.3 215 835-1073 7-226 (271)
272 COG4181 Predicted ABC-type tra 100.0 9.8E-35 2.1E-39 290.6 18.1 212 835-1068 6-225 (228)
273 cd03213 ABCG_EPDR ABCG transpo 100.0 2.6E-34 5.6E-39 314.1 23.2 190 835-1071 3-194 (194)
274 PRK00349 uvrA excinuclease ABC 100.0 4.5E-33 9.7E-38 359.3 38.5 123 935-1073 791-922 (943)
275 PRK13636 cbiO cobalt transport 100.0 2.7E-34 5.8E-39 332.4 24.5 207 169-418 19-231 (283)
276 PRK14269 phosphate ABC transpo 100.0 2.7E-34 6E-39 326.2 24.2 219 836-1073 3-225 (246)
277 PRK00635 excinuclease ABC subu 100.0 8E-33 1.7E-37 368.9 41.9 134 932-1073 759-901 (1809)
278 PRK14256 phosphate ABC transpo 100.0 6E-34 1.3E-38 324.7 26.9 219 835-1073 4-231 (252)
279 PRK13632 cbiO cobalt transport 100.0 4.8E-34 1E-38 328.5 26.4 205 169-417 22-230 (271)
280 PRK11248 tauB taurine transpor 100.0 2.6E-34 5.7E-39 327.4 23.9 201 169-414 14-216 (255)
281 PRK13547 hmuV hemin importer A 100.0 2.2E-34 4.7E-39 330.2 23.4 219 836-1074 2-240 (272)
282 PRK13648 cbiO cobalt transport 100.0 2.7E-34 5.9E-39 330.3 24.2 216 835-1074 7-227 (269)
283 PRK14237 phosphate transporter 100.0 4.6E-34 1E-38 327.9 26.0 224 830-1073 15-246 (267)
284 PRK11144 modC molybdate transp 100.0 2E-34 4.4E-39 342.3 23.8 195 174-417 16-217 (352)
285 TIGR00968 3a0106s01 sulfate AB 100.0 3.1E-34 6.6E-39 323.8 24.1 212 837-1073 2-215 (237)
286 PRK11022 dppD dipeptide transp 100.0 4.5E-34 9.8E-39 335.5 26.4 224 835-1073 3-238 (326)
287 TIGR03410 urea_trans_UrtE urea 100.0 2.2E-34 4.8E-39 323.8 22.8 202 169-416 13-219 (230)
288 PRK13549 xylose transporter AT 100.0 2.1E-34 4.5E-39 360.4 25.0 221 835-1075 5-229 (506)
289 PRK11614 livF leucine/isoleuci 100.0 2.1E-34 4.5E-39 325.5 22.6 203 169-417 18-225 (237)
290 PRK09473 oppD oligopeptide tra 100.0 4E-34 8.6E-39 336.2 25.7 224 835-1073 12-246 (330)
291 PRK13633 cobalt transporter AT 100.0 2.3E-34 4.9E-39 332.6 23.3 219 835-1073 4-228 (280)
292 PRK13633 cobalt transporter AT 100.0 4.4E-34 9.5E-39 330.2 25.6 205 169-417 23-232 (280)
293 PRK14250 phosphate ABC transpo 100.0 2.2E-34 4.9E-39 325.8 22.6 209 835-1073 3-216 (241)
294 cd03292 ABC_FtsE_transporter F 100.0 2.1E-34 4.6E-39 320.4 21.9 195 169-407 14-214 (214)
295 TIGR02673 FtsE cell division A 100.0 2.3E-34 5E-39 320.1 22.2 194 169-406 15-214 (214)
296 COG4988 CydD ABC-type transpor 100.0 8.3E-35 1.8E-39 345.4 19.7 213 832-1073 317-538 (559)
297 PRK10771 thiQ thiamine transpo 100.0 2.7E-34 5.7E-39 323.5 23.0 211 836-1073 2-214 (232)
298 PRK13644 cbiO cobalt transport 100.0 3.9E-34 8.4E-39 329.5 24.7 204 169-417 15-223 (274)
299 PRK11308 dppF dipeptide transp 100.0 4.7E-34 1E-38 335.2 25.8 225 835-1073 5-239 (327)
300 COG0444 DppD ABC-type dipeptid 100.0 5.7E-34 1.2E-38 318.4 25.0 215 168-417 17-242 (316)
301 TIGR03608 L_ocin_972_ABC putat 100.0 2.5E-34 5.5E-39 317.8 22.1 189 861-1061 11-206 (206)
302 cd03233 ABC_PDR_domain1 The pl 100.0 4.2E-34 9.1E-39 314.5 23.7 180 167-411 18-202 (202)
303 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-34 7.9E-39 325.5 23.9 207 169-417 14-231 (247)
304 PRK13641 cbiO cobalt transport 100.0 3.4E-34 7.3E-39 332.2 23.9 205 169-417 20-233 (287)
305 PRK13645 cbiO cobalt transport 100.0 3.2E-34 6.8E-39 333.1 23.7 219 835-1073 6-235 (289)
306 PRK11247 ssuB aliphatic sulfon 100.0 2.6E-34 5.6E-39 326.9 22.3 195 169-414 25-219 (257)
307 KOG0057 Mitochondrial Fe/S clu 100.0 8.4E-35 1.8E-39 339.0 18.6 212 832-1073 348-569 (591)
308 TIGR03411 urea_trans_UrtD urea 100.0 4.7E-34 1E-38 323.7 24.4 212 169-417 15-230 (242)
309 cd03267 ABC_NatA_like Similar 100.0 3.4E-34 7.4E-39 323.1 23.1 201 859-1071 32-236 (236)
310 PRK11022 dppD dipeptide transp 100.0 8.2E-34 1.8E-38 333.3 26.9 214 169-418 20-243 (326)
311 TIGR03415 ABC_choXWV_ATP choli 100.0 3.1E-34 6.7E-39 339.9 23.5 203 859-1073 35-249 (382)
312 PRK13640 cbiO cobalt transport 100.0 3.9E-34 8.5E-39 330.8 23.8 217 835-1073 5-227 (282)
313 PRK13548 hmuV hemin importer A 100.0 4.3E-34 9.3E-39 326.5 23.7 206 169-417 15-229 (258)
314 COG4525 TauB ABC-type taurine 100.0 2.3E-34 4.9E-39 293.9 18.9 200 861-1073 18-219 (259)
315 TIGR02142 modC_ABC molybdenum 100.0 4.5E-34 9.8E-39 339.9 24.6 200 174-418 15-221 (354)
316 PRK14259 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 327.7 24.3 215 834-1073 12-248 (269)
317 PRK14268 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 326.2 24.1 206 169-417 25-241 (258)
318 cd03299 ABC_ModC_like Archeal 100.0 5.3E-34 1.1E-38 321.5 23.8 211 837-1073 2-214 (235)
319 TIGR03740 galliderm_ABC gallid 100.0 5.3E-34 1.2E-38 319.1 23.4 198 169-415 13-210 (223)
320 PRK13652 cbiO cobalt transport 100.0 5.1E-34 1.1E-38 329.2 23.9 206 169-417 17-226 (277)
321 PRK13638 cbiO cobalt transport 100.0 6.6E-34 1.4E-38 327.5 24.7 205 169-417 14-224 (271)
322 PRK15112 antimicrobial peptide 100.0 5.2E-34 1.1E-38 327.5 23.7 223 836-1073 5-234 (267)
323 TIGR03005 ectoine_ehuA ectoine 100.0 5.7E-34 1.2E-38 324.9 23.9 206 169-417 13-235 (252)
324 PRK11300 livG leucine/isoleuci 100.0 5.6E-34 1.2E-38 325.7 23.9 221 169-417 18-242 (255)
325 PRK10908 cell division protein 100.0 5E-34 1.1E-38 319.1 22.9 196 169-408 15-216 (222)
326 cd03297 ABC_ModC_molybdenum_tr 100.0 5.3E-34 1.1E-38 317.1 23.0 191 866-1071 16-214 (214)
327 cd03257 ABC_NikE_OppD_transpor 100.0 5.9E-34 1.3E-38 320.0 23.6 201 170-411 19-228 (228)
328 PRK11308 dppF dipeptide transp 100.0 7.9E-34 1.7E-38 333.3 25.6 208 169-418 28-244 (327)
329 PRK14244 phosphate ABC transpo 100.0 6.9E-34 1.5E-38 324.0 24.2 219 836-1073 6-232 (251)
330 PRK15093 antimicrobial peptide 100.0 8.5E-34 1.8E-38 334.4 25.7 226 835-1073 3-243 (330)
331 PRK11144 modC molybdate transp 100.0 5E-34 1.1E-38 338.9 24.0 190 866-1073 16-213 (352)
332 PRK14239 phosphate transporter 100.0 9E-34 1.9E-38 323.4 25.0 219 835-1073 5-231 (252)
333 cd03225 ABC_cobalt_CbiO_domain 100.0 4.4E-34 9.6E-39 317.1 21.8 194 169-406 14-211 (211)
334 PRK14274 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 324.6 24.8 219 835-1073 12-238 (259)
335 TIGR02142 modC_ABC molybdenum 100.0 5.3E-34 1.2E-38 339.3 24.0 194 866-1073 15-216 (354)
336 TIGR02211 LolD_lipo_ex lipopro 100.0 6.2E-34 1.4E-38 318.2 23.1 196 169-408 18-220 (221)
337 cd03234 ABCG_White The White s 100.0 6.2E-34 1.3E-38 319.2 23.1 203 168-411 19-226 (226)
338 PRK14270 phosphate ABC transpo 100.0 9E-34 1.9E-38 323.0 24.8 218 835-1073 4-230 (251)
339 COG4525 TauB ABC-type taurine 100.0 5E-34 1.1E-38 291.4 20.1 205 169-418 18-224 (259)
340 PRK10619 histidine/lysine/argi 100.0 7.7E-34 1.7E-38 324.6 24.2 205 169-417 18-240 (257)
341 KOG0066 eIF2-interacting prote 100.0 1.9E-33 4E-38 314.1 26.4 194 832-1065 583-778 (807)
342 PRK14240 phosphate transporter 100.0 1E-33 2.2E-38 322.5 25.0 215 835-1073 3-229 (250)
343 TIGR01978 sufC FeS assembly AT 100.0 7.2E-34 1.6E-38 322.5 23.7 213 169-417 13-233 (243)
344 PRK13639 cbiO cobalt transport 100.0 9.6E-34 2.1E-38 326.5 25.0 205 169-417 15-225 (275)
345 PRK14247 phosphate ABC transpo 100.0 8.7E-34 1.9E-38 323.0 24.2 209 169-417 16-233 (250)
346 PRK14262 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.5 24.7 218 836-1073 4-229 (250)
347 TIGR02769 nickel_nikE nickel i 100.0 9.9E-34 2.1E-38 325.0 24.7 208 168-417 23-239 (265)
348 TIGR02770 nickel_nikD nickel i 100.0 7.8E-34 1.7E-38 319.1 23.4 204 171-417 1-214 (230)
349 COG1245 Predicted ATPase, RNas 100.0 4.1E-33 8.9E-38 316.0 29.1 173 864-1062 357-530 (591)
350 cd03235 ABC_Metallic_Cations A 100.0 4.3E-34 9.3E-39 317.6 21.0 201 168-411 11-213 (213)
351 PRK14253 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.3 24.5 219 835-1073 3-228 (249)
352 PRK10418 nikD nickel transport 100.0 1E-33 2.3E-38 322.9 24.7 214 834-1073 3-225 (254)
353 PRK13642 cbiO cobalt transport 100.0 9.2E-34 2E-38 327.0 24.4 216 835-1073 4-224 (277)
354 PRK14257 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 330.6 26.8 211 169-417 95-312 (329)
355 PRK14273 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 324.5 23.2 207 169-417 20-237 (254)
356 PRK14260 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 323.5 24.8 216 835-1073 7-238 (259)
357 PRK11124 artP arginine transpo 100.0 7.3E-34 1.6E-38 322.1 22.6 204 169-416 15-228 (242)
358 PRK14250 phosphate ABC transpo 100.0 8.2E-34 1.8E-38 321.2 23.0 201 169-417 16-220 (241)
359 PRK13649 cbiO cobalt transport 100.0 1.4E-33 2.9E-38 326.6 25.1 205 169-417 20-233 (280)
360 cd03300 ABC_PotA_N PotA is an 100.0 1.5E-33 3.2E-38 317.3 24.8 206 169-417 13-219 (232)
361 TIGR01184 ntrCD nitrate transp 100.0 8E-34 1.7E-38 318.8 22.5 202 172-416 1-202 (230)
362 PRK14272 phosphate ABC transpo 100.0 1.8E-33 3.8E-38 321.0 25.7 216 835-1073 4-231 (252)
363 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-33 2.5E-38 315.7 23.5 211 836-1067 2-219 (220)
364 PRK10762 D-ribose transporter 100.0 7.7E-34 1.7E-38 354.8 24.7 218 836-1075 5-227 (501)
365 PRK13648 cbiO cobalt transport 100.0 1.5E-33 3.2E-38 324.3 25.0 204 170-417 23-230 (269)
366 PRK14258 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 322.3 25.3 221 835-1073 7-240 (261)
367 PRK14257 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 331.0 25.2 221 834-1073 79-308 (329)
368 PRK11701 phnK phosphonate C-P 100.0 1.5E-33 3.3E-38 322.4 24.7 215 835-1073 6-236 (258)
369 PRK14236 phosphate transporter 100.0 2E-33 4.2E-38 323.6 25.7 219 835-1073 25-251 (272)
370 PRK13543 cytochrome c biogenes 100.0 1.1E-33 2.4E-38 314.2 22.9 201 835-1062 11-211 (214)
371 PRK14267 phosphate ABC transpo 100.0 1.2E-33 2.6E-38 322.4 23.7 213 169-417 17-236 (253)
372 COG1132 MdlB ABC-type multidru 100.0 8.4E-34 1.8E-38 360.2 24.7 209 168-418 341-552 (567)
373 PRK15093 antimicrobial peptide 100.0 2.6E-33 5.6E-38 330.3 27.0 218 169-417 20-247 (330)
374 PRK10253 iron-enterobactin tra 100.0 8.7E-34 1.9E-38 325.4 22.3 210 169-417 20-232 (265)
375 PRK09700 D-allose transporter 100.0 8.9E-34 1.9E-38 355.3 24.1 219 835-1075 5-231 (510)
376 PRK13538 cytochrome c biogenes 100.0 1E-33 2.2E-38 312.3 21.7 197 836-1060 2-201 (204)
377 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.1E-33 2.4E-38 313.8 22.2 195 174-411 16-211 (211)
378 PRK14271 phosphate ABC transpo 100.0 3.8E-33 8.1E-38 321.4 27.3 219 835-1073 21-246 (276)
379 cd03299 ABC_ModC_like Archeal 100.0 2.2E-33 4.7E-38 316.5 24.7 204 171-417 14-218 (235)
380 PRK10575 iron-hydroxamate tran 100.0 1E-33 2.2E-38 324.9 22.3 210 169-417 24-236 (265)
381 TIGR02770 nickel_nikD nickel i 100.0 1E-33 2.3E-38 318.1 22.0 201 863-1073 1-210 (230)
382 PRK09984 phosphonate/organopho 100.0 1.2E-33 2.5E-38 324.1 22.6 216 169-416 17-240 (262)
383 PRK14249 phosphate ABC transpo 100.0 2.3E-33 5E-38 319.6 24.9 219 835-1073 4-230 (251)
384 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-32 3.2E-37 357.4 35.8 211 834-1073 472-692 (708)
385 cd03231 ABC_CcmA_heme_exporter 100.0 9.6E-34 2.1E-38 311.6 21.0 195 837-1061 2-198 (201)
386 KOG0055 Multidrug/pheromone ex 100.0 1.5E-33 3.2E-38 357.8 25.6 214 833-1073 348-571 (1228)
387 PRK13640 cbiO cobalt transport 100.0 2.1E-33 4.6E-38 324.6 24.8 208 169-417 20-231 (282)
388 PRK11231 fecE iron-dicitrate t 100.0 1.1E-33 2.4E-38 322.9 22.2 209 169-417 15-226 (255)
389 cd03262 ABC_HisP_GlnQ_permease 100.0 8.8E-34 1.9E-38 315.2 20.6 195 169-407 13-213 (213)
390 PRK10744 pstB phosphate transp 100.0 3.1E-33 6.7E-38 320.1 25.6 210 170-417 27-243 (260)
391 PRK14261 phosphate ABC transpo 100.0 2.4E-33 5.3E-38 319.9 24.6 218 835-1073 6-232 (253)
392 PRK14242 phosphate transporter 100.0 1.7E-33 3.6E-38 321.3 23.2 211 169-417 19-236 (253)
393 PRK13642 cbiO cobalt transport 100.0 4.5E-33 9.8E-38 321.3 27.0 205 169-417 20-228 (277)
394 PRK13645 cbiO cobalt transport 100.0 1.4E-33 3.1E-38 327.6 22.9 205 170-417 25-239 (289)
395 TIGR00968 3a0106s01 sulfate AB 100.0 2.6E-33 5.6E-38 316.3 24.3 206 169-417 13-219 (237)
396 PRK11174 cysteine/glutathione 100.0 6E-34 1.3E-38 363.5 21.5 210 834-1073 348-567 (588)
397 PRK14248 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 322.8 24.1 215 835-1073 21-247 (268)
398 COG0444 DppD ABC-type dipeptid 100.0 2.4E-33 5.2E-38 313.4 23.4 224 836-1073 2-238 (316)
399 PRK10584 putative ABC transpor 100.0 2.6E-33 5.6E-38 314.8 23.9 197 170-410 24-227 (228)
400 TIGR03873 F420-0_ABC_ATP propo 100.0 1.9E-33 4.1E-38 321.2 23.2 209 169-417 14-225 (256)
401 PRK14263 phosphate ABC transpo 100.0 3.2E-33 7E-38 319.5 25.0 219 834-1073 7-240 (261)
402 PRK14241 phosphate transporter 100.0 2.2E-33 4.8E-38 321.1 23.7 208 169-417 17-241 (258)
403 PRK14270 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 319.3 24.0 207 169-417 17-234 (251)
404 PRK15056 manganese/iron transp 100.0 1.9E-33 4.1E-38 323.7 23.1 218 835-1074 6-226 (272)
405 PRK14235 phosphate transporter 100.0 2.5E-33 5.4E-38 321.8 24.1 212 169-417 32-250 (267)
406 PRK14275 phosphate ABC transpo 100.0 2.8E-33 6.2E-38 324.1 24.7 215 835-1073 39-265 (286)
407 PRK14245 phosphate ABC transpo 100.0 2.2E-33 4.8E-38 319.7 23.2 210 169-417 16-233 (250)
408 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2E-33 4.3E-38 364.2 26.0 205 169-418 466-673 (686)
409 PRK14251 phosphate ABC transpo 100.0 3.3E-33 7.1E-38 318.5 24.6 215 835-1073 4-230 (251)
410 TIGR00630 uvra excinuclease AB 100.0 4.6E-32 9.9E-37 349.4 38.1 123 935-1073 789-920 (924)
411 PRK14237 phosphate transporter 100.0 6.9E-33 1.5E-37 318.2 27.3 211 169-417 33-250 (267)
412 TIGR02633 xylG D-xylose ABC tr 100.0 2.3E-33 4.9E-38 351.0 25.3 220 836-1075 2-227 (500)
413 PRK14256 phosphate ABC transpo 100.0 3.6E-33 7.8E-38 318.3 24.8 212 169-417 17-235 (252)
414 PRK15112 antimicrobial peptide 100.0 2.8E-33 6E-38 321.5 23.9 207 169-417 26-238 (267)
415 PRK15439 autoinducer 2 ABC tra 100.0 1.8E-33 3.9E-38 351.7 24.3 211 835-1074 11-225 (510)
416 COG4618 ArpD ABC-type protease 100.0 1.4E-33 3.1E-38 325.2 21.4 235 113-420 325-562 (580)
417 PRK10771 thiQ thiamine transpo 100.0 2.5E-33 5.4E-38 315.6 23.0 202 174-418 17-219 (232)
418 PRK14254 phosphate ABC transpo 100.0 3.5E-33 7.6E-38 322.9 24.8 214 835-1073 39-264 (285)
419 PRK10419 nikE nickel transport 100.0 3.2E-33 7E-38 320.9 24.1 224 836-1074 4-237 (268)
420 cd03252 ABCC_Hemolysin The ABC 100.0 7.3E-34 1.6E-38 321.1 18.5 210 836-1073 1-220 (237)
421 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.7E-33 5.8E-38 313.2 22.6 192 859-1071 33-224 (224)
422 PRK11176 lipid transporter ATP 100.0 1.9E-33 4E-38 358.8 24.2 209 169-418 356-567 (582)
423 PRK14255 phosphate ABC transpo 100.0 6E-33 1.3E-37 316.6 25.7 218 835-1073 5-231 (252)
424 PRK14274 phosphate ABC transpo 100.0 3.6E-33 7.7E-38 319.5 23.8 211 169-417 25-242 (259)
425 PRK14269 phosphate ABC transpo 100.0 4.3E-33 9.4E-38 316.4 24.2 212 169-417 15-229 (246)
426 cd03230 ABC_DR_subfamily_A Thi 100.0 2E-33 4.4E-38 301.5 20.3 168 837-1064 2-171 (173)
427 PRK13539 cytochrome c biogenes 100.0 2.3E-33 5E-38 310.1 21.3 197 836-1062 3-199 (207)
428 PRK10247 putative ABC transpor 100.0 2.4E-33 5.3E-38 314.0 21.8 209 835-1071 7-220 (225)
429 cd03297 ABC_ModC_molybdenum_tr 100.0 3.8E-33 8.2E-38 310.2 23.2 197 167-411 11-214 (214)
430 PRK11701 phnK phosphonate C-P 100.0 5E-33 1.1E-37 318.1 24.7 207 169-417 19-240 (258)
431 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-33 2.7E-38 366.1 22.3 209 834-1073 450-668 (686)
432 TIGR01166 cbiO cobalt transpor 100.0 1.8E-33 4E-38 306.8 20.1 178 861-1048 5-188 (190)
433 COG4152 ABC-type uncharacteriz 100.0 1.4E-33 3E-38 298.2 18.3 214 162-420 8-221 (300)
434 PRK10790 putative multidrug tr 100.0 3.7E-33 7.9E-38 356.4 26.1 206 170-418 355-563 (592)
435 PRK11288 araG L-arabinose tran 100.0 3E-33 6.5E-38 349.5 24.7 217 835-1073 4-224 (501)
436 CHL00131 ycf16 sulfate ABC tra 100.0 7.3E-33 1.6E-37 315.9 25.5 220 835-1073 7-236 (252)
437 TIGR01277 thiQ thiamine ABC tr 100.0 4.8E-33 1E-37 309.1 23.4 199 171-412 13-212 (213)
438 PRK14239 phosphate transporter 100.0 4.5E-33 9.8E-38 317.6 23.7 211 169-417 18-235 (252)
439 COG1132 MdlB ABC-type multidru 100.0 7.2E-34 1.6E-38 360.8 18.9 211 834-1073 327-547 (567)
440 cd03245 ABCC_bacteriocin_expor 100.0 2E-33 4.4E-38 313.8 20.2 209 836-1071 3-220 (220)
441 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.6E-33 5.7E-38 364.8 24.6 206 169-418 492-700 (710)
442 COG4604 CeuD ABC-type enteroch 100.0 2.5E-34 5.5E-39 294.3 11.7 214 836-1074 2-221 (252)
443 PRK14238 phosphate transporter 100.0 4.8E-33 1E-37 320.1 23.7 218 835-1073 24-250 (271)
444 TIGR02323 CP_lyasePhnK phospho 100.0 5.3E-33 1.1E-37 317.2 23.9 215 835-1073 3-233 (253)
445 PRK14265 phosphate ABC transpo 100.0 6.6E-33 1.4E-37 319.2 24.9 219 834-1073 19-253 (274)
446 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.9E-33 6.2E-38 320.4 21.6 210 835-1073 2-220 (275)
447 PRK10982 galactose/methyl gala 100.0 2.8E-33 6E-38 349.2 23.3 206 861-1075 11-220 (491)
448 KOG0056 Heavy metal exporter H 100.0 6.4E-34 1.4E-38 322.4 15.6 209 168-418 550-761 (790)
449 PRK14248 phosphate ABC transpo 100.0 1.7E-32 3.7E-37 315.4 27.7 208 169-417 34-251 (268)
450 TIGR01846 type_I_sec_HlyB type 100.0 4.7E-32 1E-36 351.6 35.1 212 834-1073 454-675 (694)
451 COG4987 CydC ABC-type transpor 100.0 1.4E-33 3E-38 328.8 18.5 202 168-418 350-561 (573)
452 PRK14243 phosphate transporter 100.0 6.6E-33 1.4E-37 317.8 23.8 218 835-1073 10-243 (264)
453 PRK14262 phosphate ABC transpo 100.0 7.3E-33 1.6E-37 315.5 23.9 211 169-417 16-233 (250)
454 PRK10790 putative multidrug tr 100.0 2.1E-33 4.5E-38 358.6 21.6 210 834-1073 339-558 (592)
455 PRK10418 nikD nickel transport 100.0 1E-32 2.3E-37 314.6 24.9 206 170-417 17-229 (254)
456 PRK11160 cysteine/glutathione 100.0 4.9E-33 1.1E-37 352.7 24.6 201 169-418 353-562 (574)
457 KOG0059 Lipid exporter ABCA1 a 100.0 1.1E-31 2.4E-36 351.9 38.0 206 863-1085 580-790 (885)
458 PRK14246 phosphate ABC transpo 100.0 8.9E-33 1.9E-37 315.2 24.1 219 835-1073 10-236 (257)
459 PRK14240 phosphate transporter 100.0 7.5E-33 1.6E-37 315.4 23.5 211 169-417 16-233 (250)
460 PRK14259 phosphate ABC transpo 100.0 5E-33 1.1E-37 319.6 22.1 210 169-418 26-253 (269)
461 PRK11176 lipid transporter ATP 100.0 2.5E-33 5.4E-38 357.6 21.7 213 834-1073 340-562 (582)
462 PRK11160 cysteine/glutathione 100.0 2.5E-33 5.5E-38 355.2 21.6 212 834-1073 337-557 (574)
463 PRK14272 phosphate ABC transpo 100.0 9.5E-33 2.1E-37 315.0 24.2 208 169-417 17-235 (252)
464 PRK14266 phosphate ABC transpo 100.0 8.6E-33 1.9E-37 314.9 23.8 219 835-1073 3-229 (250)
465 PRK14244 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 315.5 23.2 212 169-417 18-236 (251)
466 PRK14263 phosphate ABC transpo 100.0 7.6E-33 1.6E-37 316.5 23.3 212 166-417 18-244 (261)
467 PRK03695 vitamin B12-transport 100.0 6.3E-33 1.4E-37 315.0 22.5 197 863-1073 11-217 (248)
468 cd03251 ABCC_MsbA MsbA is an e 100.0 1.5E-33 3.2E-38 318.0 17.3 209 837-1073 2-220 (234)
469 PRK14275 phosphate ABC transpo 100.0 4.4E-33 9.6E-38 322.5 21.5 207 169-417 52-269 (286)
470 PRK13547 hmuV hemin importer A 100.0 7.6E-33 1.6E-37 317.5 23.1 213 169-417 14-243 (272)
471 TIGR03375 type_I_sec_LssB type 100.0 6.9E-33 1.5E-37 359.7 25.4 208 169-418 478-688 (694)
472 PRK09580 sufC cysteine desulfu 100.0 1.3E-32 2.7E-37 313.2 24.4 219 836-1073 2-230 (248)
473 TIGR01189 ccmA heme ABC export 100.0 5.8E-33 1.3E-37 304.8 20.9 185 837-1048 2-188 (198)
474 PRK14251 phosphate ABC transpo 100.0 9.2E-33 2E-37 314.8 23.2 211 169-417 17-234 (251)
475 cd03229 ABC_Class3 This class 100.0 3.8E-33 8.3E-38 300.8 18.8 170 837-1064 2-177 (178)
476 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.4E-33 5.1E-38 365.2 20.7 210 834-1073 476-695 (710)
477 COG4604 CeuD ABC-type enteroch 100.0 7.8E-34 1.7E-38 290.8 12.6 216 162-418 7-225 (252)
478 PRK14271 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 316.4 24.9 211 169-417 34-250 (276)
479 PRK14253 phosphate ABC transpo 100.0 9.7E-33 2.1E-37 314.2 23.0 211 169-417 16-232 (249)
480 cd03254 ABCC_Glucan_exporter_l 100.0 2.8E-33 6.1E-38 314.7 18.3 211 835-1073 2-221 (229)
481 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.7E-33 5.9E-38 316.6 18.2 210 837-1073 2-221 (238)
482 COG4987 CydC ABC-type transpor 100.0 1.1E-33 2.4E-38 329.6 15.2 213 834-1074 335-557 (573)
483 COG4148 ModC ABC-type molybdat 100.0 1.4E-33 3E-38 303.0 14.7 196 174-418 16-218 (352)
484 TIGR01193 bacteriocin_ABC ABC- 100.0 8.5E-33 1.8E-37 359.6 25.1 208 169-418 487-697 (708)
485 TIGR00958 3a01208 Conjugate Tr 100.0 5.8E-33 1.3E-37 359.7 23.4 206 169-418 494-702 (711)
486 PRK13540 cytochrome c biogenes 100.0 8.3E-33 1.8E-37 304.0 20.7 194 836-1059 2-197 (200)
487 COG4181 Predicted ABC-type tra 100.0 1E-32 2.2E-37 276.2 19.3 201 165-409 19-226 (228)
488 PRK14249 phosphate ABC transpo 100.0 1.9E-32 4.2E-37 312.1 24.3 211 169-417 17-234 (251)
489 PRK14260 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 314.8 22.9 207 169-417 20-242 (259)
490 PRK14252 phosphate ABC transpo 100.0 2.8E-32 6E-37 313.1 25.7 219 834-1073 15-244 (265)
491 TIGR02324 CP_lyasePhnL phospho 100.0 1.4E-32 3.1E-37 307.8 22.8 210 836-1062 2-223 (224)
492 PRK14264 phosphate ABC transpo 100.0 2E-32 4.4E-37 319.7 24.9 221 835-1073 45-284 (305)
493 PRK13546 teichoic acids export 100.0 2.6E-32 5.6E-37 311.5 25.1 219 834-1074 3-228 (264)
494 PRK14261 phosphate ABC transpo 100.0 1.9E-32 4E-37 312.6 23.8 211 169-417 19-236 (253)
495 cd03215 ABC_Carb_Monos_II This 100.0 8.2E-33 1.8E-37 299.3 19.7 170 836-1066 5-181 (182)
496 PRK03695 vitamin B12-transport 100.0 1.8E-32 4E-37 311.3 23.3 201 171-417 11-221 (248)
497 TIGR03608 L_ocin_972_ABC putat 100.0 1.4E-32 3.1E-37 303.8 21.9 190 168-402 10-206 (206)
498 PRK14246 phosphate ABC transpo 100.0 3E-32 6.5E-37 310.8 24.9 210 167-417 21-240 (257)
499 TIGR02323 CP_lyasePhnK phospho 100.0 2.1E-32 4.7E-37 312.2 23.8 207 169-417 16-237 (253)
500 TIGR03375 type_I_sec_LssB type 100.0 5.9E-33 1.3E-37 360.3 21.7 212 834-1073 462-683 (694)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-258 Score=2378.56 Aligned_cols=1340 Identities=54% Similarity=0.924 Sum_probs=1255.8
Q ss_pred CCcHHhhHHHHHhhCCChhhhhhcccccCCCCccccccCCCChhhhHHHHHHHHhhccCChHHHHHHHHHHHhhcCCCCC
Q 000541 40 EDDEEALKWAALEKLPTYNRLKKGILTSSRGEANEVDVCNLGPQERQRIIDKLVKVADVDNEEFLLKLKNRIDRVGISLP 119 (1433)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 119 (1433)
+||||++||||+|||||++| +.+.+... .++|+.++++.+++.++++..+..++|+|+++.++++|.+++ +.|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 44999999999999999998 55543211 279999999999999999999999999999999999999997 899
Q ss_pred ceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHH
Q 000541 120 TIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLL 199 (1433)
Q Consensus 120 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL 199 (1433)
.++++++++.+++++..| ||+.|...+..+..++..+.. ++.+.+||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999988765 999999999888777665544 45667899999999999999999999999999999
Q ss_pred HHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCC
Q 000541 200 LALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGI 279 (1433)
Q Consensus 200 ~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1433)
++|+|.++..++..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|+++++|++ ++.|+|+.+
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998877889999999999999999999999999999999999999999999999998876 666666532
Q ss_pred CCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCC
Q 000541 280 KPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLD 359 (1433)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD 359 (1433)
.++|++++++||++|+||+|||+++||+||||||||++|++++++++++||||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHh
Q 000541 360 SSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQE 439 (1433)
Q Consensus 360 ~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~e 439 (1433)
++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHH
Q 000541 440 VTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLL 519 (1433)
Q Consensus 440 vts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~ 519 (1433)
+++++++.++|..+..|+.+.+++||.+.|..++.++++..+++.++++.+.++.++..++|.++.|+|++.|+.|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcc
Q 000541 520 MKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFY 599 (1433)
Q Consensus 520 ~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y 599 (1433)
++||.+.++++.++.+++|+++|++|+++.+ ++..++..+.|++||++++.+|++++|+.++++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999985 55667788999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHH
Q 000541 600 PSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFAL 679 (1433)
Q Consensus 600 ~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~ 679 (1433)
++||++++++++++|++++++++|.+|+||++|+.+++++||.+|+++++.+++++++||+++++++++.+|+++|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCcccccCCCC---------------CCchHHHHhhcc
Q 000541 680 LLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNSWRKVLPNT---------------TEPLGVQVLKSR 744 (1433)
Q Consensus 680 ~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~---------------~~~~G~~~L~~~ 744 (1433)
+++.+++||+|+..+||+||+|++|+||++|+++++++|||++.+|.|.+.++ ..++|..+++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 99999999999999999999999999999999999999999999999984322 356799999999
Q ss_pred Ccc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCccccccCCCcchhhhh
Q 000541 745 GFF-----TDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGTIQLSTSGRSKAEVKA 819 (1433)
Q Consensus 745 ~~~-----~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1433)
++. ...+|+|+++|+++||.++|++.+++++.|+++....+..+..+...+......... .. +.......
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~---~~--~~~~~~~s 765 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGS---SS--EIEKLDDS 765 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccc---cc--cccccccc
Confidence 888 777899999999999999999999999999999988888766443322211100000 00 00000011
Q ss_pred ccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC
Q 000541 820 NHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT 899 (1433)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~ 899 (1433)
...+++++..|+.|..++++||.|.+++|.+++.+| +++++|+||||.++||.++||||+||||||||||+|+||++
T Consensus 766 ~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t 842 (1391)
T KOG0065|consen 766 SHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKT 842 (1391)
T ss_pred cccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcc
Confidence 111356778888899999999999999998887766 67889999999999999999999999999999999999999
Q ss_pred CCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccccc
Q 000541 900 GGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQAL 979 (1433)
Q Consensus 900 ~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~ 979 (1433)
+|.++|+|+|||+|+++.+|+|.+|||+|+|.|.+.+||||.|.|+|+||+|.+++.+++.++||+|++.|||.+++|.+
T Consensus 843 ~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~dai 922 (1391)
T KOG0065|consen 843 GGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADAL 922 (1391)
T ss_pred cceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhh
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCC-CeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcce
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDEL 1058 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p-~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~ 1058 (1433)
||.|| +|||++|||||+||+||++|| .||||||||||||+++|..|++.+|+++++|+||||||||||.++++.||++
T Consensus 923 VG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~L 1001 (1391)
T KOG0065|consen 923 VGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDEL 1001 (1391)
T ss_pred ccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHH
Confidence 99999 999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCcEEEEEcCCCcChhHHHHHHhhCCCccCCCCCCCcccceEEecCCcccccccccHHHHHHhcHHHHHHHHHHHh
Q 000541 1059 FLLKRGGQEIYVGSLGRHSSHLIKYFEGIRGVSKIKDGYNPATWMLEVTAPSQETALGIDFADIYKSSELYRRNKALIKD 1138 (1433)
Q Consensus 1059 ~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~ 1138 (1433)
++|++||++||+||+|++++++++|||+++|++ |++..|||||||||++.+.+.+.+.||+++|++|++++++++++++
T Consensus 1002 LLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v~~ 1080 (1391)
T KOG0065|consen 1002 LLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELVKE 1080 (1391)
T ss_pred HHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHHHH
Confidence 999999999999999999999999999999985 6666699999999999998888899999999999999999999999
Q ss_pred hcCCCCC-CCCCcCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHH
Q 000541 1139 ISKPAPG-SKDLHFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMG 1217 (1433)
Q Consensus 1139 ~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g 1217 (1433)
+++++++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||++|+ ++||++|.+|
T Consensus 1081 l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~m~ 1157 (1391)
T KOG0065|consen 1081 LSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNAMG 1157 (1391)
T ss_pred HhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHHHH
Confidence 9999988 78888899999999999999999999999999999999999999999999999999995 6899999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhHHHH
Q 000541 1218 SMYTAVLFLGVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAKFLW 1297 (1433)
Q Consensus 1218 ~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~ 1297 (1433)
++|+++++.+..++...+|.+..||.+++||+++|||||.||++|++++|+||.++++++|.+|+|+|+||++++.+|+|
T Consensus 1158 a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~ 1237 (1391)
T KOG0065|consen 1158 AAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFW 1237 (1391)
T ss_pred HHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHH
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCC
Q 000541 1298 YQFFMFFTLLYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGD 1377 (1433)
Q Consensus 1298 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~ 1377 (1433)
|+++++++.+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+||||+||++|.++|++..++||
T Consensus 1238 f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d 1317 (1391)
T KOG0065|consen 1238 FLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGD 1317 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC----------CCCcHHHHHHhhhC----CcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000541 1378 IQDRLE----------SGETVEQFLRSFFG----FKHDFLGVVAAVVFAFPVLFALIFAVGIKVFNFQKR 1433 (1433)
Q Consensus 1378 ~~~~~~----------~~~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1433 (1433)
.+..|. +|+||++|++.++| |.++.......+.++|.+.+.+++.+++|+.|||||
T Consensus 1318 ~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1318 VEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred CceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 998884 35699999999999 999999999999999999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.7e-238 Score=2364.16 Aligned_cols=1404 Identities=62% Similarity=1.082 Sum_probs=1267.9
Q ss_pred CcccCC---CC---CCCCcHHhhHHHHHhhCCChhhhhhcccccC-----CCC---ccccccCCCChhhhHHHHHHHHhh
Q 000541 30 GAFSMS---SR---GEEDDEEALKWAALEKLPTYNRLKKGILTSS-----RGE---ANEVDVCNLGPQERQRIIDKLVKV 95 (1433)
Q Consensus 30 ~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1433)
++|++. ++ ..|||||+|+|||+||||||+|+|++++... .|+ ..|+|+++||.++++.++++++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (1470)
T PLN03140 25 DVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKV 104 (1470)
T ss_pred hhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhcc
Confidence 788542 11 3678999999999999999999999999653 122 236999999999999999999999
Q ss_pred ccCChHHHHHHHHHHHhhcCCCCCceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeece
Q 000541 96 ADVDNEEFLLKLKNRIDRVGISLPTIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDV 175 (1433)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 175 (1433)
.++|+++++.++++|.+++|+++|+++|+|+||+|++++.++++.+||++|.+.+.++.+.+..+...+++.+++||+||
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~v 184 (1470)
T PLN03140 105 AEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDA 184 (1470)
T ss_pred cchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCC
Confidence 99999999999999999999999999999999999999989999999999999998887665444333444568899999
Q ss_pred EEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHH
Q 000541 176 SGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSA 255 (1433)
Q Consensus 176 s~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~ 255 (1433)
|+.++|||+++|+||||||||||||+|+|+++++.+++|+|.|||+++++..+++.++||+|+|.|++++||+|||.|++
T Consensus 185 s~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a 264 (1470)
T PLN03140 185 SGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSA 264 (1470)
T ss_pred eEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHH
Confidence 99999999999999999999999999999998877789999999999887766788999999999999999999999999
Q ss_pred HhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhH
Q 000541 256 RCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKR 335 (1433)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqR 335 (1433)
+|++.+.+.++..+..++++..++.|+.+++.+|++...++.+.+..++.+|+.+||++|+||.||++++++||||||||
T Consensus 265 ~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkR 344 (1470)
T PLN03140 265 RCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKR 344 (1470)
T ss_pred HhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCccccee
Confidence 99887766656666777787777888888888999988888878888999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhH
Q 000541 336 VTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREH 415 (1433)
Q Consensus 336 vsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~ 415 (1433)
|+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+||+++
T Consensus 345 Vsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~ 424 (1470)
T PLN03140 345 VTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDH 424 (1470)
T ss_pred eeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHH
Confidence 99999999999999999999999999999999999999876677888888999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCccccccccccc
Q 000541 416 VLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIPFDKRKSHRAA 495 (1433)
Q Consensus 416 ~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~ 495 (1433)
+.+||+++||+||+++|+|||+++++++++++++|.....|+++.++++|+++|+.++.++++.++++.+.++.+.++..
T Consensus 425 ~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 504 (1470)
T PLN03140 425 ILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAA 504 (1470)
T ss_pred HHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhccccc
Confidence 99999999999999999999999999998888888777778888899999999999999888888877776665556655
Q ss_pred cccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHHHHHHHHHHHHH
Q 000541 496 LTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGALFFIVLMIMFN 575 (1433)
Q Consensus 496 ~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~il~~~~~ 575 (1433)
...++|..++++|++.|++|++++++||+..+++|+++.+++|+++|++||+++++.....++..+.|++||++++.+++
T Consensus 505 ~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~ 584 (1470)
T PLN03140 505 LVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFN 584 (1470)
T ss_pred ccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 66678999999999999999999999999999999999999999999999999877665667788899999999999999
Q ss_pred HhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHHHHHHHH
Q 000541 576 GMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLFLNQMAS 655 (1433)
Q Consensus 576 ~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~ 655 (1433)
+++++..++.+||||+|||+.+||++|+|++++++.++|+.++++++|++|+|||+|+++++++||.+++++++++++++
T Consensus 585 ~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~ 664 (1470)
T PLN03140 585 GFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAA 664 (1470)
T ss_pred HHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCccccc-CCCCCC
Q 000541 656 ALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNSWRKV-LPNTTE 734 (1433)
Q Consensus 656 ~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~~~~~-~~~~~~ 734 (1433)
++|++++++++++.+|+++++++++++++|+||++++++||+||+|++|+||++|+++++++|||.+.+|.+. +.+...
T Consensus 665 ~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~ 744 (1470)
T PLN03140 665 GIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNST 744 (1470)
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888643 223356
Q ss_pred chHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccC--C-----C---C-C
Q 000541 735 PLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDN--R-----T---G-G 803 (1433)
Q Consensus 735 ~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~--~-----~---~-~ 803 (1433)
+.|..+|+.+|+..++.|+|++++++++++++|++++++++++.++....+....++........ . . . .
T Consensus 745 ~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1470)
T PLN03140 745 RLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNN 824 (1470)
T ss_pred ccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccccccccccc
Confidence 78999999999999899999999999999999999999999999876665554322111000000 0 0 0 0
Q ss_pred ---cc----ccccC----CCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEe
Q 000541 804 ---TI----QLSTS----GRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFR 872 (1433)
Q Consensus 804 ---~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~ 872 (1433)
.. ..... .............+.++.+|+.|..++|+||+|.++.+.+++..+...+++++|+|||+.++
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~ 904 (1470)
T PLN03140 825 TREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFR 904 (1470)
T ss_pred cccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEE
Confidence 00 00000 00000000011223456678888999999999999988766555555566789999999999
Q ss_pred CCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC
Q 000541 873 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL 952 (1433)
Q Consensus 873 ~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~ 952 (1433)
|||++|||||||||||||||+|+|+.++++.+|+|.+||++.++..+++.+|||+|+|.+++.+||+|+|.|++.+|+|.
T Consensus 905 ~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~ 984 (1470)
T PLN03140 905 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPK 984 (1470)
T ss_pred CCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCC
Confidence 99999999999999999999999998776789999999998765556778999999999999999999999999998877
Q ss_pred CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHH
Q 000541 953 EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1032 (1433)
Q Consensus 953 ~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~ 1032 (1433)
+.+.++++++++++++.++|.+++|+.+|.+++++|||||||||+||++|+++|+||||||||||||+.++..+++.|++
T Consensus 985 ~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~ 1064 (1470)
T PLN03140 985 EVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1064 (1470)
T ss_pred CCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 66666777889999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCcChhHHHHHHhhCCCccCCCCCCCcccceEEecCCccc
Q 000541 1033 TVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGRHSSHLIKYFEGIRGVSKIKDGYNPATWMLEVTAPSQE 1112 (1433)
Q Consensus 1033 ~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~ 1112 (1433)
++++|+|||||+|||+.++++.||++++|.+||+++|+|+.+++++++++||++++|+++||+++||||||||+++.+.+
T Consensus 1065 l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~ 1144 (1470)
T PLN03140 1065 TVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAE 1144 (1470)
T ss_pred HHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhccccc
Confidence 99899999999999998889999999999988999999999999999999999998888899999999999999987666
Q ss_pred ccccccHHHHHHhcHHHHHHHHHHHhhcCCCCCCCCCcCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHH
Q 000541 1113 TALGIDFADIYKSSELYRRNKALIKDISKPAPGSKDLHFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIA 1192 (1433)
Q Consensus 1113 ~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~ 1192 (1433)
...+.||++.|++|++++++++.+++++.++++.++..++++|++|+|+|++.|+||+++++||||.|+.+|+++++++|
T Consensus 1145 ~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~a 1224 (1470)
T PLN03140 1145 VKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAA 1224 (1470)
T ss_pred ccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHH
Confidence 66667999999999999999888888877666666666678899999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHH
Q 000541 1193 LAFGTMFWDMGTKTKKQQDLFNAMGSMYTAVLFLGVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIF 1272 (1433)
Q Consensus 1193 l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~ 1272 (1433)
+++|++||+++++..+++++++++|++|++++|+++.++++++|.|..||+||+|||++|+|++.+|++|++++|+|+.+
T Consensus 1225 l~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~ 1304 (1470)
T PLN03140 1225 LMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVL 1304 (1470)
T ss_pred HHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHH
Confidence 99999999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhheecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcc
Q 000541 1273 VQSVTYGVIVYAMIGFEWTAAKFLWYQFFMFFTLLYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPI 1352 (1433)
Q Consensus 1273 ~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~ 1352 (1433)
+++++|++|+|||+||++++.+||||+++++++.++++++|+++++++|+.++|+++++++++++++||||++|+++||+
T Consensus 1305 ~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~ 1384 (1470)
T PLN03140 1305 IQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPK 1384 (1470)
T ss_pred HHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcHHHHHHHHHHHHHhCCcccccCC-----CCcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 000541 1353 WWRWYYWACPVSWTLYGLVASQFGDIQDRLES-----GETVEQFLRSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKV 1427 (1433)
Q Consensus 1353 ~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1427 (1433)
||+|+||+||++|+++|+++|||+|.+..|++ ++++++|+.++|||+++++|++++++++|+++|++++++++|+
T Consensus 1385 ~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~ 1464 (1470)
T PLN03140 1385 WWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRT 1464 (1470)
T ss_pred HHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876542 3578999999999999999999999999999999999999999
Q ss_pred hcccCC
Q 000541 1428 FNFQKR 1433 (1433)
Q Consensus 1428 ~~~~~r 1433 (1433)
+|||||
T Consensus 1465 ~~~q~r 1470 (1470)
T PLN03140 1465 LNFQTR 1470 (1470)
T ss_pred hhcccC
Confidence 999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.8e-188 Score=1892.41 Aligned_cols=1279 Identities=31% Similarity=0.530 Sum_probs=1062.5
Q ss_pred cCChHHHHHHHHHHHhhcCCCCC--ceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeec
Q 000541 97 DVDNEEFLLKLKNRIDRVGISLP--TIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKD 174 (1433)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 174 (1433)
+.|++++++.++++.++.+...| +++|+|+||+|++. ..+...+||+.|.+.+........+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 35777777765555555555444 89999999999993 44666789999998876654333221 1233456789999
Q ss_pred eEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCCCHHHHH
Q 000541 175 VSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS-LRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETL 251 (1433)
Q Consensus 175 vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~-~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 251 (1433)
||+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 99999999999999999999999999999997432 125999999999875432 235699999999999999999999
Q ss_pred HHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchh
Q 000541 252 AFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGG 331 (1433)
Q Consensus 252 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGG 331 (1433)
.|+++++.+..+. ....+.+ ..+...+.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRP---DGVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCC---CCCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 9998876432110 0011111 0112346789999999999999999999999999
Q ss_pred HhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 000541 332 QKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQG 411 (1433)
Q Consensus 332 qrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 411 (1433)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987657788888888899999999999999999999999
Q ss_pred ChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCccccc--
Q 000541 412 PREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIPFDKR-- 489 (1433)
Q Consensus 412 ~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~~~~~-- 489 (1433)
+++++.+||+++||+||++.|+|||++++++++++ +++...+. ....++++++++|+.++.++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987643 23222111 123578999999999887766655543321110
Q ss_pred -------------cccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccc
Q 000541 490 -------------KSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSIT 556 (1433)
Q Consensus 490 -------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~ 556 (1433)
+..+.....+.|..++++|++.|++|+++.++||+..++.++++.+++|+++|++||+.+.+..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~--- 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS--- 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---
Confidence 0001122345688999999999999999999999999999999999999999999999875432
Q ss_pred cchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcccc
Q 000541 557 DGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPN 636 (1433)
Q Consensus 557 ~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 636 (1433)
+...+.|++||++++.++.++.++...+.+|++|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 34567899999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHH
Q 000541 637 VGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIV 716 (1433)
Q Consensus 637 ~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~ 716 (1433)
+++||.+++++++.+.++++++++++++++++.+|+.+++++++++++++||+++.++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccc---CCC---------------------CCCchHHHHhhc-cCcccccchhHHHHHHHHHHHHHHHHHH
Q 000541 717 VNEFLGNSWRKV---LPN---------------------TTEPLGVQVLKS-RGFFTDAYWYWLGLGALAGFILLFNFGF 771 (1433)
Q Consensus 717 ~nef~~~~~~~~---~~~---------------------~~~~~G~~~L~~-~~~~~~~~~~w~~~g~l~g~~i~f~~~~ 771 (1433)
+|||.+..+.|. +.+ .....|.++|+. +++. ..|.|++++++++++++|.+++
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~--~~~~w~n~gil~~~~v~f~~~~ 686 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYY--NSHKWRNFGIIIGFTVFFFFVY 686 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcc--cchhhHHHHHHHHHHHHHHHHH
Confidence 999999998884 110 123478899984 4554 4589999999999999999999
Q ss_pred HHHHHhcCCCCCcccccccccccc--------cccCCCCCccccccC--CCcchhhhhccccccCccccCCceeEEEece
Q 000541 772 TLALSFLNPFGKNQAVISQESQSN--------EHDNRTGGTIQLSTS--GRSKAEVKANHHKKRGMVLPFKPHSITFDEI 841 (1433)
Q Consensus 772 ~l~l~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 841 (1433)
++++++.++......+........ +.++...+.++.... .+...+.. ..........+.....++|+||
T Consensus 687 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~nl 765 (1394)
T TIGR00956 687 ILLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESD-DVNDEKDMEKESGEDIFHWRNL 765 (1394)
T ss_pred HHHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccc-cccccccccccCCCceEEEEee
Confidence 999999986554433322111000 000000111111100 00000000 0000000000011235899999
Q ss_pred eeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCccCCccccc
Q 000541 842 AYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYPKKQETFA 920 (1433)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~ 920 (1433)
+|.++.+ .+++.+|+|||+.++|||++||||||||||||||++|+|+.+++ +.+|+|.+||++... .++
T Consensus 766 ~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~ 835 (1394)
T TIGR00956 766 TYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQ 835 (1394)
T ss_pred EEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhh
Confidence 9987532 12457999999999999999999999999999999999998644 457999999998753 467
Q ss_pred ceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHH
Q 000541 921 RISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAV 1000 (1433)
Q Consensus 921 ~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~ 1000 (1433)
+.+|||+|+|.+++.+||+|+|.|++.+|.|.+.++++++++++++++.++|.+++|+.+|.++ .+|||||||||+||+
T Consensus 836 ~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqRl~Ia~ 914 (1394)
T TIGR00956 836 RSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKRLTIGV 914 (1394)
T ss_pred cceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhHHHHHH
Confidence 8899999999999999999999999999987766667777889999999999999999998765 389999999999999
Q ss_pred HHhhCCC-eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCcChhH
Q 000541 1001 ELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGRHSSH 1079 (1433)
Q Consensus 1001 ~L~~~p~-il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~~~~~ 1079 (1433)
||+.+|+ ||||||||||||+.++..|++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.++++++
T Consensus 915 aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~ 994 (1394)
T TIGR00956 915 ELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHT 994 (1394)
T ss_pred HHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccch
Confidence 9999997 999999999999999999999999999889999999999998788999999999988899999999988899
Q ss_pred HHHHHhhCCCccCCCCCCCcccceEEecCCcccccccccHHHHHHhcHHHHHHHHHHHhhcCCCCCCC---CCcCCCccc
Q 000541 1080 LIKYFEGIRGVSKIKDGYNPATWMLEVTAPSQETALGIDFADIYKSSELYRRNKALIKDISKPAPGSK---DLHFATQYA 1156 (1433)
Q Consensus 1080 ~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 1156 (1433)
+++||+++ |.++||+++|||||+||+++...+.....||.+.|++|+++++..+.++....+..... +....++|+
T Consensus 995 ~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1073 (1394)
T TIGR00956 995 IINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYA 1073 (1394)
T ss_pred HHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccC
Confidence 99999987 55679999999999999998655444456899999999998877666655443321111 111224689
Q ss_pred CcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000541 1157 QSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMGSMYTAVLFLGVQNAASVQP 1236 (1433)
Q Consensus 1157 ~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~ 1236 (1433)
.|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .+++|
T Consensus 1074 ~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~~~~~ 1149 (1394)
T TIGR00956 1074 ASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-QQYLP 1149 (1394)
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-HHhhh
Confidence 999999999999999999999999999999999999999999999986 47889999999999988877763 45668
Q ss_pred hHHhhhhHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhH-------HHHHHHHHHHHHHH
Q 000541 1237 VVSIERTVF-YRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAK-------FLWYQFFMFFTLLY 1308 (1433)
Q Consensus 1237 ~~~~er~v~-~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~-------f~~~~~~~~~~~~~ 1308 (1433)
.|..||.+| +||+++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+ |++|+++++++.++
T Consensus 1150 ~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~ 1229 (1394)
T TIGR00956 1150 PFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLY 1229 (1394)
T ss_pred hHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHH
Confidence 888888885 9999999999999999999999999999999999999999999988876 99999999999999
Q ss_pred HHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCCcccccCC----
Q 000541 1309 FTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGDIQDRLES---- 1384 (1433)
Q Consensus 1309 ~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~~---- 1384 (1433)
++++|+++++++|+.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.+
T Consensus 1230 ~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~ 1309 (1394)
T TIGR00956 1230 FSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELL 1309 (1394)
T ss_pred HHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999877742
Q ss_pred ------CCcHHHHH-------------------------------HhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 000541 1385 ------GETVEQFL-------------------------------RSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKV 1427 (1433)
Q Consensus 1385 ------~~~~~~~~-------------------------------~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1427 (1433)
|+||++|+ ...+|++.++.|+|++++++|++++ +++++++.+
T Consensus 1310 ~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~ 1388 (1394)
T TIGR00956 1310 TFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIATVFFYW 1388 (1394)
T ss_pred eecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHHHhhhe
Confidence 33554432 2256888899999999999999988 777777776
Q ss_pred h
Q 000541 1428 F 1428 (1433)
Q Consensus 1428 ~ 1428 (1433)
.
T Consensus 1389 ~ 1389 (1394)
T TIGR00956 1389 L 1389 (1394)
T ss_pred E
Confidence 5
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-95 Score=915.27 Aligned_cols=579 Identities=31% Similarity=0.558 Sum_probs=504.3
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEc
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMIS 910 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~ 910 (1433)
.+..+.|+|+++..+.+.. ..+++|+||||.++|||++|||||||||||||||+|+|+..++ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3467999999998764321 3478999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 911 GYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 911 G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
|++...+.+++.+|||+|||.++|++||+|+|.|+|.+|+|.+.++++++++|+++++.|||.+|+|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999998999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||||+||.+|+.||+||||||||||||+.++..+++.||++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 799999
Q ss_pred cCCCcChhHHHHHHhhCCCccCCCCCCCcccceEEecCCc-ccccccccHHHHHHhcHHHH--H-HHHHHHhhcCCCCCC
Q 000541 1071 GSLGRHSSHLIKYFEGIRGVSKIKDGYNPATWMLEVTAPS-QETALGIDFADIYKSSELYR--R-NKALIKDISKPAPGS 1146 (1433)
Q Consensus 1071 G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~-~~~~~~~d~~~~~~~s~~~~--~-~~~~~~~~~~~~~~~ 1146 (1433)
|+. +++++||+++| . +||+.+|||||.+|+.+.. ..+. -.+..+.++.-..++ . ..+............
T Consensus 253 G~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 68999999985 4 5999999999999998843 1110 011111111111000 0 000000011110011
Q ss_pred CCCcCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHH
Q 000541 1147 KDLHFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMGSMYTAVLFL 1226 (1433)
Q Consensus 1147 ~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~ 1226 (1433)
+.. +.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.+.++
T Consensus 326 ~~~--~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~~~~ 400 (613)
T KOG0061|consen 326 KKV--EIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFILSFM 400 (613)
T ss_pred ccc--ccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHHHHH
Confidence 111 111268999999999999999999999999999999999999999999999764 566679999999999888
Q ss_pred HHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhHHHHHHHHHHHHH
Q 000541 1227 GVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAKFLWYQFFMFFTL 1306 (1433)
Q Consensus 1227 ~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~ 1306 (1433)
.+..+...++.|+.||.+|.||+.+|+|+..+|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++++++..
T Consensus 401 ~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~ 480 (613)
T KOG0061|consen 401 TFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSS 480 (613)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 88888878899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCCcccccC---
Q 000541 1307 LYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGDIQDRLE--- 1383 (1433)
Q Consensus 1307 ~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~--- 1383 (1433)
+.++++|++++++.||...|..+++++...+++|+||+++.++||+||+|++|+|+++|+++|++.|||++....|.
T Consensus 481 ~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~ 560 (613)
T KOG0061|consen 481 LVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSG 560 (613)
T ss_pred HHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997333332
Q ss_pred ---CCCcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000541 1384 ---SGETVEQFLRSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKVFNFQK 1432 (1433)
Q Consensus 1384 ---~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1432 (1433)
+..+..+++. .++++.++.|.++.++++|.++|++++++++++....+
T Consensus 561 ~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 561 NLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred CCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1234556555 67999999999999999999999999999999865544
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.3e-94 Score=912.88 Aligned_cols=580 Identities=24% Similarity=0.400 Sum_probs=486.1
Q ss_pred CceeEEEeceeeEeecCccc----------------cCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhc
Q 000541 832 KPHSITFDEIAYSVDMPQEM----------------MRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 895 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~ 895 (1433)
.+.+++|.|++|.++..... ++.....+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 35789999999998654210 00011224567999999999999999999999999999999999
Q ss_pred CCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc
Q 000541 896 GRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL 975 (1433)
Q Consensus 896 g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~ 975 (1433)
|+.+++..+|+|.+||++.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.+++++.++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9976544689999999876532 345689999999999999999999999988877655566667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHh
Q 000541 976 RQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAF 1055 (1433)
Q Consensus 976 ~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~f 1055 (1433)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999999889999999999998889999
Q ss_pred cceeEEecCcEEEEEcCCCcChhHHHHHHhhCCCccCCCCCCCcccceEEecCCccccc---------ccccHHHHHHhc
Q 000541 1056 DELFLLKRGGQEIYVGSLGRHSSHLIKYFEGIRGVSKIKDGYNPATWMLEVTAPSQETA---------LGIDFADIYKSS 1126 (1433)
Q Consensus 1056 d~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~---------~~~d~~~~~~~s 1126 (1433)
|++++|.+ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+.. ......+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 899999997 68999999995 3 69999999999999987532110 001123344321
Q ss_pred HHHHHHHHHHHhh--cC-CCC-----CCCCC-cCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHH
Q 000541 1127 ELYRRNKALIKDI--SK-PAP-----GSKDL-HFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGT 1197 (1433)
Q Consensus 1127 ~~~~~~~~~~~~~--~~-~~~-----~~~~~-~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1197 (1433)
. .++.++..+.. .. +.. ..+.. .....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 00000 011235578999999999999988 99999999999999999999999
Q ss_pred HhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 000541 1198 MFWDMGTKTKKQQDLFNAMGSMYTAVLFLGVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVT 1277 (1433)
Q Consensus 1198 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~ 1277 (1433)
+||+++ ..+++++.|++|++++++++.+++.+++.|+.||+||+||+++|+|++.+|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999975 467899999999999998888888888999999999999999999999999999999999999999999
Q ss_pred hhhheecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhh
Q 000541 1278 YGVIVYAMIGFEWTAAKFLWYQFFMFFTLLYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWY 1357 (1433)
Q Consensus 1278 ~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~ 1357 (1433)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++|+.++|+.++++++.++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhcHHHHHHHHHHHHHhCCccc-----ccCCC-----CcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 000541 1358 YWACPVSWTLYGLVASQFGDIQD-----RLESG-----ETVEQFLRSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKV 1427 (1433)
Q Consensus 1358 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1427 (1433)
+|+||++|++++++.|||++... .|+.. ..| .++. ..++++...|.++++|++|+++|+++++++|++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~ 656 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASC-KFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRR 656 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCC-ccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987542 45321 112 2222 234445568999999999999999999999999
Q ss_pred hcc
Q 000541 1428 FNF 1430 (1433)
Q Consensus 1428 ~~~ 1430 (1433)
+||
T Consensus 657 ~~~ 659 (659)
T PLN03211 657 IKH 659 (659)
T ss_pred ccC
Confidence 886
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-94 Score=916.43 Aligned_cols=565 Identities=29% Similarity=0.485 Sum_probs=500.3
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYPKKQETFARISGYCEQNDIHSPNVT 937 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 937 (1433)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987643 358999999998765667788999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000541 938 VYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1016 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~-~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTs 1016 (1433)
|+|||.|++.++.|...+.+++++.++++++.+||.+++|+.+|+++ .++|||||||||+||+||+++|+||||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999988777777788889999999999999999999764 67899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCcChhHHHHHHhhCCCccCCCCC
Q 000541 1017 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGRHSSHLIKYFEGIRGVSKIKDG 1096 (1433)
Q Consensus 1017 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~ 1096 (1433)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|+|+. +++.+||+++| . +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g-~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG-H-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC-C-CCCCC
Confidence 9999999999999999998899999999999989999999999998 5899999997 67999999985 3 69999
Q ss_pred CCcccceEEecCCcccccc-----cccHHHHHHhcHHHHHHHHHHHhhcCCCC---CCCCCcCCCcccCcHHHHHHHHHH
Q 000541 1097 YNPATWMLEVTAPSQETAL-----GIDFADIYKSSELYRRNKALIKDISKPAP---GSKDLHFATQYAQSFFTQCMACLW 1168 (1433)
Q Consensus 1097 ~npad~~l~v~~~~~~~~~-----~~d~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~l~~ 1168 (1433)
.|||||++|+++...+... ..++.+.|++|+.+++..+.......+.+ ........++|..+|+.|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 9999999999875432211 13456677777766554443332211111 111111234678899999999999
Q ss_pred HhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHH
Q 000541 1169 KQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMGSMYTAVLFLGVQNAASVQPVVSIERTVFYRE 1248 (1433)
Q Consensus 1169 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE 1248 (1433)
|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++....+.++.||.+|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999986 46788999999999999998888778889999999999999
Q ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhHHH
Q 000541 1249 RAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAKFLWYQFFMFFTLLYFTYYGMMAVAMTPNHHISGI 1328 (1433)
Q Consensus 1249 ~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1328 (1433)
+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCCccc-ccCCC------CcHHHHHHhhhCCccc
Q 000541 1329 VAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGDIQD-RLESG------ETVEQFLRSFFGFKHD 1401 (1433)
Q Consensus 1329 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~-~~~~~------~~~~~~~~~~~g~~~~ 1401 (1433)
++++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|..+ +..++++.+.||++.+
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~ 585 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc
Confidence 9999999999999999999999999999999999999999999999998764 56421 1114666678999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000541 1402 FLGVVAAVVFAFPVLFALIFAVGIKVFNFQKR 1433 (1433)
Q Consensus 1402 ~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1433 (1433)
+.|.+++++++|.++|+++++++|++....+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999998776665
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.5e-91 Score=949.25 Aligned_cols=561 Identities=24% Similarity=0.406 Sum_probs=494.9
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--CeeeeEEEEcCccCCc--ccccceEEEeccCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYISGSIMISGYPKKQ--ETFARISGYCEQNDIHSP 934 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~ 934 (1433)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.|++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 446799999999999999999999999999999999998632 2469999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCC----CChhHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeE
Q 000541 935 NVTVYESLLYSAWLRLPLE----VDSPTRKM-FIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSII 1009 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr~~~~----~~~~~~~~-~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il 1009 (1433)
.+||+|+|.|++.+|.|.. .+.+++.+ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 9999999999998887642 23333333 357789999999999999999888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCcChhHHHHHHhhCC
Q 000541 1010 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGRHSSHLIKYFEGIR 1088 (1433)
Q Consensus 1010 ~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~ 1088 (1433)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|.+ |+++|+|+. +++++||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999875 999999999998899999999999986 899999997 68999999985
Q ss_pred CccCCCCCCCcccceEEecCCccc-------c---cccccHHHHHHhcHHHHHHHHHHHhhcCCC---------------
Q 000541 1089 GVSKIKDGYNPATWMLEVTAPSQE-------T---ALGIDFADIYKSSELYRRNKALIKDISKPA--------------- 1143 (1433)
Q Consensus 1089 g~~~~~~~~npad~~l~v~~~~~~-------~---~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1143 (1433)
. +||+++|||||++|+++++.+ . ....+|++.|++|+.+++..+.++......
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4 699999999999999875421 1 123479999999998887666554322110
Q ss_pred CCCCCCcCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHH
Q 000541 1144 PGSKDLHFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMGSMYTAV 1223 (1433)
Q Consensus 1144 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1223 (1433)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||+++++ +++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---chhHHHHHHHHHHHH
Confidence 00111122346889999999999999999999999999999999999999999999999864 578899999999999
Q ss_pred HHHHHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhHHHHHHHHHH
Q 000541 1224 LFLGVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAKFLWYQFFMF 1303 (1433)
Q Consensus 1224 ~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~ 1303 (1433)
+++++.++..+ +.+..||+||+||+.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99998887665 55667999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCCcccccC
Q 000541 1304 FTLLYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGDIQDRLE 1383 (1433)
Q Consensus 1304 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~ 1383 (1433)
++.++++++++++++++|+..+|+.++++++.++++|+||++|.++||+||+|++|+||++|+++|+++|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877763
Q ss_pred ----C---------------------C---CcHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000541 1384 ----S---------------------G---ETVEQFLRSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKVFNF 1430 (1433)
Q Consensus 1384 ----~---------------------~---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1430 (1433)
. | .++.+|+...|||+++|+|++++++++|+++|++++++++++++.
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1 145789998899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.4e-90 Score=929.63 Aligned_cols=562 Identities=24% Similarity=0.384 Sum_probs=484.9
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYPKKQETFARISGYCEQNDIHSPNVT 937 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 937 (1433)
.++.+|+||||.++|||+++|+|||||||||||++|+|+.++. ..+|+|.+||++......++.++||+|+|.|++.+|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 3567999999999999999999999999999999999997642 358999999998754444678999999999999999
Q ss_pred HHHHHHHHHHhcCCCC-------CChhHH------------------------HHHHHHHHHHcCCcccccccccCCCCC
Q 000541 938 VYESLLYSAWLRLPLE-------VDSPTR------------------------KMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~-------~~~~~~------------------------~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
|+|+|.|++.++.+.. ....++ +..++++++.+||.+++|+.+|+..++
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 9999999998764321 111111 123578999999999999999998889
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
+|||||||||+||++|+.+|++|||||||+|||+.++..+++.|+++++ .|+|||+++|||+.++++.||++++|.+ |
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G 414 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-G 414 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-c
Confidence 9999999999999999999999999999999999999999999999986 4899999999999899999999999985 8
Q ss_pred EEEEEcCCCcChhHHHHHHhhCCCccCCCCCCCcccceEEecCCccc-c-----------cccccHHHHHHhcHHHHHHH
Q 000541 1066 QEIYVGSLGRHSSHLIKYFEGIRGVSKIKDGYNPATWMLEVTAPSQE-T-----------ALGIDFADIYKSSELYRRNK 1133 (1433)
Q Consensus 1066 ~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~-~-----------~~~~d~~~~~~~s~~~~~~~ 1133 (1433)
+++|+||. +++.+||+++| . +||+++|||||++|+++..+. . ....++++.|++|+.+++..
T Consensus 415 ~ivy~G~~----~~~~~yF~~lG-f-~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 488 (1470)
T PLN03140 415 QIVYQGPR----DHILEFFESCG-F-KCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLE 488 (1470)
T ss_pred eEEEeCCH----HHHHHHHHHcC-C-CCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHH
Confidence 99999997 68999999995 4 699999999999999985332 1 11246899999998887655
Q ss_pred HHHHhhcCCCCCCCCCcCCCcccCcHHHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHH
Q 000541 1134 ALIKDISKPAPGSKDLHFATQYAQSFFTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLF 1213 (1433)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1213 (1433)
+.++.........+.....+.|..+++.|++.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~ 568 (1470)
T PLN03140 489 NELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGA 568 (1470)
T ss_pred HHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 44332111101111111234588999999999999999999999999999999999999999999999987654555667
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHhhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchh
Q 000541 1214 NAMGSMYTAVLFLGVQNAASVQPVVSIERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAA 1293 (1433)
Q Consensus 1214 ~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~ 1293 (1433)
.++|++|++++++.+.++.. ++.+..||+||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||+++++
T Consensus 569 ~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 569 LYIGALLFSMIINMFNGFAE-LALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 78899999998887766544 47788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHH
Q 000541 1294 KFLWYQFFMFFTLLYFTYYGMMAVAMTPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVAS 1373 (1433)
Q Consensus 1294 ~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~ 1373 (1433)
+||.|+++++++.++++++++++++++|+..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|+++|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCcccc---cC-CCC-cHHHHHHhhhCCccc--chhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000541 1374 QFGDIQDR---LE-SGE-TVEQFLRSFFGFKHD--FLGVVAAVVFAFPVLFALIFAVGIKVFN 1429 (1433)
Q Consensus 1374 ~~~~~~~~---~~-~~~-~~~~~~~~~~g~~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1429 (1433)
||.+.... |. ... ++.+|+ +.+||..+ +.|+++++|++|+++|.+++++++++++
T Consensus 728 Ef~~~~~~~~~~~~~~~~~G~~~L-~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 728 EMFAPRWMNKMASDNSTRLGTAVL-NIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred hccCccccCcccCCCCcccHHHHH-HhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99765432 11 112 445555 68899754 5699999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.1e-84 Score=809.83 Aligned_cols=563 Identities=26% Similarity=0.456 Sum_probs=501.0
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYPKKQETFARISGYCEQNDIHSPNVT 937 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 937 (1433)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3467999999999999999999999999999999999976532 236799999998776544788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CChhHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000541 938 VYESLLYSAWLRLPLE----VDSPTRK-MFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1012 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~----~~~~~~~-~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LD 1012 (1433)
|+|+|.|+++++.|.. .++.++. +..+.+++.+||.+|+|++||+..++|+||||||||+||.+++.+|+++|+|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998843 2222222 2577899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCcChhHHHHHHhhCCCcc
Q 000541 1013 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGRHSSHLIKYFEGIRGVS 1091 (1433)
Q Consensus 1013 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~ 1091 (1433)
|+|+|||+.++.++++.||++++. +.|+++++|||+.+++++||++++|.+ |++||+||. .++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 999999999999999999999865 899999999999999999999999996 899999998 68999999986 3
Q ss_pred CCCCCCCcccceEEecCCcccc-----------c-ccccHHHHHHhcHHHHHHHHHHHhhcCCCCCCCCCcCCCcccCcH
Q 000541 1092 KIKDGYNPATWMLEVTAPSQET-----------A-LGIDFADIYKSSELYRRNKALIKDISKPAPGSKDLHFATQYAQSF 1159 (1433)
Q Consensus 1092 ~~~~~~npad~~l~v~~~~~~~-----------~-~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1159 (1433)
+||+..++|||+.+|++...+. . .-.++++.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 1 114799999999999876554433222222233334456799999
Q ss_pred HHHHHHHHHHhhhhcccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Q 000541 1160 FTQCMACLWKQHWSYWRNPPYSAVRFLFTTIIALAFGTMFWDMGTKTKKQQDLFNAMGSMYTAVLFLGVQNAASVQPVVS 1239 (1433)
Q Consensus 1160 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1239 (1433)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..+..+..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 4567788999999999999888877766 5556
Q ss_pred hhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHhhhhheecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000541 1240 IERTVFYRERAAGMYSALPYAFAQALIEIPYIFVQSVTYGVIVYAMIGFEWTAAKFLWYQFFMFFTLLYFTYYGMMAVAM 1319 (1433)
Q Consensus 1240 ~er~v~~RE~~~~~Y~~~~y~~a~~~~e~P~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1319 (1433)
+.|+||+|+|...+|++++|.++..+.++|+.++.+++|.+|+||++||.++|++||.|+++++++..+++++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHHHHHhcccccCCCCCcchhhhhhhhcHHHHHHHHHHHHHhCCcccccC-CCC------------
Q 000541 1320 TPNHHISGIVAFAFYGLWNVFSGFIIPRTRIPIWWRWYYWACPVSWTLYGLVASQFGDIQDRLE-SGE------------ 1386 (1433)
Q Consensus 1320 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~isp~~y~~~~l~~~~~~~~~~~~~-~~~------------ 1386 (1433)
+|+...|+.++++.+....+++||+||.++||+||+|++|+||+.|+++++++|||++.+.+|. .|+
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988886 111
Q ss_pred ------------cHHHHHHhhhCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000541 1387 ------------TVEQFLRSFFGFKHDFLGVVAAVVFAFPVLFALIFAVGIKVFNFQ 1431 (1433)
Q Consensus 1387 ------------~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1431 (1433)
.+.+|++..|.|++.|.|++++|++||.++|.+++.+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 246788888999999999999999999999999999999999853
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-79 Score=769.49 Aligned_cols=584 Identities=31% Similarity=0.520 Sum_probs=491.3
Q ss_pred CceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHH
Q 000541 119 PTIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTL 198 (1433)
Q Consensus 119 p~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTL 198 (1433)
..++++|+|+++++... .+..+++|+||||.++|||++||+||+|||||||
T Consensus 22 ~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTL 72 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTTL 72 (613)
T ss_pred ccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHHH
Confidence 45789999999987532 1145789999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcC
Q 000541 199 LLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAG 278 (1433)
Q Consensus 199 L~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (1433)
|++|+|+......++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|+++-+.+ +++
T Consensus 73 L~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~------ 139 (613)
T KOG0061|consen 73 LNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSK------ 139 (613)
T ss_pred HHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCH------
Confidence 9999999987667899999999887777778899999999999999999999999999875421 222
Q ss_pred CCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCC
Q 000541 279 IKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGL 358 (1433)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgL 358 (1433)
++.+.++|.+++.|||.+|+||+||+...||+||||||||+||..|+.+|+|||+|||||||
T Consensus 140 ------------------~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSGL 201 (613)
T KOG0061|consen 140 ------------------EEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSGL 201 (613)
T ss_pred ------------------HHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCCc
Confidence 22346789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHH
Q 000541 359 DSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQ 438 (1433)
Q Consensus 359 D~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 438 (1433)
|+.++.++++.|+++|+. |+|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+.
T Consensus 202 DS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~l 280 (613)
T KOG0061|consen 202 DSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFLL 280 (613)
T ss_pred chhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHHH
Confidence 999999999999999986 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHH
Q 000541 439 EVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELL 518 (1433)
Q Consensus 439 evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~ 518 (1433)
++.+..+..+..... .......+.++..+...+......... . +..........++|.|+..+.+|.+.
T Consensus 281 ~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~s~~~q~~~L~~R~~~ 349 (613)
T KOG0061|consen 281 DLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSL----S-TSKKVEIGTSPSWWTQFKILLKRSLK 349 (613)
T ss_pred HHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhc----c-cccccccccCCcHHHHHHHHHHHHhH
Confidence 988743110000000 000000011100000000000000000 0 00000011167899999999999999
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHHHHHHHHHHHHHHhh-hHHHhhhcchhhHhhhcCC
Q 000541 519 LMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGALFFIVLMIMFNGMA-EIPMTIAKLPIFYKQRDLR 597 (1433)
Q Consensus 519 ~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~il~~~~~~~~-e~~~~~~~~~vf~kqr~~~ 597 (1433)
.+.|++..+..|..+.+++++++|++||+.+.++.. .....|++||.+.+..+..+. .+.....++++|.||+..+
T Consensus 350 ~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~ 426 (613)
T KOG0061|consen 350 NIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSSG 426 (613)
T ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhcC
Confidence 999999999999999999999999999998654433 235678888888888776666 5778889999999999999
Q ss_pred cccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHH
Q 000541 598 FYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSF 677 (1433)
Q Consensus 598 ~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~ 677 (1433)
+|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.++.++...++.++..+++++.++...|.+++++
T Consensus 427 ~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~ 506 (613)
T KOG0061|consen 427 LYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGPV 506 (613)
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCcccccCC--CCCCchHHHHhhccCcccccchhHH
Q 000541 678 ALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNSWRKVLP--NTTEPLGVQVLKSRGFFTDAYWYWL 755 (1433)
Q Consensus 678 ~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~L~~~~~~~~~~~~w~ 755 (1433)
+++.+++++||+++.+.+|.||.|+.|+|+..|+++++++|||.+....|... ..+...|..+++..++...+ .|.
T Consensus 507 ~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~ 584 (613)
T KOG0061|consen 507 LLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--FWL 584 (613)
T ss_pred HHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--cch
Confidence 99999999999999999999999999999999999999999999744444333 34567789999999987664 588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Q 000541 756 GLGALAGFILLFNFGFTLALSFLN 779 (1433)
Q Consensus 756 ~~g~l~g~~i~f~~~~~l~l~~l~ 779 (1433)
++.++++++++|.++.++++++..
T Consensus 585 ~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 585 DLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999988753
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=2.5e-79 Score=777.54 Aligned_cols=569 Identities=25% Similarity=0.423 Sum_probs=479.9
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCC
Q 000541 166 KKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 166 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 245 (1433)
++++++|+|+|+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44577999999999999999999999999999999999998875556899999999876544567899999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc-
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM- 324 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~- 324 (1433)
||+|||.|+++++.+.. ..+. +....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~-------~~~~------------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRR-------VTKK------------------------EKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCC-------CCHH------------------------HHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999988753211 1111 122346789999999999999999864
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999876 4778888888888999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|+++|+|+++++.+||+++||+||++.|++||+.++++..+..+. . ...+.+++.+.|+.+...++..++...
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999999865432110 0 012234566666665544443322221
Q ss_pred ccccc---cccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhh
Q 000541 485 PFDKR---KSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIY 561 (1433)
Q Consensus 485 ~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~ 561 (1433)
..... ...........+..+++.|+..+++|.++..+||+..+..++++.+++|+++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 11000 000011122456788999999999999999999999999999999999999999999976543 234456
Q ss_pred hHHHHHHHHHHHHHHhhh-HHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHH
Q 000541 562 TGALFFIVLMIMFNGMAE-IPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRL 640 (1433)
Q Consensus 562 ~g~lff~il~~~~~~~~e-~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 640 (1433)
.|++|+.++..+|.++.+ +.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 788999988888876544 4556679999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhh
Q 000541 641 FRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEF 720 (1433)
Q Consensus 641 f~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef 720 (1433)
|.++++++++..++.+++.++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCCC---CCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000541 721 LGNSW-RKVLPNT---TEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFL 778 (1433)
Q Consensus 721 ~~~~~-~~~~~~~---~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l 778 (1433)
.+..+ .|...+. +...|..+++.+|+... +.|.+++++++++++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 4432111 23458999999998765 459999999999999999999999864
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2e-78 Score=767.58 Aligned_cols=609 Identities=22% Similarity=0.355 Sum_probs=468.8
Q ss_pred CCceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHH
Q 000541 118 LPTIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTT 197 (1433)
Q Consensus 118 ~p~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKST 197 (1433)
.+.++++|.|+++.+.......+... ..+.....- ......++.+++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~-~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKP-KISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccc-ccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 35789999999999753310111110 111000000 0111222344578999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhc
Q 000541 198 LLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAA 277 (1433)
Q Consensus 198 LL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 277 (1433)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.... ..+.
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~---- 176 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQ---- 176 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHH----
Confidence 999999998764 3589999999987542 23569999999999999999999999876542110 0110
Q ss_pred CCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCC
Q 000541 278 GIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTG 357 (1433)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsg 357 (1433)
+....++.+++.+||++++||.||++..++|||||||||+||++|+.+|+++||||||+|
T Consensus 177 --------------------~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 177 --------------------EKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred --------------------HHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 112346779999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHH
Q 000541 358 LDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFL 437 (1433)
Q Consensus 358 LD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 437 (1433)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 4677777777777789999999999999999999999999999999999999999999999
Q ss_pred HhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC---cccccc-----cccc-ccccCccCCCHHHH
Q 000541 438 QEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI---PFDKRK-----SHRA-ALTTKIYGVSKKEL 508 (1433)
Q Consensus 438 ~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~~ 508 (1433)
.++++...+.+.....+.+ ...+++.+.|+... .++..++... +....+ ..+. ......+..+++.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 11233444443211 1111111100 000000 0000 00112245678999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHHHHHHHHHHHH-HHhhhHHHhhhcc
Q 000541 509 LKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGALFFIVLMIMF-NGMAEIPMTIAKL 587 (1433)
Q Consensus 509 ~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~il~~~~-~~~~e~~~~~~~~ 587 (1433)
+..+++|+++. +|+......|+++.+++|+++|++||+.+ ..+...+.|++||++++.++ ..+..+.....++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78877778999999999999999999874 12345678999999877665 4567777778899
Q ss_pred hhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000541 588 PIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLFLNQMASALFRLIAATGRN 667 (1433)
Q Consensus 588 ~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~ 667 (1433)
++|+|||..++|++++|++++++.++|+.++.+++|++++|||+|+.+++++||.+++++++...++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCcc-----cccCCCCCCchHHHHhh
Q 000541 668 IVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNSW-----RKVLPNTTEPLGVQVLK 742 (1433)
Q Consensus 668 ~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~L~ 742 (1433)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 34221100001111222
Q ss_pred ccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000541 743 SRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLN 779 (1433)
Q Consensus 743 ~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~ 779 (1433)
...+. ....|.+++++++++++|.++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 224688999999999999999999987653
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.4e-71 Score=697.47 Aligned_cols=771 Identities=20% Similarity=0.263 Sum_probs=414.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 244 (1433)
+..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|.++.++.. +.++|.|+|+|.+| .
T Consensus 365 dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF-~ 440 (1228)
T KOG0055|consen 365 DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLF-A 440 (1228)
T ss_pred cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhh-c
Confidence 567999999999999999999999999999999999999998 9999999999987764 46899999999655 6
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||+|||.|+.. |...+...+|+. .....+.+. .|++..||.||+++
T Consensus 441 ~tI~eNI~~G~~-------------------------dat~~~i~~a~k-----~ana~~fi~---~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 441 TTIRENIRYGKP-------------------------DATREEIEEAAK-----AANAHDFIL---KLPDGYDTLVGERG 487 (1228)
T ss_pred ccHHHHHhcCCC-------------------------cccHHHHHHHHH-----HccHHHHHH---hhHHhhcccccCCC
Confidence 799999999732 111222222221 111233333 38899999999988
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.. |||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++.. .++|||+ +.|....+-+ +|+|++|++
T Consensus 488 ~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~I~v~~~ 562 (1228)
T KOG0055|consen 488 VQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADKIAVMEE 562 (1228)
T ss_pred CC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCEEEEEEC
Confidence 74 99999999999999999999999999999999999999999999864 4667766 7788877777 999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHH--HhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhh--
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFL--QEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGD-- 480 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl--~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~-- 480 (1433)
|+|++.|+++|+... ..-.++.+ |+....++. ..+.. .. .++.....+.+........
T Consensus 563 G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~~~--~~-----~~~~~~s~~~s~~~~~~~~~~ 624 (1228)
T KOG0055|consen 563 GKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEEEE--SL-----KEERSRSLKSSSSSPSLSRGS 624 (1228)
T ss_pred CEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-ccccc--ch-----hhhhhhccccccccccccCCc
Confidence 999999999999862 11122221 222221111 00000 00 0000000000000000000
Q ss_pred ----hh-cCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHh---cccCCCC
Q 000541 481 ----EL-RIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLF---FRTKMHR 552 (1433)
Q Consensus 481 ----~l-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf---~~~~~~~ 552 (1433)
.. ..+.++....+ ........++++.++.+. .+|....-.......+.....+.+++.+.++ +..+.+
T Consensus 625 ~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~~i~k~~~-pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~- 700 (1228)
T KOG0055|consen 625 NRSNLLSVKPEGEDPEEP--VSEEDEKVSFWRIFKLNK-PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDD- 700 (1228)
T ss_pred cccccccccccccccccc--cccccccccHHHHHHhcc-chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChH-
Confidence 00 00000000000 011112334444443321 1222221122222222333334455554433 222211
Q ss_pred CccccchhhhHHHHHHHH----------HHHHHHhhhHHHhhhcchhhHh--hhcCCcccchhHHHHHHHH----Hhh--
Q 000541 553 DSITDGVIYTGALFFIVL----------MIMFNGMAEIPMTIAKLPIFYK--QRDLRFYPSWAYALSTWIL----KIP-- 614 (1433)
Q Consensus 553 ~~~~~~~~~~g~lff~il----------~~~~~~~~e~~~~~~~~~vf~k--qr~~~~y~~~ay~la~~l~----~iP-- 614 (1433)
..........++|..+. ..+|.-++|.....-+...|.+ ..+..||---... +.... +.|
T Consensus 701 -~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~v 778 (1228)
T KOG0055|consen 701 -ELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNV 778 (1228)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHH
Confidence 11111111222222211 1222333333333233333332 1233444322111 21111 111
Q ss_pred -------HHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHH-------HHHHHHHHHHHHHHhcCchH---------HH
Q 000541 615 -------ISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLF-------LNQMASALFRLIAATGRNIV---------VA 671 (1433)
Q Consensus 615 -------~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l-------~~~~~~~lf~~i~a~~~~~~---------~a 671 (1433)
++.+-..+-.+++-..++ |..-|-+.++ +........+++........ ..
T Consensus 779 r~~v~~rl~~vv~~~~~~~~~iiia-------f~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~ 851 (1228)
T KOG0055|consen 779 RAAVGDRLSLVVQNIAAVIIGIIIA-------FIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAI 851 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 111110111111111111 1111100000 00000000111111111000 00
Q ss_pred HHhHHHHHHHHHHHhccccc--ccchhhh---HHHHHhHChHHHHHHHHHHHhhcCCcccccCCCCCCchHHHHhhccCc
Q 000541 672 NTFGSFALLLLFVLGGFVLS--REDIKKW---WIWAYWCSPLMYAQNAIVVNEFLGNSWRKVLPNTTEPLGVQVLKSRGF 746 (1433)
Q Consensus 672 ~~~~~~~~~~~~l~~Gf~i~--~~~i~~~---~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~ 746 (1433)
-.+..+=.+-.+..--.++. .+...+. ..+-.+++-+.|++...+.---... +...|...+..-..
T Consensus 852 eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~---------~f~~G~~Li~~g~~ 922 (1228)
T KOG0055|consen 852 EAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYAL---------SFWYGARLISNGEM 922 (1228)
T ss_pred HHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhHHHHhcCCc
Confidence 01111100000000000000 0000000 1111222222222211110000000 00011111111000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCcccccccc-cccccccCCCCCccccccCCCcchhhhhccccc
Q 000541 747 FTDAYWYWLGLGALAGFILLFNFG-FTLALSFLNPFGKNQAVISQE-SQSNEHDNRTGGTIQLSTSGRSKAEVKANHHKK 824 (1433)
Q Consensus 747 ~~~~~~~w~~~g~l~g~~i~f~~~-~~l~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 824 (1433)
..... +.+...+.|... ..-+..|.....+.+...... ..-++ .+ ..+.. ..
T Consensus 923 ~~~~~-------~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr----------~~-----~i~~~----~~ 976 (1228)
T KOG0055|consen 923 TFEDV-------FRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDR----------KP-----TIDPD----ST 976 (1228)
T ss_pred CHHHH-------HHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcC----------CC-----CCCCC----CC
Confidence 00000 000001111110 111122221111111000000 00000 00 00000 00
Q ss_pred cCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeee
Q 000541 825 RGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIS 904 (1433)
Q Consensus 825 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~ 904 (1433)
.+...|.-...++|+||+|+|+.. ++.+||+|+|+++++|+.+||+|||||||||.+.+|-...+ +..
T Consensus 977 ~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~ 1044 (1228)
T KOG0055|consen 977 SGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDA 1044 (1228)
T ss_pred CCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 111122233569999999999754 34679999999999999999999999999999999988776 679
Q ss_pred eEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHH-------cCCcc
Q 000541 905 GSIMISGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMEL-------VELNP 974 (1433)
Q Consensus 905 G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~-------l~l~~ 974 (1433)
|.|.|||++++. ..+|+.+|.|.|+|.+|. -|++||+.|+. . +.+.++ +.+.++. .+|.+
T Consensus 1045 G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-~----~vs~~e----Ii~Aak~ANaH~FI~sLP~ 1114 (1228)
T KOG0055|consen 1045 GKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-E----EVSEEE----IIEAAKLANAHNFISSLPQ 1114 (1228)
T ss_pred CeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-C----CCCHHH----HHHHHHHhhhHHHHhcCcC
Confidence 999999998765 356788999999999875 59999999981 1 122222 2222222 34566
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH
Q 000541 975 LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEA 1054 (1433)
Q Consensus 975 ~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~ 1054 (1433)
-.|+.+|..|. .||||||||++||||+++||+||+|||.||.||+++.+.|+++|.+.. .|||.|+++|++| ....
T Consensus 1115 GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--TIqn 1190 (1228)
T KOG0055|consen 1115 GYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--TIQN 1190 (1228)
T ss_pred cccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--hhhc
Confidence 67889988764 799999999999999999999999999999999999999999999864 6899999999875 5788
Q ss_pred hcceeEEecCcEEEEEcCC
Q 000541 1055 FDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1055 fd~~~ll~~gG~~~y~G~~ 1073 (1433)
+|.|.++++ |+++..|+-
T Consensus 1191 aD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1191 ADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred CCEEEEEEC-CEEEecccH
Confidence 999999985 899999985
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.7e-70 Score=734.42 Aligned_cols=224 Identities=26% Similarity=0.393 Sum_probs=191.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|+++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 5899999988741 12569999999999999999999999999999999999987 4689999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 915 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
.. ...++.+|||+|++.+++.+||+|+|.+.+.++. .+.++.++.++++++.++|.+.+|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998777652 233444566889999999998888775 4799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
||||+||+||+.+|+||||||||+|||+.++..+++.|++++++|+|||+|+|+++ ++...+|++++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999888999999999864 56677999999985 89999998
Q ss_pred CCcChhHHHHHHh
Q 000541 1073 LGRHSSHLIKYFE 1085 (1433)
Q Consensus 1073 ~~~~~~~~~~yF~ 1085 (1433)
. +++...|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 7 45555443
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-70 Score=705.29 Aligned_cols=766 Identities=20% Similarity=0.251 Sum_probs=419.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
...|+|||+.|++|++++|+||.||||||||.+|.|+++.. +|+|.++| .++||||.+ |+.+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-WI~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-WIQNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-HhhCCcHH
Confidence 33799999999999999999999999999999999999875 99999999 599999998 56678999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
|||.|+..+. .+++.+.-++|.+++|-+ -|+.+..|.||++++ +|
T Consensus 600 eNILFG~~~d--------~~rY~~Vi~aC~L~~Dle--------------------------~Lp~GD~TeIGErGi-nL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--------EERYDKVIKACALKKDLE--------------------------ILPFGDLTEIGERGI-NL 644 (1381)
T ss_pred HhhhcCcccc--------HHHHHHHHHHccCHhHHh--------------------------hcCCCCcceecCCcc-CC
Confidence 9999986542 122334445565554321 278889999999998 59
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIV 408 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 408 (1433)
|||||||+++|||++++++|++||+|.|++|+++..+|++.+-.. .++++|+|.++| .-+..+.+|.|++|++|+|.
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~--~L~~KT~ILVTH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRG--LLRGKTVILVTH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHh--hhcCCEEEEEeC-chhhhhhCCEEEEecCCeEe
Confidence 999999999999999999999999999999999999999776632 355677777777 56788899999999999999
Q ss_pred EecChhHHHH---HHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCc
Q 000541 409 YQGPREHVLE---FFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIP 485 (1433)
Q Consensus 409 ~~G~~~~~~~---~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~ 485 (1433)
..|+.+|+.+ .|+.+ +.+....++.. .....+.......+. +. +.........+. ...
T Consensus 722 ~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~ 782 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-------------AHEEESEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-SKD 782 (1381)
T ss_pred cccCHHHHHhcchhHHHH-------------hhccchhhccc---cccccccccccccch-hh-hhhhhhcccccc-ccc
Confidence 9999999984 23322 00000000000 000000000000000 00 000000000000 000
Q ss_pred cccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHH-HHHHHHHHHHHHHHHHhcccCCCCCc---c---ccc
Q 000541 486 FDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYI-FKLCQLTIMGLVAMTLFFRTKMHRDS---I---TDG 558 (1433)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~-~~~~~~~i~ali~gtlf~~~~~~~~~---~---~~~ 558 (1433)
..+.+...........+.-.|...+ .+........... +-+.......+.+++-||-..+.... . .+.
T Consensus 783 ~~~~~~~~~~~ee~~~G~v~~~vY~-----~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~ 857 (1381)
T KOG0054|consen 783 EKEEEDKLVQEEERETGKVSWSVYK-----KYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVST 857 (1381)
T ss_pred ccchhhHHHHHHHHhcCEeeHHHHH-----HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCc
Confidence 0000000000000011111111111 1111101111111 11112222222333333322221111 1 111
Q ss_pred hh----hhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCcc
Q 000541 559 VI----YTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFD 634 (1433)
Q Consensus 559 ~~----~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~ 634 (1433)
.. |..+.+..+++..+.++.-....+..-..+ .-.+-.-+.+.|++|++.+
T Consensus 858 ~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~L------------h~~ml~~Ilrapm~FFdtT------------- 912 (1381)
T KOG0054|consen 858 SFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKL------------HDKLLNSILRAPMSFFDTT------------- 912 (1381)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHhCcchhcCCC-------------
Confidence 11 222222222222222221111111100000 1123344566677775433
Q ss_pred ccHhHHHHHH---------HHHHHHHHHHHHHHHHHHHh----cCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHH
Q 000541 635 PNVGRLFRQY---------LLLLFLNQMASALFRLIAAT----GRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIW 701 (1433)
Q Consensus 635 ~~~~~ff~~~---------ll~~l~~~~~~~lf~~i~a~----~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W 701 (1433)
..||.+.+| .+.+.+..+...+..+++.+ ..++.+...+.++.++.+++..-|.-..+++++ .=
T Consensus 913 -P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR--Le 989 (1381)
T KOG0054|consen 913 -PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR--LE 989 (1381)
T ss_pred -CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--hh
Confidence 356666554 22333333333333222222 112222222222222222222222222222221 01
Q ss_pred HHhHChHHHHHHHHHHHhhcCCcccccCCCCCCchHHHHhhccCc--------ccccchhHHHHHHHHHHHHHHHHHHHH
Q 000541 702 AYWCSPLMYAQNAIVVNEFLGNSWRKVLPNTTEPLGVQVLKSRGF--------FTDAYWYWLGLGALAGFILLFNFGFTL 773 (1433)
Q Consensus 702 ~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~--------~~~~~~~w~~~g~l~g~~i~f~~~~~l 773 (1433)
..--||+.-.+...+.---.-+.+ +.....-.......+. .....|.-+.+-.+..+++++..++.+
T Consensus 990 sitRSPi~sh~~Etl~GlsTIRAf-----~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~v 1064 (1381)
T KOG0054|consen 990 SITRSPIYSHFSETLQGLSTIRAF-----GKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAV 1064 (1381)
T ss_pred hcccchHHHhHHHHhcCcceeeec-----cccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111244443332211100000000 0000000001100010 011123333333333333322222221
Q ss_pred HHHhcCC--CCCccccccc-----------ccccccccCCCCCccccccCCCcchhhhhcc-ccccCccccCCceeEEEe
Q 000541 774 ALSFLNP--FGKNQAVISQ-----------ESQSNEHDNRTGGTIQLSTSGRSKAEVKANH-HKKRGMVLPFKPHSITFD 839 (1433)
Q Consensus 774 ~l~~l~~--~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 839 (1433)
. ..... .+..+-.+++ .....+.++.+.+++|..++...+.+..... ..+.+..+|. ...++|+
T Consensus 1065 l-~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~-~G~I~f~ 1142 (1381)
T KOG0054|consen 1065 L-LPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPS-KGEIEFE 1142 (1381)
T ss_pred H-ccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCC-CCeEEEE
Confidence 1 11110 1111111111 1112223344445554433322111211111 1112223332 2479999
Q ss_pred ceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc---
Q 000541 840 EIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ--- 916 (1433)
Q Consensus 840 ~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--- 916 (1433)
|++.+|.. +-..+|||||+.|+|||.+||+|++|||||||+++|.+... +.+|+|.|||.++.+
T Consensus 1143 ~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL 1209 (1381)
T KOG0054|consen 1143 DLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGL 1209 (1381)
T ss_pred EeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccH
Confidence 99877742 12369999999999999999999999999999999999877 568999999998766
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccc-------ccccCCCCCCCC
Q 000541 917 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQ-------ALVGLPGVSGLS 989 (1433)
Q Consensus 917 ~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~-------~~vg~~~~~~LS 989 (1433)
.++|+.++.+|||+.+|.. |||+||. | ..+..++.+.++||..+|.+.-. ..+. +++.++|
T Consensus 1210 ~dLRsrlsIIPQdPvLFsG-TvR~NLD-------P---f~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~-egG~N~S 1277 (1381)
T KOG0054|consen 1210 HDLRSRLSIIPQDPVLFSG-TVRFNLD-------P---FDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVS-EGGENFS 1277 (1381)
T ss_pred HHHHhcCeeeCCCCceecC-ccccccC-------c---ccccCHHHHHHHHHHhChHHHHhhCCcCCCceec-CCCccCC
Confidence 4578889999999998764 8888872 2 22333444566666666654332 2222 2457899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
.||||.+|+||||+++++||+|||+|+++|++|...|+++||+-.+ ++|||++.|+.+ ....+|+|+||++ |+++.
T Consensus 1278 vGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld~-G~v~E 1353 (1381)
T KOG0054|consen 1278 VGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA-GRVVE 1353 (1381)
T ss_pred hHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEeeC-CeEee
Confidence 9999999999999999999999999999999999999999998764 799999999865 5667899999996 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
+|++.
T Consensus 1354 fdsP~ 1358 (1381)
T KOG0054|consen 1354 FDSPA 1358 (1381)
T ss_pred cCChH
Confidence 99983
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.3e-66 Score=704.74 Aligned_cols=211 Identities=23% Similarity=0.327 Sum_probs=176.9
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+++|+. +...+|+|+|++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 36999999999841 12359999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+|+.++||||++.++.. |+||||.+.. ..+ ++.+.++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4567889999999998875 9999996431 111 2345666776666432 35556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999975 4899999999864 5677999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.8e-65 Score=700.53 Aligned_cols=211 Identities=23% Similarity=0.309 Sum_probs=176.9
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+++|+. +.+.+|+|+|++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 36999999999841 12359999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+++.++||||++.+++. |++|||.+.. +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4567889999999988875 9999996421 112 2345667777766543 25556654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRL--NTIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCH--HHHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 479999999986 45677999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999986
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=6.1e-65 Score=604.95 Aligned_cols=474 Identities=26% Similarity=0.341 Sum_probs=365.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCcceEEEECCccCCCCcc-------cceEEEEcCCC-
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS-LRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD- 239 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 239 (1433)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999876 4568999999997654432 25799999994
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 240 -NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 240 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
.+-|-+||.+.|.-..+..+... ..++...+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 55677999999887665543211 11233446678999999987654
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
+++.+.|||||||||.||+||+.+|++|++|||||+||..++.+|++.|+++.+. .+++++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 6788899999999999999999999999999999999999999999999999864 578888899999999999999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhh
Q 000541 399 IILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKV 478 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~ 478 (1433)
|+||++|++++.|+++++.+. |. .||. +.+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT-----------------~~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYT-----------------RGL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------Cccc-----------------HHH
Confidence 999999999999999998641 10 0110 000
Q ss_pred hhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 000541 479 GDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDG 558 (1433)
Q Consensus 479 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~ 558 (1433)
...
T Consensus 255 l~a----------------------------------------------------------------------------- 257 (539)
T COG1123 255 LAA----------------------------------------------------------------------------- 257 (539)
T ss_pred Hhh-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHh
Q 000541 559 VIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVG 638 (1433)
Q Consensus 559 ~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 638 (1433)
.|....
T Consensus 258 ----------------------------~p~~~~---------------------------------------------- 263 (539)
T COG1123 258 ----------------------------VPRLGD---------------------------------------------- 263 (539)
T ss_pred ----------------------------CCCccc----------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHH
Q 000541 639 RLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVN 718 (1433)
Q Consensus 639 ~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~n 718 (1433)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccccccc
Q 000541 719 EFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHD 798 (1433)
Q Consensus 719 ef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 798 (1433)
.....
T Consensus 264 ------~~~~~--------------------------------------------------------------------- 268 (539)
T COG1123 264 ------EKIIR--------------------------------------------------------------------- 268 (539)
T ss_pred ------ccccc---------------------------------------------------------------------
Confidence 00000
Q ss_pred CCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEE
Q 000541 799 NRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTA 878 (1433)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 878 (1433)
... ... .+ ...-++++|++..+..+.... ....+...+++||||.+++||++|
T Consensus 269 --------~~~------~~~----------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lg 321 (539)
T COG1123 269 --------LPR------RGP----------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLG 321 (539)
T ss_pred --------ccc------ccc----------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEE
Confidence 000 000 00 012366777776665432111 001234679999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCC
Q 000541 879 LMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK--KQ---ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLP 951 (1433)
Q Consensus 879 i~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~--~~---~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~ 951 (1433)
|+|+||||||||.++|+|+.+ +.+|+|.++|.+. +. ...++.+-+++||+ .+.|.+||++.+.-......+
T Consensus 322 lVGeSGsGKSTlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~ 399 (539)
T COG1123 322 LVGESGSGKSTLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG 399 (539)
T ss_pred EECCCCCCHHHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc
Confidence 999999999999999999988 4689999999762 11 22345666777775 578999999999766544332
Q ss_pred CCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHH
Q 000541 952 LEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1030 (1433)
Q Consensus 952 ~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l 1030 (1433)
. ...++++++.++++.++|.+ ..++. ...||||||||++|||||+.+|++|++|||||.||+..+..|.++|
T Consensus 400 ~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl 472 (539)
T COG1123 400 G--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLL 472 (539)
T ss_pred c--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHH
Confidence 2 24566678999999999985 34433 3579999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1031 RNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1031 ~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
+++.++ |.|.|+++||.+ -+-..+|++++|.+ |++|..||.
T Consensus 473 ~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 473 KDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999876 999999999864 35567899999985 899999975
No 19
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-64 Score=624.75 Aligned_cols=460 Identities=21% Similarity=0.310 Sum_probs=350.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+.+|+|||+++++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 46999999999999999999999999999999999999861 128999999998764432 3569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++......+. ... .+....++.+++.+||++..+..++
T Consensus 97 ~tv~e~l~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-------MDY------------------------DAMYLRAQKLLAQLKLDINPATPVG--- 142 (506)
T ss_pred CcHHHHhhhcccccccCC-------cCH------------------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999998653210000 000 0011235668999999877776665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++++ .+++|++++|+..++.++||+|++|++
T Consensus 143 --~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 143 --NLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA--HGIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999854 356777799999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|++++.|+.+++.. .+..+
T Consensus 219 G~i~~~~~~~~~~~--------------------------------------------~~~~~----------------- 237 (506)
T PRK13549 219 GRHIGTRPAAGMTE--------------------------------------------DDIIT----------------- 237 (506)
T ss_pred CEEeeecccccCCH--------------------------------------------HHHHH-----------------
Confidence 99998886433200 00000
Q ss_pred ccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHH
Q 000541 485 PFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGA 564 (1433)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~ 564 (1433)
+ +. + ..
T Consensus 238 ------------------------------~-----------------------------~~--~--~~----------- 243 (506)
T PRK13549 238 ------------------------------M-----------------------------MV--G--RE----------- 243 (506)
T ss_pred ------------------------------H-----------------------------hh--C--cC-----------
Confidence 0 00 0 00
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHH
Q 000541 565 LFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQY 644 (1433)
Q Consensus 565 lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 644 (1433)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCc
Q 000541 645 LLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNS 724 (1433)
Q Consensus 645 ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~ 724 (1433)
.+.
T Consensus 244 --------------------------------------------------~~~--------------------------- 246 (506)
T PRK13549 244 --------------------------------------------------LTA--------------------------- 246 (506)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCc
Q 000541 725 WRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGT 804 (1433)
Q Consensus 725 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1433)
.. + .
T Consensus 247 ----------------------------------------------------~~-~----------~------------- 250 (506)
T PRK13549 247 ----------------------------------------------------LY-P----------R------------- 250 (506)
T ss_pred ----------------------------------------------------cc-c----------c-------------
Confidence 00 0 0
Q ss_pred cccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCC
Q 000541 805 IQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSG 884 (1433)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sG 884 (1433)
. . . .. ...-++++|+++.++. .+++.+|+|+|+++++||++||+||||
T Consensus 251 -------~---~---~-~~--------~~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~NG 298 (506)
T PRK13549 251 -------E---P---H-TI--------GEVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGLVG 298 (506)
T ss_pred -------c---c---c-CC--------CCceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCCCC
Confidence 0 0 0 00 0012667787765521 012358999999999999999999999
Q ss_pred CChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCC--CCC
Q 000541 885 AGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQND---IHSPNVTVYESLLYSAWLRLPL--EVD 955 (1433)
Q Consensus 885 aGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~--~~~ 955 (1433)
||||||+++|+|..++ +.+|+|.++|.++... ..++.++|++|+. .+++.+||.|++.+....+... ..+
T Consensus 299 sGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 377 (506)
T PRK13549 299 AGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRID 377 (506)
T ss_pred CCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccC
Confidence 9999999999998752 2589999999875321 1245689999985 4678899999998753211110 012
Q ss_pred hhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000541 956 SPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV 1034 (1433)
Q Consensus 956 ~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~ 1034 (1433)
....++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++
T Consensus 378 ~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~ 452 (506)
T PRK13549 378 DAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLV 452 (506)
T ss_pred hHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHH
Confidence 233345688999999996 4566553 4799999999999999999999999999999999999999999999998
Q ss_pred hCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCc
Q 000541 1035 DTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGR 1075 (1433)
Q Consensus 1035 ~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~ 1075 (1433)
++|+|||+++|+++ ++.+.+|++++|.+ |+++..|+...
T Consensus 453 ~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 453 QQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 88999999999975 56778999999985 89999887654
No 20
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.4e-63 Score=669.63 Aligned_cols=217 Identities=19% Similarity=0.332 Sum_probs=178.5
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC------------
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 901 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~------------ 901 (1433)
..++|+||+|+|+.. ++..+|+|+|++|+||+.+||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999998521 1246999999999999999999999999999999999987741
Q ss_pred ----------------------------------------eeeeEEEEcCccCCc---ccccceEEEeccCCCCCCCCCH
Q 000541 902 ----------------------------------------YISGSIMISGYPKKQ---ETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 902 ----------------------------------------~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
+.+|+|++||.++.+ ..+++.+|||+|++.+| +.|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 158999999998754 45778899999999887 5799
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-------cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-------LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1011 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~L 1011 (1433)
+|||.|+. | +.+ ++.++++++..++.+ -.|+.+|..| ..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998862 2 222 223556666655543 3477888644 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhcceeEEecC---cEE-EEEcCC
Q 000541 1012 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIVEAFDELFLLKRG---GQE-IYVGSL 1073 (1433)
Q Consensus 1012 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g---G~~-~y~G~~ 1073 (1433)
|||||+||+.+...|++.|+++. .+++|+|+++|++ .....+|++++|++| |++ +..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 3689999999986 457889999999973 674 478874
No 21
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.3e-63 Score=682.51 Aligned_cols=211 Identities=18% Similarity=0.234 Sum_probs=177.1
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999998521 1259999999999999999999999999999999999887 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+++.++||||++.+++. |+||||.... +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 4567889999999999875 9999995211 112 2335667777776543 35556653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl--~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRL--NTIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 479999999986 45778999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 22
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9.5e-64 Score=623.61 Aligned_cols=450 Identities=20% Similarity=0.331 Sum_probs=346.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999987 9999999988754321 3469999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.|+...... . ..... .+....++.+++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~---~---~~~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNR---F---GRIDW------------------------KKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccc---c---CccCH------------------------HHHHHHHHHHHHHcCCCCCccCchh---
Confidence 9999999986432100 0 00000 0011235668999999987776665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++||.++|+.+++.++||+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 5999999999999999999999999999999999999999999999854 3 56777799999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|+++..|+.+++.. ++..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998776443200 0000000
Q ss_pred ccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHH
Q 000541 485 PFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGA 564 (1433)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~ 564 (1433)
+ . ..
T Consensus 238 -------------------------------------------------------------~--~--~~----------- 241 (501)
T PRK10762 238 -------------------------------------------------------------V--G--RK----------- 241 (501)
T ss_pred -------------------------------------------------------------c--C--CC-----------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHH
Q 000541 565 LFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQY 644 (1433)
Q Consensus 565 lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 644 (1433)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCc
Q 000541 645 LLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNS 724 (1433)
Q Consensus 645 ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~ 724 (1433)
.+.
T Consensus 242 --------------------------------------------------~~~--------------------------- 244 (501)
T PRK10762 242 --------------------------------------------------LED--------------------------- 244 (501)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCc
Q 000541 725 WRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGT 804 (1433)
Q Consensus 725 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1433)
..+.
T Consensus 245 ---~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 245 ---QYPR------------------------------------------------------------------------- 248 (501)
T ss_pred ---cccc-------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCC
Q 000541 805 IQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSG 884 (1433)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sG 884 (1433)
. . . +..+..++++|++. .+|+|+|+++++||+++|+||||
T Consensus 249 --~----~---~-------------~~~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NG 288 (501)
T PRK10762 249 --L----D---K-------------APGEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMG 288 (501)
T ss_pred --c----c---c-------------CCCCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCC
Confidence 0 0 0 00001356667652 26999999999999999999999
Q ss_pred CChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCC---CC
Q 000541 885 AGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQND---IHSPNVTVYESLLYSAWLRLPL---EV 954 (1433)
Q Consensus 885 aGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~---~~ 954 (1433)
|||||||++|+|..+ +.+|+|.++|.++... ..++.+||++|++ .+++.+||.|++.+........ ..
T Consensus 289 sGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 366 (501)
T PRK10762 289 AGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSL 366 (501)
T ss_pred CCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhccccccc
Confidence 999999999999876 4589999999875421 2345699999995 4778899999998753211100 01
Q ss_pred ChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000541 955 DSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1033 (1433)
Q Consensus 955 ~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~ 1033 (1433)
.....++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++
T Consensus 367 ~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~ 441 (501)
T PRK10762 367 KHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQF 441 (501)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHH
Confidence 2223345678899999995 5566653 479999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCc
Q 000541 1034 VDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGR 1075 (1433)
Q Consensus 1034 ~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~ 1075 (1433)
+++|+|||+++|++. .+.+.+|++++|.+ |++++.|+...
T Consensus 442 ~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 442 KAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 888999999999975 56778999999985 89999998753
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-64 Score=625.84 Aligned_cols=458 Identities=21% Similarity=0.295 Sum_probs=348.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 46999999999999999999999999999999999999887 9999999998765432 2469999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++...... .... ..... .+....++.+++.+||++..++.++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-~~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-NIIDW------------------------REMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhccccccc--cccc-cccCH------------------------HHHHHHHHHHHHHcCCCCCcccchh---
Confidence 9999999875321000 0000 00000 0112235678999999887777665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++++ . +++|++++|+..++.++||+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999865 3 56777799999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|++++.|+++++.. ++..+.
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHH----------------
Confidence 99999887654310 000000
Q ss_pred ccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHH
Q 000541 485 PFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGA 564 (1433)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~ 564 (1433)
+. . .. ..
T Consensus 241 ------------------------------------------------------------~~--~--~~-~~-------- 247 (510)
T PRK09700 241 ------------------------------------------------------------MV--G--RE-LQ-------- 247 (510)
T ss_pred ------------------------------------------------------------hc--C--CC-cc--------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHH
Q 000541 565 LFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQY 644 (1433)
Q Consensus 565 lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 644 (1433)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCc
Q 000541 645 LLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNS 724 (1433)
Q Consensus 645 ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~ 724 (1433)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCc
Q 000541 725 WRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGT 804 (1433)
Q Consensus 725 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1433)
. . ..+
T Consensus 251 ----~-------------------~----------------------------~~~------------------------ 255 (510)
T PRK09700 251 ----N-------------------A----------------------------MKE------------------------ 255 (510)
T ss_pred ----c-------------------c----------------------------ccc------------------------
Confidence 0 0 000
Q ss_pred cccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCC
Q 000541 805 IQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSG 884 (1433)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sG 884 (1433)
. . . . . + .+..++++|+++.+ ..+|+|+|+++++||+++|+||||
T Consensus 256 --~----~---~---~--~------~-~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~G~NG 299 (510)
T PRK09700 256 --N----V---S---N--L------A-HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFAGLVG 299 (510)
T ss_pred --c----c---c---c--C------C-CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEECCCC
Confidence 0 0 0 0 0 0 01136778877532 128999999999999999999999
Q ss_pred CChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccC---CCCCCCCCHHHHHHHHHHhc---CCC--
Q 000541 885 AGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQN---DIHSPNVTVYESLLYSAWLR---LPL-- 952 (1433)
Q Consensus 885 aGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~---d~~~~~lTv~E~l~f~a~lr---~~~-- 952 (1433)
||||||+++|+|..+ +.+|+|.++|.++... ..++.+||++|+ ..+++.+||+|++.+....+ ...
T Consensus 300 sGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 377 (510)
T PRK09700 300 SGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAM 377 (510)
T ss_pred CCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccc
Confidence 999999999999876 4689999999875321 234568999998 45788999999998753211 000
Q ss_pred C-CChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHH
Q 000541 953 E-VDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV 1030 (1433)
Q Consensus 953 ~-~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l 1030 (1433)
. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|
T Consensus 378 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l 452 (510)
T PRK09700 378 GLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVM 452 (510)
T ss_pred cccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHH
Confidence 0 01222334578899999996 6666654 479999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1031 RNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1031 ~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++++++|.|||+++|++. .+.+.+|++++|.+ |+++..++.
T Consensus 453 ~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 453 RQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred HHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999888999999999975 56778999999986 799988865
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-63 Score=628.46 Aligned_cols=487 Identities=20% Similarity=0.245 Sum_probs=353.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCC----------CCc------c-cce
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMD----------EFV------P-QRT 231 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 231 (1433)
.++|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|..++ ... . .+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999887 899999986431 111 1 136
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHHHHhc-CCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHH
Q 000541 232 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILK 308 (1433)
Q Consensus 232 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 308 (1433)
++||+|++ .+++.+||+||+.++.+.. +. .+. +....++.+++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGA----------SRE------------------------EAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHH
Confidence 99999997 5788999999999986532 11 000 11223567899
Q ss_pred HhCCCc---cccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 000541 309 ILGLDV---CADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISL 385 (1433)
Q Consensus 309 ~lgL~~---~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i 385 (1433)
.+||++ ..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.++++++.. +++||.+
T Consensus 152 ~~gL~~~~~~~~~~~-----~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRYP-----HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCCC-----ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 244444 4699999999999999999999999999999999999999999999986533 5667789
Q ss_pred ecChhhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHH
Q 000541 386 LQPAPETYDLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEF 465 (1433)
Q Consensus 386 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~ 465 (1433)
+|+..++.++||+|++|++|++++.|+++++.+ -|.+....+ +
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~-----------------------------l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRA-----------------------------L 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhh-----------------------------h
Confidence 999999999999999999999999998876531 000000000 0
Q ss_pred HHHHHhcccchhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHh
Q 000541 466 ADAFQVFYMGQKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLF 545 (1433)
Q Consensus 466 ~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf 545 (1433)
... .+
T Consensus 269 ~~~---------------~~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAA---------------VP------------------------------------------------------------ 273 (623)
T ss_pred hhc---------------cC------------------------------------------------------------
Confidence 000 00
Q ss_pred cccCCCCCccccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhh
Q 000541 546 FRTKMHRDSITDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVF 625 (1433)
Q Consensus 546 ~~~~~~~~~~~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 625 (1433)
+.. . .. + +. .|
T Consensus 274 -~~~---~-~~-~-----------------------------------~~-----------------~~----------- 284 (623)
T PRK10261 274 -QLG---A-MK-G-----------------------------------LD-----------------YP----------- 284 (623)
T ss_pred -ccc---c-cc-c-----------------------------------cc-----------------CC-----------
Confidence 000 0 00 0 00 00
Q ss_pred hhhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhH
Q 000541 626 LTYYVIGFDPNVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWC 705 (1433)
Q Consensus 626 i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~i 705 (1433)
. ..+.
T Consensus 285 ------------------------------------------------------------------~-~~~~-------- 289 (623)
T PRK10261 285 ------------------------------------------------------------------R-RFPL-------- 289 (623)
T ss_pred ------------------------------------------------------------------c-cccc--------
Confidence 0 0000
Q ss_pred ChHHHHHHHHHHHhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000541 706 SPLMYAQNAIVVNEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQ 785 (1433)
Q Consensus 706 sP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~ 785 (1433)
.. ...+.
T Consensus 290 ---------------~~---~~~~~------------------------------------------------------- 296 (623)
T PRK10261 290 ---------------IS---LEHPA------------------------------------------------------- 296 (623)
T ss_pred ---------------cc---ccccc-------------------------------------------------------
Confidence 00 00000
Q ss_pred cccccccccccccCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeec
Q 000541 786 AVISQESQSNEHDNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLN 865 (1433)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~ 865 (1433)
.. . + .... . .. +.....++++|+++.++...... ......+.+|+
T Consensus 297 -------~~--------------~--~--~~~~-~-~~------~~~~~~L~~~~l~~~y~~~~~~~--~~~~~~~~~l~ 341 (623)
T PRK10261 297 -------KQ--------------E--P--PIEQ-D-TV------VDGEPILQVRNLVTRFPLRSGLL--NRVTREVHAVE 341 (623)
T ss_pred -------cc--------------C--c--cccc-c-cc------cCCCceEEEeeeEEEEcCCCccc--cccCCceEEEe
Confidence 00 0 0 0000 0 00 00011378899988774210000 00001246999
Q ss_pred cceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc------cccceEEEeccCC--CCCCCCC
Q 000541 866 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE------TFARISGYCEQND--IHSPNVT 937 (1433)
Q Consensus 866 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~------~~~~~~gyv~Q~d--~~~~~lT 937 (1433)
||||.|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++|++|++ .+++.+|
T Consensus 342 ~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~t 419 (623)
T PRK10261 342 KVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQT 419 (623)
T ss_pred eeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCC
Confidence 9999999999999999999999999999999986 4689999999875321 2356799999996 5788999
Q ss_pred HHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000541 938 VYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1016 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTs 1016 (1433)
|.|++.+....+. .....+.++.++++++.++|. +..+.. +..|||||||||+||++|+.+|+||+|||||+
T Consensus 420 v~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDEPts 492 (623)
T PRK10261 420 VGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADEAVS 492 (623)
T ss_pred HHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 9999987643321 112334456788999999995 455554 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1017 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1017 gLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|||+.++..++++|++++++ |.|||+++|+++ .+...+|++++|.+ |+++..|+.
T Consensus 493 ~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 493 ALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999865 899999999975 46678999999985 899999985
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=6e-63 Score=616.77 Aligned_cols=453 Identities=20% Similarity=0.288 Sum_probs=345.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 46999999999999999999999999999999999999987 9999999988754332 2359999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.|+.... . +....++.+++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~-------------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR-------------Q-------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc-------------h-------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853100 0 001234568899999887777665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ . +++||.++|+.+++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 3 56777799999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|++++.|+++++... + ..+.+.
T Consensus 216 G~i~~~g~~~~~~~~---------------~-----------------------------~~~~~~-------------- 237 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------D-----------------------------IIQAIT-------------- 237 (510)
T ss_pred CEEEEecChHHcCHH---------------H-----------------------------HHHHHh--------------
Confidence 999999987654210 0 000000
Q ss_pred ccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHH
Q 000541 485 PFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGA 564 (1433)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~ 564 (1433)
....... ...
T Consensus 238 --------------------------------------------------------------~~~~~~~-~~~------- 247 (510)
T PRK15439 238 --------------------------------------------------------------PAAREKS-LSA------- 247 (510)
T ss_pred --------------------------------------------------------------Ccccccc-ccc-------
Confidence 0000000 000
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHH
Q 000541 565 LFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQY 644 (1433)
Q Consensus 565 lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 644 (1433)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCc
Q 000541 645 LLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNS 724 (1433)
Q Consensus 645 ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~ 724 (1433)
...
T Consensus 248 --------------------------------------------------~~~--------------------------- 250 (510)
T PRK15439 248 --------------------------------------------------SQK--------------------------- 250 (510)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCc
Q 000541 725 WRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGT 804 (1433)
Q Consensus 725 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1433)
.. ..+ + .
T Consensus 251 ~~-----------------~~~---------------------------------~----------~------------- 257 (510)
T PRK15439 251 LW-----------------LEL---------------------------------P----------G------------- 257 (510)
T ss_pred cc-----------------ccc---------------------------------c----------c-------------
Confidence 00 000 0 0
Q ss_pred cccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCC
Q 000541 805 IQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSG 884 (1433)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sG 884 (1433)
. .. . . +..+.-++++|++. .+|+|+|+.+++||++||+||||
T Consensus 258 --~--------~~--~--~------~~~~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NG 299 (510)
T PRK15439 258 --N--------RR--Q--Q------AAGAPVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVG 299 (510)
T ss_pred --c--------cc--c--c------CCCCceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCC
Confidence 0 00 0 0 00011366777662 15899999999999999999999
Q ss_pred CChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCCCCChh
Q 000541 885 AGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQND---IHSPNVTVYESLLYSAWLRLPLEVDSP 957 (1433)
Q Consensus 885 aGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~~~~~~ 957 (1433)
||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.|++......+.+......
T Consensus 300 sGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~ 377 (510)
T PRK15439 300 AGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPA 377 (510)
T ss_pred CCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChH
Confidence 999999999999876 4589999999875431 1234689999984 478889999998642111111111112
Q ss_pred HHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000541 958 TRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1036 (1433)
Q Consensus 958 ~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~ 1036 (1433)
..++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++
T Consensus 378 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~ 452 (510)
T PRK15439 378 RENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQ 452 (510)
T ss_pred HHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhC
Confidence 2335678899999996 5666653 579999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1037 GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1037 g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
|.|||+++|+++ .+.+.+|++++|.+ |++++.|..+
T Consensus 453 g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 453 NVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999999975 56778999999985 8999888764
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.3e-62 Score=616.59 Aligned_cols=446 Identities=22% Similarity=0.310 Sum_probs=343.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcceEEEECC-----------------------cc
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL--DSSLRVSGRVTYNG-----------------------HD 222 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l--~~~~~~~G~V~~~G-----------------------~~ 222 (1433)
++.+|+|+|+.+++|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .+
T Consensus 12 ~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 88 (520)
T TIGR03269 12 GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGT 88 (520)
T ss_pred CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEecccccccccccccccccccccccccc
Confidence 356999999999999999999999999999999999997 576 89999972 22
Q ss_pred CC-------CC------cccceEEEEcCC-CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHH
Q 000541 223 MD-------EF------VPQRTAAYISQH-DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVF 288 (1433)
Q Consensus 223 ~~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (1433)
+. .. ..++.++|++|+ +.+++.+||+||+.|+....+.. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~~--------------- 143 (520)
T TIGR03269 89 LEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------GK--------------- 143 (520)
T ss_pred ccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------HH---------------
Confidence 10 00 013468999997 67888999999999875432210 00
Q ss_pred HHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHH
Q 000541 289 MKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVN 368 (1433)
Q Consensus 289 ~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~ 368 (1433)
+....++.+++.+||++..+..++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+
T Consensus 144 ---------~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~ 209 (520)
T TIGR03269 144 ---------EAVGRAVDLIEMVQLSHRITHIAR-----DLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHN 209 (520)
T ss_pred ---------HHHHHHHHHHHHcCChhhhhcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHH
Confidence 011235678999999877666554 599999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhh
Q 000541 369 SLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQ 448 (1433)
Q Consensus 369 ~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~ 448 (1433)
.|+++++.. +++||+++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 210 ~l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~--------------------------- 261 (520)
T TIGR03269 210 ALEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM--------------------------- 261 (520)
T ss_pred HHHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH---------------------------
Confidence 999986533 5677779999999999999999999999998876554311000
Q ss_pred hhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHH
Q 000541 449 YWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYI 528 (1433)
Q Consensus 449 ~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~ 528 (1433)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHH
Q 000541 529 FKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALST 608 (1433)
Q Consensus 529 ~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~ 608 (1433)
.. .
T Consensus 262 ---------------------------~~-------------------~------------------------------- 264 (520)
T TIGR03269 262 ---------------------------EG-------------------V------------------------------- 264 (520)
T ss_pred ---------------------------hh-------------------c-------------------------------
Confidence 00 0
Q ss_pred HHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcc
Q 000541 609 WILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGF 688 (1433)
Q Consensus 609 ~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf 688 (1433)
T Consensus 265 -------------------------------------------------------------------------------- 264 (520)
T TIGR03269 265 -------------------------------------------------------------------------------- 264 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHH
Q 000541 689 VLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFN 768 (1433)
Q Consensus 689 ~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~ 768 (1433)
. .+..
T Consensus 265 --~--~~~~----------------------------------------------------------------------- 269 (520)
T TIGR03269 265 --S--EVEK----------------------------------------------------------------------- 269 (520)
T ss_pred --h--hhcc-----------------------------------------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHhcCCCCCcccccccccccccccCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecC
Q 000541 769 FGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMP 848 (1433)
Q Consensus 769 ~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 848 (1433)
. ... + . ...-++++|+++.++..
T Consensus 270 -----------~--------------------------~~~--~----------~--------~~~~l~~~~l~~~~~~~ 292 (520)
T TIGR03269 270 -----------E--------------------------CEV--E----------V--------GEPIIKVRNVSKRYISV 292 (520)
T ss_pred -----------c--------------------------ccc--C----------C--------CCceEEEeccEEEeccC
Confidence 0 000 0 0 00136788888776310
Q ss_pred ccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEc-Ccc---CCc------cc
Q 000541 849 QEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMIS-GYP---KKQ------ET 918 (1433)
Q Consensus 849 ~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~-G~~---~~~------~~ 918 (1433)
..+.+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ ... ..
T Consensus 293 --------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~ 362 (520)
T TIGR03269 293 --------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGR 362 (520)
T ss_pred --------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHH
Confidence 0122469999999999999999999999999999999999876 458999996 532 111 12
Q ss_pred ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHH
Q 000541 919 FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-----LRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 919 ~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-----~~~~~vg~~~~~~LSgGqr 993 (1433)
.++.+||++|++.+++.+||.|++.+...+. ......++.++++++.+++.+ ..++. +..||||||
T Consensus 363 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~ 433 (520)
T TIGR03269 363 AKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGER 433 (520)
T ss_pred HhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHH
Confidence 2456899999988889999999998754321 122333456788999999975 33443 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|++++|.+ |+++..|+
T Consensus 434 qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~ 511 (520)
T TIGR03269 434 HRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGD 511 (520)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 9999999999999999999999999999999999999999765 899999999975 46678999999985 89998887
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 512 ~ 512 (520)
T TIGR03269 512 P 512 (520)
T ss_pred H
Confidence 5
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-62 Score=615.91 Aligned_cols=464 Identities=22% Similarity=0.293 Sum_probs=347.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCCcc-------cceEEEEcCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD 239 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 239 (1433)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999862 1138999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHHHhc-CCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc--
Q 000541 240 N--HIGEMTVRETLAFSARCQ-GVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV-- 314 (1433)
Q Consensus 240 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-- 314 (1433)
. +.+.+||+|++.+..... +. .+. +....++.+++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGM----------RRE------------------------AARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHHHCCCCChH
Confidence 4 567789999988653211 10 000 11233567899999975
Q ss_pred -cccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000541 315 -CADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETY 393 (1433)
Q Consensus 315 -~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 393 (1433)
..+..++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++. .+.+||+++|+..++.
T Consensus 148 ~~~~~~~~-----~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYPH-----QLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCCc-----ccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 2355554 69999999999999999999999999999999999999999999998653 3566777999999999
Q ss_pred hhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcc
Q 000541 394 DLFDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFY 473 (1433)
Q Consensus 394 ~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~ 473 (1433)
++||+|++|++|++++.|+++++.+. +.. ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~------------------------------------~~~-----~~-------- 252 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA------------------------------------PTH-----PY-------- 252 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC------------------------------------CCC-----HH--------
Confidence 99999999999999999987654210 000 00
Q ss_pred cchhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 000541 474 MGQKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRD 553 (1433)
Q Consensus 474 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~ 553 (1433)
.+.+ +...
T Consensus 253 ----------------------------------------~~~~----------------------------~~~~---- 260 (529)
T PRK15134 253 ----------------------------------------TQKL----------------------------LNSE---- 260 (529)
T ss_pred ----------------------------------------HHHH----------------------------HHhC----
Confidence 0000 0000
Q ss_pred ccccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCc
Q 000541 554 SITDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGF 633 (1433)
Q Consensus 554 ~~~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 633 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHH
Q 000541 634 DPNVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQN 713 (1433)
Q Consensus 634 ~~~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~ 713 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccc
Q 000541 714 AIVVNEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQ 793 (1433)
Q Consensus 714 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~ 793 (1433)
... .+
T Consensus 261 ---------------~~~-----------------------------------------------~~------------- 265 (529)
T PRK15134 261 ---------------PSG-----------------------------------------------DP------------- 265 (529)
T ss_pred ---------------ccc-----------------------------------------------cc-------------
Confidence 000 00
Q ss_pred cccccCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeC
Q 000541 794 SNEHDNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRP 873 (1433)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~ 873 (1433)
. . . . .. .+.-++++|+++.++...+. .+...+.+.+|+|+|+++++
T Consensus 266 -------------~----~---~---~---~~------~~~~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i~~ 311 (529)
T PRK15134 266 -------------V----P---L---P---EP------ASPLLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTLRP 311 (529)
T ss_pred -------------c----c---c---C---CC------CCCcccccCcEEEeecCccc--cccccccceeeecceeEEcC
Confidence 0 0 0 0 00 00125677777766311000 00000124699999999999
Q ss_pred CeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc------cccceEEEeccCC--CCCCCCCHHHHHHHH
Q 000541 874 GVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE------TFARISGYCEQND--IHSPNVTVYESLLYS 945 (1433)
Q Consensus 874 Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~ 945 (1433)
||++||+||||||||||+++|+|..+ .+|+|+++|.++... .+++.++|++|+. .+++.+||.|++.+.
T Consensus 312 Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~ 388 (529)
T PRK15134 312 GETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEG 388 (529)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHH
Confidence 99999999999999999999999873 489999999865321 1245689999996 477889999999886
Q ss_pred HHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHH
Q 000541 946 AWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1024 (1433)
Q Consensus 946 a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~ 1024 (1433)
...+.. ..+....++.++++++.+++. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++.
T Consensus 389 ~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~ 462 (529)
T PRK15134 389 LRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQA 462 (529)
T ss_pred HHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHH
Confidence 533211 122333456688999999996 355554 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1025 IVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1025 ~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
.+++.|++++++ |+|||+++|++. .+.+.+|++++|.+ |+++..|+.
T Consensus 463 ~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 463 QILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999875 899999999974 46678999999985 899998875
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.4e-62 Score=611.80 Aligned_cols=461 Identities=20% Similarity=0.285 Sum_probs=346.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIG 243 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 243 (1433)
++++|+|+|+++++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++
T Consensus 13 ~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 13 GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 356999999999999999999999999999999999998761 128999999988765332 246999999988899
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc-cccccC
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA-DTMVGD 322 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~-dt~vg~ 322 (1433)
.+||+||+.++......+.. ... .+....++.+++.+||++.. +..++
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~- 140 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGR------MAY------------------------NAMYLRAKNLLRELQLDADNVTRPVG- 140 (500)
T ss_pred CCcHHHHHHhhccccccccc------cCH------------------------HHHHHHHHHHHHHcCCCCCcccCchh-
Confidence 99999999886432100000 000 00112356689999998654 44454
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+..++.++||+|++|
T Consensus 141 ----~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tviiitHd~~~~~~~~d~i~~l 214 (500)
T TIGR02633 141 ----DYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA--HGVACVYISHKLNEVKAVCDTICVI 214 (500)
T ss_pred ----hCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCcHHHHHHhCCEEEEE
Confidence 5999999999999999999999999999999999999999999999864 3567777999999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhh
Q 000541 403 SDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDEL 482 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l 482 (1433)
++|++++.|+.+++.. ++..+
T Consensus 215 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 235 (500)
T TIGR02633 215 RDGQHVATKDMSTMSE--------------------------------------------DDIIT--------------- 235 (500)
T ss_pred eCCeEeeecCcccCCH--------------------------------------------HHHHH---------------
Confidence 9999987664321100 00000
Q ss_pred cCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhh
Q 000541 483 RIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYT 562 (1433)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~ 562 (1433)
. +.
T Consensus 236 ---------------------------------~----------------------------~~---------------- 238 (500)
T TIGR02633 236 ---------------------------------M----------------------------MV---------------- 238 (500)
T ss_pred ---------------------------------H----------------------------Hh----------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHH
Q 000541 563 GALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFR 642 (1433)
Q Consensus 563 g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~ 642 (1433)
+.
T Consensus 239 ---------------------------------------------------------------------~~--------- 240 (500)
T TIGR02633 239 ---------------------------------------------------------------------GR--------- 240 (500)
T ss_pred ---------------------------------------------------------------------Cc---------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcC
Q 000541 643 QYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLG 722 (1433)
Q Consensus 643 ~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~ 722 (1433)
+ .+.
T Consensus 241 ------------------------------------------------~---~~~------------------------- 244 (500)
T TIGR02633 241 ------------------------------------------------E---ITS------------------------- 244 (500)
T ss_pred ------------------------------------------------c---ccc-------------------------
Confidence 0 000
Q ss_pred CcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCC
Q 000541 723 NSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTG 802 (1433)
Q Consensus 723 ~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1433)
. . + .
T Consensus 245 -----~-------------------------------------------------~-~----------~----------- 248 (500)
T TIGR02633 245 -----L-------------------------------------------------Y-P----------H----------- 248 (500)
T ss_pred -----c-------------------------------------------------c-c----------c-----------
Confidence 0 0 0 0
Q ss_pred CccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEecc
Q 000541 803 GTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGV 882 (1433)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~ 882 (1433)
. . .+. ...-++++|+++.+.. .+++.+|+|+|+++++||++||+||
T Consensus 249 ------~--~----------~~~------~~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G~ 294 (500)
T TIGR02633 249 ------E--P----------HEI------GDVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAGL 294 (500)
T ss_pred ------c--c----------cCC------CCceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeCC
Confidence 0 0 000 0013677787765420 0123589999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCC--CC
Q 000541 883 SGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ----ETFARISGYCEQND---IHSPNVTVYESLLYSAWLRLP--LE 953 (1433)
Q Consensus 883 sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~--~~ 953 (1433)
|||||||||++|+|..++ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|++.+...-... ..
T Consensus 295 NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~ 373 (500)
T TIGR02633 295 VGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMR 373 (500)
T ss_pred CCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCc
Confidence 999999999999998762 248999999987642 12345689999995 578899999999875321110 01
Q ss_pred CChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHH
Q 000541 954 VDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 1032 (1433)
Q Consensus 954 ~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~ 1032 (1433)
......++.++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++
T Consensus 374 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 448 (500)
T TIGR02633 374 IDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQ 448 (500)
T ss_pred CCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHH
Confidence 122333456788999999964 455543 47999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1033 TVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1033 ~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
++++|.|||+++|+++ .+.+.+|++++|.+ |+++..++..
T Consensus 449 l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 449 LAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9888999999999975 56778999999985 8898877653
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-62 Score=609.83 Aligned_cols=451 Identities=21% Similarity=0.308 Sum_probs=343.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc----ccceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV----PQRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 46999999999999999999999999999999999999887 999999998875332 13569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++......+ . ... .+....++.+++.+||++..+..++
T Consensus 94 ~tv~~~l~~~~~~~~~~----~---~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (501)
T PRK11288 94 MTVAENLYLGQLPHKGG----I---VNR------------------------RLLNYEAREQLEHLGVDIDPDTPLK--- 139 (501)
T ss_pred CCHHHHHHhcccccccC----C---CCH------------------------HHHHHHHHHHHHHcCCCCCcCCchh---
Confidence 99999999863210000 0 000 0011235668999999876666554
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+++||.++|+..++.++||+|++|++
T Consensus 140 --~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 140 --YLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA--EGRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred --hCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999854 356777799999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhhcC
Q 000541 405 GQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDELRI 484 (1433)
Q Consensus 405 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l~~ 484 (1433)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999864421000 000000000
Q ss_pred ccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhhHH
Q 000541 485 PFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYTGA 564 (1433)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~g~ 564 (1433)
+.. ..
T Consensus 237 ------------------------------------------------------------~~~----~~----------- 241 (501)
T PRK11288 237 ------------------------------------------------------------MVG----RE----------- 241 (501)
T ss_pred ------------------------------------------------------------hcC----CC-----------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHHHH
Q 000541 565 LFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFRQY 644 (1433)
Q Consensus 565 lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 644 (1433)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcCCc
Q 000541 645 LLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLGNS 724 (1433)
Q Consensus 645 ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~~~ 724 (1433)
... .
T Consensus 242 --------------------------------------------------~~~--------------------------~ 245 (501)
T PRK11288 242 --------------------------------------------------IGD--------------------------I 245 (501)
T ss_pred --------------------------------------------------ccc--------------------------c
Confidence 000 0
Q ss_pred ccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCCCc
Q 000541 725 WRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTGGT 804 (1433)
Q Consensus 725 ~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1433)
+ .
T Consensus 246 ~------------------------------------------------------~------------------------ 247 (501)
T PRK11288 246 Y------------------------------------------------------G------------------------ 247 (501)
T ss_pred c------------------------------------------------------c------------------------
Confidence 0 0
Q ss_pred cccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCC
Q 000541 805 IQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSG 884 (1433)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sG 884 (1433)
. . + . . ..+..++++|+++. .+++|+|+++++||++||+||||
T Consensus 248 --~-~--~---~------~-------~~~~~l~~~~~~~~-----------------~~l~~isl~i~~Ge~~~iiG~NG 289 (501)
T PRK11288 248 --Y-R--P---R------P-------LGEVRLRLDGLKGP-----------------GLREPISFSVRAGEIVGLFGLVG 289 (501)
T ss_pred --c-c--c---c------C-------CCCcEEEEeccccC-----------------CcccceeEEEeCCcEEEEEcCCC
Confidence 0 0 0 0 0 00113666776521 38999999999999999999999
Q ss_pred CChHHHHhhhcCCCCCCeeeeEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHHHHHHhcC-CCC--C
Q 000541 885 AGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ----ETFARISGYCEQND---IHSPNVTVYESLLYSAWLRL-PLE--V 954 (1433)
Q Consensus 885 aGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~-~~~--~ 954 (1433)
||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|++ .+++.+|+.|++.+...... +.. .
T Consensus 290 sGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~ 367 (501)
T PRK11288 290 AGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLI 367 (501)
T ss_pred CCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhccccccc
Confidence 999999999999876 468999999986532 12245689999985 47889999999987532111 000 1
Q ss_pred ChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000541 955 DSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1033 (1433)
Q Consensus 955 ~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~ 1033 (1433)
.....++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+++
T Consensus 368 ~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l 442 (501)
T PRK11288 368 NNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYEL 442 (501)
T ss_pred ChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHH
Confidence 1222335678899999994 5666654 479999999999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCc
Q 000541 1034 VDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGR 1075 (1433)
Q Consensus 1034 ~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~ 1075 (1433)
++.|.|||+++||+. .+.+.+|++++|.+ |++++.|..++
T Consensus 443 ~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 443 AAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred HhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 888999999999975 57788999999985 89999998764
No 30
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.4e-61 Score=657.70 Aligned_cols=211 Identities=23% Similarity=0.283 Sum_probs=177.8
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+++|+. +...+|+|||++|+|||.+||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 36999999999852 12359999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.. ..+++.++||||++.+|.. |++|||... .+.+ ++.+.++++..++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4578899999999988865 999999421 1112 3446778888777653 35666653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 984 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~-p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
..+||||||||++|||||+++ |+||+||||||+||+.+...|++.|++.. +++|||+++|++ +....+|+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEE
Confidence 467999999999999999995 89999999999999999999999999864 479999999986 5678899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999986
No 31
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=9.5e-61 Score=654.56 Aligned_cols=210 Identities=20% Similarity=0.249 Sum_probs=177.0
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+++|+. +.+.+|+|||++|+|||.+||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999999852 12469999999999999999999999999999999999874 48999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+++.++||||++.+++. |+||||... . +..++.+.++++.+++.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~-------~---~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY-------E---QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc-------c---CCCHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 764 4567889999999999875 999999421 1 1123456778888887543 35556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|++ +....+|+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl--~ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRV--EALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCH--HHHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 479999999986 46677999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-61 Score=600.60 Aligned_cols=451 Identities=18% Similarity=0.293 Sum_probs=342.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIG 243 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 243 (1433)
++++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 86 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVL 86 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccccccc
Confidence 457999999999999999999999999999999999999987 9999999998754321 356999999988899
Q ss_pred CCCHHHHHHHHHH-hcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 244 EMTVRETLAFSAR-CQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 244 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
.+||+||+.++.. ..+.. ... .+....++.+++.+||++..++.++
T Consensus 87 ~~tv~~~l~~~~~~~~~~~--------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 133 (491)
T PRK10982 87 QRSVMDNMWLGRYPTKGMF--------VDQ------------------------DKMYRDTKAIFDELDIDIDPRAKVA- 133 (491)
T ss_pred CCCHHHHhhcccccccccc--------cCH------------------------HHHHHHHHHHHHHcCCCCCccCchh-
Confidence 9999999988532 10000 000 0011235668899999877776665
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++++ .+++|+.++|+.+++.++||+|++|
T Consensus 134 ----~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~--~g~tvii~tH~~~~~~~~~d~i~~l 207 (491)
T PRK10982 134 ----TLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE--RGCGIVYISHKMEEIFQLCDEITIL 207 (491)
T ss_pred ----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 5999999999999999999999999999999999999999999999864 3566777999999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhhhhhh
Q 000541 403 SDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKVGDEL 482 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~~~~l 482 (1433)
++|+++..|+++++.. ++..+.
T Consensus 208 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~-------------- 229 (491)
T PRK10982 208 RDGQWIATQPLAGLTM--------------------------------------------DKIIAM-------------- 229 (491)
T ss_pred ECCEEEeecChhhCCH--------------------------------------------HHHHHH--------------
Confidence 9999998876543100 000000
Q ss_pred cCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccchhhh
Q 000541 483 RIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDGVIYT 562 (1433)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~~~~~ 562 (1433)
+.. ..
T Consensus 230 --------------------------------------------------------------~~~----~~--------- 234 (491)
T PRK10982 230 --------------------------------------------------------------MVG----RS--------- 234 (491)
T ss_pred --------------------------------------------------------------HhC----CC---------
Confidence 000 00
Q ss_pred HHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHhHHHH
Q 000541 563 GALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVGRLFR 642 (1433)
Q Consensus 563 g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~ 642 (1433)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHHhhcC
Q 000541 643 QYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVNEFLG 722 (1433)
Q Consensus 643 ~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~nef~~ 722 (1433)
+.
T Consensus 235 ----------------------------------------------------~~-------------------------- 236 (491)
T PRK10982 235 ----------------------------------------------------LT-------------------------- 236 (491)
T ss_pred ----------------------------------------------------cc--------------------------
Confidence 00
Q ss_pred CcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccccCCCC
Q 000541 723 NSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHDNRTG 802 (1433)
Q Consensus 723 ~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1433)
... +
T Consensus 237 ~~~------------------------------------------------------~---------------------- 240 (491)
T PRK10982 237 QRF------------------------------------------------------P---------------------- 240 (491)
T ss_pred ccc------------------------------------------------------c----------------------
Confidence 000 0
Q ss_pred CccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEecc
Q 000541 803 GTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGV 882 (1433)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~ 882 (1433)
. . . . . + .+..++++|+++.. +.+|+|||+.+++||++||+||
T Consensus 241 ---------~-~-~---~--~------~-~~~~i~~~~l~~~~---------------~~~l~~vsl~i~~Ge~~~l~G~ 282 (491)
T PRK10982 241 ---------D-K-E---N--K------P-GEVILEVRNLTSLR---------------QPSIRDVSFDLHKGEILGIAGL 282 (491)
T ss_pred ---------c-c-c---C--C------C-CCcEEEEeCccccc---------------CcccceeeEEEeCCcEEEEecC
Confidence 0 0 0 0 0 0 01137788887641 1489999999999999999999
Q ss_pred CCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHHHHHH--hcCCCC
Q 000541 883 SGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQND---IHSPNVTVYESLLYSAW--LRLPLE 953 (1433)
Q Consensus 883 sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~--lr~~~~ 953 (1433)
||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.++..+.-. ......
T Consensus 283 nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (491)
T PRK10982 283 VGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVG 360 (491)
T ss_pred CCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhccccc
Confidence 99999999999999887 4689999999876431 1245589999985 35788888877432210 000001
Q ss_pred -CChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHH
Q 000541 954 -VDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR 1031 (1433)
Q Consensus 954 -~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~ 1031 (1433)
.+....++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|+
T Consensus 361 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~ 435 (491)
T PRK10982 361 LLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA 435 (491)
T ss_pred ccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHH
Confidence 11223345678889999885 344554 35799999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1032 NTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1032 ~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
++.++|.|||+++|+++ ++.+.+|++++|.+ |+++..++..
T Consensus 436 ~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 436 ELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred HHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 99888999999999975 56778999999985 8998777653
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.1e-60 Score=592.75 Aligned_cols=447 Identities=20% Similarity=0.264 Sum_probs=329.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCC--C-
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNH--I- 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~--~- 242 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 16 ~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (490)
T PRK10938 16 TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLS 92 (490)
T ss_pred eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhcc
Confidence 45999999999999999999999999999999999999987 9999999976643221 2458999998532 1
Q ss_pred -----CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccc
Q 000541 243 -----GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCAD 317 (1433)
Q Consensus 243 -----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 317 (1433)
..+||+|++.+.. +....++.+++.+||++..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 93 PGEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLD 130 (490)
T ss_pred cchhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhh
Confidence 1467777764310 00123456889999988777
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
..++ .|||||||||+||++|+.+|++++|||||+|||+.++.++.+.|+++++ . +++||.++|+..++.++||
T Consensus 131 ~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d 203 (490)
T PRK10938 131 RRFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQ 203 (490)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCC
Confidence 7665 5999999999999999999999999999999999999999999999864 3 5667779999999999999
Q ss_pred eEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchh
Q 000541 398 DIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQK 477 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~ 477 (1433)
+|++|++|+++.+|+++++.+. +.+. ++
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~~---------------~~~~-------------------------~~------------ 231 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQQ---------------ALVA-------------------------QL------------ 231 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhcc---------------hhhh-------------------------hh------------
Confidence 9999999999999886654210 0000 00
Q ss_pred hhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc
Q 000541 478 VGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITD 557 (1433)
Q Consensus 478 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~ 557 (1433)
. .. .....
T Consensus 232 -----~------------------------------~~-------------------------------------~~~~~ 239 (490)
T PRK10938 232 -----A------------------------------HS-------------------------------------EQLEG 239 (490)
T ss_pred -----h------------------------------hh-------------------------------------hccCc
Confidence 0 00 00000
Q ss_pred chhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccH
Q 000541 558 GVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNV 637 (1433)
Q Consensus 558 ~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 637 (1433)
.
T Consensus 240 ---------------------------------------------------------------------------~---- 240 (490)
T PRK10938 240 ---------------------------------------------------------------------------V---- 240 (490)
T ss_pred ---------------------------------------------------------------------------c----
Confidence 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHH
Q 000541 638 GRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVV 717 (1433)
Q Consensus 638 ~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~ 717 (1433)
. .+
T Consensus 241 -----------------------------------------------------~---~~--------------------- 243 (490)
T PRK10938 241 -----------------------------------------------------Q---LP--------------------- 243 (490)
T ss_pred -----------------------------------------------------c---cC---------------------
Confidence 0 00
Q ss_pred HhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccccc
Q 000541 718 NEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEH 797 (1433)
Q Consensus 718 nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~ 797 (1433)
... ..
T Consensus 244 ------------~~~----------------------------------------------------------~~----- 248 (490)
T PRK10938 244 ------------EPD----------------------------------------------------------EP----- 248 (490)
T ss_pred ------------ccc----------------------------------------------------------cc-----
Confidence 000 00
Q ss_pred cCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEE
Q 000541 798 DNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLT 877 (1433)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ 877 (1433)
. . + . ... .....++++|+++.++ ++.+|+|+|+.+++||++
T Consensus 249 -~-------~----~---~-----~~~------~~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~ 289 (490)
T PRK10938 249 -S-------A----R---H-----ALP------ANEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHW 289 (490)
T ss_pred -c-------c----c---c-----ccC------CCCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEE
Confidence 0 0 0 0 000 0011378899988763 235999999999999999
Q ss_pred EEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc----ccccceEEEeccCCCCCC--CCCHHHHHHHHHHh--c
Q 000541 878 ALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ----ETFARISGYCEQNDIHSP--NVTVYESLLYSAWL--R 949 (1433)
Q Consensus 878 ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~~~~--~lTv~E~l~f~a~l--r 949 (1433)
+|+||||||||||+++|+|..++ ..+|+|+++|.+... ...++.+||++|++.+++ ..|++|++.+.... .
T Consensus 290 ~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (490)
T PRK10938 290 QIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIG 368 (490)
T ss_pred EEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccc
Confidence 99999999999999999997531 148999999976421 123456899999875543 35777766543211 1
Q ss_pred CCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHH
Q 000541 950 LPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMR 1028 (1433)
Q Consensus 950 ~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~ 1028 (1433)
..... ....++.++++++.+++.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++
T Consensus 369 ~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 442 (490)
T PRK10938 369 IYQAV-SDRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRR 442 (490)
T ss_pred cccCC-CHHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHH
Confidence 11111 1223456789999999986 666553 5799999999999999999999999999999999999999999
Q ss_pred HHHHHHhCC-CEEEEEecCCCHHHHH-HhcceeEEecCcEEEEE
Q 000541 1029 TVRNTVDTG-RTVVCTIHQPSIDIVE-AFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 1029 ~l~~~~~~g-~tvi~t~Hqp~~~~~~-~fd~~~ll~~gG~~~y~ 1070 (1433)
.|++++++| .|||+++|+++ ++.+ .+|++++|.+ |+++..
T Consensus 443 ~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 443 FVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred HHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 999998776 47999999975 3445 4789999986 777664
No 34
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.2e-58 Score=575.83 Aligned_cols=201 Identities=23% Similarity=0.318 Sum_probs=163.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999998763 2469999999999999999999999999999999999876 46899999542
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000541 915 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGq 992 (1433)
..+||++|+. .+++.+||+|++.+....+. .... ....+++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 67889999999987643211 1111 123456899999863 34554 35799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE-EEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI-YVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~-y~G 1071 (1433)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||+++|++. .+...+|++++|.+||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999975 4667789999998767776 444
Q ss_pred C
Q 000541 1072 S 1072 (1433)
Q Consensus 1072 ~ 1072 (1433)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-57 Score=505.44 Aligned_cols=471 Identities=24% Similarity=0.332 Sum_probs=366.4
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCccCCCCccc-------ceEEEEcC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRVSGRVTYNGHDMDEFVPQ-------RTAAYISQ 237 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 237 (1433)
+...++++|||.|++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|+.|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 346799999999999999999999999999999999999976 245689999999997554322 36999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcc
Q 000541 238 HD--NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVC 315 (1433)
Q Consensus 238 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 315 (1433)
++ .+-|-.|+...|.-..++... +++ ..+..++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~~------------------------~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LSR------------------------AAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------ccH------------------------HHHHHHHHHHHHHcCCCch
Confidence 96 456777888877766655311 111 1123345668899999876
Q ss_pred ccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh
Q 000541 316 ADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDL 395 (1433)
Q Consensus 316 ~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 395 (1433)
.... +.+...|||||||||.||.||+.+|++||-||||++||.....+|++.|+++.... +..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5433 46778999999999999999999999999999999999999999999999997655 67788899999999999
Q ss_pred cCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccc
Q 000541 396 FDDIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMG 475 (1433)
Q Consensus 396 ~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~ 475 (1433)
+|+|+||.+|+|+++|+.+++.. .|.+ ||
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pY------------------ 253 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PY------------------ 253 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hH------------------
Confidence 99999999999999999877632 1110 00
Q ss_pred hhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 000541 476 QKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSI 555 (1433)
Q Consensus 476 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~ 555 (1433)
. |..+. .
T Consensus 254 --------------------------T------------r~Ll~----------------------------a------- 260 (534)
T COG4172 254 --------------------------T------------RKLLA----------------------------A------- 260 (534)
T ss_pred --------------------------H------------HHHHh----------------------------c-------
Confidence 0 00000 0
Q ss_pred ccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccc
Q 000541 556 TDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDP 635 (1433)
Q Consensus 556 ~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 635 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHH
Q 000541 636 NVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAI 715 (1433)
Q Consensus 636 ~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al 715 (1433)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccc
Q 000541 716 VVNEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSN 795 (1433)
Q Consensus 716 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 795 (1433)
.+.+.
T Consensus 261 ------------eP~g~--------------------------------------------------------------- 265 (534)
T COG4172 261 ------------EPSGD--------------------------------------------------------------- 265 (534)
T ss_pred ------------CCCCC---------------------------------------------------------------
Confidence 00000
Q ss_pred cccCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCe
Q 000541 796 EHDNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGV 875 (1433)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 875 (1433)
+ .+ ..+..+..++.+|+...++.+..+-.. ..+...+++|||++.++||
T Consensus 266 ----------------~----------~p---~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gq 314 (534)
T COG4172 266 ----------------P----------PP---LPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQ 314 (534)
T ss_pred ----------------C----------CC---CCCCCCceEEecceEEEEecCCccccc--cchheEEeccceeEecCCC
Confidence 0 00 000112345666666555544322211 1234579999999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc------ccccceEEEeccCC--CCCCCCCHHHHHHHHHH
Q 000541 876 LTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ------ETFARISGYCEQND--IHSPNVTVYESLLYSAW 947 (1433)
Q Consensus 876 ~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~ 947 (1433)
.+||+|.||||||||-.+|.++.. .+|+|.++|+++.. ...++.+-.|+||+ .+.|.+||.|-+.-+..
T Consensus 315 TlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~ 391 (534)
T COG4172 315 TLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLR 391 (534)
T ss_pred eEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhh
Confidence 999999999999999999999875 35999999998753 23567788999997 46799999999987766
Q ss_pred hcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHH
Q 000541 948 LRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1027 (1433)
Q Consensus 948 lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~ 1027 (1433)
...| ..+..++++++.++++.+||.+-. .... ...+|||||||++|||||+-+|++++||||||.||-.-+.+|+
T Consensus 392 vh~~-~ls~~eR~~rv~~aL~EVGLDp~~--r~RY--PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv 466 (534)
T COG4172 392 VHEP-KLSAAERDQRVIEALEEVGLDPAT--RNRY--PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVL 466 (534)
T ss_pred hcCC-CCCHHHHHHHHHHHHHHcCCChhH--hhcC--CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHH
Confidence 6544 457788999999999999998632 2223 3579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1028 RTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1028 ~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++||++.++ |.+-++++||.. -+-.++|++++|.+ |++|..|+.
T Consensus 467 ~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 467 DLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999755 899999999964 35667899999985 899999996
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-57 Score=571.37 Aligned_cols=198 Identities=17% Similarity=0.268 Sum_probs=164.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 489999998773 2359999999999999999999999999999999999876 45899999883
Q ss_pred CcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000541 915 KQETFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgG 991 (1433)
+.+||++|+.. +.+.+||+|++.+.. .+ ...++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-----~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-----GDDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-----CccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 456799999986421 11 11234577899999984 455554 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE-EE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI-YV 1070 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~-y~ 1070 (1433)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||+++|++. .+...+|++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999987 459999999975 46677899999986 6776 77
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.2e-57 Score=570.48 Aligned_cols=201 Identities=20% Similarity=0.295 Sum_probs=163.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 488999988763 2469999999999999999999999999999999999876 45899999542
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000541 915 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGq 992 (1433)
..+||++|+. .+++.+||.|++.+...... .... +...+++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999986 47788999999987642211 1111 223457899999864 34554 35799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE-EEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI-YVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~-y~G 1071 (1433)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. .|||+++|++. .+...+|++++|.+||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999873 48999999974 4666789999998767776 444
Q ss_pred C
Q 000541 1072 S 1072 (1433)
Q Consensus 1072 ~ 1072 (1433)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.7e-55 Score=552.00 Aligned_cols=211 Identities=20% Similarity=0.258 Sum_probs=172.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ + ..|+++|+++++||++||+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 478889887663 1 24899999999999999999999999999999999887 458999886
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
..++|++|+..+.+.+||+|++.+.... . . ....++++++.+++.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~---~--~---~~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD---L--G---SSYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh---c--C---hHHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1479999998888899999999874211 1 1 1224678999999987777654 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|. |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999864 899999999964 4566789999995 477777774
Q ss_pred CcC---hhHHHHHHhhC
Q 000541 1074 GRH---SSHLIKYFEGI 1087 (1433)
Q Consensus 1074 ~~~---~~~~~~yF~~~ 1087 (1433)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 332 12345566665
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-54 Score=552.02 Aligned_cols=197 Identities=21% Similarity=0.348 Sum_probs=160.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 488999998773 2469999999999999999999999999999999999886 56899999742
Q ss_pred CcccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000541 915 KQETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgG 991 (1433)
..+||++|+. .+.+..|+.+++.- . . .......+.++++.+++.+ ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~----~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--A----PQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--C----chhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34566678777531 1 1 1122345778899999863 455543 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE-EE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI-YV 1070 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~-y~ 1070 (1433)
|||||+||++|+.+|+||+|||||+|||+.+...+.+.|+++ . .|||+++||+. .+...+|++++|.+ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999974 46677999999985 7876 77
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.8e-54 Score=550.83 Aligned_cols=201 Identities=24% Similarity=0.351 Sum_probs=161.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 488999998763 2469999999999999999999999999999999999876 46899998 5321
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000541 915 KQETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSgGq 992 (1433)
.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 578899999999875321 0 111 1123467788888885 3445543 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEE-EEEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE-IYVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~-~y~G 1071 (1433)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||+++||+. .+...+|+++++..+|++ .|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999886 459999999964 466779999999733555 4555
Q ss_pred C
Q 000541 1072 S 1072 (1433)
Q Consensus 1072 ~ 1072 (1433)
.
T Consensus 522 ~ 522 (635)
T PRK11147 522 G 522 (635)
T ss_pred C
Confidence 4
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-54 Score=513.27 Aligned_cols=455 Identities=21% Similarity=0.355 Sum_probs=354.7
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc----ceEEEEc
Q 000541 161 ILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ----RTAAYIS 236 (1433)
Q Consensus 161 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 236 (1433)
...++.+..++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++..-..++ .-|+.|.
T Consensus 13 ~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~ 89 (500)
T COG1129 13 GISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVH 89 (500)
T ss_pred cceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEe
Confidence 3456667789999999999999999999999999999999999999998 99999999988755553 3589999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc
Q 000541 237 QHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA 316 (1433)
Q Consensus 237 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 316 (1433)
|+..+.|+|||.|||.++...... . .-+.+ .+....+..+|+.+|++...
T Consensus 90 QEl~L~p~LsVaeNifLgre~~~~---~---g~id~------------------------~~m~~~A~~~l~~lg~~~~~ 139 (500)
T COG1129 90 QELSLVPNLSVAENIFLGREPTRR---F---GLIDR------------------------KAMRRRARELLARLGLDIDP 139 (500)
T ss_pred echhccCCccHHHHhhcccccccC---C---CccCH------------------------HHHHHHHHHHHHHcCCCCCh
Confidence 999999999999999887543210 0 00111 11223456789999997668
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
++.|++ ||+||||.|.||+||..++++++|||||+.|+...+..+++.++++.. ++..||.|+|..+|++++|
T Consensus 140 ~~~v~~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~ 212 (500)
T COG1129 140 DTLVGD-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIA 212 (500)
T ss_pred hhhhhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhc
Confidence 888886 999999999999999999999999999999999999999999999853 5888999999999999999
Q ss_pred CeEEEecCCeEEEecCh-hHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccc
Q 000541 397 DDIILISDGQIVYQGPR-EHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMG 475 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~ 475 (1433)
|+|.||.||+++..++. .+. +.+++.+
T Consensus 213 DritVlRDG~~v~~~~~~~~~--------------------------------------------~~~~lv~-------- 240 (500)
T COG1129 213 DRITVLRDGRVVGTRPTAAET--------------------------------------------SEDELVR-------- 240 (500)
T ss_pred CEEEEEeCCEEeeecccccCC--------------------------------------------CHHHHHH--------
Confidence 99999999999876652 211 0000000
Q ss_pred hhhhhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 000541 476 QKVGDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSI 555 (1433)
Q Consensus 476 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~ 555 (1433)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccc
Q 000541 556 TDGVIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDP 635 (1433)
Q Consensus 556 ~~~~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 635 (1433)
.|+|=.
T Consensus 241 -------------------------------------------------------------------------~MvGr~- 246 (500)
T COG1129 241 -------------------------------------------------------------------------LMVGRE- 246 (500)
T ss_pred -------------------------------------------------------------------------HhhCcc-
Confidence 000000
Q ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHH
Q 000541 636 NVGRLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAI 715 (1433)
Q Consensus 636 ~~~~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al 715 (1433)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccc
Q 000541 716 VVNEFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSN 795 (1433)
Q Consensus 716 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 795 (1433)
.. ..|
T Consensus 247 ----~~-~~~---------------------------------------------------------------------- 251 (500)
T COG1129 247 ----LE-DLF---------------------------------------------------------------------- 251 (500)
T ss_pred ----hh-hhc----------------------------------------------------------------------
Confidence 00 000
Q ss_pred cccCCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCe
Q 000541 796 EHDNRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGV 875 (1433)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 875 (1433)
+ . . . .. ...+..+++++++.. ..++||||++++||
T Consensus 252 ----------------~---~-~-~-~~------~~~~~~l~v~~l~~~-----------------~~~~dvSf~vr~GE 286 (500)
T COG1129 252 ----------------P---E-P-P-EE------GIGEPVLEVRNLSGG-----------------GKVRDVSFTVRAGE 286 (500)
T ss_pred ----------------c---c-c-c-cc------CCCCcEEEEecCCCC-----------------CceeCceeEEeCCc
Confidence 0 0 0 0 00 001123555665431 15789999999999
Q ss_pred EEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccC---CCCCCCCCHHHHHHHHHHh
Q 000541 876 LTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQN---DIHSPNVTVYESLLYSAWL 948 (1433)
Q Consensus 876 ~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~---d~~~~~lTv~E~l~f~a~l 948 (1433)
++||-|-=|||+|-|+++|.|..+ ..+|+|.+||++.... ..+..++|||.| +-+++.++|.||+.++...
T Consensus 287 IlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~ 364 (500)
T COG1129 287 ILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLR 364 (500)
T ss_pred EEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhh
Confidence 999999999999999999999665 4589999999976532 344578999987 4578899999999887332
Q ss_pred cCC-C-CCChhHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHH
Q 000541 949 RLP-L-EVDSPTRKMFIEEVMELVELNPLR-QALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1025 (1433)
Q Consensus 949 r~~-~-~~~~~~~~~~v~~vl~~l~l~~~~-~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~ 1025 (1433)
+.. . -.+....++.+++..+.|++..-. +.. +..||||++|||.||+.|..+|+||+|||||.|.|.-+..+
T Consensus 365 ~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~e 439 (500)
T COG1129 365 RFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAE 439 (500)
T ss_pred hhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHH
Confidence 322 1 234445556788889988885432 222 46799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 1026 VMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 1026 i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|.+++++++++|.+||+++-+. .|+...+|||++|.+ |+++-.
T Consensus 440 Iy~li~~lA~~G~ail~iSSEl-pEll~~~DRIlVm~~-Gri~~e 482 (500)
T COG1129 440 IYRLIRELAAEGKAILMISSEL-PELLGLSDRILVMRE-GRIVGE 482 (500)
T ss_pred HHHHHHHHHHCCCEEEEEeCCh-HHHHhhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999986 488999999999985 888763
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1e-52 Score=535.25 Aligned_cols=200 Identities=20% Similarity=0.291 Sum_probs=157.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +++.+|+|+|+.|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 588999998873 12359999999999999999999999999999999999877 46899998762
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~~LSgGqr 993 (1433)
..+||++|+. ...+++.++.........+. . .++.++++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~-~----~~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFPG-V----PEQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcCC-C----CHHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 34456666643221111111 1 1245678899999973 44443 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE-EEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI-YVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~-y~G~ 1072 (1433)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. . .|||+++|++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999975 46667899999985 7887 7675
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=8.3e-52 Score=504.36 Aligned_cols=221 Identities=26% Similarity=0.313 Sum_probs=172.2
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCC
Q 000541 166 KKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 166 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 245 (1433)
.+.+++++|+|+.+.+|+.++|+|+||||||||||+|+|.+.|+ +|+|...+. -.++|++|++...+..
T Consensus 13 ~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~ 81 (530)
T COG0488 13 YGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEK 81 (530)
T ss_pred eCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCc
Confidence 35678999999999999999999999999999999999999998 999988652 3699999999899999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCCh---HHHH-HHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDI---DVFM-KAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
||.+.+.-+.... .+...++.... ...++.+. +.+. .....++.+.+..++.+|..||++.. ++.++
T Consensus 82 tv~~~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~ 152 (530)
T COG0488 82 TVLDYVIEGFGEL-----RELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS 152 (530)
T ss_pred cHHHHHHhhhHHH-----HHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh
Confidence 9999998765321 12222222111 11111111 1111 11223334556678889999999887 77776
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
.||||||.||+||++|+.+|++|+|||||++||..+...+-+.|++. .+ ++|+++|++...-+.|++|+-
T Consensus 153 -----~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ 222 (530)
T COG0488 153 -----SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILE 222 (530)
T ss_pred -----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEE
Confidence 49999999999999999999999999999999999988888888753 45 677799999999999999999
Q ss_pred ecCCeE-EEecChhHH
Q 000541 402 ISDGQI-VYQGPREHV 416 (1433)
Q Consensus 402 L~~G~i-v~~G~~~~~ 416 (1433)
++.|++ .|.|..+..
T Consensus 223 ld~g~l~~y~Gny~~~ 238 (530)
T COG0488 223 LDRGKLTPYKGNYSSY 238 (530)
T ss_pred ecCCceeEecCCHHHH
Confidence 999987 577766543
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.2e-50 Score=463.92 Aligned_cols=462 Identities=22% Similarity=0.324 Sum_probs=360.3
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc----ceEEEEcCC
Q 000541 163 PSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ----RTAAYISQH 238 (1433)
Q Consensus 163 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~ 238 (1433)
.++.....+++|||+++++||+.+|+|.||||||||+++|.|.++|+ +|+|.++|++..-..|. --||.|.||
T Consensus 11 tK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQH 87 (501)
T COG3845 11 TKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQH 87 (501)
T ss_pred EEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeec
Confidence 34556788999999999999999999999999999999999999998 99999999998655553 358999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
..+++++||.|||..+..-... ..+.+ .+....++.+.+..||+-..|.
T Consensus 88 F~Lv~~lTV~ENiiLg~e~~~~-------~~~~~------------------------~~~~~~i~~l~~~yGl~vdp~~ 136 (501)
T COG3845 88 FMLVPTLTVAENIILGLEPSKG-------GLIDR------------------------RQARARIKELSERYGLPVDPDA 136 (501)
T ss_pred cccccccchhhhhhhcCccccc-------cccCH------------------------HHHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999987642100 00111 1223456778999999999999
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
+|++ ||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|++++. .+.+||.|+|-..|+.+.||+
T Consensus 137 ~V~d-----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDr 209 (501)
T COG3845 137 KVAD-----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADR 209 (501)
T ss_pred eeec-----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCe
Confidence 9986 999999999999999999999999999999999999999999999875 467788899999999999999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCCchhhhhhhhccCCCCccCCHHHHHHHHHhcccchhh
Q 000541 399 IILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTSRKDQEQYWVHKEEPYRFVTVKEFADAFQVFYMGQKV 478 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~~~~~ 478 (1433)
+.||..|+++..-++ . + ..+.+++++
T Consensus 210 vTVLR~Gkvvgt~~~--~--------------~---------------------------~~t~~ela~----------- 235 (501)
T COG3845 210 VTVLRRGKVVGTVDP--V--------------A---------------------------ETTEEELAE----------- 235 (501)
T ss_pred eEEEeCCeEEeeecC--C--------------C---------------------------CCCHHHHHH-----------
Confidence 999999998643210 0 0 000011000
Q ss_pred hhhhcCccccccccccccccCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccc
Q 000541 479 GDELRIPFDKRKSHRAALTTKIYGVSKKELLKACMSRELLLMKRNSFVYIFKLCQLTIMGLVAMTLFFRTKMHRDSITDG 558 (1433)
Q Consensus 479 ~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gtlf~~~~~~~~~~~~~ 558 (1433)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHhhhcchhhHhhhcCCcccchhHHHHHHHHHhhHHHHHHHHHhhhhhhccCccccHh
Q 000541 559 VIYTGALFFIVLMIMFNGMAEIPMTIAKLPIFYKQRDLRFYPSWAYALSTWILKIPISYIEVAVWVFLTYYVIGFDPNVG 638 (1433)
Q Consensus 559 ~~~~g~lff~il~~~~~~~~e~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 638 (1433)
+ |+|=.
T Consensus 236 -------------l---------------------------------------------------------MvG~~---- 241 (501)
T COG3845 236 -------------L---------------------------------------------------------MVGRE---- 241 (501)
T ss_pred -------------H---------------------------------------------------------hcCCc----
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHhHHHHHHHHHHHhcccccccchhhhHHHHHhHChHHHHHHHHHHH
Q 000541 639 RLFRQYLLLLFLNQMASALFRLIAATGRNIVVANTFGSFALLLLFVLGGFVLSREDIKKWWIWAYWCSPLMYAQNAIVVN 718 (1433)
Q Consensus 639 ~ff~~~ll~~l~~~~~~~lf~~i~a~~~~~~~a~~~~~~~~~~~~l~~Gf~i~~~~i~~~~~W~~~isP~~y~~~al~~n 718 (1433)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T COG3845 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCCCchHHHHhhccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccccccc
Q 000541 719 EFLGNSWRKVLPNTTEPLGVQVLKSRGFFTDAYWYWLGLGALAGFILLFNFGFTLALSFLNPFGKNQAVISQESQSNEHD 798 (1433)
Q Consensus 719 ef~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~~g~l~g~~i~f~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~ 798 (1433)
+.
T Consensus 242 ---------v~--------------------------------------------------------------------- 243 (501)
T COG3845 242 ---------VV--------------------------------------------------------------------- 243 (501)
T ss_pred ---------cc---------------------------------------------------------------------
Confidence 00
Q ss_pred CCCCCccccccCCCcchhhhhccccccCccccCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEE
Q 000541 799 NRTGGTIQLSTSGRSKAEVKANHHKKRGMVLPFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTA 878 (1433)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 878 (1433)
... . .. .. .| .+..++++|++...+. ....+++|||+++.||++|
T Consensus 244 --------~~~------~-~~--~~-----~p-g~~vL~V~~L~v~~~~------------~~~~v~~vs~~Vr~GEIvG 288 (501)
T COG3845 244 --------LRV------V-KP--PS-----TP-GEVVLEVEDLSVKDRR------------GVTAVKDVSFEVRAGEIVG 288 (501)
T ss_pred --------ccc------c-cC--CC-----CC-CCeEEEEeeeEeecCC------------CCceeeeeeeEEecCcEEE
Confidence 000 0 00 00 00 1235778888764321 1357999999999999999
Q ss_pred EeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC----Ccc-cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcC
Q 000541 879 LMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK----KQE-TFARISGYCEQND---IHSPNVTVYESLLYSAWLRL 950 (1433)
Q Consensus 879 i~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~----~~~-~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~ 950 (1433)
|.|..|-|-+.|+.+|+|..+ +.+|+|.++|.+. +.. ..+..++|||.|. -+.+.+|+.||+.+...-+-
T Consensus 289 IAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~ 366 (501)
T COG3845 289 IAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKK 366 (501)
T ss_pred EEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhcccc
Confidence 999999999999999999876 3469999999986 222 2234689999985 34689999999977643221
Q ss_pred CC----CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHH
Q 000541 951 PL----EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1026 (1433)
Q Consensus 951 ~~----~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i 1026 (1433)
|. -.+....+++.+++++.++.....-.. ..+.||||++||+-+||||.++|++|+..+||.|||..+.+.|
T Consensus 367 ~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I 442 (501)
T COG3845 367 PFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFI 442 (501)
T ss_pred ccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHH
Confidence 11 234456677888999998886332211 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1027 MRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1027 ~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
.+.|.+.++.|+.|++++-+.+ ++++++|++.+|.+ |+++...++.
T Consensus 443 ~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 443 HERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred HHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 9999999999999999999986 79999999999995 8998877764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-44 Score=371.56 Aligned_cols=227 Identities=26% Similarity=0.429 Sum_probs=192.2
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC----cccceEEEEcC
Q 000541 162 LPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF----VPQRTAAYISQ 237 (1433)
Q Consensus 162 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q 237 (1433)
+.+..++..+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|
T Consensus 8 l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ 84 (240)
T COG1126 8 LSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQ 84 (240)
T ss_pred eeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecc
Confidence 345566788999999999999999999999999999999999999998 99999999765321 23578999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccc
Q 000541 238 HDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCAD 317 (1433)
Q Consensus 238 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 317 (1433)
+.++||++||.||+..+...- ...++ .++......+|+.+||.+.+|
T Consensus 85 ~fnLFPHlTvleNv~lap~~v---------~~~~k------------------------~eA~~~A~~lL~~VGL~~ka~ 131 (240)
T COG1126 85 QFNLFPHLTVLENVTLAPVKV---------KKLSK------------------------AEAREKALELLEKVGLADKAD 131 (240)
T ss_pred cccccccchHHHHHHhhhHHH---------cCCCH------------------------HHHHHHHHHHHHHcCchhhhh
Confidence 999999999999999875321 01111 123344567899999999988
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
... ..|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++ .+.|.+.++|....+.+.+|
T Consensus 132 ~yP-----~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~Vad 204 (240)
T COG1126 132 AYP-----AQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREVAD 204 (240)
T ss_pred hCc-----cccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHhhh
Confidence 665 46999999999999999999999999999999999999999999999986 35777779999999999999
Q ss_pred eEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHh
Q 000541 398 DIILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQE 439 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~e 439 (1433)
||+.|++|+++.+|+++++ |..|.+....+|+..
T Consensus 205 rviFmd~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 205 RVIFMDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eEEEeeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999999999887 345666666677654
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-43 Score=364.84 Aligned_cols=214 Identities=26% Similarity=0.367 Sum_probs=187.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|++.++ ++.++|+|||++|++||+++|+|||||||||||++|.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6788888776 35689999999999999999999999999999999999987 56999999997543
Q ss_pred c----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 Q----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
. ...|+.+|+|+|+..+||++||.||+..+-..- ...++++.++...++|+.+||.+.+|.. ...||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2 346788999999999999999999998864322 2345667777888999999999988876 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|||||+|||||+.+|+++++|||||.|||+....+.+.+++++++|.|.||+||.... .-+.+||++.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999998543 4567899999985 8999999
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.7e-41 Score=392.44 Aligned_cols=203 Identities=19% Similarity=0.262 Sum_probs=158.8
Q ss_pred ceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCc
Q 000541 833 PHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGY 912 (1433)
Q Consensus 833 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~ 912 (1433)
|..+.++|+++.++. +..++++++|-+.+++.+|++|||||||||||+++.|... +..|.|.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 346899999998752 2258999999999999999999999999999999999887 45787754332
Q ss_pred cCCcccccceEEEeccC--CCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 913 PKKQETFARISGYCEQN--DIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 913 ~~~~~~~~~~~gyv~Q~--d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ..++-.|+ +.+.-..++-|+++=. ..++.+.+.+..++..+||..-.+... .+.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVP----MSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccc----hhhccc
Confidence 1 22344443 3344456777776421 111334556788899999985444331 568999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||+||.+|+.++..|.||+|||||+|||..+...+.+.|.+. ..+||.++||-. -|-+..+++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfr-lI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFR-LISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhh-HHHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999988876 458999999864 366778999999999999998
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 875
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-41 Score=392.51 Aligned_cols=224 Identities=32% Similarity=0.455 Sum_probs=194.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|++..+. .++.+|+||||+|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeC
Confidence 366788887763 13679999999999999999999999999999999999988 4699999999876
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 915 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
.. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. ...+++++++++.++|.+.++.. +++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHH
Confidence 54 4567789999999999999999999999999986543 34566799999999999855544 46899999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||+||+||+++|++|||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|.+ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999985 67777999999985 8999999
Q ss_pred CCCcChhHHHHHHhh
Q 000541 1072 SLGRHSSHLIKYFEG 1086 (1433)
Q Consensus 1072 ~~~~~~~~~~~yF~~ 1086 (1433)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 76 345555543
No 49
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.6e-36 Score=410.13 Aligned_cols=216 Identities=22% Similarity=0.365 Sum_probs=186.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|+++.++. +++.+|+|+|+.+++||+++|+|||||||||||++|+|... +.+|+|.++|++
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46899999987731 13569999999999999999999999999999999999987 569999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 914 KKQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 914 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. .+.++.++.++++++.++|.+..++.+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876652 223344567889999999998877764 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|||||+||+||+.+|+||+|||||+|||+.++..+++.|+++. +|+|||+++|+++ ++...+|++++|.+ |++++.|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999964 45667899999985 8999999
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 85
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6e-41 Score=355.74 Aligned_cols=231 Identities=28% Similarity=0.413 Sum_probs=198.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.+++++|+.+. +.+.|++|||++|++||+++||||||+||||||+.|.|..+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 58899998765 45789999999999999999999999999999999999988 5699999999986
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000541 915 KQE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGVSG 987 (1433)
Q Consensus 915 ~~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~~~ 987 (1433)
.+. ..++.+|+++|+-.+|..+||+||+.|.. |-....+++..++.+..-++.+||... .+.. .+.
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 431 35678999999999999999999998854 333445666777778788888999876 4543 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||+|||+++||||+.+|+|||+||||+||||.++..+-++|+++.++ |.|+|++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877 999999999975 68899999999996 89
Q ss_pred EEEEcCCCc----ChhHHHHHHhhCCC
Q 000541 1067 EIYVGSLGR----HSSHLIKYFEGIRG 1089 (1433)
Q Consensus 1067 ~~y~G~~~~----~~~~~~~yF~~~~g 1089 (1433)
++..|++.+ ...-+.+||.+..+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 999999743 12346778887643
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-41 Score=366.38 Aligned_cols=218 Identities=27% Similarity=0.401 Sum_probs=186.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ .+ .+|+|||+++++|++++|+||||||||||+++|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 588999999885 12 59999999999999999999999999999999999877 5699999999886
Q ss_pred CcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 915 KQETFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
.+..-+..+|||||... ....+||+|-+..+..-+.+. ....+..++.++++|+.+|+.+++|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 65443568999999642 234479999998764333221 11123336779999999999999999875 69999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|+|||-|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999999999999999987 5889999999997 5899999
Q ss_pred CCCc
Q 000541 1072 SLGR 1075 (1433)
Q Consensus 1072 ~~~~ 1075 (1433)
++..
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9854
No 52
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-41 Score=366.94 Aligned_cols=225 Identities=28% Similarity=0.390 Sum_probs=195.4
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHDN 240 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 240 (1433)
+...+|+|||+.|++|++.+|+|+||||||||++++.++..|+ +|+|.++|+++..... ++.||+|+|+.+
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999998 9999999988766542 467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
++...||.||++|+.+..+.. + .+...++.++|+.+||++.+|...
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------k------------------------~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------K------------------------AEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhccCc
Confidence 999999999999998876531 1 123345778999999999887655
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
.+|||||||||+|||||+.+|+||+.|||||+|||.|+..|++.|+++.+.. +.||+.|+|.++-+.+.||+|.
T Consensus 140 -----~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 140 -----AQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred -----hhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 4699999999999999999999999999999999999999999999987755 6778889999999999999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhCC
Q 000541 401 LISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVTS 442 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evts 442 (1433)
+|++|+++++|+..++. ..|.+.-..+|+.+...
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhcc
Confidence 99999999999999883 45666556666665543
No 53
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.7e-41 Score=369.71 Aligned_cols=218 Identities=29% Similarity=0.430 Sum_probs=188.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++.+|+++.|+ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|+++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367899999884 4579999999999999999999999999999999999887 5689999999986
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. +.++|.++|+||.....+.+||+|.+.++..-.... ....++.++.++++++.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 457789999999998889999999998874322111 1122334457899999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||+.|||||+++|+||+||||||+||...+..++++++++++ +|+|||+++||++. ....+|++++|++ |++++
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999995 49999999999874 6778899999985 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99975
No 54
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-41 Score=366.73 Aligned_cols=219 Identities=25% Similarity=0.345 Sum_probs=190.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+++++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++.. |.+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5788888665321 1124579999999999999999999999999999999999887 56999999997654
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
. ...|+.+|+++|+..++.+.||+||+.|...+.. .++++++++|.++++.+||.+.++.. ..+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 2457889999999999999999999999877653 56788899999999999999888775 35899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
|||||||+|||||+.+|+||++|||||.|||.+...|+++|+++.++ |.||++++|+++ -+-..|||+.+|.+ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999866 999999999853 24566899999985 8999
Q ss_pred EEcCCC
Q 000541 1069 YVGSLG 1074 (1433)
Q Consensus 1069 y~G~~~ 1074 (1433)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999863
No 55
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-41 Score=355.07 Aligned_cols=215 Identities=27% Similarity=0.425 Sum_probs=189.2
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCC
Q 000541 163 PSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHD 239 (1433)
Q Consensus 163 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 239 (1433)
+++..++++++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||.++.+... ++.+|||-|.-
T Consensus 8 sk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqi 84 (309)
T COG1125 8 SKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQI 84 (309)
T ss_pred ehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhc
Confidence 34455778999999999999999999999999999999999999998 9999999999877654 68899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+||++||.||+.+-..++++.. ++.+.+++++|+.+||+.. .
T Consensus 85 gLFPh~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~ 127 (309)
T COG1125 85 GLFPHLTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---E 127 (309)
T ss_pred ccCCCccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---H
Confidence 99999999999999877765421 1233457889999999752 1
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
..+++.+.|||||+|||.+||||+.+|+|++||||+++|||-++.++-+.++++.+.. ++|||.++|+.+|++.++|||
T Consensus 128 ~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri 206 (309)
T COG1125 128 YADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRI 206 (309)
T ss_pred HhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceE
Confidence 2346677899999999999999999999999999999999999999999999986655 567777999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
.+|++|+++..+++++++.
T Consensus 207 ~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 207 AVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred EEecCCeEEEeCCHHHHHh
Confidence 9999999999999999874
No 56
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-40 Score=381.93 Aligned_cols=217 Identities=31% Similarity=0.460 Sum_probs=194.3
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc-ceEEEEcCCCCCCCCCCHHH
Q 000541 171 ILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 249 (1433)
Q Consensus 171 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 249 (1433)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998775 78999999999999999999
Q ss_pred HHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCc
Q 000541 250 TLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGIS 329 (1433)
Q Consensus 250 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 329 (1433)
||.|+.+.++.. .++.+.+++++.+.|+|++..|.+. ++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~P-----~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRKP-----LQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 999999876531 1123456778999999999988665 4699
Q ss_pred hhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000541 330 GGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVY 409 (1433)
Q Consensus 330 GGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 409 (1433)
|||||||++||||+.+|++++||||+|.||+..+.++...++++.+.. ++|+|.++|+..|+..++|+|.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l-~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERL-GTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhc-CCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999975544 6777779999999999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChhhHHH
Q 000541 410 QGPREHVLEFFKFMGFECPKRKGVADFLQ 438 (1433)
Q Consensus 410 ~G~~~~~~~~f~~~G~~~p~~~~~adfl~ 438 (1433)
.|++.++. ..|.+.-+|+|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4677777777763
No 57
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-41 Score=384.19 Aligned_cols=227 Identities=30% Similarity=0.449 Sum_probs=200.2
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCC
Q 000541 164 SRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHI 242 (1433)
Q Consensus 164 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~ 242 (1433)
+..+...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+|
T Consensus 13 k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALF 89 (352)
T COG3842 13 KSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALF 89 (352)
T ss_pred eecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccC
Confidence 3345678999999999999999999999999999999999999998 9999999999998776 47899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
|+|||+||+.|+.+.++... ..+...+++++|+.++|++.++..+
T Consensus 90 PHltV~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~R~p-- 134 (352)
T COG3842 90 PHMTVEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFADRKP-- 134 (352)
T ss_pred CCCcHHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhhhCh--
Confidence 99999999999987432110 0123346788999999998776554
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
..|||||||||+|||||+.+|++|+||||.|+||..-+.++..-++++.+.. +.|.|.++|+..|+..++|+|.+|
T Consensus 135 ---~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm 210 (352)
T COG3842 135 ---HQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVM 210 (352)
T ss_pred ---hhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEc
Confidence 5699999999999999999999999999999999999999999999988766 667777999999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhh
Q 000541 403 SDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEV 440 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~ev 440 (1433)
++|+|.-.|+++++ |..|...-+|+|+-+.
T Consensus 211 ~~G~I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 211 NDGRIEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred cCCceeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 99999999999998 5578888889998754
No 58
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.1e-40 Score=365.73 Aligned_cols=211 Identities=33% Similarity=0.475 Sum_probs=182.6
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc---ceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ---RTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 244 (1433)
++.+|+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+...+ +.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 567999999999999999999999999999999999999997 99999999999876653 789999999888899
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+|-+.++..-. .......+ .+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~-----~~~~~~~~-------------------------~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPH-----LGLFGRPS-------------------------KEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCcc-----cccccCCC-------------------------HhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 99999999874310 00000001 1112357788999999999987776
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||.|||||+++|++++||||||+||...+.++++.++++++. .+.|+|+++|+.+.+..+||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~-~~~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNRE-KGLTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999999864 456677789999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|+++.+|+++++.
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 59
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=356.53 Aligned_cols=204 Identities=25% Similarity=0.372 Sum_probs=180.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.+.++++++.+. ...+|+|+|++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 467888887764 2579999999999999999999999999999999999988 5699999999987
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
. .....+|||+|++.++|-+||+||+.++...+. .+++++++++++.++.+||.+..|.. ...|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 3 234568999999999999999999999876653 34566677899999999999999886 4589999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|..+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999875 4899999999975 677789999999864
No 60
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=362.69 Aligned_cols=227 Identities=29% Similarity=0.449 Sum_probs=190.7
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCc---cCCCCcc-cceEEEEcCCC
Q 000541 164 SRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGH---DMDEFVP-QRTAAYISQHD 239 (1433)
Q Consensus 164 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d 239 (1433)
+......+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||. +.+.... .|.+|||+|+-
T Consensus 10 ~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~Y 86 (345)
T COG1118 10 KRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHY 86 (345)
T ss_pred hhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEech
Confidence 3445567899999999999999999999999999999999999998 999999999 6555333 47899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+|++|||.+||+|+.+++.. .+.+ .+.+..++++|+.+.|++.++
T Consensus 87 ALF~HmtVa~NIAFGl~~~~~-----~p~~---------------------------~~~r~rv~elL~lvqL~~la~-- 132 (345)
T COG1118 87 ALFPHMTVADNIAFGLKVRKE-----RPSE---------------------------AEIRARVEELLRLVQLEGLAD-- 132 (345)
T ss_pred hhcccchHHhhhhhccccccc-----CCCh---------------------------hhHHHHHHHHHHHhcccchhh--
Confidence 999999999999999876521 0001 122345677899999987665
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+++..|||||||||++||||+..|++|+||||+++||...+.++-+.|+++.+..+ .+.+.++|+.+|++++||+|
T Consensus 133 ---ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrv 208 (345)
T COG1118 133 ---RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRV 208 (345)
T ss_pred ---cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceE
Confidence 55678999999999999999999999999999999999999999999999876554 45555999999999999999
Q ss_pred EEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHh
Q 000541 400 ILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQE 439 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~e 439 (1433)
++|++|+|...||++|+. ..|...-+..|+-+
T Consensus 209 vvl~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 209 VVLNQGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred EEecCCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 999999999999999984 34555555555544
No 61
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.9e-40 Score=379.48 Aligned_cols=217 Identities=33% Similarity=0.469 Sum_probs=188.5
Q ss_pred ccccc-cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC--cccceEEEEcCCC
Q 000541 163 PSRKK-HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF--VPQRTAAYISQHD 239 (1433)
Q Consensus 163 ~~~~~-~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d 239 (1433)
.++.+ ++++|+|||+.|++|++++|+||||||||||||+|+|.+.|+ +|+|.++|.+.... ..++.+||++|++
T Consensus 11 ~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~ 87 (293)
T COG1131 11 TKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEP 87 (293)
T ss_pred EEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCC
Confidence 34455 588999999999999999999999999999999999999997 99999999887652 3357899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+++.+||+|||.|.+++.+... ......++.+++.+||++..++.
T Consensus 88 ~~~~~lT~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~ 133 (293)
T COG1131 88 SLYPELTVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKANKK 133 (293)
T ss_pred CCCccccHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhCcc
Confidence 99999999999999998875421 01123467899999999855544
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ ++||+||||||+||.||+++|+++||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+||+|
T Consensus 134 ~-----~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v 207 (293)
T COG1131 134 V-----RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRV 207 (293)
T ss_pred h-----hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEE
Confidence 4 569999999999999999999999999999999999999999999999864 4467777899999999999999
Q ss_pred EEecCCeEEEecChhHHHHHHHh
Q 000541 400 ILISDGQIVYQGPREHVLEFFKF 422 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~~f~~ 422 (1433)
++|++|++++.|+.+++...+..
T Consensus 208 ~il~~G~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 208 IILNDGKIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEeCCEEEEeCCHHHHHHhhcc
Confidence 99999999999999998776543
No 62
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.8e-40 Score=355.49 Aligned_cols=209 Identities=29% Similarity=0.447 Sum_probs=175.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++||+..+.... ....+|++||+.|++||++||||||||||||||++|.|... +.+|.|.++|.+..
T Consensus 2 i~~~~v~k~y~~~~---------~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~ 70 (226)
T COG1136 2 IELKNVSKIYGLGG---------EKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLT 70 (226)
T ss_pred cEEeeeEEEeccCC---------cceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcC
Confidence 34677776654321 22579999999999999999999999999999999999987 46999999997654
Q ss_pred c------ccc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccc-ccccCCCCCC
Q 000541 916 Q------ETF-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQ-ALVGLPGVSG 987 (1433)
Q Consensus 916 ~------~~~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~-~~vg~~~~~~ 987 (1433)
. ..+ ++.+|||+|+..+.|++||+||+.....+..- ....+++.++++++.+||.+..+ .. +..
T Consensus 71 ~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~e 142 (226)
T COG1136 71 KLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSE 142 (226)
T ss_pred cCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chh
Confidence 2 123 35699999999999999999999987655422 22255677889999999986655 43 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
|||||||||+|||||+.+|+||+.||||.+||+.++..|++++++++++ |+|||++|||| ++...+||++.|.+ |+
T Consensus 143 LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 143 LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 9999999999999999999999999999999999999999999999866 99999999986 57889999999997 45
No 63
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-40 Score=350.62 Aligned_cols=213 Identities=25% Similarity=0.370 Sum_probs=190.0
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++|+||+..+. ++.+++|+|++|++||++.++|||||||||+|++|.++.+ +.+|+|++||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 57889887763 4579999999999999999999999999999999999988 56999999999875
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP--LRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~vg~~~~~~LSg 990 (1433)
. ..+||.+|||-|.-.+||++||.||+.+.-.+. ..++++.+++++|+++.+||.+ ++++. ...|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 357889999999999999999999998765443 4567888899999999999975 56654 468999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||+|||.+||||+++|+||+||||++.|||.++..+++.++++.++ |+|||++|||.+ +.+.+.|++.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999999766 999999999975 6788999999998 589999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
+|++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 9886
No 64
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-40 Score=348.61 Aligned_cols=220 Identities=27% Similarity=0.347 Sum_probs=186.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++||+..++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.+||.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478999988774 34689999999999999999999999999999999999776 5689999999764
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCChhHHHHHHHHHHHHcCCcccccccccCC
Q 000541 915 KQ------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-----LEVDSPTRKMFIEEVMELVELNPLRQALVGLP 983 (1433)
Q Consensus 915 ~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-----~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~ 983 (1433)
.. ..+++.+||++|+..+.+.+||.||++.+..-+.+ .....++.+..+-+.++.+|+.+.+-+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 24567899999999999999999999876432222 12333444556678899999998877664
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
..|||||+|||+|||+|+++|+||+.|||+++|||.++..||+.|++++++ |.|||++.||.+. ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 479999999999999999999999999999999999999999999999854 9999999999653 467899999998
Q ss_pred cCcEEEEEcCCCc
Q 000541 1063 RGGQEIYVGSLGR 1075 (1433)
Q Consensus 1063 ~gG~~~y~G~~~~ 1075 (1433)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-39 Score=346.08 Aligned_cols=213 Identities=25% Similarity=0.363 Sum_probs=182.6
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCC
Q 000541 165 RKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQH 238 (1433)
Q Consensus 165 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~ 238 (1433)
+.+.++||+|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.+.|+++..... ++.+|+++|+
T Consensus 17 ~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~ 93 (263)
T COG1127 17 SFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQ 93 (263)
T ss_pred ecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeec
Confidence 346678999999999999999999999999999999999999998 9999999999866543 3679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
-.+|..+||+||+.|..+-... +++. ..+..+..-|+..||...
T Consensus 94 gALFssltV~eNVafplre~~~---------lp~~------------------------~i~~lv~~KL~~VGL~~~--- 137 (263)
T COG1127 94 GALFSSLTVFENVAFPLREHTK---------LPES------------------------LIRELVLMKLELVGLRGA--- 137 (263)
T ss_pred cccccccchhHhhheehHhhcc---------CCHH------------------------HHHHHHHHHHHhcCCChh---
Confidence 9999999999999998753321 1111 122334455788899864
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
+.+.+...||||++||++||||++.+|+++|+||||+||||.++..+.+.++++.+..+ .|+++++|+.++++..+|+
T Consensus 138 -~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Dr 215 (263)
T COG1127 138 -AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADR 215 (263)
T ss_pred -hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhce
Confidence 23456678999999999999999999999999999999999999999999999987764 5566699999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000541 399 IILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~ 418 (1433)
|++|.+|+|+.+|+++++.+
T Consensus 216 v~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 216 VAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEEeCCEEEEeCCHHHHHh
Confidence 99999999999999999864
No 66
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=339.17 Aligned_cols=202 Identities=29% Similarity=0.385 Sum_probs=183.8
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc--ccccceEEEeccCCCCCCCCCH
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ--ETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
.++++||||+++.||++||+|+|||||||+|++|++... |.+|.|++||.+... ...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 358999999999999999999999999999999999988 569999999987533 4567889999987888999999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
+|||.|.+.+. ++...+.+++.+++.+.|+|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999885 45567778899999999999999999875 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1019 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
|..+...+.+.++++.++|++||+++|..+ ++-++||++++|.+ |++++.|++.
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999999999999999863 66669999999986 8999999873
No 67
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-39 Score=331.91 Aligned_cols=213 Identities=27% Similarity=0.376 Sum_probs=184.3
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.|+||+..|+. .+.+|+||||++++||++-|+|||||||||||++|.+... +..|+|+++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 678899877752 2569999999999999999999999999999999999877 56899999999864
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
. .-.+|.+|+|+||..+.+..||+||+.|..... ..+..+.++++.++|+.+||.+.++.+ ...||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 135788999999999999999999999987654 334566778899999999999888776 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhc-ceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFD-ELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd-~~~ll~~gG~~~ 1068 (1433)
|||+|||+||||++.+|++|+.||||.+||+..+..|++++.++.+.|.|||+.||+ .++.+... +++.|. .|+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd--~~lv~~~~~rvl~l~-~Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHD--LELVNRMRHRVLALE-DGRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEecc--HHHHHhccCcEEEEe-CCEEE
Confidence 999999999999999999999999999999999999999999999999999999997 46666665 566665 58998
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 76654
No 68
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=350.19 Aligned_cols=194 Identities=25% Similarity=0.380 Sum_probs=171.1
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 246 (1433)
...++|+|||++|++||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|-+|
T Consensus 14 ~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~T 88 (248)
T COG1116 14 GGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLT 88 (248)
T ss_pred CceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhh
Confidence 3367999999999999999999999999999999999999998 999999999883 35678999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.|+.+.++... . +....++..|+.+||.+..|.. .+
T Consensus 89 v~~NV~l~l~~~~~~~----------~------------------------e~~~~a~~~L~~VgL~~~~~~~-----P~ 129 (248)
T COG1116 89 VLDNVALGLELRGKSK----------A------------------------EARERAKELLELVGLAGFEDKY-----PH 129 (248)
T ss_pred HHhhheehhhccccch----------H------------------------hHHHHHHHHHHHcCCcchhhcC-----cc
Confidence 9999999987664211 0 1122467789999999887754 45
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.|++.++|+.+|+..++|||++|+++
T Consensus 130 qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 130 QLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 799999999999999999999999999999999999999999999988765 567777999999999999999999984
No 69
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-39 Score=351.10 Aligned_cols=208 Identities=26% Similarity=0.440 Sum_probs=177.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCC--CCCCCCCH
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTV 247 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 247 (1433)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..+|||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 5999999999999999999999999999999999999998 999999999887766667899999953 33445799
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+|.+..+..-+ ........++ ....++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~-----~g~~~~~~~~-------------------------d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGK-----KGWFRRLNKK-------------------------DKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCccc-----ccccccccHH-------------------------HHHHHHHHHHHcCchhhhCCcccc-----
Confidence 99999873211 1111111111 124578899999999999999986
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|.+.|+++.+. +.+|++++|+...+.++||+|+.|+. ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999999764 67788899999999999999999965 68
Q ss_pred EEecChhHHHH
Q 000541 408 VYQGPREHVLE 418 (1433)
Q Consensus 408 v~~G~~~~~~~ 418 (1433)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999998753
No 70
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=353.56 Aligned_cols=205 Identities=29% Similarity=0.431 Sum_probs=184.7
Q ss_pred ceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCc---cCCc-ccccceEEEeccCCCCCCC
Q 000541 860 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGY---PKKQ-ETFARISGYCEQNDIHSPN 935 (1433)
Q Consensus 860 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~---~~~~-~~~~~~~gyv~Q~d~~~~~ 935 (1433)
...+++|||+.|+.||++|++|||||||||||++|+|+.+ +..|.|.+||. +.+. ..-.|.+|||+|+..+|+.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999988 56999999998 5443 2345789999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000541 936 VTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1015 (1433)
Q Consensus 936 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPT 1015 (1433)
+||.||+.|+.+++ ....++.+.+.+++++|+.+.|+++.+.. ...|||||||||++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998777 33345667788899999999999999876 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1016 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1016 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
++||+.-+..+.+.|+++.++ |.|+|++|||+. +..+.+|++++|++ |++.-.|+..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999984 89999999999986 8999999873
No 71
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-39 Score=367.50 Aligned_cols=215 Identities=27% Similarity=0.408 Sum_probs=193.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|++..+. +..+|+|+|++|++||.++|+|||||||||||++|||+.. +.+|+|.|+|.++
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578899987763 1229999999999999999999999999999999999987 5699999999988
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
+. ...+|.+++|+|+..++|++||+||+.|+.+++ ..++++.+++++++.+.|++.++.|++ .+.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 76 345688999999999999999999999998776 345677888999999999999999987 358999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||. .+...++|++++|. +|++.-.|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq-~EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQ-VEAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCH-HHHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 89999999996 58888999999999 599999998
Q ss_pred CC
Q 000541 1073 LG 1074 (1433)
Q Consensus 1073 ~~ 1074 (1433)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 73
No 72
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-39 Score=340.11 Aligned_cols=217 Identities=25% Similarity=0.354 Sum_probs=181.4
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHDN 240 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 240 (1433)
.++++|+|||+.|++||+++|+|||||||||||++|.|..+++ +|+|.+||.++..... ++.+||++|+.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 5678999999999999999999999999999999999999988 9999999988765542 367999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
+.+.+||.+|+..+..-+.. .-....++.+. +....+-..|+.+|+.+.+.++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~s-----------~~~slfglfsk---------------~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYTS-----------TWRSLFGLFSK---------------EDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccch-----------HHHHHhCCCCH---------------HHHHHHHHHHHHcCcHHHHHHHh
Confidence 99999999999987532210 00011111111 11123345789999999988887
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
++ |||||+|||+|||||+.+|++++-|||+++||+.++.++++.|++++...+ .|+++.+|..+-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g-~Tvi~nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDG-ITVIVNLHQVDLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHHhhhe
Confidence 74 999999999999999999999999999999999999999999999987654 555556788899999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 000541 401 LISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~~ 418 (1433)
-|++|+|+|+||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999998754
No 73
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-39 Score=330.64 Aligned_cols=207 Identities=30% Similarity=0.377 Sum_probs=183.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..... .++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345999999999999999999999999999999999999998 999999999875432 357899999878899999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.|.+++.+. .+. +.+..++.+.+.|+|.+|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l----------~~~------------------------~~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGL----------SRK------------------------EIKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhh----------hhh------------------------HHHHHHHHHHHHhChHHHHHHHHhh---
Confidence 999999999887543 111 2234567789999999999999985
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+|-|+||||+|||||+.+|++++|||||||||-.+...+-+.++++.. .+.+|+..+|..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecC
Confidence 999999999999999999999999999999999999999999998743 3677778899999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999988764
No 74
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-38 Score=368.13 Aligned_cols=214 Identities=28% Similarity=0.428 Sum_probs=187.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 588999998773 2469999999999999999999999999999999999887 5689999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 915 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
.. ...++.+||++|+..+++.+||+|++.|.+.++. .+..+...+++++++.+++.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2346789999999999999999999998776531 233344556789999999988877764 4799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999975 56778999999986 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-39 Score=333.47 Aligned_cols=223 Identities=26% Similarity=0.398 Sum_probs=179.4
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCCc-----ccceEEEEcCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQHD 239 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 239 (1433)
+++.+|+|||+.|+++++||++|||||||||||++|..+.+ +..+++|+|.++|+++-+.. .++.+|.|+|.+
T Consensus 18 g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkP 97 (253)
T COG1117 18 GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKP 97 (253)
T ss_pred CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCC
Confidence 45679999999999999999999999999999999988754 45678999999999986542 358899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc-cccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV-CADT 318 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt 318 (1433)
+-|| +|++||+.|+.+..|... .++. .+++..|+.-+|-+ ..|.
T Consensus 98 nPFp-~SIydNVayG~r~~g~~~-~~ld---------------------------------eiVe~sLk~AaLWdEVKDr 142 (253)
T COG1117 98 NPFP-MSIYDNVAYGLRLHGIKD-KELD---------------------------------EIVESSLKKAALWDEVKDR 142 (253)
T ss_pred CCCC-chHHHHHHHhHHhhccch-HHHH---------------------------------HHHHHHHHHhHhHHHhHHH
Confidence 9999 999999999999887633 1111 12222233333321 1111
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
. ++...+|||||+||++|||||+-+|+||+||||||+|||-++..|-+.+.++.+ .-|||.++|.+.++.+..|+
T Consensus 143 L--~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~ 217 (253)
T COG1117 143 L--HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDY 217 (253)
T ss_pred h--hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHh
Confidence 1 122347999999999999999999999999999999999999999999999853 45666799999999999999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHH
Q 000541 399 IILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFL 437 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl 437 (1433)
...+..|+++++|+.+++ |..|.++...||+
T Consensus 218 taFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 218 TAFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 999999999999999987 3456666666654
No 76
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-38 Score=341.56 Aligned_cols=195 Identities=28% Similarity=0.440 Sum_probs=167.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 241 (1433)
.++|+|||+.|++||+++|+|||||||||||++|+|...|+ +|+|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999988876542 2579999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccc-ccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCAD-TMV 320 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d-t~v 320 (1433)
+|++||+||+.+++...+...+ ......+.+++.+||.+..+ ..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999998766543110 01233567899999987655 444
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
..|||||||||+|||||+.+|++++.||||.+||+.++..+++.++++++. .++|+++++|+. ++...|||++
T Consensus 141 -----~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~-~g~tii~VTHd~-~lA~~~dr~i 213 (226)
T COG1136 141 -----SELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKE-RGKTIIMVTHDP-ELAKYADRVI 213 (226)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHh-cCCEEEEEcCCH-HHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998764 466777788875 6778999999
Q ss_pred EecCCeE
Q 000541 401 LISDGQI 407 (1433)
Q Consensus 401 lL~~G~i 407 (1433)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999994
No 77
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=366.51 Aligned_cols=217 Identities=26% Similarity=0.386 Sum_probs=193.6
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|++..+. +..+|+|+|++|++||+++|+|||||||||||++|||... +.+|+|.++|++
T Consensus 4 ~~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~ 68 (352)
T COG3842 4 PALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGED 68 (352)
T ss_pred ceEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEE
Confidence 3588999987763 4579999999999999999999999999999999999988 569999999998
Q ss_pred CCcc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 914 KKQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 914 ~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
+... ..+|.+|+|+|+-.+||++||+||+.|+.+++ ....+++.+++++++++.++|.+.+++.. ..|||||
T Consensus 69 i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQ 141 (352)
T COG3842 69 ITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQ 141 (352)
T ss_pred CCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHH
Confidence 8653 45788999999999999999999999997643 23345667789999999999999988874 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||||+.+|++|+||||.|+||..-+..+..-|+++.++ |.|.|++|||.. +...+.||+.+|++ |++.-.|
T Consensus 142 qQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~g 219 (352)
T COG3842 142 QQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVG 219 (352)
T ss_pred HHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecC
Confidence 99999999999999999999999999999999999999998755 999999999964 78889999999985 8999999
Q ss_pred CCC
Q 000541 1072 SLG 1074 (1433)
Q Consensus 1072 ~~~ 1074 (1433)
++.
T Consensus 220 tP~ 222 (352)
T COG3842 220 TPE 222 (352)
T ss_pred CHH
Confidence 874
No 78
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-38 Score=327.03 Aligned_cols=218 Identities=23% Similarity=0.323 Sum_probs=185.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC---CCeeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~---~~~~~G~I~i~ 910 (1433)
..++++|++..|. ++++|+|||+.|++++++|+||||||||||||++|..... +-..+|+|.++
T Consensus 6 ~~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 3578899998774 4679999999999999999999999999999999987533 33578999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPG 984 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~ 984 (1433)
|+++.. ..+||.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++.++.|++.|+...|.+ ++|.+...
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s-- 146 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS-- 146 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--
Confidence 987643 356889999999999999 999999999987754322 566788899999888865 45555443
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
..+|||||+|||||||+|+.+|+||+||||||+|||.+...|-+++.++. +.-|||++||.+. ......|+...+..
T Consensus 147 a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~- 223 (253)
T COG1117 147 ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL- 223 (253)
T ss_pred ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-
Confidence 34799999999999999999999999999999999999999999999997 4689999999864 45667899999986
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++.+|+.
T Consensus 224 G~LvE~g~T 232 (253)
T COG1117 224 GELVEFGPT 232 (253)
T ss_pred cEEEEEcCH
Confidence 899999996
No 79
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=368.88 Aligned_cols=207 Identities=25% Similarity=0.374 Sum_probs=180.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 246 (1433)
++.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.++|++|
T Consensus 16 ~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~t 92 (356)
T PRK11650 16 KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMS 92 (356)
T ss_pred CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCC
Confidence 356999999999999999999999999999999999999987 9999999998876543 368999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.|+.+..+. .+. +....++.+++.+||++..+..++
T Consensus 93 v~eNi~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~----- 133 (356)
T PRK11650 93 VRENMAYGLKIRGM----------PKA------------------------EIEERVAEAARILELEPLLDRKPR----- 133 (356)
T ss_pred HHHHHHhHHhhcCC----------CHH------------------------HHHHHHHHHHHHcCChhHhhCChh-----
Confidence 99999998654321 000 112345678999999887776654
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+|||||+.+|++++|||||++||+.++..+.+.|+++.+. .+++++.++|+..++.+++|+|++|++|+
T Consensus 134 ~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 134 ELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998653 35677779999999999999999999999
Q ss_pred EEEecChhHHH
Q 000541 407 IVYQGPREHVL 417 (1433)
Q Consensus 407 iv~~G~~~~~~ 417 (1433)
++..|+++++.
T Consensus 213 i~~~g~~~~~~ 223 (356)
T PRK11650 213 AEQIGTPVEVY 223 (356)
T ss_pred EEEECCHHHHH
Confidence 99999999874
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.6e-37 Score=364.85 Aligned_cols=217 Identities=24% Similarity=0.316 Sum_probs=185.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++.. ...+.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 6789998877411 112469999999999999999999999999999999999987 56899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. ..++.+||++|+..+++..||+||+.|....+ ..++.+.++++.++++.+||.+..|... +.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875532 1334455667889999999998877653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||+++|+++ .+.+.+|++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 999999999964 45678999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 81
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.4e-37 Score=368.40 Aligned_cols=208 Identities=24% Similarity=0.387 Sum_probs=181.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcc--eEEEECCccCCCCcc-cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVS--GRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 245 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 46999999999999999999999999999999999999987 7 999999998865443 46799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.|+.+..+.. +. +....++.+++.+||++..|+.++
T Consensus 95 tv~enl~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~~gL~~~~~~~~~---- 136 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------KA------------------------DIAERVADALKLVGLGDAAAHLPA---- 136 (362)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHhcCCCchhhCChh----
Confidence 9999999987543210 00 112245778999999988876665
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 137 -~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 137 -QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999865432567777999999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++..|+++++.+
T Consensus 216 ~i~~~g~~~~~~~ 228 (362)
T TIGR03258 216 RLAAHGEPQALYD 228 (362)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998843
No 82
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-37 Score=350.38 Aligned_cols=214 Identities=25% Similarity=0.359 Sum_probs=180.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 65 (235)
T cd03261 1 IELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDIS 65 (235)
T ss_pred CeEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35778887763 2469999999999999999999999999999999999887 46899999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
. ..+++.++|++|++.+++.+||+|++.+...... ..+..+..+.++++++.+++.+..++.+ ..||
T Consensus 66 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (235)
T cd03261 66 GLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELS 138 (235)
T ss_pred ccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCC
Confidence 3 2345679999999989999999999988643221 1233344566788999999987766653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
|||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 139 gG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~ 216 (235)
T cd03261 139 GGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIV 216 (235)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999999874 899999999975 46678999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
+.|+.
T Consensus 217 ~~g~~ 221 (235)
T cd03261 217 AEGTP 221 (235)
T ss_pred EecCH
Confidence 98875
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-37 Score=367.80 Aligned_cols=207 Identities=28% Similarity=0.447 Sum_probs=180.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 46899999999999999999999999999999999999988 9999999998865443 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+.++. .+. +....++.+++.+||++..|..+. .
T Consensus 94 ~eNi~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~l~L~~~~~~~~~-----~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGM----------GRA------------------------EVAERVAELLDLVGLPGSERKYPG-----Q 134 (353)
T ss_pred HHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCCCchhhCChh-----h
Confidence 9999998653321 000 112346778999999988776554 6
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543 56677799999999999999999999999
Q ss_pred EEecChhHHHH
Q 000541 408 VYQGPREHVLE 418 (1433)
Q Consensus 408 v~~G~~~~~~~ 418 (1433)
+..|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 84
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=366.96 Aligned_cols=206 Identities=24% Similarity=0.399 Sum_probs=179.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..++|++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 46899999999999999999999999999999999999998 9999999998876554 3789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+.++.. + .+....++++++.+||.+..+..+ +.
T Consensus 96 ~eNi~~~l~~~~~~----------~------------------------~~~~~~v~~~l~~~gl~~~~~r~~-----~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVP----------K------------------------EERKQRVKEALELVDLAGFEDRYV-----DQ 136 (351)
T ss_pred HHHHHHHHhHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99999987543211 0 011234577899999988776554 46
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986543 56677799999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 85
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.5e-37 Score=361.87 Aligned_cols=206 Identities=25% Similarity=0.382 Sum_probs=178.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998866432 45799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.|+.+..+.. +. +....+.++++.+||++..|..++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~v~e~l~~vgL~~~~~~~~~- 139 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------KD------------------------EIKRKVTELLALVGLGDKHDSYPS- 139 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-
Confidence 9999999999976543210 00 111235678999999987776654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+++.|+++.+.. +.+|+.++|+.+.+.++||+|++|
T Consensus 140 ----~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 140 ----NLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ----hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 699999999999999999999999999999999999999999999987643 466777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 86
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=366.80 Aligned_cols=216 Identities=24% Similarity=0.359 Sum_probs=187.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 378899988762 12469999999999999999999999999999999999987 5699999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
... ..++.+|||+|+..++|.+||+||+.|....+ ..+..+.++.++++++.++|.+..++.+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 432 23478999999999999999999999986543 2344555677899999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+.+|++++|.+ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998865 999999999974 67889999999985 89999998
Q ss_pred CC
Q 000541 1073 LG 1074 (1433)
Q Consensus 1073 ~~ 1074 (1433)
..
T Consensus 219 ~~ 220 (356)
T PRK11650 219 PV 220 (356)
T ss_pred HH
Confidence 63
No 87
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.3e-37 Score=366.17 Aligned_cols=214 Identities=26% Similarity=0.384 Sum_probs=188.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478999988773 2468999999999999999999999999999999999987 5699999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.. ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.++.++++++.++|.++.+... ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 224577999999999999999999999986543 2334556678999999999998888753 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999975 67888999999986 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
+
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 88
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.9e-37 Score=362.31 Aligned_cols=215 Identities=27% Similarity=0.390 Sum_probs=186.5
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|+++.++ ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEE
Confidence 3589999998873 3469999999999999999999999999999999999987 468999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 914 KKQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 914 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
... ...++.+||++|+..+++.+||+|++.+.+.++. .+..+..+.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665431 222334456778999999988877765 479999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999975 56778999999986 8999999
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 89
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.7e-37 Score=362.58 Aligned_cols=209 Identities=20% Similarity=0.318 Sum_probs=181.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD 239 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 239 (1433)
+.+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 4567999999999999999999999999999999999999997 9999999999876543 46799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+++++||+||+.|+.+..+.. +. +....++.+++.+||++..++.
T Consensus 81 ~l~~~~TV~eNi~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~vgL~~~~~~~ 126 (363)
T TIGR01186 81 ALFPHMTILQNTSLGPELLGWP----------EQ------------------------ERKEKALELLKLVGLEEYEHRY 126 (363)
T ss_pred cCCCCCCHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHhcCCchhhhCC
Confidence 9999999999999986543321 00 1122356789999998877766
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
++ .|||||||||+|||||+.+|+++||||||+|||+.++.++.+.++++.+. .+.||+.++|+..++..++|+|
T Consensus 127 p~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI 200 (363)
T TIGR01186 127 PD-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRI 200 (363)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 65 59999999999999999999999999999999999999999999988653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
++|++|+++..|+++++..
T Consensus 201 ~vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 201 VIMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEEeCCEEEeeCCHHHHHh
Confidence 9999999999999998753
No 90
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.5e-37 Score=366.18 Aligned_cols=218 Identities=29% Similarity=0.407 Sum_probs=185.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.++|++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 45899999999999999999999999999999999999987 9999999998865544 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+.++.. +. +....++.+++.+||++..+..+. .
T Consensus 104 ~eNi~~~l~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~p~-----~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------AA------------------------EITPRVMEALRMVQLEEFAQRKPH-----Q 144 (375)
T ss_pred HHHHHHHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-----h
Confidence 99999986533210 00 112245678999999987776654 6
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987643 56677799999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChhhHH
Q 000541 408 VYQGPREHVLEFFKFMGFECPKRKGVADFL 437 (1433)
Q Consensus 408 v~~G~~~~~~~~f~~~G~~~p~~~~~adfl 437 (1433)
+..|+++++.+ .|....+++|+
T Consensus 224 ~~~g~~~~i~~--------~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIYE--------EPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHHh--------CcccHHHHHhc
Confidence 99999998743 45544455554
No 91
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.9e-37 Score=358.92 Aligned_cols=207 Identities=28% Similarity=0.413 Sum_probs=179.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
.+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+
T Consensus 19 ~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 95 (306)
T PRK13537 19 DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDF 95 (306)
T ss_pred CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCC
Confidence 356999999999999999999999999999999999999998 999999999875432 246799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.|.++..+... . +....++.+++.+||++..++.++
T Consensus 96 tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 137 (306)
T PRK13537 96 TVRENLLVFGRYFGLSA----------A------------------------AARALVPPLLEFAKLENKADAKVG---- 137 (306)
T ss_pred cHHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCchHhcCchh----
Confidence 99999998665432100 0 011234678899999988888775
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|..+++.++||+|++|++|
T Consensus 138 -~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~till~sH~l~e~~~~~d~i~il~~G 214 (306)
T PRK13537 138 -ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVIEEG 214 (306)
T ss_pred -hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999854 3667787999999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+++++.+
T Consensus 215 ~i~~~g~~~~l~~ 227 (306)
T PRK13537 215 RKIAEGAPHALIE 227 (306)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 92
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=363.21 Aligned_cols=215 Identities=24% Similarity=0.372 Sum_probs=188.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 588999998773 2468999999999999999999999999999999999987 5699999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
... ..+|.+|||+|+..++|.+||+||+.|....+. .++.+.+++++++++.+++.++.+... ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 234789999999999999999999999865432 334556678899999999998887663 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++.+.+|++++|.+ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999975 67888999999985 89999998
Q ss_pred CC
Q 000541 1073 LG 1074 (1433)
Q Consensus 1073 ~~ 1074 (1433)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 63
No 93
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-37 Score=340.80 Aligned_cols=210 Identities=28% Similarity=0.411 Sum_probs=176.4
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 5678887763 2469999999999999999999999999999999999876 568999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..++.++|++|++.+++.+|++|++.+..... .......++.++++++.+++.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23457899999998889999999998765332 1223334456788999999987766653 4799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999975 46678999999986 7887655
No 94
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=331.90 Aligned_cols=227 Identities=28% Similarity=0.385 Sum_probs=193.0
Q ss_pred ccccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc----ceEEEEc
Q 000541 161 ILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ----RTAAYIS 236 (1433)
Q Consensus 161 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~ 236 (1433)
.+.++.+..++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+
T Consensus 9 ~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTF 85 (250)
T COG0411 9 GLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTF 85 (250)
T ss_pred cceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeec
Confidence 3456778899999999999999999999999999999999999999998 99999999999887765 3478889
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc
Q 000541 237 QHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA 316 (1433)
Q Consensus 237 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 316 (1433)
|....|++|||.||+..++..+.. ....-...+. ..+..+.......+|+.+||.+.+
T Consensus 86 Q~~rlF~~lTVlENv~va~~~~~~---~~~~l~~~~~-------------------~~~e~~~~e~A~~~Le~vgL~~~a 143 (250)
T COG0411 86 QITRLFPGLTVLENVAVGAHARLG---LSGLLGRPRA-------------------RKEEREARERARELLEFVGLGELA 143 (250)
T ss_pred ccccccCCCcHHHHHHHHhhhhhh---hhhhhccccc-------------------hhhHHHHHHHHHHHHHHcCCchhh
Confidence 999999999999999998765421 0000000000 001122334567799999999999
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
|+..|+ ||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ .++.+|+.|-|++.-++.+|
T Consensus 144 ~~~A~~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~ 217 (250)
T COG0411 144 DRPAGN-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLA 217 (250)
T ss_pred cchhhc-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhc
Confidence 999986 999999999999999999999999999999999999999999999865 35688888999999999999
Q ss_pred CeEEEecCCeEEEecChhHHHH
Q 000541 397 DDIILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~~~~~~ 418 (1433)
|||+||+.|+++.+|+++++.+
T Consensus 218 dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 218 DRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred cEEEeccCCcCcccCCHHHHhc
Confidence 9999999999999999999864
No 95
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=341.50 Aligned_cols=207 Identities=29% Similarity=0.425 Sum_probs=182.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCC----CCcccceEEEEcCC-CCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMD----EFVPQRTAAYISQH-DNHIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~-d~~~~ 243 (1433)
..+|+|+|+.|++|+.++|+||||||||||+++|+|.+.|+ +|+|.++|.+.. ....++.+|||+|+ |.++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999998865 22345789999999 56688
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
.-||.|.++|+.+..+... ++...+++.+++.+||.+..+..+
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~p--- 136 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRPP--- 136 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCCc---
Confidence 8999999999988766421 112345778999999998877554
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
..|||||||||+||.+|+.+|++++|||||+|||+..+.++++.++++.+ .++.|+|+++|+.+.+.+++|++++|+
T Consensus 137 --~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 137 --FNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred --cccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999865 345677779999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000541 404 DGQIVYQGPREHVLE 418 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~~ 418 (1433)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 96
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6e-37 Score=362.91 Aligned_cols=214 Identities=24% Similarity=0.337 Sum_probs=187.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeee--eEEEEcCc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIS--GSIMISGY 912 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~--G~I~i~G~ 912 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 578999998873 2469999999999999999999999999999999999887 457 99999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 913 PKKQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 913 ~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
+... ...+|.+|||+|+..++|.+||+||+.|....+ ..+..+.+++++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 223567999999999999999999999986543 2344555677899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|.+ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999975 57788999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9986
No 97
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.3e-38 Score=321.58 Aligned_cols=206 Identities=27% Similarity=0.373 Sum_probs=182.4
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQET----FARISGYCEQNDIHSP 934 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~----~~~~~gyv~Q~d~~~~ 934 (1433)
+++++++|||+.+++||++|++|||||||||.+.++.|... +.+|+|.+||.+++... .+..+||.||+...|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45689999999999999999999999999999999999988 56999999999876532 2335899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000541 935 NVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1014 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEP 1014 (1433)
.+||+||++-....+.. +....++++..+++++.+.+.++++... ..||||||||+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999877666532 2223456667889999999999999863 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1015 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1015 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
++|+||.+...|.+.++.+.+.|..|++|-|.-+ +....+||.+++.+ |++...|++.
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999975 78899999999996 8999999973
No 98
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.2e-37 Score=313.02 Aligned_cols=196 Identities=28% Similarity=0.371 Sum_probs=172.1
Q ss_pred cceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHHHHH
Q 000541 866 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE-TFARISGYCEQNDIHSPNVTVYESLLY 944 (1433)
Q Consensus 866 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f 944 (1433)
..++.|.+||++||+||||||||||||+|+|... |.+|+|+|||++.... ...|-++.++|+..+|..+||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4678899999999999999999999999999988 5699999999986543 456778999999999999999999976
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHH
Q 000541 945 SAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1024 (1433)
Q Consensus 945 ~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~ 1024 (1433)
+..-. ...+ .+.++.++.++..+||.++.+++.+ .|||||||||++||+|+++-+||+||||+|.|||.-+.
T Consensus 95 Gl~P~--LkL~-a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPG--LKLN-AEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCcc--cccC-HHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 53211 1222 4455678999999999999988753 69999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1025 IVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1025 ~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++..++.++.++ +.|++++||+|+ |.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999855 899999999996 78899999999986 899999986
No 99
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-37 Score=338.46 Aligned_cols=209 Identities=25% Similarity=0.430 Sum_probs=177.3
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5678887663 2469999999999999999999999999999999999876 468999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000541 917 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRL 996 (1433)
Q Consensus 917 ~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl 996 (1433)
..++.++|++|+..+++.+||+|++.+....+. ....+.++.++++++.+++.+..++. ...||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988899999999988655431 22334455678899999998766654 357999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 997 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 997 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999877899999999975 46677999999985 7887654
No 100
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.7e-37 Score=340.88 Aligned_cols=208 Identities=24% Similarity=0.332 Sum_probs=174.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 578899887731 12359999999999999999999999999999999999876 45899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. .+++.++|++|++.+++.+||.||+.+....+. ......++.++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988999999999988754321 222334556888999999987776653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|.+ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999877999999999975 45667899999986 54
No 101
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.5e-37 Score=310.81 Aligned_cols=201 Identities=24% Similarity=0.396 Sum_probs=175.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 252 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 252 (1433)
.++..|.+||+++|+||||||||||||.++|+..|. +|+|.+||++.....| +|-++.++|+.++|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999998 9999999999876655 578999999999999999999999
Q ss_pred HHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhH
Q 000541 253 FSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQ 332 (1433)
Q Consensus 253 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 332 (1433)
++.. ++- ++.. +....++.++...||..+.+...+ .|||||
T Consensus 94 LGl~---P~L------kL~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGL------KLNA-------------------------EQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---ccc------ccCH-------------------------HHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8742 110 0111 122346778999999999887765 599999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecC
Q 000541 333 KKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGP 412 (1433)
Q Consensus 333 rqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 412 (1433)
||||++||+|+.+.+|++||||+|+||+.-+.++...+.+++... +.|+++++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~-~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDER-KMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998754 5666668888899999999999999999999999
Q ss_pred hhHHH
Q 000541 413 REHVL 417 (1433)
Q Consensus 413 ~~~~~ 417 (1433)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98765
No 102
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=340.31 Aligned_cols=214 Identities=25% Similarity=0.357 Sum_probs=187.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|++|.++. ...+|+|+|+.+++||.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 678999998841 1479999999999999999999999999999999999988 55899999998855
Q ss_pred ----cccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 ----QETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ----~~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
...+++.+|||+|++. .+..-||.|.+.|+..- ...+.++.+++++++++.+++.+++++. ...|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n---~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLEN---LGLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhh---cCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 3456788999999974 45678999999998642 3455567888999999999999998775 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |.|||+++||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 699999999864 46677999999986 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 103
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-37 Score=325.22 Aligned_cols=210 Identities=24% Similarity=0.412 Sum_probs=175.9
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc----ceEEEEcCCCC
Q 000541 165 RKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ----RTAAYISQHDN 240 (1433)
Q Consensus 165 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~ 240 (1433)
.+++.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+. +-++||||...
T Consensus 12 ~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~ 88 (237)
T COG0410 12 GYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRR 88 (237)
T ss_pred cccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCccccc
Confidence 445678999999999999999999999999999999999999987 99999999999887664 45899999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhC-CCcccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILG-LDVCADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~ 319 (1433)
.|++|||+|||..++..+.. + +.. ..+ .|.+.+.|= |.+-.+..
T Consensus 89 iF~~LTVeENL~~g~~~~~~--~-----~~~----------~~~------------------~e~v~~lFP~Lker~~~~ 133 (237)
T COG0410 89 IFPRLTVEENLLLGAYARRD--K-----EAQ----------ERD------------------LEEVYELFPRLKERRNQR 133 (237)
T ss_pred chhhCcHHHHHhhhhhcccc--c-----ccc----------ccc------------------HHHHHHHChhHHHHhcCc
Confidence 99999999999988643210 0 000 000 122333331 34445555
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
-| .|||||||.++|||||+++|++|+|||||.||-|.-..+|.+.++++.+. ++.+|+.+.|+...+.+++|+.
T Consensus 134 aG-----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~ 207 (237)
T COG0410 134 AG-----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRG 207 (237)
T ss_pred cc-----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEE
Confidence 55 49999999999999999999999999999999999999999999998754 3578888999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
++|.+|+|++.|+.+++..
T Consensus 208 yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 208 YVLENGRIVLSGTAAELLA 226 (237)
T ss_pred EEEeCCEEEEecCHHHHhc
Confidence 9999999999999998863
No 104
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=338.91 Aligned_cols=215 Identities=27% Similarity=0.369 Sum_probs=179.4
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 567887776310 011469999999999999999999999999999999999876 468999999987642
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000541 917 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRL 996 (1433)
Q Consensus 917 ~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl 996 (1433)
.++.++|++|++.+++.+||+|++.+....+. ...+...+.++++++.+++.+..+..+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35679999999988888999999988754331 222334556788999999987766653 57999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEec-CcEEEEEcCC
Q 000541 997 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKR-GGQEIYVGSL 1073 (1433)
Q Consensus 997 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~-gG~~~y~G~~ 1073 (1433)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|.+ +|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999975 46678999999985 4899987764
No 105
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-36 Score=355.20 Aligned_cols=214 Identities=28% Similarity=0.389 Sum_probs=183.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988773 2469999999999999999999999999999999999876 4689999999875
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 915 KQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
.. ...++.+||++|++.+++.+||+|++.+.+... ..+..+..+.++++++.+++.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 224567999999998999999999998755432 1223333456778999999988777664 4799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999975 56678999999985 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 106
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=360.23 Aligned_cols=216 Identities=26% Similarity=0.379 Sum_probs=185.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67889888763 2469999999999999999999999999999999999887 56899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 QE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.. ..++.+||++|+..++|.+||+||+.|....+.. ...+.++.++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987653211 12234455667899999999988877663 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999876 899999999975 67888999999985 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 107
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.9e-37 Score=357.17 Aligned_cols=202 Identities=28% Similarity=0.390 Sum_probs=176.3
Q ss_pred ceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc--ccccceEEEeccCCCCCCCCC
Q 000541 860 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ--ETFARISGYCEQNDIHSPNVT 937 (1433)
Q Consensus 860 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 937 (1433)
++.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999987 468999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000541 938 VYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1017 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsg 1017 (1433)
|+|++.+.+.++. .+..+.++.++++++.+++.+..++.+ +.|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765532 223344556889999999988777764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1018 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1018 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999878999999999975 56778999999985 899999985
No 108
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=360.15 Aligned_cols=210 Identities=28% Similarity=0.392 Sum_probs=178.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 46999999999999999999999999999999999999987 9999999998865433 3679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+...... ...+ .+....++.+++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~------~~~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRE------RPNA------------------------AAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhccccc------CCCH------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999865321000 0000 011234567899999988777655 46
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|++++|||||+|||+.++.++.+.|+++.+. .+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEE-LKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 356777799999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999884
No 109
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.6e-37 Score=312.24 Aligned_cols=204 Identities=25% Similarity=0.383 Sum_probs=178.7
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCC
Q 000541 165 RKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQH 238 (1433)
Q Consensus 165 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~ 238 (1433)
+.....+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|.||+|+|+
T Consensus 11 Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD 87 (223)
T COG2884 11 YPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQD 87 (223)
T ss_pred cCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeee
Confidence 334456999999999999999999999999999999999999998 9999999999875532 5789999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
..+++..||.||++|+.+..|... .+....+..+|+..||.+.++.
T Consensus 88 ~rLL~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~ 133 (223)
T COG2884 88 FRLLPDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARA 133 (223)
T ss_pred ccccccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhc
Confidence 999999999999999988766421 1123456778999999998875
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.. ..|||||||||+||||++.+|++|+.||||-.||+.++.+|++.+.++.. .||||++.+|+..-+..+-.+
T Consensus 134 lP-----~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~r 206 (223)
T COG2884 134 LP-----SQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHR 206 (223)
T ss_pred Cc-----cccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCc
Confidence 54 46999999999999999999999999999999999999999999999854 478888899999999999999
Q ss_pred EEEecCCeEEEecC
Q 000541 399 IILISDGQIVYQGP 412 (1433)
Q Consensus 399 vilL~~G~iv~~G~ 412 (1433)
++.|++|+++....
T Consensus 207 vl~l~~Grl~~d~~ 220 (223)
T COG2884 207 VLALEDGRLVRDES 220 (223)
T ss_pred EEEEeCCEEEeccc
Confidence 99999999987543
No 110
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-36 Score=337.30 Aligned_cols=211 Identities=26% Similarity=0.393 Sum_probs=177.3
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 35788887763 2369999999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 916 QE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 916 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
.. ..++.++|++|++.+++..|++||+.+....+ .....+.++.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 32 22357999999998888999999998765432 1223334456788999999987766653 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++++|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999864 899999999974 56677899999985 8888876
No 111
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-37 Score=370.86 Aligned_cols=210 Identities=25% Similarity=0.452 Sum_probs=176.2
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIG 243 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 243 (1433)
++.+||+|+|++|+|||.+||+|||||||||+.++|..+++|+ +|+|.+||+|+.+.++ ++.+|+|.|+|.+|.
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs 555 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS 555 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec
Confidence 3467999999999999999999999999999999999999998 9999999999988765 478999999998876
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
-||+|||.|+... .+.|..+.|+. .....|.|. ++++..||.||++
T Consensus 556 -~sI~eNI~YG~~~-------------------------~t~e~i~~AAk-----~ANah~FI~---~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 556 -GSIRENIAYGLDN-------------------------ATDEEIEAAAK-----MANAHEFIT---NFPDGYNTVVGEK 601 (716)
T ss_pred -ccHHHHHhcCCCC-------------------------CCHHHHHHHHH-----HhChHHHHH---hCccccccccCCc
Confidence 4999999998541 11122222221 112233333 4999999999998
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
+. .||||||||++|||||+.+|+||||||.||+||+.+...+-+.|.+..+ +.|+++|.|.. .+.+.+|+|++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~---~rTVlvIAHRL-STV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ---GRTVLVIAHRL-STVRHADQIVVID 676 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc---CCeEEEEehhh-hHhhhccEEEEEc
Confidence 87 5999999999999999999999999999999999999999999988743 35666677765 5667899999999
Q ss_pred CCeEEEecChhHHHH
Q 000541 404 DGQIVYQGPREHVLE 418 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~~ 418 (1433)
+|++++.|+++|+.+
T Consensus 677 ~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 677 KGRVVEMGTHDELLS 691 (716)
T ss_pred CCeEEecccHHHHhh
Confidence 999999999999875
No 112
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=342.17 Aligned_cols=207 Identities=30% Similarity=0.402 Sum_probs=174.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999987 999999998875432 235699999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++.+.... .... +....++.+++.+||++..++.++
T Consensus 90 ~~~tv~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 135 (235)
T cd03261 90 DSLTVFENVAFPLREHTR---------LSEE------------------------EIREIVLEKLEAVGLRGAEDLYPA- 135 (235)
T ss_pred CCCcHHHHHHHHHhhccC---------CCHH------------------------HHHHHHHHHHHHcCCchhhcCChh-
Confidence 999999999986432100 0000 011234568899999877666664
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.++||+|++|
T Consensus 136 ----~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 136 ----ELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 3566777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999987753
No 113
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-36 Score=360.39 Aligned_cols=214 Identities=23% Similarity=0.343 Sum_probs=187.1
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999998773 2469999999999999999999999999999999999987 5689999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.. ...+|.+||++|+..++|.+||+||+.|+...+ ..+..+.++.++++++.+++.+..++.+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999976433 2234455667899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++...+|++++|.+ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999865 999999999975 67888999999985 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 114
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=361.49 Aligned_cols=206 Identities=24% Similarity=0.362 Sum_probs=179.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
..+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 46899999999999999999999999999999999999988 9999999998865443 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+.++.. +. +....++.+++.+||.+..+..+ +.
T Consensus 109 ~eNi~~~l~~~~~~----------~~------------------------~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------KA------------------------EIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 99999986543210 00 11234567899999987766555 46
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|++|+|||||++||..++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999886644 56777799999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999875
No 115
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=338.58 Aligned_cols=213 Identities=29% Similarity=0.383 Sum_probs=179.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecC
Confidence 35778887763 2469999999999999999999999999999999999876 46899999998653
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ...++.++|++|+..+++.+||+|++.+....+. ....+.++.++++++.+++.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 2334678999999989999999999988754431 222334456789999999987766653 47999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999975 56677899999985 89998876
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 116
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.9e-36 Score=342.08 Aligned_cols=215 Identities=28% Similarity=0.368 Sum_probs=179.1
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 5678887663 2469999999999999999999999999999999999876 468999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 917 E---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLE-------VDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 917 ~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~-------~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
. . .++.++|++|++.+++.+||+|++.+....+.... .......+.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 2 1 23468999999999999999999988754321110 01233445678899999998766654 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999878999999999975 56677999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 117
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.5e-36 Score=354.31 Aligned_cols=207 Identities=28% Similarity=0.404 Sum_probs=178.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
++++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 81 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDL 81 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCC
Confidence 457999999999999999999999999999999999999987 999999998875421 235699999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.+.++..+.. .. +....++.+++.+||++..++.++
T Consensus 82 tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 123 (302)
T TIGR01188 82 TGRENLEMMGRLYGLP----------KD------------------------EAEERAEELLELFELGEAADRPVG---- 123 (302)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhCCchh----
Confidence 9999999876543210 00 011235678999999988887765
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|++|++|
T Consensus 124 -~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~tvi~~sH~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 124 -TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE--EGVTILLTTHYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999864 2567777999999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+++++.+
T Consensus 201 ~i~~~g~~~~l~~ 213 (302)
T TIGR01188 201 RIIAEGTPEELKR 213 (302)
T ss_pred EEEEECCHHHHHH
Confidence 9999999998765
No 118
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3e-36 Score=337.85 Aligned_cols=221 Identities=37% Similarity=0.626 Sum_probs=181.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC-CeeeeEEEEcCccC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYISGSIMISGYPK 914 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~-~~~~G~I~i~G~~~ 914 (1433)
+.|+|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 5688888877411 0135799999999999999999999999999999999998751 13589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEE-VMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~-vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.....++.++|++|++.+++.+||+||+.|.+....+...........+++ .++.+++.+..++. .+.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998765443322122222334555 88888888766654 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998877999999999985578899999999985 8988765
No 119
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=357.86 Aligned_cols=217 Identities=24% Similarity=0.320 Sum_probs=183.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|++++++.. ..++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5788998887411 113569999999999999999999999999999999999987 46899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. ..++.+||++|+..+++.+||+||+.+....+ ..+..+.++.++++++.+++.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875443 1233444567889999999988776653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 46677999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 120
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.4e-36 Score=340.27 Aligned_cols=213 Identities=27% Similarity=0.381 Sum_probs=179.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 65 (232)
T cd03218 1 LRAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDIT 65 (232)
T ss_pred CeEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 35678887763 2469999999999999999999999999999999999877 46899999998753
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 QE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
.. . .++.++|++|++.+++.+||+|++.+....+. .......+.++++++.+++.+..++.+ ..||||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 137 (232)
T cd03218 66 KLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGG 137 (232)
T ss_pred cCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHH
Confidence 21 1 23468999999999999999999987643321 122334456788999999987666553 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 138 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 215 (232)
T cd03218 138 ERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEG 215 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEe
Confidence 999999999999999999999999999999999999999999877999999999975 57788999999985 8999988
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 216 ~~ 217 (232)
T cd03218 216 TP 217 (232)
T ss_pred CH
Confidence 75
No 121
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=360.43 Aligned_cols=206 Identities=25% Similarity=0.413 Sum_probs=177.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 46999999999999999999999999999999999999987 9999999998765433 3679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.|+.+..+.. +. +....++.+++.+||++..+..++ .
T Consensus 93 ~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~lgL~~~~~~~~~-----~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------KE------------------------EINQRVNQVAEVLQLAHLLDRKPK-----A 133 (369)
T ss_pred HHHHHhHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 99999986533210 00 011235678999999887776664 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 56677799999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 122
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.1e-36 Score=337.45 Aligned_cols=215 Identities=28% Similarity=0.427 Sum_probs=179.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 5678888876411 011269999999999999999999999999999999999876 46899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999998899999999998765433 1223344567788999999987766653 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999877999999999974 56778999999986 7887654
No 123
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-36 Score=340.20 Aligned_cols=217 Identities=27% Similarity=0.402 Sum_probs=180.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367889988773 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 915 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 915 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
... ..++.++|++|++.+++.+||+|++.+....+... ........+.++++++.+++.+..+..+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 22456899999998888999999998865432110 0122233456788999999987666653 5799999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999875 899999999975 46778999999985 8999988
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 75
No 124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=324.35 Aligned_cols=217 Identities=26% Similarity=0.337 Sum_probs=178.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++.+|++..++... ....+|+|||+++.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 478899988775321 11259999999999999999999999999999999999988 4699999999876
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000541 915 KQE----TFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGVSG 987 (1433)
Q Consensus 915 ~~~----~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~~~ 987 (1433)
... .+.+.+-+|+||+. +.|..||++.|.-.... ...++ .++++.++++.+||.+- .++. ...
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~--~~~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSK--SQQRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccH--HHHHHHHHHHHcCCCHHHHhcC-----chh
Confidence 443 35678999999974 67999999998654332 22222 23348899999999753 2332 347
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||||||++|||||+.+|++|+||||||.||+..++.|+++|.++.++ |.|.|+++||.+ -+...|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999865 789999999965 36678899999986 89
Q ss_pred EEEEcCCC
Q 000541 1067 EIYVGSLG 1074 (1433)
Q Consensus 1067 ~~y~G~~~ 1074 (1433)
++..++.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=323.11 Aligned_cols=205 Identities=27% Similarity=0.337 Sum_probs=176.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc----ccceEEEEcCCC--CCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 243 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 243 (1433)
++|+|||++|.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999998 999999998776543 346789999995 5679
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
..||++.|.-+.+..|... ....+.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----hc
Confidence 9999999987765432210 1112566899999986432 34
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
....|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 5567999999999999999999999999999999999999999999999876 456788889999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000541 404 DGQIVYQGPREHVLE 418 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~~ 418 (1433)
+|++++.++.+++.+
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999999864
No 126
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=358.05 Aligned_cols=214 Identities=23% Similarity=0.367 Sum_probs=186.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 588999998763 2469999999999999999999999999999999999987 5689999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQ-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.. ...+|.+|||+|+..++|.+||.||+.|....+ ..+..+.+++++++++.+++.+..+... ..||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999876543 2234555667899999999998877653 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++...+|++++|.+ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998754 899999999975 67889999999985 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
+
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 6
No 127
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=359.77 Aligned_cols=214 Identities=25% Similarity=0.372 Sum_probs=184.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 378899988773 2469999999999999999999999999999999999987 4689999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 915 KQE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 915 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
... ..++.+||++|+..+++.+||+||+.|....+. .+..+.++.++++++.+++.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 431 234679999999999999999999998765431 233445567899999999988777654 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++...+|++++|.+ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999975 57788999999985 89999998
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 128
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-36 Score=360.75 Aligned_cols=218 Identities=26% Similarity=0.373 Sum_probs=184.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 378899988773 3569999999999999999999999999999999999887 5689999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.+||++|+..+++.+||+|++.+....... ........++.++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 34567899999999988999999999875421110 01112334567899999999998887753 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999975 56688999999985 899999
Q ss_pred cCCC
Q 000541 1071 GSLG 1074 (1433)
Q Consensus 1071 G~~~ 1074 (1433)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 9863
No 129
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-36 Score=335.02 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=175.3
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (208)
T cd03268 1 LKTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQ 65 (208)
T ss_pred CEEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCccc
Confidence 35778887763 2469999999999999999999999999999999999876 56999999998764
Q ss_pred c-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 916 Q-ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 916 ~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
. ...++.++|++|++.+++..||+|++.+....+. . .++.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 133 (208)
T cd03268 66 KNIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQ 133 (208)
T ss_pred chHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHH
Confidence 3 2335678999999988999999999987654321 1 1345788899999987776653 479999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 134 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 134 RLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998877899999999975 45677999999985 7888765
No 130
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.3e-36 Score=351.10 Aligned_cols=212 Identities=25% Similarity=0.380 Sum_probs=183.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|++++++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67889888763 2469999999999999999999999999999999999877 56999999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ...++.+||++|++.+++.+||.|++.+.+.++. .+.++..+.++++++.+++.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998776542 223344556889999999998877764 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999975 57788999999985 899999986
No 131
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.4e-36 Score=354.41 Aligned_cols=207 Identities=27% Similarity=0.402 Sum_probs=178.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
++.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+
T Consensus 53 ~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~ 129 (340)
T PRK13536 53 DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEF 129 (340)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCC
Confidence 356999999999999999999999999999999999999998 999999999875432 246799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.|.....+.. .. +....++.+++.+||++..++.++
T Consensus 130 tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~L~~~~~~~~~---- 171 (340)
T PRK13536 130 TVRENLLVFGRYFGMS----------TR------------------------EIEAVIPSLLEFARLESKADARVS---- 171 (340)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhCCChh----
Confidence 9999999755432210 00 011234567889999988888776
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+ .+++|+.++|+.+++.++||+|++|++|
T Consensus 172 -~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~--~g~tilisSH~l~e~~~~~d~i~il~~G 248 (340)
T PRK13536 172 -DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLEAG 248 (340)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999864 3567777999999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++++|+++++.+
T Consensus 249 ~i~~~g~~~~l~~ 261 (340)
T PRK13536 249 RKIAEGRPHALID 261 (340)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998864
No 132
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.8e-36 Score=338.46 Aligned_cols=214 Identities=23% Similarity=0.291 Sum_probs=176.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCC-----CCCeeeeEEEEc
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYISGSIMIS 910 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~-----~~~~~~G~I~i~ 910 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~ 65 (227)
T cd03260 1 IELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLD 65 (227)
T ss_pred CEEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEEC
Confidence 35678887663 236999999999999999999999999999999999987 5 568999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
|.+... ..+++.++|++|++.++ .+||+||+.+....+. .....+.++.++++++.+++.+..+.... .
T Consensus 66 g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~ 139 (227)
T cd03260 66 GKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---A 139 (227)
T ss_pred CEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---c
Confidence 987542 23456799999998877 7999999988654331 11112234567889999999876555421 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ .+.+.+|++++|.+ |
T Consensus 140 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G 216 (227)
T cd03260 140 LGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-G 216 (227)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877 99999999975 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 217 ~i~~~g~~ 224 (227)
T cd03260 217 RLVEFGPT 224 (227)
T ss_pred EEEEecCc
Confidence 99998875
No 133
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.7e-36 Score=336.55 Aligned_cols=209 Identities=30% Similarity=0.422 Sum_probs=172.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 3578888776310 011469999999999999999999999999999999999876 46899999998754
Q ss_pred ccc-------ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000541 916 QET-------FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGL 988 (1433)
Q Consensus 916 ~~~-------~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~L 988 (1433)
... .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+++.+..+..+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 311 24579999999999999999999998764431 222334456788999999987766553 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 989 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 989 SgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|.+ |+
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRD-GK 217 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeC-Cc
Confidence 99999999999999999999999999999999999999999999987 58999999999753 4 48999999986 54
No 134
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-36 Score=341.09 Aligned_cols=216 Identities=28% Similarity=0.332 Sum_probs=177.2
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 5678877663 11469999999999999999999999999999999999876 458999999987642
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 917 E------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRL-----PLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 917 ~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
. ..++.++|++|++.+++.+||+||+.+...... ..........+.++++++.+++.+..+.. .
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 1 235679999999988999999999987532110 00111123345678889999997766654 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
..|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999975 46668999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 899998875
No 135
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-36 Score=338.47 Aligned_cols=217 Identities=25% Similarity=0.337 Sum_probs=180.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888776310 011269999999999999999999999999999999999987 46899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. ..++.++|++|++.+++.+|++||+.+....+. .......+.++++++.+++.+..+.. ...||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 234679999999999999999999988654331 22333455678899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 46677999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98874
No 136
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=335.79 Aligned_cols=217 Identities=24% Similarity=0.343 Sum_probs=179.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|+++|.++
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37889999887411 011469999999999999999999999999999999999876 5699999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 915 KQET------F-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 915 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
.... . ++.++|++|+..+++.+|++||+.+....+ ....+..++.++++++.+++.+..+.. ...
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4321 2 256899999998889999999998865432 122334455688999999998776654 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ..+.+|++++|.+ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999974 3455789998875 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998885
No 137
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-36 Score=333.71 Aligned_cols=192 Identities=31% Similarity=0.416 Sum_probs=162.9
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCC-CCCCCCHH
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDI-HSPNVTVY 939 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~-~~~~lTv~ 939 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.++|++|++. .+...||+
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 359999999999999999999999999999999999877 568999999987644344567999999964 34567999
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCC
Q 000541 940 ESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1019 (1433)
Q Consensus 940 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD 1019 (1433)
||+.+..... . ...+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~-----~--~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL-----D--AGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc-----C--ccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 11245788999999988777653 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 1020 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 1020 ~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999877999999999975 45667999999986 6653
No 138
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.3e-36 Score=337.96 Aligned_cols=214 Identities=21% Similarity=0.342 Sum_probs=180.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 56788887763 2469999999999999999999999999999999999876 56899999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 Q-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ...++.++|++|++..++.+||+|++.+...... .....+..+.++++++.+++.+..+.. ...|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2335679999999988899999999987542111 122334455678999999998766654 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999975 45677899999985 899999
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 875
No 139
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.3e-36 Score=354.37 Aligned_cols=202 Identities=24% Similarity=0.309 Sum_probs=176.9
Q ss_pred ceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc---cc----cceEEEeccCCCC
Q 000541 860 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE---TF----ARISGYCEQNDIH 932 (1433)
Q Consensus 860 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~---~~----~~~~gyv~Q~d~~ 932 (1433)
.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999987 5699999999886532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000541 933 SPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1012 (1433)
Q Consensus 933 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LD 1012 (1433)
+|.+||+||+.|..... ..+.++..+++.++++.++|.+..+... ..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876542 2344556677899999999988777653 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1013 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1013 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|||++||+.++..+++.++++.++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999999755 899999999964 46788999999985 899999985
No 140
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.4e-36 Score=378.87 Aligned_cols=207 Identities=29% Similarity=0.471 Sum_probs=172.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 246 (1433)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++... ++.++||+|++. +.+-|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~-Lf~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPF-LFSGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccch-hhcCc
Confidence 5899999999999999999999999999999999999998 9999999999987765 578999999885 55679
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
++||+.++.. +.+.+..+.|+...+. .|. +..++...||.||+.+.
T Consensus 563 I~eNi~l~~p-------------------------~~~~e~i~~A~~~ag~-----~~f---I~~lP~gy~t~v~E~G~- 608 (709)
T COG2274 563 IRENIALGNP-------------------------EATDEEIIEAAQLAGA-----HEF---IENLPMGYDTPVGEGGA- 608 (709)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCc-----HHH---HHhcccccccccccCCC-
Confidence 9999998632 2222333333322221 222 23489999999998665
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
+||||||||++|||||+.+|+||+||||||+||+.+...|.+.|.++.+ + .|+|.++|.. .+.+.||+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~-~T~I~IaHRl-~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--G-RTVIIIAHRL-STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--C-CeEEEEEccc-hHhhhccEEEEccCCc
Confidence 7999999999999999999999999999999999999999999999743 3 4455466654 6778999999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
|+.+|+++|+.+
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 141
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=332.58 Aligned_cols=200 Identities=29% Similarity=0.452 Sum_probs=168.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 56999999999999999999999999999999999999987 9999999988754322 3579999999888899999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.++....+. ... .....++.+++.+||++..++.++ .
T Consensus 90 ~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03259 90 AENIAFGLKLRGV----------PKA------------------------EIRARVRELLELVGLEGLLNRYPH-----E 130 (213)
T ss_pred HHHHHhHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 9999986532210 000 011234567889999877776664 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 356677799999999999999999999999
Q ss_pred EEec
Q 000541 408 VYQG 411 (1433)
Q Consensus 408 v~~G 411 (1433)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 142
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-36 Score=312.66 Aligned_cols=214 Identities=29% Similarity=0.420 Sum_probs=182.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
|+.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|... +.+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 56789999873 3579999999999999999999999999999999999887 45899999999875
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCh--hHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDS--PTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~--~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ...++..+..||+-.+-...||+|-+.++. .|..... .+..+..+++|+..++.+++.+. ...|||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr---~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSG 138 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGR---IPHRSGREPEEDERIAAQALAATDLSGLAGRD-----YRTLSG 138 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcc---cccccCCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCc
Confidence 4 344667799999988877889999999874 3432222 24455688899999999988765 357999
Q ss_pred HHHHHHHHHHHHhh------CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 991 EQRKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 991 GqrkRl~ia~~L~~------~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
||||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|++++|.+
T Consensus 139 GEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~- 216 (259)
T COG4559 139 GEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ- 216 (259)
T ss_pred hHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-
Confidence 99999999999986 446899999999999999999999999999999999999999874 5677899999985
Q ss_pred cEEEEEcCCC
Q 000541 1065 GQEIYVGSLG 1074 (1433)
Q Consensus 1065 G~~~y~G~~~ 1074 (1433)
|+++..|++.
T Consensus 217 Grv~a~g~p~ 226 (259)
T COG4559 217 GRVIASGSPQ 226 (259)
T ss_pred CeEeecCCHH
Confidence 8999999974
No 143
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6.4e-36 Score=334.03 Aligned_cols=214 Identities=25% Similarity=0.407 Sum_probs=178.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. +++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 357788877631 11469999999999999999999999999999999999876 46899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ..+++.++|++|++.+++..||+||+.+....+. .+.....+.++++++.+++.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345679999999988889999999988654431 222333456788999999987766653 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|.+ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999876 599999999975 46677899999985 899988875
No 144
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.2e-36 Score=332.64 Aligned_cols=206 Identities=27% Similarity=0.353 Sum_probs=173.0
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 56788888762 12369999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. .+++.++|++|++.+++.+||.|++.+....+. ......++.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999988899999999988754321 222334456788999999987655543 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998877999999999975 566678999999863
No 145
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.8e-36 Score=339.10 Aligned_cols=214 Identities=25% Similarity=0.343 Sum_probs=179.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 77889988763 2359999999999999999999999999999999999876 46899999998753
Q ss_pred c-----------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCC
Q 000541 916 Q-----------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPG 984 (1433)
Q Consensus 916 ~-----------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~ 984 (1433)
. ...++.++|++|++.+++..||+||+.+...... ........+.++++++.+++.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1234578999999988999999999987543211 122333455678899999998766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 3579999999999999999999999999999999999999999999999877999999999975 46678999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 899998875
No 146
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-36 Score=333.22 Aligned_cols=206 Identities=30% Similarity=0.396 Sum_probs=173.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~ 88 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDEL 88 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccC
Confidence 356999999999999999999999999999999999999887 999999998764321 235699999999889999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.+..+..+.. .. +....++.+++.+||++..++.++
T Consensus 89 tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 130 (220)
T cd03265 89 TGWENLYIHARLYGVP----------GA------------------------ERRERIDELLDFVGLLEAADRLVK---- 130 (220)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHhhCChh----
Confidence 9999999865432210 00 011235678999999877776665
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|++|
T Consensus 131 -~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G 208 (220)
T cd03265 131 -TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHG 208 (220)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 59999999999999999999999999999999999999999999998653 2567777999999999999999999999
Q ss_pred eEEEecChhHH
Q 000541 406 QIVYQGPREHV 416 (1433)
Q Consensus 406 ~iv~~G~~~~~ 416 (1433)
+++..|+++++
T Consensus 209 ~i~~~~~~~~~ 219 (220)
T cd03265 209 RIIAEGTPEEL 219 (220)
T ss_pred EEEEeCChHHc
Confidence 99999987753
No 147
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=352.51 Aligned_cols=206 Identities=27% Similarity=0.396 Sum_probs=177.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 9999999998765432 35799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++....+.. .. +....++.+++.+||++..++.++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~- 139 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------KA------------------------EIKARVTELLELVGLSDKADRYPA- 139 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh-
Confidence 9999999999876533210 00 011235668999999887776654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||+|++|
T Consensus 140 ----~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 140 ----QLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 3567777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 148
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-36 Score=338.11 Aligned_cols=213 Identities=25% Similarity=0.364 Sum_probs=178.9
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 56788877631 1359999999999999999999999999999999999876 468999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000541 917 ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP--LRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 917 ---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~--~~~~~vg~~~~~~LSgG 991 (1433)
...++.++|++|++.+++.+||+||+.+...++ ..+.+...+.++++++.+++.+ ..+.. +..||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 234567899999999999999999998865432 1223344556788999999985 55544 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999865 899999999975 46778999999985 899998
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 149
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.9e-36 Score=334.25 Aligned_cols=211 Identities=30% Similarity=0.435 Sum_probs=174.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcC
Confidence 35778877653 2369999999999999999999999999999999999987 46899999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000541 916 QE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELV-ELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. . .++.++|++|++.+++.+|++||+.+....+. .....+.++++++.+ ++.+..++. ...|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 32 1 24569999999999999999999988654321 122334566777777 465555544 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|++. ++.+.+|++++|.+ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877899999999974 46778999999985 899988
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 874
No 150
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-36 Score=344.99 Aligned_cols=218 Identities=21% Similarity=0.316 Sum_probs=180.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67899998874110 012369999999999999999999999999999999999987 56999999998764
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000541 916 Q-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN--PLRQALVGLPGVSG 987 (1433)
Q Consensus 916 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~--~~~~~~vg~~~~~~ 987 (1433)
. ...++.+||++|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..++. .+.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134567999999863 334679999998865432 234455556788999999996 455544 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999865 899999999964 45678999999986 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999985
No 151
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.2e-36 Score=339.93 Aligned_cols=217 Identities=26% Similarity=0.306 Sum_probs=177.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 56788887653 02359999999999999999999999999999999999876 46899999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCChhHHHHHHHHHHHHcCCcccccccccCCC
Q 000541 916 Q------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRL-----PLEVDSPTRKMFIEEVMELVELNPLRQALVGLPG 984 (1433)
Q Consensus 916 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~-----~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~ 984 (1433)
. ..+++.++|++|++.+++.+||+||+.+...... .........+++++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1235679999999988999999999976421100 00111223345678899999998766654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+.+.+|++++|.+
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999975 46678999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 899988875
No 152
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=337.78 Aligned_cols=212 Identities=27% Similarity=0.350 Sum_probs=178.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56788887763 2469999999999999999999999999999999999876 46899999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 916 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 916 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..+.++|++|+..+++.+||+||+.+....+ .....+..+.++++++.+++.+..+.. ...||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 2345799999998889999999998764432 122333455688999999998766654 35799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEec-CcEEEEEcCC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKR-GGQEIYVGSL 1073 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~-gG~~~y~G~~ 1073 (1433)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. .+.+.+|++++|.+ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999975 56778999999985 5899987765
No 153
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=343.09 Aligned_cols=218 Identities=27% Similarity=0.407 Sum_probs=178.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-----ccceEEEEcCCCC-CC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 242 (1433)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999886532 2357999999853 45
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC--ccccccc
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD--VCADTMV 320 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~--~~~dt~v 320 (1433)
...||+||+.|+....+. .+ .+....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGL----------SE------------------------EEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCC----------CH------------------------HHHHHHHHHHHHHcCCCchhhccCCc
Confidence 568999999986543211 00 01122456789999997 4455544
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
+.||||||||++||+||+.+|++++|||||+|||+.++.++.+.|+++++. .++||++++|+..++.++||+|+
T Consensus 143 -----~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 -----FELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998653 36777889999999999999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000541 401 LISDGQIVYQGPREHVLE---FFKFMGFECPK 429 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 429 (1433)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23345655544
No 154
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.1e-35 Score=347.36 Aligned_cols=206 Identities=29% Similarity=0.416 Sum_probs=175.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 246 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 46999999999999999999999999999999999999987 999999998864322 2457999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.+..+..+.. .. +....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMS----------TR------------------------EIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCChhHhcCchh-----
Confidence 999998754322110 00 011124567889999988887775
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA--RGKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh--CCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999864 35677779999999999999999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
+++.|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 155
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=340.60 Aligned_cols=211 Identities=26% Similarity=0.368 Sum_probs=178.1
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEc
Q 000541 164 SRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYIS 236 (1433)
Q Consensus 164 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 236 (1433)
++.+.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++
T Consensus 32 ~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~ 108 (269)
T cd03294 32 KKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVF 108 (269)
T ss_pred hhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEe
Confidence 4455678999999999999999999999999999999999999987 9999999988754321 24699999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc
Q 000541 237 QHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA 316 (1433)
Q Consensus 237 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 316 (1433)
|++.+++.+||+||+.++....+.. .. .....++.+++.+||++..
T Consensus 109 q~~~~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~ 154 (269)
T cd03294 109 QSFALLPHRTVLENVAFGLEVQGVP----------RA------------------------EREERAAEALELVGLEGWE 154 (269)
T ss_pred cCcccCCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHh
Confidence 9998899999999999875432110 00 0112345688999998777
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
++.++ .|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++
T Consensus 155 ~~~~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~ 228 (269)
T cd03294 155 HKYPD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLG 228 (269)
T ss_pred hCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhc
Confidence 77665 59999999999999999999999999999999999999999999998653 3567777899999999999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 000541 397 DDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~~~~~ 417 (1433)
|++++|++|++++.|+++++.
T Consensus 229 d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 229 DRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred CEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999988764
No 156
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.9e-36 Score=331.45 Aligned_cols=206 Identities=26% Similarity=0.378 Sum_probs=172.6
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 5678887763 11369999999999999999999999999999999999876 468999999987542
Q ss_pred c------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 917 E------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 917 ~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ..++.++|++|++.+++.+|++||+.+....+. ...++.++.++++++.+++.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 245679999999999999999999988754331 223334456788999999987666553 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|.+ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999777999999999974 45567899999985 54
No 157
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-35 Score=342.48 Aligned_cols=205 Identities=20% Similarity=0.235 Sum_probs=151.1
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcC
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISG 911 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G 911 (1433)
.|..+.+.+|++.++.. .-+++.+++..+..-+..+++|+||+||||+++++.|..+ +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 34568889998776421 1168899999999999999999999999999999999766 4577776655
Q ss_pred ccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 912 YPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 912 ~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
++.++|..|..+-+..+.|.+- .+-..++ |.. . ++..++-+..+||..- +.-. .+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~-pG~-~----~ee~r~hl~~~Gl~g~---la~~-si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSF-PGK-T----EEEIRRHLGSFGLSGE---LALQ-SIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHH-HHHHHhC-CCC-C----HHHHHHHHHhcCCCch---hhhc-cccccCCc
Confidence 4568999998665555555433 2333332 211 1 2234566778888642 1111 25689999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||-||.+|.....+|.+|+|||||+.||-.+-..+.+.|++. +..||+++|+-+ -+-..|+++++..+|.-.-..|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999876 457999999843 2455689999998643333334
Q ss_pred C
Q 000541 1072 S 1072 (1433)
Q Consensus 1072 ~ 1072 (1433)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 3
No 158
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-36 Score=342.70 Aligned_cols=203 Identities=25% Similarity=0.317 Sum_probs=172.5
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc---c----ccceEEEeccCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE---T----FARISGYCEQNDI 931 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~---~----~~~~~gyv~Q~d~ 931 (1433)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 34579999999999999999999999999999999999887 4589999999875421 1 1356999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEE
Q 000541 932 HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1011 (1433)
Q Consensus 932 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~L 1011 (1433)
+++.+||+||+.+....+ ........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|+||+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 899999999998865432 1223334456788999999987777654 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1012 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1012 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999975 46678999999985 899998875
No 159
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-35 Score=335.38 Aligned_cols=215 Identities=27% Similarity=0.416 Sum_probs=175.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 9999999998765432 2459999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++....+.. .+... ....+ ..+....++.+++.+||++..++.++
T Consensus 90 ~tv~~~l~~~~~~~~~~-------~~~~~------~~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (236)
T cd03219 90 LTVLENVMVAAQARTGS-------GLLLA------RARRE-----------EREARERAEELLERVGLADLADRPAG--- 142 (236)
T ss_pred CCHHHHHHHHHhhcccc-------ccccc------ccccc-----------HHHHHHHHHHHHHHcCccchhhCChh---
Confidence 99999999875432100 00000 00000 00112235678899999877666554
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+++|+.++|+.+++.+++|++++|++
T Consensus 143 --~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 143 --ELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE--RGITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 6999999999999999999999999999999999999999999999864 356677799999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 160
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.7e-34 Score=361.66 Aligned_cols=216 Identities=28% Similarity=0.430 Sum_probs=177.3
Q ss_pred cCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEE
Q 000541 830 PFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMI 909 (1433)
Q Consensus 830 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i 909 (1433)
|.-...++|+|++|.++.. +..+|+|+|++|+|||.+||+|+||||||||+|+|+|+.+ +.+|+|++
T Consensus 466 ~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 3344579999999998632 2369999999999999999999999999999999999988 56999999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCC-------ccccccc
Q 000541 910 SGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVEL-------NPLRQAL 979 (1433)
Q Consensus 910 ~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l-------~~~~~~~ 979 (1433)
||++..+ ..+|+.+|||+|++.++. -|++||+.++. | +.+.+ .+.++++..|. ..-.++.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~----p-~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN----P-EATDE----EIIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC----C-CCCHH----HHHHHHHHhCcHHHHHhcccccccc
Confidence 9998654 567899999999987764 59999998752 2 22222 22233333332 2234566
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhccee
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELF 1059 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ 1059 (1433)
+|.. ..+||||||||++|||+|+++|+||+||||||+||+.+.+.|++.|+++. .|+|+|+++|+++ .+..+|+++
T Consensus 603 v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 6654 46899999999999999999999999999999999999999999999985 5799999999975 688999999
Q ss_pred EEecCcEEEEEcCC
Q 000541 1060 LLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1060 ll~~gG~~~y~G~~ 1073 (1433)
+|++ |+++..|+.
T Consensus 679 Vl~~-Gkiv~~gs~ 691 (709)
T COG2274 679 VLDQ-GKIVEQGSH 691 (709)
T ss_pred EccC-CceeccCCH
Confidence 9985 899999996
No 161
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-35 Score=340.10 Aligned_cols=215 Identities=20% Similarity=0.333 Sum_probs=180.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 488999998763 2469999999999999999999999999999999999976 4689999999875
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000541 915 KQE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGL 988 (1433)
Q Consensus 915 ~~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~L 988 (1433)
... ..++.++|++|+..+++.+||.||+.+...... ..+....++.+.++++.+++.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988899999999987543211 1222333456778899999987776653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 989 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 989 SgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999964 56678999999985 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 162
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-36 Score=310.15 Aligned_cols=207 Identities=29% Similarity=0.444 Sum_probs=175.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc---ceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 245 (1433)
+++|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||++++++.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 56999999999999999999999999999999999999998 99999999999988764 4568999998887778
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+|-+.++..-.+.+.. ..+...+++.+|...++.+.+.. ..
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~R-----~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAGR-----DY 133 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhcc-----ch
Confidence 999999998643322111 00122345667777777776653 34
Q ss_pred CCCchhHhhHHHHHHHHhC------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 326 RGISGGQKKRVTTGEMMVG------PAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~------~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+.|||||||||.+||.|+. ++++||||||||+||.....++++..|++++. +..|+.+.|+.+.+..+||+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~--g~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE--GGAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc--CCcEEEEEccchHHHHhhhee
Confidence 5799999999999999974 45699999999999999999999999999874 456667899999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999999886
No 163
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=340.86 Aligned_cols=224 Identities=25% Similarity=0.384 Sum_probs=181.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------cccceEEEEcCCC-CC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------VPQRTAAYISQHD-NH 241 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 241 (1433)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+++.. ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999987 99999999987521 1235799999985 34
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMV 320 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 320 (1433)
+...||.||+.|+.+..+.. +. +....++.+++.+||. +..++.+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~ 142 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------KE------------------------KAEKIAAEKLEMVGLADEFWEKSP 142 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhccCCc
Confidence 44579999999976543210 00 1112356688899996 3445444
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.||++++|+.+++.++||+|+
T Consensus 143 -----~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 143 -----FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ--SGQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred -----ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEecCHHHHHHhCCEEE
Confidence 56999999999999999999999999999999999999999999998754 35677779999999999999999
Q ss_pred EecCCeEEEecChhHHH---HHHHhcCCCCCCCCChhhHH
Q 000541 401 LISDGQIVYQGPREHVL---EFFKFMGFECPKRKGVADFL 437 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~adfl 437 (1433)
+|++|+++++|+++++. +.++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999875 34556777776654444433
No 164
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=341.58 Aligned_cols=215 Identities=26% Similarity=0.349 Sum_probs=180.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +.+.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 378999998773 12359999999999999999999999999999999999887 4689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.+||++|++. .++..||.|++.|..... ..+....++.++++++.+++.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223467999999863 455689999998764321 2233344456789999999987777653 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999964 45678999999985 899999
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 165
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=312.52 Aligned_cols=214 Identities=22% Similarity=0.379 Sum_probs=184.3
Q ss_pred ccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc----ceEEEEcCC
Q 000541 163 PSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ----RTAAYISQH 238 (1433)
Q Consensus 163 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~ 238 (1433)
.++.+++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++.+... .-+||+||+
T Consensus 11 ~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE 87 (243)
T COG1137 11 AKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQE 87 (243)
T ss_pred hHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCccccccc
Confidence 34556788999999999999999999999999999999999999998 99999999999877553 348999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
+..|-.+||+|||.-..+.+... .. ..+.+...+.+|+.|+|.|+++.
T Consensus 88 ~SIFr~LtV~dNi~~vlE~~~~d--------~~------------------------~~~~~~~l~~LL~ef~i~hlr~~ 135 (243)
T COG1137 88 ASIFRKLTVEDNIMAVLEIREKD--------LK------------------------KAERKEELDALLEEFHITHLRDS 135 (243)
T ss_pred chHhhcCcHHHHHHHHHhhhhcc--------hh------------------------HHHHHHHHHHHHHHhchHHHhcC
Confidence 99999999999998776543210 00 01122346789999999999987
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.-. .||||||+|+-|||||+.+|+.++||||++|+||-+..+|-+.++.+.+ .+.-|+..-|+..|+..+|||
T Consensus 136 ~a~-----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dR 208 (243)
T COG1137 136 KAY-----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDR 208 (243)
T ss_pred ccc-----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhhe
Confidence 654 5999999999999999999999999999999999999999999999865 355566677999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000541 399 IILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~ 418 (1433)
.+++++|++..+|+++++.+
T Consensus 209 aYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 209 AYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EEEEecCeEEecCCHHHHhc
Confidence 99999999999999999864
No 166
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=329.55 Aligned_cols=209 Identities=34% Similarity=0.496 Sum_probs=174.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccc
Confidence 35778887663 236999999999999 999999999999999999999877 46899999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ...++.++|++|++.+++.+||.|++.+....+. .+..+.++.++++++.+++.+..++.+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 3 2345678999999999999999999988655431 222333456788999999987766553 57999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|.+ |+++..|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999976 599999999975 45567899999985 7888754
No 167
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-36 Score=317.08 Aligned_cols=213 Identities=27% Similarity=0.398 Sum_probs=177.0
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|++..| ++.++|+|||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+++
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 6778887655 34689999999999999999999999999999999999987 45899999999875
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000541 916 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVE-LNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~-l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..++-++||||....||.+||+|||..++..+.. +...+...+++.+.+- |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456799999999999999999999987655422 1112222666776663 5555565543 6999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||||.|+|||||+++|++|+|||||.||-|.-..+|.+.|+++.++ |.||+.+-+... ...+..|+.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999966 779999988754 45678999999985 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99863
No 168
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=334.70 Aligned_cols=210 Identities=29% Similarity=0.411 Sum_probs=174.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999999887 9999999988754332 3569999999988889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.++....+...+ ... .+....++.+++.+||++..++.++ .
T Consensus 92 ~e~l~~~~~~~~~~~~------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER------PPE------------------------AEIRAKVHELLKLVQLDWLADRYPA-----Q 136 (239)
T ss_pred HHHHhhhhhhcccccc------CCH------------------------HHHHHHHHHHHHHcCChhhhhcChh-----h
Confidence 9999987543211000 000 0011234568899999876666654 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++||.++|+..++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDE-LHVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999998653 356677789999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 169
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.8e-35 Score=333.12 Aligned_cols=206 Identities=21% Similarity=0.388 Sum_probs=173.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIG 243 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 243 (1433)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 88 (232)
T cd03218 12 KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFR 88 (232)
T ss_pred CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccc
Confidence 346999999999999999999999999999999999999987 9999999988754332 246999999998999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
.+||+||+.+.....+. .+. +....++.+++.+||++..++.++
T Consensus 89 ~~tv~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-- 132 (232)
T cd03218 89 KLTVEENILAVLEIRGL----------SKK------------------------EREEKLEELLEEFHITHLRKSKAS-- 132 (232)
T ss_pred cCcHHHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhhCChh--
Confidence 99999999886432211 000 011234668889999877766654
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.+++|++++|+
T Consensus 133 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~ 207 (232)
T cd03218 133 ---SLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD--RGIGVLITDHNVRETLSITDRAYIIY 207 (232)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999998864 35677778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|++++.|+.+++.
T Consensus 208 ~G~i~~~~~~~~~~ 221 (232)
T cd03218 208 EGKVLAEGTPEEIA 221 (232)
T ss_pred CCeEEEEeCHHHhh
Confidence 99999999987753
No 170
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=335.44 Aligned_cols=214 Identities=26% Similarity=0.379 Sum_probs=180.3
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67888887763 2469999999999999999999999999999999999876 46899999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
.. ..++.++|++|++.+++.+||.||+.+...++. ..+.++.+..++++++.+++.+..+.. .+.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 134679999999988899999999987643321 122334455678899999997765554 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.+.|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999974 57788999999985 8999988
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 171
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=332.81 Aligned_cols=205 Identities=29% Similarity=0.412 Sum_probs=173.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCCCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHDNHIG 243 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 243 (1433)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 9999999998764321 356999999998899
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
.+||+||+.++....+. ... .....++.+++.+||++..+..+.
T Consensus 96 ~~t~~e~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-- 139 (233)
T cd03258 96 SRTVFENVALPLEIAGV----------PKA------------------------EIEERVLELLELVGLEDKADAYPA-- 139 (233)
T ss_pred CCcHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHCCChhhhhcChh--
Confidence 99999999886543211 000 011234568899999877766554
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. ++++|++++|+.+++.+++|++++|+
T Consensus 140 ---~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 140 ---QLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 69999999999999999999999999999999999999999999997653 35677778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 172
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-36 Score=365.03 Aligned_cols=215 Identities=27% Similarity=0.435 Sum_probs=182.1
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+|+|+.. ++..+|+|+||+++|||.|||+||||+||||+.++|-...+ |.+|+|.+||+|
T Consensus 464 G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 479999999999754 34679999999999999999999999999999999998887 669999999999
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHH-----HHHHHHHHcCCcccccccccCCCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKM-----FIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
+++ ..+++.+|+|.|++.+|. -||+||+.|+.. ..+.++... .+++.+ .++.+-.|+.||..|
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG- 602 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKG- 602 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCcc-
Confidence 765 456789999999999986 499999999753 223332221 122223 345566899999876
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++|||||++||.||+|||.||.||+++...|.++|.++.+ ++|||++.|+. ...+.+|+|+++++ |
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRL--STV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRL--STVRHADQIVVIDK-G 678 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhh--hHhhhccEEEEEcC-C
Confidence 47999999999999999999999999999999999999999999998865 59999999985 57899999999986 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|..
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 99999963
No 173
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=343.91 Aligned_cols=218 Identities=25% Similarity=0.305 Sum_probs=179.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++... ...+.+|+|||+++++||++||+|+||||||||+++|+|... +.+|+|.++|+++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 68899998884210 011359999999999999999999999999999999999887 46899999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 Q-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
. ..+++.+|||+|++. .+...||+||+.|..... ..+..+.++.++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999852 333579999998875322 223344456788999999996 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|.+ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999975 56778999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999985
No 174
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.3e-35 Score=329.94 Aligned_cols=206 Identities=25% Similarity=0.358 Sum_probs=172.7
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+++|++++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 5678887763 2469999999999999999999999999999999999876 468999999987632
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 917 -----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 917 -----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
...++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++.+..+..+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345679999999988999999999987642111 1223334456788999999987666653 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877999999999975 56678999999986 54
No 175
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.8e-36 Score=315.64 Aligned_cols=212 Identities=24% Similarity=0.407 Sum_probs=191.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+++++|+.+. +++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|+|.++|.+.+
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchh
Confidence 5677776654 46789999999999999999999999999999999999988 56999999999887
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 916 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 916 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
+. .+.++||.|.+.-++|.+||.|.|.|-|.|+ .++..+.+...+.+|+.+++.......+ +.||.|++|+
T Consensus 68 ~~-~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQK 138 (300)
T COG4152 68 QE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQK 138 (300)
T ss_pred hh-hhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHH
Confidence 54 3456899999999999999999999999987 4567777788999999999998887764 6799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
+.+-.+++++|++++||||+|||||.+.+.+-+.+.++.++|.|||+++|+.. .+-++||++++|++ |+.|.+|++
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999999999999999999964 57788999999986 899999997
No 176
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.1e-35 Score=330.15 Aligned_cols=209 Identities=24% Similarity=0.321 Sum_probs=174.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788888762 12359999999999999999999999999999999999886 56899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. .+++.++|++|++.+++..|++|++.+....+ ..+..+..+.++++++.+++.+..++. ...||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 13567999999998888999999998865432 122333445678899999998766654 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 99999999999999999999999999999999999999999999877899999999975 45667899999986 6753
No 177
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.9e-35 Score=332.06 Aligned_cols=217 Identities=24% Similarity=0.302 Sum_probs=172.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.+... .....+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888876310 001259999999999999999999999999999999999876 46899999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 Q------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
. ..+++.++|++|++ .+.+.+||+||+.+......+. ......+...+++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4667899999998765433211 11111122235788888884 444544 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+.+.+|++++|.+ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 899999999975 45567999999985 7
Q ss_pred EEEEEc
Q 000541 1066 QEIYVG 1071 (1433)
Q Consensus 1066 ~~~y~G 1071 (1433)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 178
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-35 Score=344.88 Aligned_cols=206 Identities=27% Similarity=0.392 Sum_probs=177.9
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 245 (1433)
++.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 14 ~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~ 90 (301)
T TIGR03522 14 TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDM 90 (301)
T ss_pred CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCC
Confidence 356999999999999999999999999999999999999988 999999998875422 235799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.|.++..+... .+....++.+++.+||++..++.++
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~---- 132 (301)
T TIGR03522 91 YVREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG---- 132 (301)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh----
Confidence 99999998765432100 0011235678999999988877765
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+||+++|++++|||||+|||+.++..+.+.++++. . +++|+.++|..+++.++||+|++|++|
T Consensus 133 -~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~-~~tiii~sH~l~~~~~~~d~i~~l~~G 208 (301)
T TIGR03522 133 -QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--K-DKTIILSTHIMQEVEAICDRVIIINKG 208 (301)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--C-CCEEEEEcCCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999874 2 467788999999999999999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+.+++..
T Consensus 209 ~i~~~g~~~~~~~ 221 (301)
T TIGR03522 209 KIVADKKLDELSA 221 (301)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999998765
No 179
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.3e-35 Score=328.61 Aligned_cols=195 Identities=24% Similarity=0.367 Sum_probs=165.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999998875432 235799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++.+..+.. .. +....++.+++.+||++..++.++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 137 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------PR------------------------DANERVSAALEKVGLEGKAHALPM- 137 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCChh-
Confidence 9999999999875432110 00 011234568899999877776654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||++++|
T Consensus 138 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 138 ----QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 5999999999999999999999999999999999999999999998854 3 566777999999999999999999
Q ss_pred cCCeE
Q 000541 403 SDGQI 407 (1433)
Q Consensus 403 ~~G~i 407 (1433)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 180
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=342.16 Aligned_cols=218 Identities=25% Similarity=0.344 Sum_probs=179.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++... ...+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|+++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67899998884110 011359999999999999999999999999999999999887 56899999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 Q-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
. ..+++.+||++|++. .+...||.|++.|..... ..+..+.++++.++++.+++. +..+.. +.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PF 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cc
Confidence 1 134567999999862 333469999999875432 233445566788999999995 455543 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~ 221 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GH 221 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999974 46678999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 222 i~~~g~~ 228 (288)
T PRK13643 222 IISCGTP 228 (288)
T ss_pred EEEECCH
Confidence 9999986
No 181
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-35 Score=327.80 Aligned_cols=200 Identities=31% Similarity=0.454 Sum_probs=169.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 46999999999999999999999999999999999999887 9999999988754332 3579999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.++.+..+.. .. +....++.+++.+||++..+..++ .
T Consensus 90 ~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------KD------------------------EIDERVREVAELLQIEHLLDRKPK-----Q 130 (213)
T ss_pred HHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhCChh-----h
Confidence 99998865432110 00 011234668899999877776665 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +++|++++|+.+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 99999999999999999999999999999999999999999999986533 56677789999999999999999999999
Q ss_pred EEec
Q 000541 408 VYQG 411 (1433)
Q Consensus 408 v~~G 411 (1433)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 182
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=336.17 Aligned_cols=214 Identities=21% Similarity=0.273 Sum_probs=180.1
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ .+.+|+|+|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478999998773 2469999999999999999999999999999999999877 4589999999865
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHH-hcCCCCCChhHHHHHHHHHHHHcCCcccc-
Q 000541 915 KQ----------------ETFARISGYCEQNDIHSPNVTVYESLLYSAW-LRLPLEVDSPTRKMFIEEVMELVELNPLR- 976 (1433)
Q Consensus 915 ~~----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~-lr~~~~~~~~~~~~~v~~vl~~l~l~~~~- 976 (1433)
.. ..+++.++|++|++.+++.+||+||+.+... .. ....+..++.+.++++.+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1335679999999999999999999987542 21 122344456678899999997653
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhc
Q 000541 977 QALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFD 1056 (1433)
Q Consensus 977 ~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd 1056 (1433)
+.. ...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 433 3579999999999999999999999999999999999999999999999877999999999975 4566789
Q ss_pred ceeEEecCcEEEEEcCC
Q 000541 1057 ELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1057 ~~~ll~~gG~~~y~G~~ 1073 (1433)
++++|.+ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999985 899998875
No 183
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-35 Score=345.59 Aligned_cols=228 Identities=26% Similarity=0.389 Sum_probs=185.3
Q ss_pred CCCCCceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeeceEEEEeCCeEEEEEcCCCCc
Q 000541 115 GISLPTIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDVSGIIRPGRMTLLLGPPASG 194 (1433)
Q Consensus 115 ~~~~p~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSG 194 (1433)
.+..|.-.|+|+|++++.. .+++||+++||+|++||-+||+|+||||
T Consensus 344 ~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGsG 390 (591)
T KOG0057|consen 344 PIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGSG 390 (591)
T ss_pred CcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCCC
Confidence 5566667899999998752 2345999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhh
Q 000541 195 KTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELS 271 (1433)
Q Consensus 195 KSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 271 (1433)
|||+|++|.++.+ + +|+|.+||+++.+... ++.||||||+.. +.+-||.+||.+|..-- -..++-
T Consensus 391 KSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~-LFndTIl~NI~YGn~sa-------s~eeV~ 458 (591)
T KOG0057|consen 391 KSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSV-LFNDTILYNIKYGNPSA-------SDEEVV 458 (591)
T ss_pred HHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccc-ccchhHHHHhhcCCCCc-------CHHHHH
Confidence 9999999999998 5 9999999999877654 578999999765 45669999999974211 112222
Q ss_pred HHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEE
Q 000541 272 RREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFM 351 (1433)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illl 351 (1433)
+..|.++ ..|.+. .|++..+|.||+++.. |||||||||++|||++.+|+|+++
T Consensus 459 e~~k~a~-----------------------~hd~i~---~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~~ 511 (591)
T KOG0057|consen 459 EACKRAG-----------------------LHDVIS---RLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILLL 511 (591)
T ss_pred HHHHHcC-----------------------cHHHHH---hccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEEe
Confidence 2222221 122232 3899999999998875 999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHH
Q 000541 352 DEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 352 DEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 418 (1433)
|||||.||+.|..++++.+.+. .++.|+|.+.|+. .+..-||+|++|++|++...|+.+|++.
T Consensus 512 DEaTS~LD~~TE~~i~~~i~~~---~~~rTvI~IvH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 512 DEATSALDSETEREILDMIMDV---MSGRTVIMIVHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred cCcccccchhhHHHHHHHHHHh---cCCCeEEEEEecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 9999999999999999999983 3456666677776 4567799999999999999999999875
No 184
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=343.51 Aligned_cols=218 Identities=24% Similarity=0.304 Sum_probs=179.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|+++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 77899999884210 011359999999999999999999999999999999999987 45899999986531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHH
Q 000541 916 ---------------------------QETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVM 967 (1433)
Q Consensus 916 ---------------------------~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl 967 (1433)
....++.+|||+|++ ..+...||+|++.|..... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3445679999998865432 234445566789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000541 968 ELVELN-PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1046 (1433)
Q Consensus 968 ~~l~l~-~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hq 1046 (1433)
+.+||. +..+.. ...||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566654 35799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1047 PSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1047 p~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++ .+.+.+|++++|.+ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 64 46788999999975 899999986
No 185
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.5e-35 Score=331.52 Aligned_cols=212 Identities=27% Similarity=0.396 Sum_probs=177.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999876 46899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 QE--TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~~--~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
.. ...+.++|++|++.+++.+|++|++.+.+..+ ........+.++++++.+++.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22356899999988888999999998765432 1223334456788999999987666543 47999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|.+ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999985 58999999999753 3 45999999985 89999887
Q ss_pred C
Q 000541 1073 L 1073 (1433)
Q Consensus 1073 ~ 1073 (1433)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 186
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.4e-35 Score=333.91 Aligned_cols=214 Identities=24% Similarity=0.317 Sum_probs=176.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcCc
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISGY 912 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 912 (1433)
++++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56888888763 235999999999999999999999999999999999987632 12899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc----ccccccccCC
Q 000541 913 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN----PLRQALVGLP 983 (1433)
Q Consensus 913 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~vg~~ 983 (1433)
+... ...++.++|++|+..+++ .|++||+.+....+. ..+..+.++.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 133567999999988888 999999988654331 112234445678899999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|.+
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999876 489999999975 46678999999986
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 187
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=340.85 Aligned_cols=215 Identities=26% Similarity=0.400 Sum_probs=180.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 588999998873 12359999999999999999999999999999999999887 5689999999876
Q ss_pred Cc-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000541 915 KQ-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGL 988 (1433)
Q Consensus 915 ~~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~L 988 (1433)
.. ..+++.+||++|++. .+...||+|++.+..... ..+..+..+.++++++.+++.+..++. .+.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 234567999999863 345679999998764322 223344456788999999998877765 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 989 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 989 SgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999975 35568999999986 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999986
No 188
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-36 Score=318.84 Aligned_cols=207 Identities=28% Similarity=0.384 Sum_probs=180.0
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQET----FARISGYCEQNDIHSP 934 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~----~~~~~gyv~Q~d~~~~ 934 (1433)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++.... .+..++.-+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 45689999999999999999999999999999999999988 56999999999875422 2445788999999999
Q ss_pred CCCHHHHHHHHHHhc--------CCCC-CChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000541 935 NVTVYESLLYSAWLR--------LPLE-VDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVAN 1005 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr--------~~~~-~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~ 1005 (1433)
.+||.||+..++..+ .+.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||+++
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 999999998876533 1211 1234455678889999999999999865 6999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 1006 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1006 p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.+ -++..+|++++|.. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCHH
Confidence 9999999999999999999999999999974 799999999976 47889999999986 8999999973
No 189
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-35 Score=329.72 Aligned_cols=199 Identities=29% Similarity=0.429 Sum_probs=163.6
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCC--CCCCH
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHS--PNVTV 938 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~--~~lTv 938 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. +..||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999876 46899999998653 3456799999997653 34899
Q ss_pred HHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 000541 939 YESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1017 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsg 1017 (1433)
+||+.+....+... .......++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321100 011223345678899999998766654 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 1018 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 1018 LD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999878999999999975 46677899999974 4 66654
No 190
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.8e-35 Score=329.48 Aligned_cols=208 Identities=25% Similarity=0.360 Sum_probs=177.0
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 5677777653 2469999999999999999999999999999999999876 568999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000541 917 ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRL 996 (1433)
Q Consensus 917 ~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl 996 (1433)
.. .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.+++.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2578999999988899999999987654331 11 234678899999987766653 57999999999
Q ss_pred HHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCC
Q 000541 997 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 997 ~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~ 1074 (1433)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++.|++.
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999975 46678999999985 8999999864
No 191
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=341.67 Aligned_cols=205 Identities=25% Similarity=0.367 Sum_probs=170.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCC-----------------------
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDE----------------------- 225 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~----------------------- 225 (1433)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 8999999875421
Q ss_pred ----CcccceEEEEcCCC-CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhh
Q 000541 226 ----FVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEAS 300 (1433)
Q Consensus 226 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (1433)
...++.++||+|++ ..+...||+|||.|+....+.. + .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------~------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------K------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------H------------------------HHHH
Confidence 01235699999985 4556789999999976533210 0 0111
Q ss_pred HHHHHHHHHhCCC-ccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000541 301 VVTDYILKILGLD-VCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKG 379 (1433)
Q Consensus 301 ~~~~~il~~lgL~-~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~ 379 (1433)
..++.+++.+||+ +..+..+ ..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~--~g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK--QG 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH--CC
Confidence 2356788999996 5556554 46999999999999999999999999999999999999999999999863 35
Q ss_pred eEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHH
Q 000541 380 TTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 380 t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
++|++++|+.+++.+++|+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 67777999999999999999999999999999998875
No 192
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=344.86 Aligned_cols=218 Identities=23% Similarity=0.337 Sum_probs=179.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|+++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 589999999885210 012359999999999999999999999999999999999987 5689999999765
Q ss_pred Cc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc
Q 000541 915 KQ-------------------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN 973 (1433)
Q Consensus 915 ~~-------------------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~ 973 (1433)
.. ...++.+|||+|++ .+++ .||+||+.|..... ..+.++..++++++++.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13456799999986 3454 59999998864321 223344455788899999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000541 974 -PLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIV 1052 (1433)
Q Consensus 974 -~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~ 1052 (1433)
+..+.. ...||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455443 3579999999999999999999999999999999999999999999999877999999999964 466
Q ss_pred HHhcceeEEecCcEEEEEcCC
Q 000541 1053 EAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1053 ~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
+.+|++++|.+ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 78999999986 899999985
No 193
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=328.37 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=169.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999988753 246799999998888899999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||+.++....+.. .. .....++.+++.+||++..+..++ .|
T Consensus 92 e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~L 132 (220)
T cd03293 92 DNVALGLELQGVP----------KA------------------------EARERAEELLELVGLSGFENAYPH-----QL 132 (220)
T ss_pred HHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCcc-----cC
Confidence 9999875432110 00 011234568899999877676654 59
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS--DGQ 406 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 406 (1433)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRE-TGKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987543 35667778999999999999999999 799
Q ss_pred EEEecCh
Q 000541 407 IVYQGPR 413 (1433)
Q Consensus 407 iv~~G~~ 413 (1433)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988765
No 194
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=341.32 Aligned_cols=218 Identities=23% Similarity=0.361 Sum_probs=177.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------cccceEEEEcCCC-C
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------VPQRTAAYISQHD-N 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 240 (1433)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 99999999987531 1135699999985 3
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 319 (1433)
.+...||+||+.|+.+..+.. .. +....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EE------------------------DAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHCCCChhhhhCC
Confidence 454679999999875432210 00 0112356789999997 455655
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .++||++++|+.+++.++||+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 5 469999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHH---HHHHhcCCCCCC
Q 000541 400 ILISDGQIVYQGPREHVL---EFFKFMGFECPK 429 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~ 429 (1433)
++|++|+++++|+++++. ..+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999998874 234444554443
No 195
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.7e-35 Score=328.07 Aligned_cols=211 Identities=25% Similarity=0.350 Sum_probs=172.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++.. .+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5678888876311 112469999999999999999999999999999999999877 46899999998754
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000541 916 QE---T---FA-RISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGL 988 (1433)
Q Consensus 916 ~~---~---~~-~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~L 988 (1433)
.. . ++ +.++|++|++.+++.+||+|++.+....+. ....+..+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 568999999988889999999988654321 122333456788999999987666553 579
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 989 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 989 SgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ..+.+|++++|.+ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~--~~~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE--LAKKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999975 3455799999985 665
Q ss_pred E
Q 000541 1068 I 1068 (1433)
Q Consensus 1068 ~ 1068 (1433)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 196
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.8e-35 Score=329.35 Aligned_cols=203 Identities=25% Similarity=0.438 Sum_probs=169.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 46999999999999999999999999999999999999987 9999999988754332 3469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHh-CCCccccccccCc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKIL-GLDVCADTMVGDE 323 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 323 (1433)
+||+||+.++....+ .. + ....++.+++.+ ++++..++.++
T Consensus 90 ~t~~~~l~~~~~~~~---~~----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~~-- 131 (222)
T cd03224 90 LTVEENLLLGAYARR---RA----K-----------------------------RKARLERVYELFPRLKERRKQLAG-- 131 (222)
T ss_pred CcHHHHHHHHhhhcC---ch----h-----------------------------HHHHHHHHHHHHHhhhhhhhCchh--
Confidence 999999998653221 00 0 001233456666 46665565554
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+++|++++|+..++.+++|+|++|+
T Consensus 132 ---~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 132 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD--EGVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhccEEEEee
Confidence 5999999999999999999999999999999999999999999999864 35677778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|+++..|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987753
No 197
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.3e-35 Score=329.50 Aligned_cols=203 Identities=29% Similarity=0.431 Sum_probs=172.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 246 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 56999999999999999999999999999999999999987 999999998875321 2356999999998888999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.+..+..+.. .. +....++.+++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLP----------KS------------------------EIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 999999865432210 00 011234568889999877777665
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ + ++++.++|+.+++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998753 3 677778999999999999999999999
Q ss_pred EEEecChhHH
Q 000541 407 IVYQGPREHV 416 (1433)
Q Consensus 407 iv~~G~~~~~ 416 (1433)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 198
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=334.89 Aligned_cols=206 Identities=21% Similarity=0.279 Sum_probs=176.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 489999998873 2359999999999999999999999999999999999876 4589999999765
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
. ..++.++|++|++.+++.+||+||+.+... ...+..++++++.+++.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK---------GQWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc---------chHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 345679999999988888999999987421 01234577899999998766654 3579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+.+.+|++++|.+ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999975 46677999999985 899988764
No 199
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-35 Score=336.72 Aligned_cols=216 Identities=22% Similarity=0.360 Sum_probs=177.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCC-CCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHD-NHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 244 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998764322 35799999996 46788
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.|+.+..+. .. .+....++.+++.+||++..+..++
T Consensus 97 ~tv~eni~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13650 97 ATVEDDVAFGLENKGI----------PH------------------------EEMKERVNEALELVGMQDFKEREPA--- 139 (279)
T ss_pred ccHHHHHHhhHHhCCC----------CH------------------------HHHHHHHHHHHHHCCCHhHhhCCcc---
Confidence 9999999987543221 00 0111235678999999877776654
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .++||++++|+.+++ ..+|+|++|++
T Consensus 140 --~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 140 --RLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDD-YQMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 356777788988888 58999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 000541 405 GQIVYQGPREHVLE---FFKFMGFECP 428 (1433)
Q Consensus 405 G~iv~~G~~~~~~~---~f~~~G~~~p 428 (1433)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999988753 2334454433
No 200
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=332.74 Aligned_cols=212 Identities=23% Similarity=0.341 Sum_probs=176.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
-++++|+++.++ .+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 378899998763 2369999999999999999999999999999999999877 4689999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000541 915 KQE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELV-ELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 915 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l-~l~~~~~~~vg~~~~~~LS 989 (1433)
... ..++.++|++|+..+++.+||.||+.+..... ......+.++++++.+ ++.+..+.. ...||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 13467999999998899999999998754221 1122234466777777 465544443 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999974 57788999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 201
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-35 Score=326.46 Aligned_cols=198 Identities=26% Similarity=0.397 Sum_probs=168.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999999887 9999999987754 2346799999999888999999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||+.+..+..+.. .. +....++.+++.+||++..++.++ .|
T Consensus 89 e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~L 129 (210)
T cd03269 89 DQLVYLAQLKGLK----------KE------------------------EARRRIDEWLERLELSEYANKRVE-----EL 129 (210)
T ss_pred HHHHHHHHHcCCC----------hH------------------------HHHHHHHHHHHHcCChHHHhCcHh-----hC
Confidence 9998865432210 00 011234568889999877776554 59
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIV 408 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 408 (1433)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+.+++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR--AGKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998764 2567777999999999999999999999998
Q ss_pred Eec
Q 000541 409 YQG 411 (1433)
Q Consensus 409 ~~G 411 (1433)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 202
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=335.26 Aligned_cols=218 Identities=22% Similarity=0.266 Sum_probs=179.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478899988763 2469999999999999999999999999999999999877 5689999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC----------CCC--ChhHHHHHHHHHHHHcCCcccccc
Q 000541 915 KQE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLP----------LEV--DSPTRKMFIEEVMELVELNPLRQA 978 (1433)
Q Consensus 915 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~----------~~~--~~~~~~~~v~~vl~~l~l~~~~~~ 978 (1433)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999886432110 000 111233457788999999776665
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcc
Q 000541 979 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDE 1057 (1433)
Q Consensus 979 ~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~ 1057 (1433)
. ...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999875 899999999975 56678999
Q ss_pred eeEEecCcEEEEEcCCC
Q 000541 1058 LFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1058 ~~ll~~gG~~~y~G~~~ 1074 (1433)
+++|.+ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 8999998863
No 203
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2e-35 Score=331.54 Aligned_cols=204 Identities=24% Similarity=0.362 Sum_probs=169.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCcceEEEECCccCCCCc-----ccceEEEEcCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL-----DSSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQH 238 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 238 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 46999999999999999999999999999999999999 776 999999998875432 23579999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
+.++ .+||+||+.++.+..+... . .+....++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL---------K------------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8777 8999999998754321100 0 0011234568889999876555
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.+. ...|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|++++|+.+++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 430 247999999999999999999999999999999999999999999999854 3 6777799999999999999
Q ss_pred EEEecCCeEEEecChhH
Q 000541 399 IILISDGQIVYQGPREH 415 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~ 415 (1433)
+++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998765
No 204
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-35 Score=327.73 Aligned_cols=193 Identities=27% Similarity=0.389 Sum_probs=162.2
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc---ccccceEEEeccCCC-CCCCC
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ---ETFARISGYCEQNDI-HSPNV 936 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~-~~~~l 936 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999876 468999999987542 234567899999974 46678
Q ss_pred CHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000541 937 TVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1016 (1433)
Q Consensus 937 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTs 1016 (1433)
|++||+.+....+ .......++.++++++.+++.+..+.. ...||||||||++||++|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 122233345678899999997766654 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 1017 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 1017 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|.+|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999974 455669999999863
No 205
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=340.48 Aligned_cols=218 Identities=21% Similarity=0.322 Sum_probs=179.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 378899998884210 012359999999999999999999999999999999999887 4689999999876
Q ss_pred Cc-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000541 915 KQ-------ETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPG 984 (1433)
Q Consensus 915 ~~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~ 984 (1433)
.. ..+++.+|||+|++ .+++ .||.||+.|..... ..+..+..+.++++++.+||. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~----- 142 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS----- 142 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----
Confidence 32 13456799999985 3444 59999998864322 223444556788999999996 555554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|.+
T Consensus 143 ~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 143 PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999976 4899999999964 46678999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 899999985
No 206
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=332.45 Aligned_cols=214 Identities=29% Similarity=0.419 Sum_probs=173.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 999999998876543 135699999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++..... .....+ .+... ......++.+++.+||++..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~-----~~~~~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-----STWRSL------FGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc-----hhhhhh------cccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999988642110 000000 00000 001123456789999987666555
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINRE-EGITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 3566777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 207
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=348.85 Aligned_cols=208 Identities=23% Similarity=0.332 Sum_probs=177.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD 239 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 239 (1433)
+...+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|+.
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~ 115 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSF 115 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCC
Confidence 4456899999999999999999999999999999999999987 9999999998765432 24699999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+++.+||+||+.|+.+..+.. .. +....++.+++.+||++..++.
T Consensus 116 ~l~~~~Tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~e~L~~~gL~~~~~~~ 161 (400)
T PRK10070 116 ALMPHMTVLDNTAFGMELAGIN----------AE------------------------ERREKALDALRQVGLENYAHSY 161 (400)
T ss_pred cCCCCCCHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhhcC
Confidence 9999999999999976543210 00 0112346689999998777765
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+. .|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|+|
T Consensus 162 ~~-----~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~-~g~TIIivTHd~~~~~~~~Dri 235 (400)
T PRK10070 162 PD-----ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAK-HQRTIVFISHDLDEAMRIGDRI 235 (400)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-CCCeEEEEECCHHHHHHhCCEE
Confidence 54 69999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|+++..|+++++.
T Consensus 236 ~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 236 AIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEEECCEEEecCCHHHHH
Confidence 999999999999998874
No 208
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-35 Score=331.36 Aligned_cols=206 Identities=27% Similarity=0.430 Sum_probs=172.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999987 9999999988754322 35689999999899999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc--cccccccCc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV--CADTMVGDE 323 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~~ 323 (1433)
||+||+.++.+..+.. .. +....++.+++.+||++ ..++.+
T Consensus 91 tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~l~l~~~~~~~~~~--- 133 (242)
T cd03295 91 TVEENIALVPKLLKWP----------KE------------------------KIRERADELLALVGLDPAEFADRYP--- 133 (242)
T ss_pred cHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCCcHHHHhcCh---
Confidence 9999999865432110 00 01123456888999985 445444
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 134 --HELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999998653 35677778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|++++.|+++++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987763
No 209
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=336.31 Aligned_cols=204 Identities=25% Similarity=0.325 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 244 (1433)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 18 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (274)
T PRK13647 18 TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFS 94 (274)
T ss_pred CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhcc
Confidence 35999999999999999999999999999999999999987 9999999998764332 356999999863 5667
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||+||+.|+.+..+. .+ .+....++.+++.+||.+..++.+.
T Consensus 95 ~tv~e~l~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~--- 137 (274)
T PRK13647 95 STVWDDVAFGPVNMGL----------DK------------------------DEVERRVEEALKAVRMWDFRDKPPY--- 137 (274)
T ss_pred CcHHHHHHhhHHHcCC----------CH------------------------HHHHHHHHHHHHHCCCHHHhcCChh---
Confidence 8999999986532211 00 0011235678899999877776665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ . +.||+.++|+.+++.++||+|++|++
T Consensus 138 --~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 138 --HLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKE 213 (274)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999864 3 56777799999999999999999999
Q ss_pred CeEEEecChhHH
Q 000541 405 GQIVYQGPREHV 416 (1433)
Q Consensus 405 G~iv~~G~~~~~ 416 (1433)
|++++.|+++++
T Consensus 214 G~i~~~g~~~~~ 225 (274)
T PRK13647 214 GRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCHHHh
Confidence 999999998654
No 210
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=338.29 Aligned_cols=216 Identities=24% Similarity=0.320 Sum_probs=181.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37899999887411 12359999999999999999999999999999999999987 5699999999876
Q ss_pred Cc---ccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQND-IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.+||++|++ ..++..||+||+.|..... ..+.++..+.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 23456799999997 3677889999998865322 2334445567889999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|.+ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999975 34 67999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9885
No 211
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.8e-35 Score=333.66 Aligned_cols=214 Identities=23% Similarity=0.323 Sum_probs=179.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35788888763 2369999999999999999999999999999999999877 46899999998653
Q ss_pred c----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccccc
Q 000541 916 Q----------------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQAL 979 (1433)
Q Consensus 916 ~----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~ 979 (1433)
. ...++.++|++|++.+++..|+.||+.+..... .........+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999999999999998753211 1122334445678899999998766654
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcce
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDEL 1058 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~ 1058 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998865 899999999975 466789999
Q ss_pred eEEecCcEEEEEcCC
Q 000541 1059 FLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1059 ~ll~~gG~~~y~G~~ 1073 (1433)
++|.+ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899998875
No 212
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=340.79 Aligned_cols=218 Identities=21% Similarity=0.395 Sum_probs=175.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------------------ccc
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------------------VPQ 229 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------------------~~~ 229 (1433)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999987 99999999886532 113
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHH
Q 000541 230 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILK 308 (1433)
Q Consensus 230 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 308 (1433)
+.++||+|++. .+...||+||+.|+....+. .. .+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~----------~~------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGV----------KK------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCC----------CH------------------------HHHHHHHHHHHH
Confidence 57999999862 34456999999987532211 00 001123456889
Q ss_pred HhCCC-ccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 000541 309 ILGLD-VCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQ 387 (1433)
Q Consensus 309 ~lgL~-~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q 387 (1433)
.+||+ +..++. +..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. +++||++++|
T Consensus 162 ~~gL~~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~--~g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA--NNKTVFVITH 234 (320)
T ss_pred HcCCChhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEec
Confidence 99996 344444 346999999999999999999999999999999999999999999998754 3567777999
Q ss_pred ChhhHHhhcCeEEEecCCeEEEecChhHHH---HHHHhcCCCCCCC
Q 000541 388 PAPETYDLFDDIILISDGQIVYQGPREHVL---EFFKFMGFECPKR 430 (1433)
Q Consensus 388 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~ 430 (1433)
+.+++.++||+|++|++|++++.|+++++. +.++..|+.+|..
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~ 280 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRV 280 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChH
Confidence 999999999999999999999999998874 2344556555543
No 213
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=321.49 Aligned_cols=196 Identities=31% Similarity=0.573 Sum_probs=164.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCcc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYP 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~ 913 (1433)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 58999999998643 13457999999999999999999999999999999999987632 568999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 914 KKQ--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 914 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
... ...++.++|++|++.+++.+||+|++.+.+..+ .+.. ...||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998754211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|.+ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777777654567788999999986 888876
Q ss_pred c
Q 000541 1071 G 1071 (1433)
Q Consensus 1071 G 1071 (1433)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 214
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6e-35 Score=345.98 Aligned_cols=211 Identities=26% Similarity=0.334 Sum_probs=179.0
Q ss_pred cccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCc----cCCCCcc-------cceE
Q 000541 164 SRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGH----DMDEFVP-------QRTA 232 (1433)
Q Consensus 164 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~----~~~~~~~-------~~~~ 232 (1433)
++.+...+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|. ++..... ++.+
T Consensus 32 ~~~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 32 DETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred HhhCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 3456678999999999999999999999999999999999999987 999999996 3332211 1469
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCC
Q 000541 233 AYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGL 312 (1433)
Q Consensus 233 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL 312 (1433)
+||+|+..+++.+||+||+.|+....+.. +. +....++++++.+||
T Consensus 109 ~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~----------~~------------------------~~~~~a~e~le~vgL 154 (382)
T TIGR03415 109 SMVFQKFALMPWLTVEENVAFGLEMQGMP----------EA------------------------ERRKRVDEQLELVGL 154 (382)
T ss_pred EEEECCCcCCCCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCC
Confidence 99999999999999999999986543211 00 011235668999999
Q ss_pred CccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhH
Q 000541 313 DVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPET 392 (1433)
Q Consensus 313 ~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 392 (1433)
++..|..++ .|||||||||+|||||+.+|+|+||||||+|||+.++.++.+.|+++.+.. ++||+.++|+.+++
T Consensus 155 ~~~~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~ 228 (382)
T TIGR03415 155 AQWADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEA 228 (382)
T ss_pred chhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHH
Confidence 887776665 599999999999999999999999999999999999999999999986533 56777799999999
Q ss_pred HhhcCeEEEecCCeEEEecChhHHH
Q 000541 393 YDLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 393 ~~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
.+++|+|++|++|+++..|+++++.
T Consensus 229 ~~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 229 LKIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999998875
No 215
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=336.81 Aligned_cols=213 Identities=22% Similarity=0.331 Sum_probs=178.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ +++.+|+|||++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788888763 12359999999999999999999999999999999999877 56899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 Q----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ...++.+||++|++. .+...|+.||+.|..... ..+....++.++++++.+++.+..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 466789999998765332 1233444566888999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|.+ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 34 67999999985 899999
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 216
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=331.22 Aligned_cols=213 Identities=24% Similarity=0.322 Sum_probs=178.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67889988763 2359999999999999999999999999999999999876 46899999998652
Q ss_pred ---------cccccceEEEeccCCCCCCCCCHHHHHHHH-HHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 916 ---------QETFARISGYCEQNDIHSPNVTVYESLLYS-AWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 916 ---------~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~-a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
....++.++|++|++.+++.+||.||+.+. ...+ .....+....++++++.+|+.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 012345789999999999999999999643 2221 1122333456788999999987766653
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999975 45677999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99998875
No 217
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=339.28 Aligned_cols=219 Identities=25% Similarity=0.310 Sum_probs=179.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367889988774110 001359999999999999999999999999999999999887 5699999999875
Q ss_pred Cc-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000541 915 KQ-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGV 985 (1433)
Q Consensus 915 ~~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~ 985 (1433)
.. ...++.+||++|++. .+..+||.|++.|....+ ....++..++++++++.+++. +..+.. .
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----P 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----c
Confidence 32 123457999999863 333589999998765432 123344456788999999996 566655 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|.+ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999877999999999964 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 99999885
No 218
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=331.43 Aligned_cols=217 Identities=25% Similarity=0.288 Sum_probs=178.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 377889988763 235999999999999999999999999999999999987532 3689999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc----ccccccCCC
Q 000541 912 YPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL----RQALVGLPG 984 (1433)
Q Consensus 912 ~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~----~~~~vg~~~ 984 (1433)
.++.. ...++.+||++|++.+++.+||.||+.+....+.. ..+..+..+.++++++.+++.+. .+..
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~----- 143 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP----- 143 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----
Confidence 87642 23456799999999888999999999886543211 11223344567889999998542 2332
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. .+.+.+|++++|.+
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999864 899999999975 46678999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 899998875
No 219
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=6.3e-35 Score=331.11 Aligned_cols=219 Identities=23% Similarity=0.280 Sum_probs=175.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35788887763 24699999999999999999999999999999999998421156899999998754
Q ss_pred cc---cc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC----CCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 QE---TF-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL----EVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~~---~~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~----~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
.. .. +..++|++|++.+++.+|++|++.+........ ..+..+..+.++++++.+++. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 12 234899999999999999999998764332110 012223345678899999997 34554321 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEA-FDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~-fd~~~ll~~gG 1065 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|.+ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877999999999975 34455 699999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 99998875
No 220
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=332.18 Aligned_cols=220 Identities=25% Similarity=0.266 Sum_probs=178.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|+++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899998773 235999999999999999999999999999999999987642 3589999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000541 912 YPKK-----QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~ 985 (1433)
.++. ...+++.++|++|++.+++.+||.||+.+....+. ...+.+...+.++++++.+++.+. .+... ...
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~ 147 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNG-LVKSKKELDERVEWALKKAALWDEVKDRLN--DYP 147 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcC-ccCCHHHHHHHHHHHHHHcCCccchhhhhc--cCh
Confidence 8764 12345679999999999999999999988654321 101223334567888999887531 11111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++...+|++++|.+ |
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 224 (253)
T PRK14267 148 SNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-G 224 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999865 699999999975 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 225 ~i~~~~~~ 232 (253)
T PRK14267 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 99999885
No 221
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=336.66 Aligned_cols=214 Identities=25% Similarity=0.378 Sum_probs=179.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678899887731 1349999999999999999999999999999999999877 56999999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 Q---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
. ...++.++|++|++. .+...||.|++.+..... ..+.+..++.++++++.+++.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999963 344679999998765321 2333444556789999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999975 56688999999986 899999
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 985
No 222
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-35 Score=332.19 Aligned_cols=215 Identities=22% Similarity=0.250 Sum_probs=175.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999998773 235999999999999999999999999999999999987642 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc----ccccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN----PLRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~----~~~~~~vg~ 982 (1433)
.++.. ...++.++|++|++..++ .||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 899999988654321 112233345678888888874 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
.+.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ .+.+.+|++++|.
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999975 4667899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 223
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.8e-35 Score=341.56 Aligned_cols=229 Identities=20% Similarity=0.231 Sum_probs=183.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
-++++||+.+++............+...+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 48899999877532110000001123579999999999999999999999999999999999987 4589999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000541 915 KQE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGV 985 (1433)
Q Consensus 915 ~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~ 985 (1433)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+..+.++.++++++.+++. +..+.. .
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2356799999997 578899999999886543211 234455566788999999994 344443 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
..|||||||||+||+||+.+|++|++||||+|||..++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 899999999964 45567999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 899999985
No 224
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.8e-35 Score=349.53 Aligned_cols=210 Identities=25% Similarity=0.424 Sum_probs=177.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 244 (1433)
++++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 15 ~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~ 91 (402)
T PRK09536 15 DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFE 91 (402)
T ss_pred CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCC
Confidence 356999999999999999999999999999999999999987 9999999998765432 3679999999988899
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++..-... +. .... .+....++.+++.+||.+..++.+.
T Consensus 92 ~tv~e~v~~~~~~~~~--~~---~~~~-------------------------~~~~~~v~~~le~vgl~~~~~~~~~--- 138 (402)
T PRK09536 92 FDVRQVVEMGRTPHRS--RF---DTWT-------------------------ETDRAAVERAMERTGVAQFADRPVT--- 138 (402)
T ss_pred CCHHHHHHhccchhcc--cc---cCCC-------------------------HHHHHHHHHHHHHcCCchhhcCChh---
Confidence 9999999986421000 00 0000 0112346778999999887776654
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ . +++|++++|+.+++.++||++++|++
T Consensus 139 --~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~ 214 (402)
T PRK09536 139 --SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLAD 214 (402)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999874 3 56777799999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 215 G~iv~~G~~~ev~ 227 (402)
T PRK09536 215 GRVRAAGPPADVL 227 (402)
T ss_pred CEEEEecCHHHHh
Confidence 9999999998864
No 225
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.4e-35 Score=330.24 Aligned_cols=215 Identities=27% Similarity=0.342 Sum_probs=177.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 67888887763 2469999999999999999999999999999999999876 46899999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-----CCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 916 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-----EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-----~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.. ..++.++|++|++.+++.+||+||+.+........ ....+..+..++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 31 12346999999999999999999998864321100 011223345678899999998766654 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 799999999975 46678999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9988875
No 226
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.2e-35 Score=324.49 Aligned_cols=195 Identities=26% Similarity=0.402 Sum_probs=166.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-cccceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 56999999999999999999999999999999999999887 99999999876532 123569999999988999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.+.....+. ....++.+++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVK-----G 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHh-----h
Confidence 9999886532110 00124567888999877776654 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+.+++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD--QGITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 356677789999999999999999999999
Q ss_pred EEec
Q 000541 408 VYQG 411 (1433)
Q Consensus 408 v~~G 411 (1433)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 227
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.6e-35 Score=334.79 Aligned_cols=207 Identities=22% Similarity=0.356 Sum_probs=173.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+...+
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 45899999999999999999999999999999999999887 999999998875432 135699999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++...... .... .....++.+++.+||++..++.++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~- 142 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAP------------------------LLHSTVMMKLEAVGLRGAAKLMPS- 142 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHcCChhhhhCChh-
Confidence 999999999886432100 0000 011234567889999887777665
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|++++|
T Consensus 143 ----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 143 ----ELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 228
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-35 Score=332.79 Aligned_cols=213 Identities=26% Similarity=0.369 Sum_probs=178.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67889888763 2469999999999999999999999999999999999876 56899999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
. ...++.++|++|++.+++.+||+|++.+..... .......++.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223457899999988878899999998754221 1122233456788999999987666653 5799999
Q ss_pred HHHHHHHHHHh------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 993 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 993 rkRl~ia~~L~------~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ +.|+|||+++|++. ++.+.+|++++|.+ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999998 66899999999975 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 99998875
No 229
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4e-35 Score=327.09 Aligned_cols=195 Identities=28% Similarity=0.416 Sum_probs=163.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 999999998876432 13569999999989
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++....+.. .. .....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------KK------------------------ERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhcChh
Confidence 99999999999875432210 00 011234668899999877666554
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++. .||++++
T Consensus 140 -----~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 140 -----ELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKE-AGTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred -----hcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEECCHHHHh-hhcEEEE
Confidence 59999999999999999999999999999999999999999999998652 3566777889888876 9999999
Q ss_pred ecCCeE
Q 000541 402 ISDGQI 407 (1433)
Q Consensus 402 L~~G~i 407 (1433)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 230
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=324.31 Aligned_cols=208 Identities=26% Similarity=0.348 Sum_probs=171.4
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
.++|+++.++ ++. .|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~ 64 (211)
T cd03298 2 RLDKIRFSYG-------------EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTA 64 (211)
T ss_pred EEEeEEEEeC-------------CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCc
Confidence 5778887663 122 39999999999999999999999999999999987 568999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..++.++|++|++.+++.+||+||+.+....+.. . .+..++.++++++.+++.+..++.+ ..||||||||
T Consensus 65 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (211)
T cd03298 65 APPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQR 136 (211)
T ss_pred CCHhHccEEEEecccccCCCCcHHHHHhcccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHH
Confidence 1 2346799999999989999999999875432111 1 1233456788999999987766653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++..|
T Consensus 137 v~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 137 VALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999999999999999999999999999999998754 899999999974 45677999999985 7887654
No 231
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4e-35 Score=323.86 Aligned_cols=192 Identities=26% Similarity=0.373 Sum_probs=162.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCC-CCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 247 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 56999999999999999999999999999999999999987 9999999988754333457999999964 3557899
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.++....+. ....++.+++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCch-----h
Confidence 9999875432100 00124568899999887776664 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.+|+.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA--QGKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998854 356677789999999999999999999997
Q ss_pred E
Q 000541 408 V 408 (1433)
Q Consensus 408 v 408 (1433)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 232
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-35 Score=332.07 Aligned_cols=214 Identities=24% Similarity=0.294 Sum_probs=176.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588999988763 235999999999999999999999999999999999987531 3689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ..+++.++|++|++.+++ .|++||+.+....+ ..+....++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988777 89999998875432 1223333456788899998843 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
...|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|.
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999974 4567799999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 233
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-35 Score=347.25 Aligned_cols=207 Identities=27% Similarity=0.441 Sum_probs=167.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||++..+..+ +++++||+|++.++ .-
T Consensus 334 ~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~g 409 (559)
T COG4988 334 KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AG 409 (559)
T ss_pred CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-cc
Confidence 37899999999999999999999999999999999999987 9999999999877654 58899999998554 56
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|+||||.++.... +.+...++.. -..+.+.+.-++..||.+|+.+
T Consensus 410 TireNi~l~~~~~-------------------------s~e~i~~al~---------~a~l~~~v~~p~GLdt~ige~G- 454 (559)
T COG4988 410 TIRENILLARPDA-------------------------SDEEIIAALD---------QAGLLEFVPKPDGLDTVIGEGG- 454 (559)
T ss_pred cHHHHhhccCCcC-------------------------CHHHHHHHHH---------HhcHHHhhcCCCcccchhccCC-
Confidence 9999999963210 0000100000 0012233333667899999765
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
++|||||+|||++||||+.+++++++||||++||.+|...|.+.|.++++ .+|+++++|.... ..-+|+|++|++|
T Consensus 455 ~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~---~ktvl~itHrl~~-~~~~D~I~vld~G 530 (559)
T COG4988 455 AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK---QKTVLVITHRLED-AADADRIVVLDNG 530 (559)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh---CCeEEEEEcChHH-HhcCCEEEEecCC
Confidence 48999999999999999999999999999999999999999999999865 3555557777644 4567999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++.+|.++++.+
T Consensus 531 ~l~~~g~~~~L~~ 543 (559)
T COG4988 531 RLVEQGTHEELSE 543 (559)
T ss_pred ceeccCCHHHHhh
Confidence 9999999999864
No 234
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=336.26 Aligned_cols=215 Identities=25% Similarity=0.307 Sum_probs=180.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
-++++|+++.++. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3789999987731 12359999999999999999999999999999999999987 4689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.+||++|++. .++..||.||+.+..... ..+.++..+.++++++.++|.+..+... ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 667789999998865432 1233444566889999999988777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ +.+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 899999999975 33 56999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 235
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-35 Score=322.21 Aligned_cols=224 Identities=25% Similarity=0.370 Sum_probs=195.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD 239 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 239 (1433)
+...-++|+|++|+.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.++.|+|+.
T Consensus 39 g~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~F 115 (386)
T COG4175 39 GLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSF 115 (386)
T ss_pred CcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhh
Confidence 4455799999999999999999999999999999999999998 9999999999876543 35799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.++|+.||.||..|+.+.+|.+.. +.+.+..+.|+..||+...+..
T Consensus 116 aLlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y 161 (386)
T COG4175 116 ALLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY 161 (386)
T ss_pred ccccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC
Confidence 999999999999999999886321 1123356689999999988766
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +.||||+||||.|||||+.+|+||+||||+|+|||--+.++-+-|.++.+.. ++||+.++|+.+|++.+.|||
T Consensus 162 p-----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rI 235 (386)
T COG4175 162 P-----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRI 235 (386)
T ss_pred c-----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceE
Confidence 5 4699999999999999999999999999999999999999999999887765 466777999999999999999
Q ss_pred EEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhhHHHhhC
Q 000541 400 ILISDGQIVYQGPREHVLEFFKFMGFECPKRKGVADFLQEVT 441 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~adfl~evt 441 (1433)
.+|.+|+|+..|+++|++. .|.+..+++|..++.
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v~ 269 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNVD 269 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcCC
Confidence 9999999999999999974 466666777777653
No 236
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=336.55 Aligned_cols=206 Identities=20% Similarity=0.314 Sum_probs=171.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCC-C
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHD-N 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 240 (1433)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 999999999875421 245799999985 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 319 (1433)
.+...||+||+.|+....+. .. .+....++.+++.+||+ +..++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKM----------NL------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCC----------CH------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 33446999999987542211 00 00112356688999996 556655
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++... .++||++++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 P-----FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred c-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4 469999999999999999999999999999999999999999999998643 4677888999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998865
No 237
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-34 Score=327.26 Aligned_cols=206 Identities=27% Similarity=0.404 Sum_probs=172.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc--cceEEEEcCCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 246 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++..++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999987 9999999988754322 246999999988889999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.+.....+. ... +....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGL----------SRA------------------------EARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhcCChh-----
Confidence 99999876533211 000 011234567889999877776665
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .++++++++|+.+++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRD-QGLSVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecChhhHh-hCCEEEEEeCCe
Confidence 59999999999999999999999999999999999999999999998643 3566777889988886 499999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
+++.|+++++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887754
No 238
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-35 Score=317.76 Aligned_cols=190 Identities=58% Similarity=0.953 Sum_probs=162.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++.+ ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47889999887421 012469999999999999999999999999999999999753235689999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
. ..+++.++|++|++.+++.+||+||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 344567999999998899999999998643110 49999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++.++.+.+|++++|.++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998644677899999998658999875
No 239
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-35 Score=332.22 Aligned_cols=217 Identities=26% Similarity=0.373 Sum_probs=179.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888888763 2469999999999999999999999999999999999876 46899999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
. ...++.++|++|+..+++.+|+.|++.+....... .........+.++++++.+++.+..++. ...||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23345689999998888889999999875311000 0111123345678899999998766665 3579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999999877999999999975 57788999999985 8999988
Q ss_pred CCC
Q 000541 1072 SLG 1074 (1433)
Q Consensus 1072 ~~~ 1074 (1433)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 864
No 240
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.3e-35 Score=331.10 Aligned_cols=213 Identities=26% Similarity=0.358 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 46999999999999999999999999999999999999887 999999998875432 235699999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++...... ...... +.. ..+....++.+++.+||++..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~~-----~~~~~~------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP-----TWRSLL------GRF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhccccccc-----chhhhh------ccc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 999999999875321000 000000 000 0001123566889999987666554
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.++||++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 469999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred cCCeEEEecChhHH
Q 000541 403 SDGQIVYQGPREHV 416 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~ 416 (1433)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998775
No 241
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.7e-35 Score=325.34 Aligned_cols=198 Identities=30% Similarity=0.457 Sum_probs=167.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 247 (1433)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 999999998875421 23579999999988899999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.+..+..+.. . .+....++.+++.+||++..+..++ .
T Consensus 96 ~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------G------------------------DELTARLEELADRLGMEELLDRRVG-----G 136 (218)
T ss_pred HHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHHHHhhhhh-----h
Confidence 99998864332110 0 0011235668899999877776654 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.++|+++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA--LGKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999854 356777799999999999999999999999
Q ss_pred EEec
Q 000541 408 VYQG 411 (1433)
Q Consensus 408 v~~G 411 (1433)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 242
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-35 Score=334.73 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=176.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 56788888763 2359999999999999999999999999999999999887 56899999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 Q-----ETFARISGYCEQNDIH-SPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~-----~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
. ...++.++|++|++.. ....|+.|++.+....+ .....+..+.++++++.+++.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1234679999998753 44568999998764332 122333445678899999998776664 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999975 45677999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9875
No 243
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.53 Aligned_cols=216 Identities=27% Similarity=0.408 Sum_probs=177.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCC-CCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHD-NHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 244 (1433)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999987 9999999998765332 35799999996 36778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+|||.++.+..+.. .. +....++.+++.+||++..++.++
T Consensus 97 ~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------RE------------------------EMVERVDQALRQVGMEDFLNREPH--- 139 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------HH------------------------HHHHHHHHHHHHcCChhhhhCCcc---
Confidence 89999999875432110 00 011235678899999887776665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|++++|+.+++. .+|++++|++
T Consensus 140 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 140 --RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998653 3567777889888886 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 000541 405 GQIVYQGPREHVLE---FFKFMGFECP 428 (1433)
Q Consensus 405 G~iv~~G~~~~~~~---~f~~~G~~~p 428 (1433)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3444455443
No 244
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-34 Score=328.29 Aligned_cols=205 Identities=21% Similarity=0.351 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-----ccceEEEEcCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQHDNHIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 243 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999887 999999998875421 1356999999998889
Q ss_pred CCCHHHHHHHHHHh-cCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 244 EMTVRETLAFSARC-QGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
.+||+||+.++... .+. ... +....++.+++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGA----------SKE------------------------EAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCChHHHhcCh--
Confidence 99999999886421 110 000 01123456888999987666555
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
+.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ . +++|++++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 2 567777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 245
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=333.01 Aligned_cols=217 Identities=28% Similarity=0.394 Sum_probs=179.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 488999998763 2469999999999999999999999999999999999876 4689999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..+++.++|++|+..+++.+|+.||+.+........ .......++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 234567999999988888999999998753211110 0111223456788999999987666653 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999975 56678999999985 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 8875
No 246
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.1e-34 Score=330.58 Aligned_cols=205 Identities=24% Similarity=0.372 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-----------cccceEEEEcC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-----------VPQRTAAYISQ 237 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q 237 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 46999999999999999999999999999999999999887 99999999887532 12356999999
Q ss_pred CCCCCCCCCHHHHHHHHHHh-cCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc
Q 000541 238 HDNHIGEMTVRETLAFSARC-QGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA 316 (1433)
Q Consensus 238 ~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 316 (1433)
++.+++.+||+||+.++... ++. .. .+....++.+++.+||++..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~gl~~~~ 138 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGE----------PK------------------------EEATARARELLAKVGLAGKE 138 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCCcchh
Confidence 98888999999999885421 110 00 00112345678899998776
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
|+.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|++++|+.+++.+++
T Consensus 139 ~~~~~-----~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~ 211 (250)
T PRK11264 139 TSYPR-----RLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVA 211 (250)
T ss_pred hCChh-----hCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhc
Confidence 66554 6999999999999999999999999999999999999999999998864 2 566777899999999999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 000541 397 DDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~~~~~ 417 (1433)
|++++|++|++++.|+.+++.
T Consensus 212 d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 212 DRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred CEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999988764
No 247
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=347.10 Aligned_cols=202 Identities=22% Similarity=0.294 Sum_probs=173.9
Q ss_pred ceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000541 860 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE---T----FARISGYCEQNDIH 932 (1433)
Q Consensus 860 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~---~----~~~~~gyv~Q~d~~ 932 (1433)
...+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... . .++.+||++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999987 5689999999876431 1 13569999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEe
Q 000541 933 SPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1012 (1433)
Q Consensus 933 ~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LD 1012 (1433)
++.+||+||+.|....+. .+.++.++.++++++.++|.+..++.+ ..|||||||||+|||+|+.+|++|+||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765431 233444567889999999988777653 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1013 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1013 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 4899999999975 56778999999985 899998875
No 248
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.60 Aligned_cols=220 Identities=29% Similarity=0.374 Sum_probs=180.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCcc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYP 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~ 913 (1433)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478899988763 246999999999999999999999999999999999987643 236999999986
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-----CCChhHHHHHHHHHHHHcCCcccccccc
Q 000541 914 KKQ--------ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-----EVDSPTRKMFIEEVMELVELNPLRQALV 980 (1433)
Q Consensus 914 ~~~--------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-----~~~~~~~~~~v~~vl~~l~l~~~~~~~v 980 (1433)
+.. ...++.++|++|++.+++.+||+|++.+......+. ....+..+..++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999998899999999998753211110 1112333456788999999987766653
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhccee
Q 000541 981 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELF 1059 (1433)
Q Consensus 981 g~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ 1059 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999864 899999999975 4677899999
Q ss_pred EEecCcEEEEEcCCC
Q 000541 1060 LLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1060 ll~~gG~~~y~G~~~ 1074 (1433)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 8999998863
No 249
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=329.32 Aligned_cols=220 Identities=23% Similarity=0.311 Sum_probs=176.0
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC---CCeeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~---~~~~~G~I~i~ 910 (1433)
..++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 4589999998873 2359999999999999999999999999999999999743 11358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
|+++.. ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ ..
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987642 133567999999988877 5999999887543211 11223345677889998885421111111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.+ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999854 799999999975 46678999999986 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 99998875
No 250
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=333.16 Aligned_cols=219 Identities=22% Similarity=0.310 Sum_probs=181.6
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..+.++|++++++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEE
Confidence 3588999998874 2469999999999999999999999999999999999877 458999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
+.. ...++.++|++|++.+++..|++|++.+...-..+. ....+..++.++++++.+++.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 532 223456899999998888999999998652111110 001123345678899999998766665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|.+ |+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999864 899999999975 57788999999985 8999
Q ss_pred EEcCCC
Q 000541 1069 YVGSLG 1074 (1433)
Q Consensus 1069 y~G~~~ 1074 (1433)
+.|+..
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 999863
No 251
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=330.45 Aligned_cols=217 Identities=19% Similarity=0.272 Sum_probs=178.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 478899998873 236999999999999999999999999999999999987532 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|+..+++.+||+||+.+....+. ..+....++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999989999999999988654321 1122334456788899998842 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
...|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999999864 689999999975 4667899999997
Q ss_pred -----cCcEEEEEcCC
Q 000541 1063 -----RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 -----~gG~~~y~G~~ 1073 (1433)
+.|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 25899999885
No 252
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.5e-34 Score=331.78 Aligned_cols=223 Identities=22% Similarity=0.295 Sum_probs=178.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.++...... ..+++.+|+|+|+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67889988774210000 0113569999999999999999999999999999999999877 56899999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 QE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
.. ..++.++|++|++ .+.+.+||+|++.+..... ........++.++++++.+++. ...+.. ..
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1345799999986 4667899999997654321 1122233445678899999995 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|.+ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999865 899999999975 45668999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 253
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.3e-35 Score=326.88 Aligned_cols=211 Identities=26% Similarity=0.325 Sum_probs=173.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35778887763 2469999999999999999999999999999999999887 56899999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000541 916 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVE-LNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~-l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..++.++|++|+..+++.+|+.|++.+....+. . ...+..+++++.++ +.+..+.. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~---~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---R---RSRKIPDEIYELFPVLKEMLGRR-----GGDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---c---chHHHHHHHHHHHHhHHHHhhCC-----hhhCCH
Confidence 31 124568999999999999999999987654321 1 12234567777776 45444544 457999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998874 899999999974 45667899999985 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 98863
No 254
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.2e-34 Score=323.45 Aligned_cols=213 Identities=26% Similarity=0.360 Sum_probs=175.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47899999877411 011359999999999999999999999999999999999976 4689999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 915 KQET------F-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 915 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
.... . ++.++|++|++.+++.+||.||+.+....+ ....+..++.++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 246999999998889999999998765432 1223344566888999999987666553 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. . .+.+|++++|.+ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~-~~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-L-AARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-H-HHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 3 466999999985 77
Q ss_pred EEE
Q 000541 1067 EIY 1069 (1433)
Q Consensus 1067 ~~y 1069 (1433)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 255
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.1e-34 Score=337.15 Aligned_cols=214 Identities=22% Similarity=0.274 Sum_probs=176.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCC--
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHD-- 239 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 239 (1433)
..+|+|||++|++||+++|+|+||||||||+++|+|.++++...+|+|.++|.++..... .+.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742348999999998865432 13699999997
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+.+.+||.+++.+.....+. .... +....+..+|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~~~------------------------~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MSKA------------------------EAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CCHH------------------------HHHHHHHHHHHHcCCCChHHH-
Confidence 678999999999876543210 0000 111235567889999764322
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +...+.|||||||||+||+||+.+|+++++||||+|||..++.++.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3556789999999999999999999999999999999999999999999998654 3677888999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 256
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.21 Aligned_cols=201 Identities=23% Similarity=0.339 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++....+.. .. +....++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------PA------------------------EINSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCChh
Confidence 99999999999865422110 00 011234568899999877666554
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+. ++++|+.++|+.+++.. +|++++
T Consensus 145 -----~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 145 -----ELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 59999999999999999999999999999999999999999999987643 35677778899888776 589999
Q ss_pred ecCCeEEEecCh
Q 000541 402 ISDGQIVYQGPR 413 (1433)
Q Consensus 402 L~~G~iv~~G~~ 413 (1433)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 257
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=328.15 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=175.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCC---CCCeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~---~~~~~~G~I~i~G 911 (1433)
.++++|+++.+. .+.+|+|+|+++++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 478899988763 246999999999999999999999999999999999962 2212489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+........ ...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 134567999999988776 5999999876543311 11223345678889999986421111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5799999999975 46688999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999985
No 258
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-35 Score=322.65 Aligned_cols=197 Identities=29% Similarity=0.453 Sum_probs=167.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--ccceEEEEcCCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 246 (1433)
+.+|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 46999999999999 99999999999999999999999987 999999998875432 2357999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.+..+..+.. +. +....++.+++.+||++..++.++
T Consensus 89 v~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~----- 129 (211)
T cd03264 89 VREFLDYIAWLKGIP----------SK------------------------EVKARVDEVLELVNLGDRAKKKIG----- 129 (211)
T ss_pred HHHHHHHHHHHhCCC----------HH------------------------HHHHHHHHHHHHCCCHHHHhCchh-----
Confidence 999999865432110 00 011234668889999877776664
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + +++++++|+.+++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999999753 3 677779999999999999999999999
Q ss_pred EEEec
Q 000541 407 IVYQG 411 (1433)
Q Consensus 407 iv~~G 411 (1433)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 259
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.4e-34 Score=324.35 Aligned_cols=204 Identities=25% Similarity=0.317 Sum_probs=169.2
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC--cccceEEEEc-CCCCC
Q 000541 165 RKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF--VPQRTAAYIS-QHDNH 241 (1433)
Q Consensus 165 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~ 241 (1433)
+++++++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+
T Consensus 30 ~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 106 (236)
T cd03267 30 KYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQL 106 (236)
T ss_pred ccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCcccc
Confidence 345567999999999999999999999999999999999999987 99999999875332 1235799997 55667
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+|++.+.....+.. .. +....++.+++.+||++..|+.++
T Consensus 107 ~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~ 152 (236)
T cd03267 107 WWDLPVIDSFYLLAAIYDLP----------PA------------------------RFKKRLDELSELLDLEELLDTPVR 152 (236)
T ss_pred CCCCcHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhHhcCChh
Confidence 78999999998865432210 00 011234567888999988887765
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. ++++|+.++|+.+++.+++|++++
T Consensus 153 -----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~ 226 (236)
T cd03267 153 -----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLV 226 (236)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEE
Confidence 59999999999999999999999999999999999999999999998653 356677789999999999999999
Q ss_pred ecCCeEEEec
Q 000541 402 ISDGQIVYQG 411 (1433)
Q Consensus 402 L~~G~iv~~G 411 (1433)
|++|++++.|
T Consensus 227 l~~G~i~~~g 236 (236)
T cd03267 227 IDKGRLLYDG 236 (236)
T ss_pred EeCCEEEecC
Confidence 9999998765
No 260
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.9e-34 Score=338.79 Aligned_cols=209 Identities=23% Similarity=0.283 Sum_probs=175.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCC--
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHD-- 239 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 239 (1433)
...+|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++..... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 356999999999999999999999999999999999999987 9999999998865432 35799999997
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADT 318 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 318 (1433)
.+++.+||+||+.+..+....+ +.+. +....++.+++.+||+ +..++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~------------------------~~~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQ------------------------EVKDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHH------------------------HHHHHHHHHHHHcCCChHHhcC
Confidence 5788999999999875432100 0000 1122355688999995 34454
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
. ...|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+
T Consensus 158 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dr 231 (331)
T PRK15079 158 Y-----PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDR 231 (331)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCE
Confidence 4 4569999999999999999999999999999999999999999999998653 356788899999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000541 399 IILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~ 417 (1433)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999998875
No 261
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.6e-34 Score=320.98 Aligned_cols=209 Identities=24% Similarity=0.307 Sum_probs=173.7
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ .+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~---------------~~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 64 (213)
T TIGR01277 2 ALDKVRYEYE---------------HLPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTG 64 (213)
T ss_pred eEEeeeEEeC---------------CcceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEccc
Confidence 5678877653 14579999999999999999999999999999999887 458999999987643
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 -ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 -~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
...++.++|++|++.+++.+|+.||+.+....+. . .....++.++++++.+++.+..++.+ ..||||||||
T Consensus 65 ~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (213)
T TIGR01277 65 LAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQR 136 (213)
T ss_pred CChhccceEEEeccCccCCCCcHHHHHHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHH
Confidence 2345679999999999999999999986532211 1 11223456788999999987766653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGS 1072 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~ 1072 (1433)
++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |+++..|.
T Consensus 137 l~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 137 VALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 99999999999999999999999999999999999998765 899999999974 45678999999985 89988774
No 262
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-34 Score=369.26 Aligned_cols=207 Identities=26% Similarity=0.400 Sum_probs=166.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+++|+|+|++++||+.++|+||||||||||+++|+|.+ |+ +|+|.+||+++.+... ++.++||+|++.+| +.
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF-~~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLP-HG 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCC-Cc
Confidence 46899999999999999999999999999999999999 76 9999999999887654 46899999998665 56
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++.. +.+.+.+.++....+ .+..+ -.|++..||.||+++.
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQAA 484 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHH--HhcccccccccccCCC
Confidence 99999998621 011111111111100 01111 2378889999998765
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.||||||||++|||||+.+|+|++||||||+||+.+...|.+.|+++. +++|+|.++|.. +..+.||+|++|++|
T Consensus 485 -~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~---~~~TvIiItHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 485 -GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS---RRQTTLMVTHQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh---CCCEEEEEecCh-HHHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999998863 245555577776 455779999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++.+|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 263
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=332.86 Aligned_cols=214 Identities=27% Similarity=0.361 Sum_probs=178.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56889888763 12359999999999999999999999999999999999877 45899999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 Q-----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
. ...++.++|++|++. .+...||.|++.+..... .....+..+.+.++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 334579999998754221 1233444556788999999988777653 4799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999964 46678999999986 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9885
No 264
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=324.14 Aligned_cols=212 Identities=27% Similarity=0.403 Sum_probs=179.2
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
.++|+++.++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5778887763 2469999999999999999999999999999999999987 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..++.++|++|+...++.+|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 124678999999988889999999987654331 122333456788999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999865 899999999974 46778999999985 899988864
No 265
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=334.29 Aligned_cols=218 Identities=24% Similarity=0.329 Sum_probs=176.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67899988774110 001359999999999999999999999999999999999876 46899999998754
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCCC
Q 000541 916 Q-------ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGVS 986 (1433)
Q Consensus 916 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~~ 986 (1433)
. ..+++.++|++|++. .+...||+||+.+..... ..+.++.++.++++++.+++.+ ..+.. ..
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----PF 144 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cc
Confidence 2 224567899999862 233469999998764332 1223334456788999999963 44443 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 145 ~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 222 (280)
T PRK13649 145 ELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GK 222 (280)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999974 46677899999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 223 i~~~g~~ 229 (280)
T PRK13649 223 LVLSGKP 229 (280)
T ss_pred EEEeCCH
Confidence 9998875
No 266
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=329.55 Aligned_cols=218 Identities=21% Similarity=0.276 Sum_probs=177.7
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--C-CeeeeEEE
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGSIM 908 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~ 908 (1433)
.+..++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345689999998873 2359999999999999999999999999999999999864 2 13689999
Q ss_pred EcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----ccccc
Q 000541 909 ISGYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQAL 979 (1433)
Q Consensus 909 i~G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~ 979 (1433)
++|.++.. ..+++.++|++|+..+++ .||+||+.+....+. ..+....++.++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987632 234567999999988777 899999987653221 1223334456788999998743 22322
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhccee
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELF 1059 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ 1059 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 45799999999999999999999999999999999999999999999986 4789999999975 4667899999
Q ss_pred EEecCcEEEEEcCC
Q 000541 1060 LLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1060 ll~~gG~~~y~G~~ 1073 (1433)
+|.+ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 899998875
No 267
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-34 Score=330.21 Aligned_cols=217 Identities=27% Similarity=0.409 Sum_probs=178.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999876 46899999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
. ...++.++|++|+..+++..||+||+.+....... ......+..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 22345689999998778889999999875211000 00111233456788999999987666653 579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|.+ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999985 56688999999985 8999998
Q ss_pred CCC
Q 000541 1072 SLG 1074 (1433)
Q Consensus 1072 ~~~ 1074 (1433)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 853
No 268
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.1e-34 Score=325.80 Aligned_cols=198 Identities=25% Similarity=0.376 Sum_probs=166.4
Q ss_pred eccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000541 864 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLL 943 (1433)
Q Consensus 864 L~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 943 (1433)
|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999987 56899999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000541 944 YSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1023 (1433)
Q Consensus 944 f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1023 (1433)
+......+ .....+.++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2223344456788999999987666653 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1024 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1024 ~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999975 46778999999985 899988764
No 269
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=329.80 Aligned_cols=220 Identities=22% Similarity=0.280 Sum_probs=176.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|++|+|||+++|+|+||||||||+++|+|..++ .+.+|+|+++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 689999998873 24699999999999999999999999999999999998753 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ..+++.++|++|++..++. ||.||+.+....+. ...+.....+.++++++.+++.+....... ....
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHG-LARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcc-cccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2345678999999887775 99999988754331 111223334567889999998542111111 1145
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.+ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999975 45677899999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999875
No 270
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=326.49 Aligned_cols=206 Identities=20% Similarity=0.371 Sum_probs=172.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++..++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 9999999988754332 3569999999988999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.+..+..+. ... .+....++.+++.+||++..+..+
T Consensus 93 ~tv~enl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 135 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LSA------------------------EQREDRANELMEEFHIEHLRDSMG---- 135 (241)
T ss_pred CcHHHHHhhhhhcccc---------cCH------------------------HHHHHHHHHHHHHcCCHHHhhcch----
Confidence 9999999876432100 000 001123456888999987665554
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ .+.+++.++|+..++.+++|++++|++
T Consensus 136 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 136 -QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD--SGLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998754 356677788999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 271
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=331.15 Aligned_cols=215 Identities=24% Similarity=0.313 Sum_probs=179.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5889999987631 12459999999999999999999999999999999999977 4689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..+++.++|++|++. .++.+||+||+.+..... ..+.++.+..++++++.+++.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 567889999998764321 1223334456788999999987776653 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|.+ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999876 5999999999863 3 57999999985 89998
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 272
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.8e-35 Score=290.62 Aligned_cols=212 Identities=27% Similarity=0.385 Sum_probs=176.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++.++++..+.. ..+...||++|++.|++||.+||+|||||||||||-+|+|... +.+|+|.+.|++.
T Consensus 6 ii~~~~l~ktvg~---------~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L 74 (228)
T COG4181 6 IIEVHHLSKTVGQ---------GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPL 74 (228)
T ss_pred eeehhhhhhhhcC---------CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcch
Confidence 3566666665532 2345789999999999999999999999999999999999987 5699999999986
Q ss_pred Ccc------cc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 915 KQE------TF-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 915 ~~~------~~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
... .+ .+.+|+|+|...+.|++|..||+...+.++... .........+.++.+||.+-.+.. ...
T Consensus 75 ~~ldEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~Hy-----P~q 146 (228)
T COG4181 75 HKLDEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHY-----PAQ 146 (228)
T ss_pred hhcCHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccC-----ccc
Confidence 431 22 367999999999999999999999887776421 222334567889999998755544 247
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
|||||+|||+||||++..|+|||-||||-+||..+...|.+++-.+.++ |.|.|+++|||. +...|||.+-|.. |+
T Consensus 147 LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~ 223 (228)
T COG4181 147 LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GR 223 (228)
T ss_pred cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ce
Confidence 9999999999999999999999999999999999999999999988754 999999999985 6788999999985 78
Q ss_pred EE
Q 000541 1067 EI 1068 (1433)
Q Consensus 1067 ~~ 1068 (1433)
++
T Consensus 224 l~ 225 (228)
T COG4181 224 LV 225 (228)
T ss_pred ec
Confidence 75
No 273
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.6e-34 Score=314.11 Aligned_cols=190 Identities=49% Similarity=0.845 Sum_probs=163.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCC--CCCeeeeEEEEcCc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYISGSIMISGY 912 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~--~~~~~~G~I~i~G~ 912 (1433)
.++++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|+
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 478999998874210 001246999999999999999999999999999999999987 6 56899999999
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000541 913 PKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQ 992 (1433)
Q Consensus 913 ~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGq 992 (1433)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999998889999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 993 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 993 rkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|.+ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999877999999999986567788999999985 8888764
No 274
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4.5e-33 Score=359.28 Aligned_cols=123 Identities=24% Similarity=0.322 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CeEE
Q 000541 935 NVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGVSGLSTEQRKRLTIAVELVANP---SIIF 1010 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p---~il~ 1010 (1433)
.+||.|++.|.+.++ . .....+.++.++|... .+.. ...||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~------~---i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP------K---IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch------h---hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999998865432 1 1123568888999753 3443 3579999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe-----cCcEEEEEcCC
Q 000541 1011 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK-----RGGQEIYVGSL 1073 (1433)
Q Consensus 1011 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~-----~gG~~~y~G~~ 1073 (1433)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999874 457899999994 57999999985
No 275
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=332.36 Aligned_cols=207 Identities=26% Similarity=0.363 Sum_probs=172.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCC--C---cccceEEEEcCCCC-CC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDE--F---VPQRTAAYISQHDN-HI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 242 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 45999999999999999999999999999999999999987 9999999998741 1 12357999999863 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
...||+||+.++....+. ... +....++.+++.+||.+..++.++
T Consensus 96 ~~~tv~e~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~- 140 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKL----------PED------------------------EVRKRVDNALKRTGIEHLKDKPTH- 140 (283)
T ss_pred ccccHHHHHHhHHHHcCC----------CHH------------------------HHHHHHHHHHHHCCChhhhhCCcc-
Confidence 568999999986542211 000 011235678899999877766554
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.++||++++|
T Consensus 141 ----~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 141 ----CLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred ----cCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 3567777899999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000541 403 SDGQIVYQGPREHVLE 418 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~~ 418 (1433)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 276
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=326.17 Aligned_cols=219 Identities=21% Similarity=0.275 Sum_probs=175.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC-CeeeeEEEEcCccC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYISGSIMISGYPK 914 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~-~~~~G~I~i~G~~~ 914 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788888773 24699999999999999999999999999999999998642 24689999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
.. ..+++.++|++|++.+++ .||+||+.+....+. ........++.++++++.+++.+....... .....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHG-MIKNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcC-cccChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999988876 699999988654331 100112334457789999998532111111 124579999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.+ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999975 46678999999985 8999998
Q ss_pred CC
Q 000541 1072 SL 1073 (1433)
Q Consensus 1072 ~~ 1073 (1433)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 277
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=8e-33 Score=368.90 Aligned_cols=134 Identities=25% Similarity=0.314 Sum_probs=107.1
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000541 932 HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1007 (1433)
Q Consensus 932 ~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~~~LSgGqrkRl~ia~~L~---~~p~ 1007 (1433)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44568999999876542211112223344455 47888999775 4544 3579999999999999998 6999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe-----cCcEEEEEcCC
Q 000541 1008 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK-----RGGQEIYVGSL 1073 (1433)
Q Consensus 1008 il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~-----~gG~~~y~G~~ 1073 (1433)
+++|||||+|||+.+...+++.|+++++.|.|||+++|++. ....+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999975 448899999995 36899999986
No 278
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=324.67 Aligned_cols=219 Identities=21% Similarity=0.312 Sum_probs=177.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--CC-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478899998773 2359999999999999999999999999999999999864 21 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~ 985 (1433)
.++.. ..+++.++|++|+..+++..|++||+.+....+. .....+.++.++++++.+++... .+.... ..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~ 146 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS--NA 146 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC--Cc
Confidence 87632 2346679999999989999999999987543221 11222334567888999998542 121111 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|.+ |
T Consensus 147 ~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G 223 (252)
T PRK14256 147 MELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-G 223 (252)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999975 689999999975 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 224 ~i~~~~~~ 231 (252)
T PRK14256 224 DLVECGET 231 (252)
T ss_pred EEEEeCCH
Confidence 99999985
No 279
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=328.49 Aligned_cols=205 Identities=26% Similarity=0.377 Sum_probs=170.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 244 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 45899999999999999999999999999999999999987 999999999875432 2457999999963 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++....+. .. .+....++.+++.+||++..++.++
T Consensus 99 ~tv~enl~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 141 (271)
T PRK13632 99 ATVEDDIAFGLENKKV----------PP------------------------KKMKDIIDDLAKKVGMEDYLDKEPQ--- 141 (271)
T ss_pred ccHHHHHHhHHHHcCC----------CH------------------------HHHHHHHHHHHHHcCCHHHhhCCcc---
Confidence 9999999986532110 00 0011235668899999877776654
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+. ++++|++++|+.+++. .+|++++|++
T Consensus 142 --~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 142 --NLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 69999999999999999999999999999999999999999999998653 3466777888887775 7999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 280
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=327.38 Aligned_cols=201 Identities=24% Similarity=0.377 Sum_probs=169.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 46999999999999999999999999999999999999987 99999999887542 34589999998888999999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||+.++.+..+. ... +....++.+++.+||++..++.++ .|
T Consensus 89 e~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-----~L 129 (255)
T PRK11248 89 DNVAFGLQLAGV----------EKM------------------------QRLEIAHQMLKKVGLEGAEKRYIW-----QL 129 (255)
T ss_pred HHHHhHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCChhHhhCChh-----hC
Confidence 999886432211 000 011234668899999876666554 59
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS--DGQ 406 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 406 (1433)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++||.++|+..++.++||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQE-TGKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999997543 35667779999999999999999998 599
Q ss_pred EEEecChh
Q 000541 407 IVYQGPRE 414 (1433)
Q Consensus 407 iv~~G~~~ 414 (1433)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988654
No 281
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=330.23 Aligned_cols=219 Identities=25% Similarity=0.351 Sum_probs=177.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC------eeeeEEEE
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YISGSIMI 909 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~------~~~G~I~i 909 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56788887763 246999999999999999999999999999999999987632 12899999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 910 SGYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 910 ~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
+|.+... ..+++.++|++|++..++.+||+||+.+....+.. ......+..+.++++++.+++.+..++. .
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987642 23455689999998766679999999875321110 0111123345678899999998766554 3
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHh
Q 000541 986 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAF 1055 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~---------~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~f 1055 (1433)
..|||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999999876 899999999975 466789
Q ss_pred cceeEEecCcEEEEEcCCC
Q 000541 1056 DELFLLKRGGQEIYVGSLG 1074 (1433)
Q Consensus 1056 d~~~ll~~gG~~~y~G~~~ 1074 (1433)
|++++|.+ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 8999999863
No 282
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=330.33 Aligned_cols=216 Identities=24% Similarity=0.304 Sum_probs=179.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4889999987741 11358999999999999999999999999999999999977 4689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.++|++|++. +++..|+.+++.+..... ....+...+.++++++.+++.+..+.. ...|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677889999998864322 122333445678899999998776654 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++. .+|++++|.+ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 344 4999999985 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99863
No 283
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=327.94 Aligned_cols=224 Identities=21% Similarity=0.260 Sum_probs=180.2
Q ss_pred cCCceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeE
Q 000541 830 PFKPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGS 906 (1433)
Q Consensus 830 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~ 906 (1433)
|..+..+.++|+++.++ .+.+|+|+|+++++||++||+|+|||||||||++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445689999998773 24699999999999999999999999999999999998753 146899
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccccccc
Q 000541 907 IMISGYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVG 981 (1433)
Q Consensus 907 I~i~G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg 981 (1433)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... + .......++.++++++.+++.+..+....
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~-~-~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA-G-VKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc-C-CCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567999999988777 59999998864321 1 11223344567888999988532212222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEE
Q 000541 982 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLL 1061 (1433)
Q Consensus 982 ~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll 1061 (1433)
. ....||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.+|++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2 246899999999999999999999999999999999999999999999985 4799999999975 567889999999
Q ss_pred ecCcEEEEEcCC
Q 000541 1062 KRGGQEIYVGSL 1073 (1433)
Q Consensus 1062 ~~gG~~~y~G~~ 1073 (1433)
.+ |+++..|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 899999985
No 284
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=342.33 Aligned_cols=195 Identities=24% Similarity=0.391 Sum_probs=170.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------cccceEEEEcCCCCCCCCCC
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 246 (1433)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.|+.+.. ....++.+++.+||++..+..++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~----- 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYPG----- 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCcc-----
Confidence 999999863200 00124568899999887776654
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++.+++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999998653 35677779999999999999999999999
Q ss_pred EEEecChhHHH
Q 000541 407 IVYQGPREHVL 417 (1433)
Q Consensus 407 iv~~G~~~~~~ 417 (1433)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999885
No 285
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.1e-34 Score=323.81 Aligned_cols=212 Identities=27% Similarity=0.390 Sum_probs=178.9
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5678877763 2369999999999999999999999999999999999876 468999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234679999999988899999999987654321 122333456788999999987766653 4799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998776 899999999974 46778999999985 899999885
No 286
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=335.52 Aligned_cols=224 Identities=17% Similarity=0.218 Sum_probs=180.1
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC-C-eeeeEEEEcCc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YISGSIMISGY 912 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~-~-~~~G~I~i~G~ 912 (1433)
.++++|+++.++.+ .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 37889998887421 1124699999999999999999999999999999999998752 1 46899999998
Q ss_pred cCCcc---cc----cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCC
Q 000541 913 PKKQE---TF----ARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLP 983 (1433)
Q Consensus 913 ~~~~~---~~----~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~ 983 (1433)
++... .. ++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+.+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~-- 149 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDV-- 149 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhC--
Confidence 76431 11 23699999997 47889999998866543321 12344556778899999999753222211
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
....|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|||++||+.+ .+.+.+|++++|.
T Consensus 150 ~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~ 228 (326)
T PRK11022 150 YPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY 228 (326)
T ss_pred CchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 2357999999999999999999999999999999999999999999999986 4899999999975 4567899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 229 ~-G~ive~g~~ 238 (326)
T PRK11022 229 A-GQVVETGKA 238 (326)
T ss_pred C-CEEEEECCH
Confidence 5 899999985
No 287
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.2e-34 Score=323.83 Aligned_cols=202 Identities=25% Similarity=0.357 Sum_probs=168.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999987 9999999988754322 3469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhC-CCccccccccCc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILG-LDVCADTMVGDE 323 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~vg~~ 323 (1433)
+||+||+.++.+..+.. . ....+.+++.++ +++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~--- 129 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRG--- 129 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCCh---
Confidence 99999998865422100 0 001234555665 454445444
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
+.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+. ++++++.++|+.+++.+++|+|++|+
T Consensus 130 --~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 130 --GDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 469999999999999999999999999999999999999999999997653 35677778999999999999999999
Q ss_pred CCeEEEecChhHH
Q 000541 404 DGQIVYQGPREHV 416 (1433)
Q Consensus 404 ~G~iv~~G~~~~~ 416 (1433)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 288
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=360.38 Aligned_cols=221 Identities=20% Similarity=0.290 Sum_probs=184.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
-++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|..++++.+|+|.++|.++
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378899998773 2469999999999999999999999999999999999876434689999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQET----FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.... .++.+||++|++.+++.+||+|++.+....+.....+.....+.++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24569999999988999999999988654321111122334456889999999987777654 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. .+.+.+|++++|.+ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999878999999999974 45677899999985 899999
Q ss_pred cCCCc
Q 000541 1071 GSLGR 1075 (1433)
Q Consensus 1071 G~~~~ 1075 (1433)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 98754
No 289
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=325.47 Aligned_cols=203 Identities=25% Similarity=0.415 Sum_probs=167.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++..++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998765432 3569999999988999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHh-CCCccccccccCc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKIL-GLDVCADTMVGDE 323 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 323 (1433)
+||+||+.++..... . .+ ....++.+++.+ ++.+..++.+
T Consensus 95 ~tv~~~l~~~~~~~~---~----~~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 135 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R----DQ-----------------------------FQERIKWVYELFPRLHERRIQRA--- 135 (237)
T ss_pred CcHHHHHHHhhhccC---h----hH-----------------------------HHHHHHHHHHHHHHHHHHHhCch---
Confidence 999999988642110 0 00 001123345555 3555444443
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++||.++|+.+++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 136 --GTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999764 2 5667778999999999999999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 290
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4e-34 Score=336.24 Aligned_cols=224 Identities=19% Similarity=0.285 Sum_probs=181.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-eeeeEEEEcCcc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YISGSIMISGYP 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~ 913 (1433)
.++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 48899998877421 12356999999999999999999999999999999999987642 238999999987
Q ss_pred CCc---cc---cc-ceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCC
Q 000541 914 KKQ---ET---FA-RISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPG 984 (1433)
Q Consensus 914 ~~~---~~---~~-~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~ 984 (1433)
+.. .. ++ +.++|++|++ .+.|.+|+.+++.+...... ..+..+..+++.++++.++|.+..+.... .
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~~--~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMKM--Y 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhcC--C
Confidence 643 11 22 4699999997 67899999999977654332 12344455678889999998754332222 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|||+++||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999865 899999999975 45567999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999985
No 291
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=332.63 Aligned_cols=219 Identities=20% Similarity=0.277 Sum_probs=180.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
-+.++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 378999998874210 0012469999999999999999999999999999999999987 5689999999876
Q ss_pred Cc----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 915 KQ----ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 915 ~~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+.++.++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234567999999974 233569999998875432 2233444567889999999988777664 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|.+ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~-~~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-A-VEADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-H-hcCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 9999999999763 4 45999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
+.|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 99985
No 292
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=330.23 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=171.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc----ccceEEEEcCCCC-CCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 243 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 999999999875422 2467999999963 344
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
..||.|++.|+....+.. .. +....++.+++.+||++..++.++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~-- 143 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------PE------------------------EIRERVDESLKKVGMYEYRRHAPH-- 143 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------HH------------------------HHHHHHHHHHHHCCCHhHhhCCcc--
Confidence 579999999875432210 00 011235678999999887777765
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.. +|++++|+
T Consensus 144 ---~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 144 ---LLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 59999999999999999999999999999999999999999999998653 35667778898888865 99999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|+++++|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 293
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=325.75 Aligned_cols=209 Identities=27% Similarity=0.369 Sum_probs=174.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 377899988763 2359999999999999999999999999999999999876 4689999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.++|++|++.+++ .||+||+.+....+ . .....++++++.+++. +..++. ...|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999987776 69999997653221 1 1134567889999996 455543 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999975 46678999999985 89998
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 294
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.1e-34 Score=320.41 Aligned_cols=195 Identities=26% Similarity=0.395 Sum_probs=164.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999887 999999999875432 235699999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++....+. . .. +....++.+++.+||++..++.++
T Consensus 91 ~~~t~~~~l~~~~~~~~~-~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 135 (214)
T cd03292 91 PDRNVYENVAFALEVTGV-P---------PR------------------------EIRKRVPAALELVGLSHKHRALPA- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCC-C---------HH------------------------HHHHHHHHHHHHcCCHHHhhCChh-
Confidence 999999999987543211 0 00 011234568889999877776654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . ++++++++|+.+++.+++|++++|
T Consensus 136 ----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 136 ----ELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ----hcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999754 2 567777899999999999999999
Q ss_pred cCCeE
Q 000541 403 SDGQI 407 (1433)
Q Consensus 403 ~~G~i 407 (1433)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 295
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.3e-34 Score=320.09 Aligned_cols=194 Identities=29% Similarity=0.419 Sum_probs=163.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 46999999999999999999999999999999999999887 999999999876432 235799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++....+.. . ......++.+++.+||++..++.+.
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 136 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------E------------------------REIQRRVGAALRQVGLEHKADAFPE- 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChh-
Confidence 9999999999875432110 0 0011234668899999876666554
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||++++|
T Consensus 137 ----~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 137 ----QLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ----hCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 5999999999999999999999999999999999999999999999754 3 567777899999999999999999
Q ss_pred cCCe
Q 000541 403 SDGQ 406 (1433)
Q Consensus 403 ~~G~ 406 (1433)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 296
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.3e-35 Score=345.45 Aligned_cols=213 Identities=26% Similarity=0.438 Sum_probs=179.0
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcC
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISG 911 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G 911 (1433)
.+..++.+|+++.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 3456777799998852 2379999999999999999999999999999999999987 4699999999
Q ss_pred ccCC---cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccc------cccccC
Q 000541 912 YPKK---QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLR------QALVGL 982 (1433)
Q Consensus 912 ~~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~------~~~vg~ 982 (1433)
.+.. ...+++.++||+|++.+++ -|++||+.++. | +.+ ++.+.++++..++.+.- |+.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 4568899999999997776 49999998752 1 112 34466777777776654 444554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
+.++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++|||+++|++ .....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl--~~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRL--EDAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcCh--HHHhcCCEEEEec
Confidence 3578999999999999999999999999999999999999999999999986 49999999986 4567899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 899998875
No 297
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=323.47 Aligned_cols=211 Identities=22% Similarity=0.289 Sum_probs=175.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. + ..|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 568899887741 1 238999999999999999999999999999999877 56899999998754
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 916 QE-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 916 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12457899999999999999999998753211 111 1233456888999999987777664 479999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999975 46677899999985 899999885
No 298
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=329.46 Aligned_cols=204 Identities=26% Similarity=0.403 Sum_probs=171.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc----ccceEEEEcCCCC-CCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 243 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 45999999999999999999999999999999999999987 999999999875432 1356999999964 467
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 323 (1433)
..||+||+.|+....+. .+. +....++.+++.+||++..++.++
T Consensus 92 ~~tv~enl~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~-- 135 (274)
T PRK13644 92 GRTVEEDLAFGPENLCL----------PPI------------------------EIRKRVDRALAEIGLEKYRHRSPK-- 135 (274)
T ss_pred cchHHHHHHhhHHHcCC----------CHH------------------------HHHHHHHHHHHHCCCHHHhcCCcc--
Confidence 78999999986543211 000 011235668899999887776664
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS 403 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 403 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|++++|+..++ ..+|+|++|+
T Consensus 136 ---~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~--~g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 136 ---TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE--KGKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred ---cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHH-hhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999999854 356777789998888 5699999999
Q ss_pred CCeEEEecChhHHH
Q 000541 404 DGQIVYQGPREHVL 417 (1433)
Q Consensus 404 ~G~iv~~G~~~~~~ 417 (1433)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999988864
No 299
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-34 Score=335.21 Aligned_cols=225 Identities=23% Similarity=0.269 Sum_probs=182.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478999998875321100 00123569999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000541 915 KQE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGV 985 (1433)
Q Consensus 915 ~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~ 985 (1433)
... .+++.++|++|++ .+.|.+||.+++....... ......+.++.+.++++.++|.+ ..+.. .
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 5789999999997654332 12334455667899999999963 44443 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
..||||||||++||+||+.+|++|++||||+|||..++..|+++|+++.++ |.|||++||+.+ .+.+.+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999765 999999999964 35567899999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 899999985
No 300
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=318.38 Aligned_cols=215 Identities=26% Similarity=0.345 Sum_probs=180.4
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCcceEEEECCccCCCCcc-------cceEEEEcCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD-S-SLRVSGRVTYNGHDMDEFVP-------QRTAAYISQH 238 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 238 (1433)
..++++|||+++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++..+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 33467999999998755442 2479999999
Q ss_pred C--CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccc
Q 000541 239 D--NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCA 316 (1433)
Q Consensus 239 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 316 (1433)
+ .+-|.+||.+.+.-..+...... . ..++...+..+|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~------------------------~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------S------------------------KKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------h------------------------hHHHHHHHHHHHHHcCCCCHH
Confidence 4 67899999999877655321100 0 112233456789999998643
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
. +-+.+...|||||||||.||.||+.+|+++|.|||||+||..++.+|++.|+++.+ ..+++++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 33567788999999999999999999999999999999999999999999999987 45788889999999999999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 000541 397 DDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~~~~~ 417 (1433)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 301
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.5e-34 Score=317.83 Aligned_cols=189 Identities=25% Similarity=0.386 Sum_probs=161.1
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK---Q----ETFARISGYCEQNDIHS 933 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~---~----~~~~~~~gyv~Q~d~~~ 933 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999887 56899999998742 1 12356799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeC
Q 000541 934 PNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1013 (1433)
Q Consensus 934 ~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDE 1013 (1433)
+..|++||+.+....+ ........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 1223344556788999999987766653 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEE
Q 000541 1014 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLL 1061 (1433)
Q Consensus 1014 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll 1061 (1433)
||+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999999877999999999975 45678988765
No 302
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-34 Score=314.47 Aligned_cols=180 Identities=44% Similarity=0.777 Sum_probs=154.9
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcceEEEECCccCCCCc--ccceEEEEcCCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD---SSLRVSGRVTYNGHDMDEFV--PQRTAAYISQHDNH 241 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 241 (1433)
.++.+|+|+|+++++||+++|+|||||||||||++|+|.++ ++ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34579999999999999999999999999999999999998 55 999999999876432 24579999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++++.. .
T Consensus 95 ~~~~tv~~~l~~~~~~~---------------------------------------------------------~----- 112 (202)
T cd03233 95 FPTLTVRETLDFALRCK---------------------------------------------------------G----- 112 (202)
T ss_pred CCCCcHHHHHhhhhhhc---------------------------------------------------------c-----
Confidence 99999999998753210 1
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
++.+..||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+..+.++++++||+.+++.+.+|++++
T Consensus 113 ~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 113 NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 12234699999999999999999999999999999999999999999999986543456677777888899999999999
Q ss_pred ecCCeEEEec
Q 000541 402 ISDGQIVYQG 411 (1433)
Q Consensus 402 L~~G~iv~~G 411 (1433)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 303
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-34 Score=325.48 Aligned_cols=207 Identities=25% Similarity=0.406 Sum_probs=170.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
..+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++..
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 45899999999999999999999999999999999999763 12389999999987542 123579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
++ +||+||+.++.+..+... .. +....++.+++.+||. +..+
T Consensus 94 ~~-~tv~e~l~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 139 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHGIKD---------KK------------------------ELDEIVEESLKKAALWDEVKDRLH 139 (247)
T ss_pred CC-CCHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCCcchhhHhh
Confidence 88 999999998754321100 00 0112345678899997 5555
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+.+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|
T Consensus 140 ~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 211 (247)
T TIGR00972 140 DSA-----LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISD 211 (247)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCC
Confidence 444 46999999999999999999999999999999999999999999999754 3 677779999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
++++|++|+++++|+++++.
T Consensus 212 ~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 212 RTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 304
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=332.17 Aligned_cols=205 Identities=23% Similarity=0.336 Sum_probs=170.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------cccceEEEEcCCCC-
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------VPQRTAAYISQHDN- 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 240 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999997 99999999887532 11346999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 319 (1433)
.+..+||+||+.|+....+. ... +....++.+++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGF----------SED------------------------EAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhHhhCC
Confidence 44468999999986542211 000 0112356688999996 455665
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++.++||+|
T Consensus 143 ~~-----~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PF-----ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred cc-----cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 54 5999999999999999999999999999999999999999999999753 3677778999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 305
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=333.11 Aligned_cols=219 Identities=19% Similarity=0.310 Sum_probs=176.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++... .....+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 588999998874110 001349999999999999999999999999999999999887 4689999999875
Q ss_pred Cc--------ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000541 915 KQ--------ETFARISGYCEQNDIH-SPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPG 984 (1433)
Q Consensus 915 ~~--------~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~ 984 (1433)
.. ..+++.++|++|++.. ....||+||+.|..... ....+...+.++++++.+++. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345679999998632 23469999998864321 122333345678889999984 555554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999975 56778999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 899998875
No 306
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=326.91 Aligned_cols=195 Identities=22% Similarity=0.303 Sum_probs=166.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+
T Consensus 25 ~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~ 99 (257)
T PRK11247 25 RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVI 99 (257)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHH
Confidence 35899999999999999999999999999999999999987 9999999976543 245799999999888889999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||+.++... . ....++.+++.+||++..+..++ .|
T Consensus 100 enl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~-----~L 134 (257)
T PRK11247 100 DNVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANEWPA-----AL 134 (257)
T ss_pred HHHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcCChh-----hC
Confidence 999874210 0 00123457888999876665554 69
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIV 408 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 408 (1433)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|++++|+..++.+++|+|++|++|+++
T Consensus 135 SgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 213 (257)
T PRK11247 135 SGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQ-HGFTVLLVTHDVSEAVAMADRVLLIEEGKIG 213 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987653 3566777999999999999999999999999
Q ss_pred EecChh
Q 000541 409 YQGPRE 414 (1433)
Q Consensus 409 ~~G~~~ 414 (1433)
++|+.+
T Consensus 214 ~~~~~~ 219 (257)
T PRK11247 214 LDLTVD 219 (257)
T ss_pred eecccc
Confidence 988754
No 307
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.4e-35 Score=338.96 Aligned_cols=212 Identities=28% Similarity=0.438 Sum_probs=176.1
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcC
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISG 911 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G 911 (1433)
.+..++|+||++++. +++++|+|+||+|++||.+||+|+|||||||++++|.+... .+|+|+|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999885 23469999999999999999999999999999999998775 489999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-------cccccccc
Q 000541 912 YPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-------PLRQALVG 981 (1433)
Q Consensus 912 ~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-------~~~~~~vg 981 (1433)
+++++ +.+|+.+||||||..++ +-||.+|+.|+. .+.+.+ .|-++.+..++. +-.++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98654 56788999999987766 459999999863 222322 234444444443 33456677
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEE
Q 000541 982 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLL 1061 (1433)
Q Consensus 982 ~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll 1061 (1433)
..| ..|||||||||+|||+++.+|+|+++|||||.||+.|...+++.+++. ..|+|+|++.|+ .+....||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~--l~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHR--LDLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEec--chhHhcCCEEEEE
Confidence 664 469999999999999999999999999999999999999999999994 468999999997 4678999999999
Q ss_pred ecCcEEEEEcCC
Q 000541 1062 KRGGQEIYVGSL 1073 (1433)
Q Consensus 1062 ~~gG~~~y~G~~ 1073 (1433)
++ |++...|+.
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 899999985
No 308
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.7e-34 Score=323.68 Aligned_cols=212 Identities=21% Similarity=0.351 Sum_probs=173.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 46999999999999999999999999999999999999887 9999999988754332 2469999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++...... ....+ ... . ..+....++.+++.+|+++..++.++
T Consensus 92 ~tv~~nl~~~~~~~~~-----~~~~~---------~~~-~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 142 (242)
T TIGR03411 92 LTVFENLELALPRDKS-----VFASL---------FFR-L-----------SAEEKDRIEEVLETIGLADEADRLAG--- 142 (242)
T ss_pred CCHHHHHHHhhhcccc-----ccccc---------ccc-c-----------HHHHHHHHHHHHHHcCCchhhcCChh---
Confidence 9999999986431100 00000 000 0 00112235678899999877776665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ +.+|+.++|+.+++.++||+|++|++
T Consensus 143 --~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~---~~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 143 --LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG---KHSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc---CCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999753 35777789999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987753
No 309
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.4e-34 Score=323.08 Aligned_cols=201 Identities=29% Similarity=0.417 Sum_probs=168.4
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc--ccccceEEEec-cCCCCCCC
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ--ETFARISGYCE-QNDIHSPN 935 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~-Q~d~~~~~ 935 (1433)
+.+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34579999999999999999999999999999999999876 468999999986432 23456789997 55667789
Q ss_pred CCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCC
Q 000541 936 VTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1015 (1433)
Q Consensus 936 lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPT 1015 (1433)
+||+|++.+....+ .....+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998865433 1223334456788999999987777654 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 1016 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 1016 sgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999999765 899999999975 46677899999985 7888754
No 310
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=333.35 Aligned_cols=214 Identities=20% Similarity=0.248 Sum_probs=173.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCccCCCCcc-------cceEEEEcCCC-
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RVSGRVTYNGHDMDEFVP-------QRTAAYISQHD- 239 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 239 (1433)
.++|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987422 138999999998765432 13699999997
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 240 -NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 240 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
.+.|.+||.+++....+.... ..+ .+....++.+|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~~~------------------------~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------GNK------------------------KTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------CCH------------------------HHHHHHHHHHHHHCCCCChHH-
Confidence 478999999998765432100 000 011234567899999975211
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
+-+...+.|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.+. .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 112345579999999999999999999999999999999999999999999998654 356788899999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000541 399 IILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~ 418 (1433)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 311
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.1e-34 Score=339.93 Aligned_cols=203 Identities=21% Similarity=0.308 Sum_probs=174.8
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc----CCc---cc---c-cceEEEec
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP----KKQ---ET---F-ARISGYCE 927 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~----~~~---~~---~-~~~~gyv~ 927 (1433)
+...+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+ +.. .. + ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 44679999999999999999999999999999999999987 568999999962 211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000541 928 QNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPS 1007 (1433)
Q Consensus 928 Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~ 1007 (1433)
|+..++|.+||+||+.|....+ ..+..++++.++++++.++|.+..+... ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2334555667889999999988777654 4799999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1008 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1008 il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
||+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999865 899999999975 56788999999985 899999986
No 312
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=330.78 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=179.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCe-eeeEEEEcCcc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ISGSIMISGYP 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~-~~G~I~i~G~~ 913 (1433)
.++++|+++.++. ..+.+|+|+|+++++||++||+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4789999987731 12359999999999999999999999999999999999876321 13999999988
Q ss_pred CCcc---cccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 914 KKQE---TFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 914 ~~~~---~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.... ..++.+||++|++. .++..||+||+.|....+ ..+.++.++.++++++.+++.+..+.. .+.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 6432 34567999999974 567899999998764322 233444556788899999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + +.+|++++|.+ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 8999999999753 3 67999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99985
No 313
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=326.53 Aligned_cols=206 Identities=33% Similarity=0.503 Sum_probs=172.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 46999999999999999999999999999999999999887 9999999987754322 35689999998887889
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++....+. ... +....++.+++.+||++..++.++
T Consensus 92 tv~e~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 133 (258)
T PRK13548 92 TVEEVVAMGRAPHGL----------SRA------------------------EDDALVAAALAQVDLAHLAGRDYP---- 133 (258)
T ss_pred CHHHHHHhhhcccCC----------CcH------------------------HHHHHHHHHHHHcCCHhHhcCCcc----
Confidence 999999886421110 000 011234568889999876676665
Q ss_pred CCCchhHhhHHHHHHHHh------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 326 RGISGGQKKRVTTGEMMV------GPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~------~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
.|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++.+.. +++|++++|+.+++.+++|+|
T Consensus 134 -~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 134 -QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred -cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 59999999999999999 5999999999999999999999999999986333 567777899999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|++++.|+++++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 314
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=293.91 Aligned_cols=200 Identities=27% Similarity=0.380 Sum_probs=176.6
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYE 940 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 940 (1433)
..+|+|||+.|.+||.+.++||||||||||||+++|..+ +..|+|.+||.++....- .-|.|+|++.++|-+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 359999999999999999999999999999999999988 568999999998764332 2489999999999999999
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCH
Q 000541 941 SLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1020 (1433)
Q Consensus 941 ~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~ 1020 (1433)
|+.|+.++| .+++.++.+.+.+.+..+||.+..++.+ -.||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4667888889999999999999887654 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHHhcceeEEecC-cEEEEEcCC
Q 000541 1021 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIVEAFDELFLLKRG-GQEIYVGSL 1073 (1433)
Q Consensus 1021 ~~~~~i~~~l~~~~-~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g-G~~~y~G~~ 1073 (1433)
-+++.++++|-++. ++|+.++++||+.. +..-+++++++|+.| |+++..=++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 99999999998876 45999999999864 344567999999865 788877665
No 315
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4.5e-34 Score=339.89 Aligned_cols=200 Identities=24% Similarity=0.432 Sum_probs=171.3
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-------cccceEEEEcCCCCCCCCCC
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 246 (1433)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 999999999999999999999999999999999987 99999999887432 12457999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+||+.|+.+... .. +....++.+++.+||++..++.+.
T Consensus 92 v~enl~~~~~~~~------------~~------------------------~~~~~~~~~l~~~gL~~~~~~~~~----- 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------PS------------------------ERRISFERVIELLGIGHLLGRLPG----- 130 (354)
T ss_pred HHHHHHHHhhccC------------hh------------------------HHHHHHHHHHHHcCChhHhcCChh-----
Confidence 9999998753210 00 011234668899999887776654
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 599999999999999999999999999999999999999999999986533 5667779999999999999999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
++..|+++++..
T Consensus 210 i~~~g~~~~~~~ 221 (354)
T TIGR02142 210 VAAAGPIAEVWA 221 (354)
T ss_pred EEEECCHHHHhc
Confidence 999999988753
No 316
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=327.71 Aligned_cols=215 Identities=22% Similarity=0.268 Sum_probs=175.1
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~ 910 (1433)
..+.++|+++.++ .+.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3589999998773 24699999999999999999999999999999999998652 1368999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----ccccccc
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVG 981 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg 981 (1433)
|.++.. ...++.++|++|++.+++ .||+||+.+.+..+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 987531 234567999999988887 499999988764331 11 122345677888887742 22222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEE
Q 000541 982 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLL 1061 (1433)
Q Consensus 982 ~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll 1061 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 457999999999999999999999999999999999999999999999854 799999999975 577889999999
Q ss_pred ec----------CcEEEEEcCC
Q 000541 1062 KR----------GGQEIYVGSL 1073 (1433)
Q Consensus 1062 ~~----------gG~~~y~G~~ 1073 (1433)
.+ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 3678999886
No 317
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=326.16 Aligned_cols=206 Identities=21% Similarity=0.324 Sum_probs=167.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 458999999999999999999999999999999999987410 1389999999886432 123569999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
++ +||+||+.|+.+..+.. .. +....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------KK------------------------DLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 89999999875432110 00 0011245678888874 3334
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +++|++++|+.+++.+++|
T Consensus 150 ~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~---~~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 SPA-----LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK---DYTIVIVTHNMQQAARISD 221 (258)
T ss_pred CCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh---CCEEEEEECCHHHHHHhCC
Confidence 443 46999999999999999999999999999999999999999999998742 4677779999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 318
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-34 Score=321.49 Aligned_cols=211 Identities=27% Similarity=0.378 Sum_probs=177.2
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.+. . ++|+|+|++++|||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~ 65 (235)
T cd03299 2 KVENLSKDWK-------------E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITN 65 (235)
T ss_pred eeEeEEEEeC-------------C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCc
Confidence 4677776652 1 27999999999999999999999999999999999877 568999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 917 E-TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 917 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
. ..++.++|++|++.+++.+|+.||+.+..... .....+..+.++++++.+++.+..++.+ ..||||||||
T Consensus 66 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 137 (235)
T cd03299 66 LPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQR 137 (235)
T ss_pred CChhHcCEEEEeecCccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHH
Confidence 1 22467999999998999999999998764332 1223334456778999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
++||++|+++|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 138 l~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 138 VAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 999999999974 46678999999985 899998875
No 319
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.3e-34 Score=319.13 Aligned_cols=198 Identities=25% Similarity=0.347 Sum_probs=169.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++..++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 56999999999999999999999999999999999999887 999999998765422 35799999999889999999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||+.+.....+. . ...++.+++.+||++..|..++ .|
T Consensus 89 ~~~~~~~~~~~~----------~----------------------------~~~~~~~l~~~~l~~~~~~~~~-----~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL----------P----------------------------DSRIDEVLNIVDLTNTGKKKAK-----QF 125 (223)
T ss_pred HHHHHHHHHcCC----------C----------------------------HHHHHHHHHHcCCcHHHhhhHh-----hC
Confidence 999876532210 0 0123457888999877666554 59
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEE
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIV 408 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 408 (1433)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|+.++|+..++.+.+|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE--QGITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999854 3556777889999999999999999999999
Q ss_pred EecChhH
Q 000541 409 YQGPREH 415 (1433)
Q Consensus 409 ~~G~~~~ 415 (1433)
+.|++.+
T Consensus 204 ~~~~~~~ 210 (223)
T TIGR03740 204 YQGKINK 210 (223)
T ss_pred EecChhh
Confidence 9998653
No 320
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=329.20 Aligned_cols=206 Identities=25% Similarity=0.357 Sum_probs=173.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 244 (1433)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 17 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 93 (277)
T PRK13652 17 KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFS 93 (277)
T ss_pred CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCccccccc
Confidence 35999999999999999999999999999999999999987 9999999988754322 356899999963 3456
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||+||+.++....+. .. .+....++.+++.+||.+..++.++
T Consensus 94 ~tv~~~l~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 136 (277)
T PRK13652 94 PTVEQDIAFGPINLGL----------DE------------------------ETVAHRVSSALHMLGLEELRDRVPH--- 136 (277)
T ss_pred ccHHHHHHhHHHHcCC----------CH------------------------HHHHHHHHHHHHHCCChhHhcCCcc---
Confidence 8999999886543211 00 0111235678999999877776664
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++.+. .+++|+.++|+.+++.+.||+|++|++
T Consensus 137 --~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 137 --HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDK 213 (277)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998653 356777799999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 214 G~i~~~g~~~~~~ 226 (277)
T PRK13652 214 GRIVAYGTVEEIF 226 (277)
T ss_pred CeEEEECCHHHHh
Confidence 9999999998875
No 321
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-34 Score=327.52 Aligned_cols=205 Identities=26% Similarity=0.368 Sum_probs=170.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCC--C---cccceEEEEcCCCC-CC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDE--F---VPQRTAAYISQHDN-HI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 242 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 45999999999999999999999999999999999999987 9999999998742 1 11356999999864 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
...|+.||+.++....+.. .. +....++.+++.+||++..++.++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 135 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------EA------------------------EITRRVDEALTLVDAQHFRHQPIQ- 135 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCHhHhcCCch-
Confidence 5678999998864322110 00 011234568889999877776654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|
T Consensus 136 ----~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 136 ----CLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 5999999999999999999999999999999999999999999999864 3 566777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 322
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.2e-34 Score=327.53 Aligned_cols=223 Identities=19% Similarity=0.268 Sum_probs=178.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++++..+... ...+.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~~----~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTGW----FRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCCc----ccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 7899999887421100 00012469999999999999999999999999999999999987 56899999998764
Q ss_pred cc---cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000541 916 QE---TFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~---~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LS 989 (1433)
.. ..++.++|++|++. +.+.+||.|++.+....+. ........+.++++++.+++. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 21 22356899999874 5678899999988654432 122333445678899999994 445543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEI 1068 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~ 1068 (1433)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 899999999975 56667999999985 8999
Q ss_pred EEcCC
Q 000541 1069 YVGSL 1073 (1433)
Q Consensus 1069 y~G~~ 1073 (1433)
..|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88874
No 323
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.7e-34 Score=324.86 Aligned_cols=206 Identities=23% Similarity=0.354 Sum_probs=172.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc----------------ccceE
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV----------------PQRTA 232 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 232 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 46999999999999999999999999999999999999987 999999998775321 14579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHh-cCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhC
Q 000541 233 AYISQHDNHIGEMTVRETLAFSARC-QGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILG 311 (1433)
Q Consensus 233 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 311 (1433)
+|++|++.+++.+||+||+.++... .+. .. .+....++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGM----------AR------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcC
Confidence 9999999889999999999886321 100 00 001123456788999
Q ss_pred CCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 000541 312 LDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPE 391 (1433)
Q Consensus 312 L~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 391 (1433)
+++..+..+ +.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .++++++++|+.++
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 987666554 469999999999999999999999999999999999999999999998653 35677779999999
Q ss_pred HHhhcCeEEEecCCeEEEecChhHHH
Q 000541 392 TYDLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 392 ~~~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 324
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=325.68 Aligned_cols=221 Identities=23% Similarity=0.314 Sum_probs=174.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 244 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999987 9999999998764322 2348999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++...... .+....... . +..+ ....+....++.+++.+||++..+..++
T Consensus 95 ~tv~enl~~~~~~~~~---~~~~~~~~~--------~-~~~~-------~~~~~~~~~~~~~l~~~gl~~~~~~~~~--- 152 (255)
T PRK11300 95 MTVIENLLVAQHQQLK---TGLFSGLLK--------T-PAFR-------RAESEALDRAATWLERVGLLEHANRQAG--- 152 (255)
T ss_pred CcHHHHHHHhhhcccc---chhhhhhcc--------c-cccc-------cchhHHHHHHHHHHHhCChhhhhhCChh---
Confidence 9999999986431100 000000000 0 0000 0000112235667889999876666654
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++||.++|+.+++.+++|++++|++
T Consensus 153 --~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 153 --NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNE-HNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 59999999999999999999999999999999999999999999998653 356777799999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 325
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5e-34 Score=319.14 Aligned_cols=196 Identities=24% Similarity=0.328 Sum_probs=165.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 46999999999999999999999999999999999999887 999999998875432 135799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.+.....+.. . .+....++.+++.+||++..++.++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 136 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGAS----------G------------------------DDIRRRVSAALDKVGLLDKAKNFPI- 136 (222)
T ss_pred ccccHHHHHHhHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCch-
Confidence 9999999999865432110 0 0011124567888999876665554
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .++++++++|+.+++..++|+|++|
T Consensus 137 ----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 137 ----QLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR--VGVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999754 2567777999999999999999999
Q ss_pred cCCeEE
Q 000541 403 SDGQIV 408 (1433)
Q Consensus 403 ~~G~iv 408 (1433)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999975
No 326
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-34 Score=317.07 Aligned_cols=191 Identities=24% Similarity=0.386 Sum_probs=162.4
Q ss_pred cceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000541 866 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 866 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
|+|+++++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999976 468999999987531 1235679999999988899999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
+||+.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223345678899999998766654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 1019 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999875 899999999974 45678999999985 7888765
No 327
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.9e-34 Score=319.99 Aligned_cols=201 Identities=27% Similarity=0.363 Sum_probs=164.1
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc------ccceEEEEcCCC--CC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV------PQRTAAYISQHD--NH 241 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 241 (1433)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 999999999876533 235799999997 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMV 320 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 320 (1433)
++.+||+||+.+.....+... ..+ ......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~---------~~~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLS---------KKE-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCc---------HHH-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 678999999988654321100 000 0011124577888985 4555554
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
+ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++||.++|+.+++.+++|+++
T Consensus 144 ~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 H-----ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEE-LGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred h-----hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEE
Confidence 4 59999999999999999999999999999999999999999999998653 24667778999999999999999
Q ss_pred EecCCeEEEec
Q 000541 401 LISDGQIVYQG 411 (1433)
Q Consensus 401 lL~~G~iv~~G 411 (1433)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 328
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-34 Score=333.31 Aligned_cols=208 Identities=20% Similarity=0.269 Sum_probs=175.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCC--C
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHD--N 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 240 (1433)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999886 9999999998765431 35799999997 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc-ccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV-CADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~ 319 (1433)
+.+.+||.+++.+..+.... ..+. +....+..+++.+||+. ..++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSAA------------------------ERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCHH------------------------HHHHHHHHHHHHCCCChHHhcCC
Confidence 78999999999876543210 0000 11224567899999963 45554
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 152 p-----~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 P-----HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred C-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4 569999999999999999999999999999999999999999999998653 3567888999999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 329
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-34 Score=324.00 Aligned_cols=219 Identities=19% Similarity=0.265 Sum_probs=173.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--C-eeeeEEEEcCc
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGSIMISGY 912 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G~ 912 (1433)
-+++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35778887663 24699999999999999999999999999999999998642 1 35899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 913 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 913 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
++.. ...++.++|++|++.+++. ||+||+.+....+ .........++.++++++.+++.+........ ....
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLH-GLAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245679999999888775 9999998764332 11112223345677889999986521111111 2457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999975 56678999999986 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 330
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-34 Score=334.36 Aligned_cols=226 Identities=16% Similarity=0.187 Sum_probs=178.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--CeeeeEEEEcCc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYISGSIMISGY 912 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~~~~G~I~i~G~ 912 (1433)
-+.++|+++.++.. .+...+|+|||++|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|+
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37889998877422 1235699999999999999999999999999999999998752 246899999998
Q ss_pred cCCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCC---CChhHHHHHHHHHHHHcCCcccccccc
Q 000541 913 PKKQE---T----FARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLE---VDSPTRKMFIEEVMELVELNPLRQALV 980 (1433)
Q Consensus 913 ~~~~~---~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~---~~~~~~~~~v~~vl~~l~l~~~~~~~v 980 (1433)
++... . .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.++|.+..+...
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76421 1 1246999999975 5788999999976422110000 011234456789999999975432211
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhccee
Q 000541 981 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELF 1059 (1433)
Q Consensus 981 g~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ 1059 (1433)
. ....|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||+++|+++ .+.+.+|+++
T Consensus 154 ~--~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~ 230 (330)
T PRK15093 154 S--FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKIN 230 (330)
T ss_pred C--CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEE
Confidence 1 13579999999999999999999999999999999999999999999999875 999999999964 4567899999
Q ss_pred EEecCcEEEEEcCC
Q 000541 1060 LLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1060 ll~~gG~~~y~G~~ 1073 (1433)
+|.+ |+++..|+.
T Consensus 231 vm~~-G~ive~g~~ 243 (330)
T PRK15093 231 VLYC-GQTVETAPS 243 (330)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 899999985
No 331
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=338.91 Aligned_cols=190 Identities=24% Similarity=0.370 Sum_probs=166.8
Q ss_pred cceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000541 866 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 866 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999987 468999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
+||+.|... ...++.++++++.+++.+..+..+ ..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345788999999988777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1019 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|+.++..+++.|+++.++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999865 899999999974 57788999999985 899999986
No 332
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=323.39 Aligned_cols=219 Identities=26% Similarity=0.322 Sum_probs=174.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--CC-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G 911 (1433)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999998773 2359999999999999999999999999999999999742 21 2489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.+... ..+++.++|++|+..+++ .||+||+.+....+ +. ......++.++++++.+++.+....... ....
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~-~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLK-GI-KDKQVLDEAVEKSLKGASIWDEVKDRLH-DSAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHc-CC-CcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcc
Confidence 87632 134567999999988777 89999998764332 11 1122334557788888887431111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999975 56778999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 9999885
No 333
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.4e-34 Score=317.09 Aligned_cols=194 Identities=29% Similarity=0.449 Sum_probs=161.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 244 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 56999999999999999999999999999999999999887 999999998875432 2357999999964 4678
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
+||+||+.++....+. ... +....++.+++.+||++..++.++
T Consensus 91 ~t~~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 133 (211)
T cd03225 91 PTVEEEVAFGLENLGL----------PEE------------------------EIEERVEEALELVGLEGLRDRSPF--- 133 (211)
T ss_pred CcHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCcHhhhcCCcc---
Confidence 9999999886432110 000 011234567889999876666554
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +++|+.++|+.+++..+||+|++|++
T Consensus 134 --~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~--~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 134 --TLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE--GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred --cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 59999999999999999999999999999999999999999999998652 56777799999999999999999999
Q ss_pred Ce
Q 000541 405 GQ 406 (1433)
Q Consensus 405 G~ 406 (1433)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 334
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=324.64 Aligned_cols=219 Identities=19% Similarity=0.257 Sum_probs=175.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--C-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G 911 (1433)
-+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 488999998763 23599999999999999999999999999999999998652 1 1489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ...++.++|++|++.+++. ||+||+.+....+. .....+..+.++++++.+++.+....... ....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 2345679999999888875 99999987643321 11223334557788888888532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999975 56778999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999885
No 335
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.3e-34 Score=339.25 Aligned_cols=194 Identities=25% Similarity=0.376 Sum_probs=168.5
Q ss_pred cceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000541 866 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ-------ETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 866 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999987 468999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
+||+.|..... ...+.++.++++++.+++.+..++.+ ..|||||||||+||+||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12334456889999999988777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1019 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|+.++..+++.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999875 899999999975 56778999999985 899999885
No 336
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.2e-34 Score=318.21 Aligned_cols=196 Identities=24% Similarity=0.372 Sum_probs=162.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998755332 1469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++...... ... +....++.+++.+||++..+..++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKK----------SVK------------------------EAKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhhCChh
Confidence 8899999999986432110 000 011224568889999876666554
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++++.. +.+|+.++|+..++. .+|+|++
T Consensus 141 -----~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 141 -----ELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL-NTSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred -----hCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHh-hcCEEEE
Confidence 699999999999999999999999999999999999999999999986533 456777888888775 4799999
Q ss_pred ecCCeEE
Q 000541 402 ISDGQIV 408 (1433)
Q Consensus 402 L~~G~iv 408 (1433)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999975
No 337
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=6.2e-34 Score=319.20 Aligned_cols=203 Identities=33% Similarity=0.527 Sum_probs=165.3
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD---SSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 244 (1433)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ ++ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 66 99999999887543345679999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHH-HHHHhCCCccccccccCc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDY-ILKILGLDVCADTMVGDE 323 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-il~~lgL~~~~dt~vg~~ 323 (1433)
+||+||+.|+....+.... ... ......+. .++.+++++..++.+
T Consensus 96 ~tv~enl~~~~~~~~~~~~-------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS-------SDA------------------------IRKKRVEDVLLRDLALTRIGGNLV--- 141 (226)
T ss_pred CcHHHHHHHHHHhhccccc-------chH------------------------HHHHHHHHHHHHhhcchhhhcccc---
Confidence 9999999987543211000 000 00011233 788888876665554
Q ss_pred ccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hhHHhhcCeEEEe
Q 000541 324 MLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPA-PETYDLFDDIILI 402 (1433)
Q Consensus 324 ~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~vilL 402 (1433)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ . +.+++.++|+. .++.+++|++++|
T Consensus 142 --~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~-~~tiii~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 142 --KGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-R-NRIVILTIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred --cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCCCHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 45566577776 6899999999999
Q ss_pred cCCeEEEec
Q 000541 403 SDGQIVYQG 411 (1433)
Q Consensus 403 ~~G~iv~~G 411 (1433)
++|+++++|
T Consensus 218 ~~G~i~~~g 226 (226)
T cd03234 218 SSGEIVYSG 226 (226)
T ss_pred eCCEEEecC
Confidence 999999876
No 338
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=323.04 Aligned_cols=218 Identities=22% Similarity=0.270 Sum_probs=175.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 478899988763 246999999999999999999999999999999999986531 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~ 985 (1433)
.++.. ...++.++|++|++.+++ .|++||+.|....... .......+.++++++.+++.+ +.+.. . ...
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~ 145 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDL-K-KSA 145 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCc
Confidence 87632 123567999999988887 8999999886543211 122333456778899988742 11111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|.+ |
T Consensus 146 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G 222 (251)
T PRK14270 146 LKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-G 222 (251)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999876 689999999975 56778999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 223 ~i~~~~~~ 230 (251)
T PRK14270 223 DLIEFNKT 230 (251)
T ss_pred eEEEeCCH
Confidence 99999885
No 339
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-34 Score=291.37 Aligned_cols=205 Identities=24% Similarity=0.358 Sum_probs=176.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 248 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 248 (1433)
..+|+|+|+.|.+||.+.++||||||||||||+++|..+|. .|+|.+||.+++... ..-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCCC--ccceeEeccCccchhhHHH
Confidence 45899999999999999999999999999999999999998 999999999886532 3458999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCC
Q 000541 249 ETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGI 328 (1433)
Q Consensus 249 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 328 (1433)
||++|+.+++|..... ...++.+.+...||++..+.. +-.|
T Consensus 93 dNvafgL~l~Gi~k~~----------------------------------R~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ----------------------------------RREIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHHH----------------------------------HHHHHHHHHHHhCcccccccc-----eEee
Confidence 9999999998863211 123456688999999876644 4569
Q ss_pred chhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEec--CCe
Q 000541 329 SGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILIS--DGQ 406 (1433)
Q Consensus 329 SGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 406 (1433)
||||||||.|||||..+|+.|+||||+.+||.-|+.++-+.|-++.+..+ +.+..|+|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999999887654 556669999999999999999998 479
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
|+..=|++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998777664333
No 340
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.7e-34 Score=324.65 Aligned_cols=205 Identities=24% Similarity=0.340 Sum_probs=170.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC----------------cccceE
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF----------------VPQRTA 232 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 232 (1433)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999999887 99999999876421 113579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHH-hcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhC
Q 000541 233 AYISQHDNHIGEMTVRETLAFSAR-CQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILG 311 (1433)
Q Consensus 233 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 311 (1433)
+|++|++.+++.+||+||+.++.. ..+. .. .+....+..+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGL----------SK------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCC----------CH------------------------HHHHHHHHHHHHHcC
Confidence 999999988999999999987542 1110 00 001123456889999
Q ss_pred CCccc-cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChh
Q 000541 312 LDVCA-DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAP 390 (1433)
Q Consensus 312 L~~~~-dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~ 390 (1433)
|++.. +.. .+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.+|++++|+..
T Consensus 141 l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE--EGKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHH
Confidence 97653 443 346999999999999999999999999999999999999999999999854 3567777999999
Q ss_pred hHHhhcCeEEEecCCeEEEecChhHHH
Q 000541 391 ETYDLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 391 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 341
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.9e-33 Score=314.11 Aligned_cols=194 Identities=20% Similarity=0.334 Sum_probs=150.3
Q ss_pred CceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcC
Q 000541 832 KPHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISG 911 (1433)
Q Consensus 832 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G 911 (1433)
.|..+-++||+|.++ +.++++++++|-|.--..+||+||||.||||||++|.|... +..|+.+-|-
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKnh 648 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKNH 648 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhccc
Confidence 345688899998874 34679999999999999999999999999999999999887 4467654321
Q ss_pred ccCCcccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 912 YPKKQETFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 912 ~~~~~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
+-.+|+..|+. .+...-|+-|.|.-. ..+|. +.....+-.+||...++++- ++.||
T Consensus 649 --------rL~iG~FdQh~~E~L~~Eetp~EyLqr~--FNlpy--------q~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 649 --------RLRIGWFDQHANEALNGEETPVEYLQRK--FNLPY--------QEARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred --------eeeeechhhhhHHhhccccCHHHHHHHh--cCCCh--------HHHHHHhhhhhhhhccceEe----eeecC
Confidence 23578888763 445667888877421 12221 12334677888888888763 57899
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
||||-||++|.--++.|+||+|||||++||..+...+-+.|+++ ...||+++|+-+. +.+.-|.++++.+.|
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~ 778 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQG 778 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCC
Confidence 99999999999999999999999999999999999999999887 4579999998653 455556777776543
No 342
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.50 Aligned_cols=215 Identities=22% Similarity=0.308 Sum_probs=174.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899988773 235999999999999999999999999999999999975421 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. .+....++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 124567999999988777 8999999886543211 122334456778888888742 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|.
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999985 4799999999964 4677899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 899998874
No 343
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.2e-34 Score=322.47 Aligned_cols=213 Identities=24% Similarity=0.327 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCcceEEEECCccCCCCcc----cceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL--DSSLRVSGRVTYNGHDMDEFVP----QRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 565 9999999988754332 23489999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc-ccccccc
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV-CADTMVG 321 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~vg 321 (1433)
+.+|++|++.+..+........ ... + ..+....++.+++.+||++ ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~~---~~~-------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARGE---EPL-------------D-----------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccccc---ccc-------------c-----------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 9999999998865421100000 000 0 0011123567889999974 4555443
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhh-cCeEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDL-FDDII 400 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~D~vi 400 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE--PDRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH--CCcEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999854 356777789999999888 89999
Q ss_pred EecCCeEEEecChhHHH
Q 000541 401 LISDGQIVYQGPREHVL 417 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~ 417 (1433)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 344
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-34 Score=326.52 Aligned_cols=205 Identities=28% Similarity=0.389 Sum_probs=171.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC--c---ccceEEEEcCCCC-CC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF--V---PQRTAAYISQHDN-HI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~ 242 (1433)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++... . .++.++|++|++. .+
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQL 91 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhh
Confidence 35999999999999999999999999999999999999987 99999999887421 1 2357999999863 44
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
..+||+||+.++....+. .+. +....+..+++.+||++..++.++
T Consensus 92 ~~~tv~e~i~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~~- 136 (275)
T PRK13639 92 FAPTVEEDVAFGPLNLGL----------SKE------------------------EVEKRVKEALKAVGMEGFENKPPH- 136 (275)
T ss_pred ccccHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHCCCchhhcCChh-
Confidence 567999999886432110 000 011234568899999887777665
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||++++|
T Consensus 137 ----~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l 210 (275)
T PRK13639 137 ----HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVM 210 (275)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEE
Confidence 5999999999999999999999999999999999999999999999864 2 567777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999875
No 345
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=323.05 Aligned_cols=209 Identities=25% Similarity=0.331 Sum_probs=170.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCCc---ccceEEEEcCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEFV---PQRTAAYISQHDNHIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 243 (1433)
..+|+|+|++|++||+++|+||||||||||+++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 46999999999999999999999999999999999998741 123899999999875432 2357999999988899
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc----ccccc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV----CADTM 319 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~ 319 (1433)
.+||+||+.++.+..+... .. .+....++.+++.+||.+ ..++.
T Consensus 96 ~~tv~enl~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK--------SK------------------------KELQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccC--------CH------------------------HHHHHHHHHHHHHcCCCcchhhhhcCC
Confidence 9999999998754221100 00 001123456788889864 23443
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+..++.+++|++
T Consensus 144 -----~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 144 -----AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK---DMTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEE
Confidence 456999999999999999999999999999999999999999999999742 467777999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|+++..|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999988764
No 346
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.45 Aligned_cols=218 Identities=22% Similarity=0.311 Sum_probs=175.0
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcCc
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISGY 912 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 912 (1433)
++++|+++.++ ++.+|+|+|+++++||+++|+|+|||||||||++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 78899988763 235999999999999999999999999999999999986521 26899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 913 PKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 913 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
++.. ...++.++|++|++.+++ .|++||+.+...... .......++.++++++.+++.+..+.... .....
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7542 133567999999988877 899999987653321 11122334557788888888542111111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.+ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999975 46778999999986 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 998875
No 347
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.9e-34 Score=324.98 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=172.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc------cceEEEEcCCC--
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP------QRTAAYISQHD-- 239 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d-- 239 (1433)
++.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 9999999988764321 34699999986
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADT 318 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 318 (1433)
.+.+.+||+||+.+...... .... .+....++.+++.+||+ +..+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~---------~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT---------SLDE------------------------SEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc---------CCCH------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 46678999999987543110 0000 00112345688999996 55565
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+.+.+++|+
T Consensus 147 ~~-----~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 LP-----RQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 54 469999999999999999999999999999999999999999999998653 356777799999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000541 399 IILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~ 417 (1433)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 348
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=7.8e-34 Score=319.14 Aligned_cols=204 Identities=23% Similarity=0.308 Sum_probs=168.5
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCcceEEEECCccCCCCcc-cceEEEEcCCCC--CCC
Q 000541 171 ILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS----SLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDN--HIG 243 (1433)
Q Consensus 171 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 243 (1433)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 9999999988764422 257999999974 557
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc---cccccc
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV---CADTMV 320 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~v 320 (1433)
.+|++|++.+.....+.. . .+....++.+++.+||++ ..+..+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999998764321110 0 001123566889999973 334444
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
..|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++.+. .+++|+.++|+.+++..++|+++
T Consensus 124 -----~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 124 -----FQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQL-FGTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 469999999999999999999999999999999999999999999998643 35677778999999999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000541 401 LISDGQIVYQGPREHVL 417 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~ 417 (1433)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 349
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.1e-33 Score=316.01 Aligned_cols=173 Identities=25% Similarity=0.312 Sum_probs=136.4
Q ss_pred eccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000541 864 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLL 943 (1433)
Q Consensus 864 L~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 943 (1433)
|.-=.+.+..||+++++||||-||||+.++|+|..+ +.+|. .. .-.++|=||--.-....||++.|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 444457889999999999999999999999999887 44675 11 124688888755557789999885
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHH
Q 000541 944 YSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1023 (1433)
Q Consensus 944 f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~ 1023 (1433)
-...-+.. ..-+..++.+-|.|.++.+..+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 43322111 1224567888899998888764 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 1024 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 1024 ~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
..+-+.||+...+ ++|.+++-||.-+ +--..|++++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998854 7899999998542 223457777664
No 350
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.3e-34 Score=317.60 Aligned_cols=201 Identities=27% Similarity=0.441 Sum_probs=162.5
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCC--CCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHI--GEM 245 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~l 245 (1433)
++++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+
T Consensus 11 ~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~ 85 (213)
T cd03235 11 GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPI 85 (213)
T ss_pred CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCC
Confidence 356999999999999999999999999999999999999987 9999999987642 345799999997653 348
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++...... . .. ... .+....++.+++.+||++..++.++
T Consensus 86 tv~e~l~~~~~~~~~-~-~~---~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 131 (213)
T cd03235 86 SVRDVVLMGLYGHKG-L-FR---RLS-------------------------KADKAKVDEALERVGLSELADRQIG---- 131 (213)
T ss_pred cHHHHHHhccccccc-c-cc---CCC-------------------------HHHHHHHHHHHHHcCCHHHHhCCcc----
Confidence 999999886431100 0 00 000 0011235668899999876666654
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .++++|.++|+.+++.+++|++++|++|
T Consensus 132 -~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tvi~~sH~~~~~~~~~d~i~~l~~~ 208 (213)
T cd03235 132 -ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR--EGMTILVVTHDLGLVLEYFDRVLLLNRT 208 (213)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhcCEEEEEcCc
Confidence 5999999999999999999999999999999999999999999999865 3567777999999999999999999886
Q ss_pred eEEEec
Q 000541 406 QIVYQG 411 (1433)
Q Consensus 406 ~iv~~G 411 (1433)
+++.|
T Consensus 209 -~~~~g 213 (213)
T cd03235 209 -VVASG 213 (213)
T ss_pred -EeecC
Confidence 66654
No 351
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.30 Aligned_cols=219 Identities=22% Similarity=0.247 Sum_probs=174.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 467889988763 246999999999999999999999999999999999987632 3589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 912 YPKKQ----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 912 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
.++.. ...++.++|++|++.+++ .||.||+.+...... .......++.++++++.+++.+........ ....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999988887 899999987643221 011223345567788888875321111111 2457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
|||||||||+||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.+ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999975 56778999999985 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 998875
No 352
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1e-33 Score=322.86 Aligned_cols=214 Identities=22% Similarity=0.288 Sum_probs=174.5
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC--eeeeEEEEcC
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YISGSIMISG 911 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~--~~~G~I~i~G 911 (1433)
..++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3688999998762 24899999999999999999999999999999999987631 1689999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc---ccccccCCCC
Q 000541 912 YPKKQETF-ARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL---RQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~~~~-~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~---~~~~vg~~~~ 985 (1433)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... .. ..++.++++++.+++.+. .+.. .
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KP--ADDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CC--hHHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87653322 356999999974 4566899999876543221 11 123567889999999762 3333 4
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999975 45677899999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 899998875
No 353
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-34 Score=327.02 Aligned_cols=216 Identities=21% Similarity=0.289 Sum_probs=179.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++.. ....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 47899999887410 12359999999999999999999999999999999999987 5689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDI-HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ...++.+||++|++. .++..||.||+.+..... .....+..+.++++++.+++.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 577789999998764322 122333445678999999998776664 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|.+ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999753 3 46999999986 89999
Q ss_pred EcCC
Q 000541 1070 VGSL 1073 (1433)
Q Consensus 1070 ~G~~ 1073 (1433)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 354
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=330.57 Aligned_cols=211 Identities=20% Similarity=0.295 Sum_probs=170.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
..+|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++..
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 12389999999998532 224679999999876
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
+ +.||+|||.|+....+. ...+ .....++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~----------~~~~-----------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGI----------NDRK-----------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCC----------ChHH-----------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 6 58999999987532211 0000 001123456777777655555565
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+ ....|||||||||+||||++.+|+|++|||||+|||+.+...+.+.|+++.+ +.|+++++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~---~~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK---KYSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4457999999999999999999999999999999999999999999998743 46778899999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999985
No 355
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=324.46 Aligned_cols=207 Identities=20% Similarity=0.306 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..
T Consensus 20 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 99 (254)
T PRK14273 20 FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNP 99 (254)
T ss_pred ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccc
Confidence 358999999999999999999999999999999999998621 1389999999876421 124579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
+ .+||+||+.|+....+... . ......++.+++.+|+. +..+
T Consensus 100 ~-~~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 145 (254)
T PRK14273 100 F-LMSIYDNISYGPKIHGTKD---------K------------------------KKLDEIVEQSLKKSALWNEVKDKLN 145 (254)
T ss_pred c-cCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHhCCchhhHHHHh
Confidence 7 4899999998754321100 0 00112244567777763 3345
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+.+ +.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +++++.++|+.+++.+++|
T Consensus 146 ~~~-----~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tvii~sH~~~~~~~~~d 217 (254)
T PRK14273 146 TNA-----LSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE---SYTIIIVTHNMQQAGRISD 217 (254)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhCC
Confidence 444 46999999999999999999999999999999999999999999999842 3677779999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
++++|++|+++..|+++++.
T Consensus 218 ~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 218 RTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988874
No 356
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.55 Aligned_cols=216 Identities=22% Similarity=0.300 Sum_probs=176.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC-e--eeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~--~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478999998773 235999999999999999999999999999999999986532 2 489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|++.+++ .||+||+.+....+.. .+..+.++.++++++.+++.+ ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~---- 146 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKLNK---- 146 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHhcC----
Confidence 87532 234467999999988887 8999999876543311 122333456778888888842 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
....||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 147 -~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 147 -SALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 2457999999999999999999999999999999999999999999999865 699999999975 5778899999997
Q ss_pred c----CcEEEEEcCC
Q 000541 1063 R----GGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~----gG~~~y~G~~ 1073 (1433)
. .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999986
No 357
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-34 Score=322.08 Aligned_cols=204 Identities=27% Similarity=0.346 Sum_probs=169.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCC------C---cccceEEEEcCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDE------F---VPQRTAAYISQHD 239 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d 239 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 45999999999999999999999999999999999999887 9999999987631 1 1135699999999
Q ss_pred CCCCCCCHHHHHHHHH-HhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 240 NHIGEMTVRETLAFSA-RCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
.+++.+||+||+.+.. ...+. ... +....++.+++.+||++..+.
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~gl~~~~~~ 137 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGL----------SKD------------------------QALARAEKLLERLRLKPYADR 137 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCChhhhhC
Confidence 8999999999997532 11110 000 011234668889999876666
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .++++++++|+..++.+++|+
T Consensus 138 ~~~-----~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~--~~~tii~~sh~~~~~~~~~d~ 210 (242)
T PRK11124 138 FPL-----HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE--TGITQVIVTHEVEVARKTASR 210 (242)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHhcCE
Confidence 554 6999999999999999999999999999999999999999999998753 356777789999999999999
Q ss_pred EEEecCCeEEEecChhHH
Q 000541 399 IILISDGQIVYQGPREHV 416 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~ 416 (1433)
+++|++|+++++|+++++
T Consensus 211 i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 211 VVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEECCEEEEeCCHHHh
Confidence 999999999999998764
No 358
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-34 Score=321.18 Aligned_cols=201 Identities=23% Similarity=0.374 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .
T Consensus 16 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (241)
T PRK14250 16 KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-G 91 (241)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-h
Confidence 35899999999999999999999999999999999999987 999999998875432 2357999999987776 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccccccCcc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMVGDEM 324 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~~~ 324 (1433)
||+||+.++....+ . ....++.+++.+||+ +..++.+
T Consensus 92 tv~e~l~~~~~~~~----~----------------------------------~~~~~~~~l~~~~l~~~~~~~~~---- 129 (241)
T PRK14250 92 TVKDNIEYGPMLKG----E----------------------------------KNVDVEYYLSIVGLNKEYATRDV---- 129 (241)
T ss_pred hHHHHHhcchhhcC----c----------------------------------HHHHHHHHHHHcCCCHHHhhCCc----
Confidence 99999987532110 0 001234578889996 3445443
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
..||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.+++|+|++|++
T Consensus 130 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tii~~sH~~~~~~~~~d~i~~l~~ 207 (241)
T PRK14250 130 -KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNK-MNLTVIWITHNMEQAKRIGDYTAFLNK 207 (241)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEeccHHHHHHhCCEEEEEeC
Confidence 469999999999999999999999999999999999999999999987653 256677799999999999999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|+++..|+++++.
T Consensus 208 G~i~~~~~~~~~~ 220 (241)
T PRK14250 208 GILVEYAKTYDFF 220 (241)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 359
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=326.62 Aligned_cols=205 Identities=22% Similarity=0.332 Sum_probs=168.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCCC-
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHDN- 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 240 (1433)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999987 999999998875421 2356999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc-ccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV-CADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~ 319 (1433)
.+...||+||+.|.....+.. .. +....++.+++.+||+. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------QE------------------------EAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCCChhhhhCC
Confidence 344579999999865322110 00 01123456788899973 44554
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
+ +.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.+ . +++|++++|+..++.+++|++
T Consensus 143 ~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 P-----FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999999854 3 567777899999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 360
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=317.27 Aligned_cols=206 Identities=27% Similarity=0.386 Sum_probs=174.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|+++.+... ++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 46999999999999999999999999999999999999987 9999999998765332 4579999999988889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.++....+.. . ......++.+++.+||++..++.+. .
T Consensus 90 ~~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (232)
T cd03300 90 FENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKPS-----Q 130 (232)
T ss_pred HHHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCChh-----h
Confidence 99998865432110 0 0011234668899999877776654 6
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|+.++|+..++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKE-LGITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998653 255666688999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 361
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8e-34 Score=318.83 Aligned_cols=202 Identities=27% Similarity=0.360 Sum_probs=167.4
Q ss_pred eeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCCCCCCCHHHHH
Q 000541 172 LKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 251 (1433)
Q Consensus 172 L~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 251 (1433)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999988765332 248999999889999999999
Q ss_pred HHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchh
Q 000541 252 AFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGG 331 (1433)
Q Consensus 252 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGG 331 (1433)
.++...... .... .+....++.+++.+||++..++.++ .||||
T Consensus 76 ~~~~~~~~~--------~~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLP--------DLSK------------------------SERRAIVEEHIALVGLTEAADKRPG-----QLSGG 118 (230)
T ss_pred HHHHHhccc--------CCCH------------------------HHHHHHHHHHHHHcCCHHHHcCChh-----hCCHH
Confidence 886321000 0000 0011234568899999877776654 59999
Q ss_pred HhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 000541 332 QKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQG 411 (1433)
Q Consensus 332 qrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 411 (1433)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999988653 3566777999999999999999999999999988
Q ss_pred ChhHH
Q 000541 412 PREHV 416 (1433)
Q Consensus 412 ~~~~~ 416 (1433)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 362
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.96 Aligned_cols=216 Identities=22% Similarity=0.274 Sum_probs=174.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCe---eeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~---~~G~I~i~G 911 (1433)
.+.++|+++.++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 477889988763 2469999999999999999999999999999999999875432 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1345679999999999999999999987643221 1112233445666777776542 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|.
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 799999999975 4667789999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 5 899998875
No 363
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-33 Score=315.68 Aligned_cols=211 Identities=23% Similarity=0.323 Sum_probs=175.0
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+... .+.+.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5788888876310 112569999999999999999999999999999999999876 56899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000541 916 QE------TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LS 989 (1433)
.. ..++.++|++|++.+++.+|+.||+.+...... .....+..+.++++++.+++.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999988888999999988654321 1223344556889999999987666653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|.+ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999886 4899999999974 5678999999985 554
No 364
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.7e-34 Score=354.79 Aligned_cols=218 Identities=25% Similarity=0.323 Sum_probs=182.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|++++++ ++.+|+|+|+++.+||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 78899998773 2469999999999999999999999999999999999887 45899999998753
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 QE----TFARISGYCEQNDIHSPNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..++.++|++|++.+++.+||+|++.+....+.. ...+..+.++.++++++.+++.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1235689999999889999999999886432211 11122333456788999999988777654 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++.|.|||+++|++. ++.+.+|++++|.+ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999975 56678899999985 899999
Q ss_pred cCCCc
Q 000541 1071 GSLGR 1075 (1433)
Q Consensus 1071 G~~~~ 1075 (1433)
|+...
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98754
No 365
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=324.27 Aligned_cols=204 Identities=24% Similarity=0.325 Sum_probs=169.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCC-CCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 245 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 245 (1433)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999999987 999999999875432 2357999999974 68888
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|+++|+.|.....+.. .. +....++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------YD------------------------EMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCC----------HH------------------------HHHHHHHHHHHHcCCchhhhCCc-----
Confidence 9999998865432110 00 01123456789999987766655
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 235667778888888875 9999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999998864
No 366
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.35 Aligned_cols=221 Identities=22% Similarity=0.271 Sum_probs=177.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.+. ...+|+|+|+++++||+++|+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 488999998873 135999999999999999999999999999999999987632 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ...++.++|++|+..+++ .|+.||+.+....... .+..+..+.++++++.+++.+..+...+. ...
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988887 8999999876432210 12223345678889999885422111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEecC-
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLKRG- 1064 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g- 1064 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|.+|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999875 4899999999975 577889999999863
Q ss_pred ---cEEEEEcCC
Q 000541 1065 ---GQEIYVGSL 1073 (1433)
Q Consensus 1065 ---G~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999886
No 367
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=330.99 Aligned_cols=221 Identities=19% Similarity=0.238 Sum_probs=177.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~ 910 (1433)
..++++|+++.+.. +.+.+|+|+|++|++||++||+|+|||||||||++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36899999988741 123599999999999999999999999999999999998642 2458999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCC-hhHHHHHHHHHHHHcCCcccccccccCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVD-SPTRKMFIEEVMELVELNPLRQALVGLPG 984 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~-~~~~~~~v~~vl~~l~l~~~~~~~vg~~~ 984 (1433)
|.++.. ...++.++||+|++.+++ .|++||+.|..... ... .+..++.++++++.+++.+-.+..++..
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~- 222 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDKA- 222 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-
Confidence 998742 234667999999988774 79999999864321 112 1222344677888888753222333332
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
...||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|.+
T Consensus 223 ~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~- 299 (329)
T PRK14257 223 GNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ- 299 (329)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 468999999999999999999999999999999999999999999999875 699999999964 35566999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++..|++
T Consensus 300 G~i~e~g~~ 308 (329)
T PRK14257 300 GWIEEAGET 308 (329)
T ss_pred CEEEEeCCH
Confidence 899999986
No 368
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.5e-33 Score=322.38 Aligned_cols=215 Identities=23% Similarity=0.262 Sum_probs=174.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc-
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP- 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~- 913 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 488999998763 2359999999999999999999999999999999999877 468999999986
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-ccccc
Q 000541 914 ----KKQE---T----FARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQAL 979 (1433)
Q Consensus 914 ----~~~~---~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~ 979 (1433)
+... . .++.++|++|+.. +.+.+|+.|++.+..... .. ....+.+..++++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAV-GA-RHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHh-cc-CcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999973 567889999997643211 11 112233456788899999863 44443
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcce
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDEL 1058 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~ 1058 (1433)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999964 455678999
Q ss_pred eEEecCcEEEEEcCC
Q 000541 1059 FLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1059 ~ll~~gG~~~y~G~~ 1073 (1433)
++|.+ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 899999875
No 369
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=323.62 Aligned_cols=219 Identities=21% Similarity=0.260 Sum_probs=176.1
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 911 (1433)
.++++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 589999998873 23599999999999999999999999999999999998652 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.+... ..+++.++|++|+..+++. |++||+.+....+. .......++.++++++.+++.+........ ...
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 167 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NAF 167 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Ccc
Confidence 87642 1345679999999888876 99999987654321 111222345577888888885311111111 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 168 ~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 244 (272)
T PRK14236 168 GLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GK 244 (272)
T ss_pred cCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999976 799999999975 46678999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 245 i~~~g~~ 251 (272)
T PRK14236 245 LVEYGDT 251 (272)
T ss_pred EEecCCH
Confidence 9998875
No 370
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-33 Score=314.19 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=171.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+++|+.+++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 488999988763 2359999999999999999999999999999999999887 4589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 915 KQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
.....++.++|++|++.+++.+|+.|++.+....+. ...++.++++++.+++.+..+..+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG------RRAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC------CcHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999888888999999987654321 112345678899999987766653 579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
|++||++++.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999999888999999999975 5778889998886
No 371
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.45 Aligned_cols=213 Identities=22% Similarity=0.333 Sum_probs=169.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCC--CC---cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMD--EF---VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~--~~---~~~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. .. ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 45999999999999999999999999999999999998762 123899999999875 21 123579999999989
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++....+.... .. +....++.+++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~--------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVKS--------KK------------------------ELDERVEWALKKAALWDEVKDRL- 143 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccCC--------HH------------------------HHHHHHHHHHHHcCCccchhhhh-
Confidence 9999999999987542211000 00 01112455778888743111111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+||+++|+.+++.+++|+|++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~ 220 (253)
T PRK14267 144 NDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAF 220 (253)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEE
Confidence 233457999999999999999999999999999999999999999999999753 3 6777799999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 221 LYLGKLIEVGPTRKVF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 372
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.4e-34 Score=360.19 Aligned_cols=209 Identities=29% Similarity=0.453 Sum_probs=170.8
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 244 (1433)
++++|+|+|+.++|||.++|+||+|||||||+++|.|.++|+ +|+|.+||+++.+... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 356999999999999999999999999999999999999997 9999999999887654 478999999887776
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||+|||.++..- .-.+++.+..+.+ ...|.+. .++++.||.||+++
T Consensus 417 ~TI~~NI~~g~~~-------at~eei~~a~k~a-----------------------~~~d~I~---~lp~g~dt~vge~G 463 (567)
T COG1132 417 GTIRENIALGRPD-------ATDEEIEEALKLA-----------------------NAHEFIA---NLPDGYDTIVGERG 463 (567)
T ss_pred ccHHHHHhcCCCC-------CCHHHHHHHHHHh-----------------------ChHHHHH---hCcccccceecCCC
Confidence 8999999997421 0001111111111 1112222 36888999999665
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
. .||||||||++||||++.+|+|++||||||+||+.+...|.+.++++. .++|+++ +.|..+.+.+ +|+|++|++
T Consensus 464 ~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 464 V-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred c-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 5 699999999999999999999999999999999999999999999764 3456666 7887766655 999999999
Q ss_pred CeEEEecChhHHHH
Q 000541 405 GQIVYQGPREHVLE 418 (1433)
Q Consensus 405 G~iv~~G~~~~~~~ 418 (1433)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 373
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=330.27 Aligned_cols=218 Identities=17% Similarity=0.192 Sum_probs=171.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCccCCCCcc-------cceEEEEcCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RVSGRVTYNGHDMDEFVP-------QRTAAYISQHDN 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 240 (1433)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986421 238999999998765432 136999999965
Q ss_pred --CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 241 --HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 241 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
+.+.+||.+++.+......... .. ..+ ..+....+..+|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~--~~---~~~-----------------------~~~~~~~~~~~L~~~gL~~~~~- 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKG--RW---WQR-----------------------FGWRKRRAIELLHRVGIKDHKD- 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhccc--cc---ccc-----------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 5788999999976432110000 00 000 0011123567899999975321
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
+-+.....|||||||||+||+||+.+|+++++||||+|||+.++.++.+.|+++.+. .+.++++++|+...+.+++|+
T Consensus 151 -~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~tii~itHdl~~v~~~~dr 228 (330)
T PRK15093 151 -AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQN-NNTTILLISHDLQMLSQWADK 228 (330)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHHHHHhCCE
Confidence 113344579999999999999999999999999999999999999999999998653 356788899999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000541 399 IILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~ 417 (1433)
|++|++|+|++.|+.+++.
T Consensus 229 i~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 229 INVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999998874
No 374
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=325.45 Aligned_cols=210 Identities=24% Similarity=0.396 Sum_probs=172.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 46999999999999999999999999999999999999887 9999999988754322 34699999999888899
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++..-.. ....... ......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~-----~~~~~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (265)
T PRK10253 97 TVQELVARGRYPHQ-----PLFTRWR-------------------------KEDEEAVTKAMQATGITHLADQSV----- 141 (265)
T ss_pred cHHHHHHhCccccc-----ccccCCC-------------------------HHHHHHHHHHHHHcCCHHHhcCCc-----
Confidence 99999987521000 0000000 001123466889999987666655
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|++++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999998653 3567777899999999999999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 375
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=355.26 Aligned_cols=219 Identities=26% Similarity=0.322 Sum_probs=182.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378899998773 2469999999999999999999999999999999999886 4689999999876
Q ss_pred Cccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhc--C-CC-CCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 915 KQET----FARISGYCEQNDIHSPNVTVYESLLYSAWLR--L-PL-EVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 915 ~~~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr--~-~~-~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.... .++.++|++|++.+++.+||+|++.+..... . .. ..+..+.++.++++++.+++.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 4311 2346999999998899999999998753211 0 00 0122334456888999999987777654 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|.+ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999974 45677899999985 89
Q ss_pred EEEEcCCCc
Q 000541 1067 EIYVGSLGR 1075 (1433)
Q Consensus 1067 ~~y~G~~~~ 1075 (1433)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999998643
No 376
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=312.27 Aligned_cols=197 Identities=23% Similarity=0.335 Sum_probs=163.9
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999877 46899999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ..+++.++|++|++.+++.+||.|++.+....+. ...++.++++++.+++.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG------PGDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC------ccHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988899999999988654321 02235678899999998776654 357999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhc-ceeE
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFD-ELFL 1060 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd-~~~l 1060 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|+++ ....|+ +++.
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~i~~~~~~~~~ 201 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL--PVASDKVRKLR 201 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh--hhccCCceEEe
Confidence 9999999999999999999999999999999999999999877899999999974 344454 4433
No 377
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=313.82 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=164.2
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 252 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 252 (1433)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999988754432 357999999998899999999998
Q ss_pred HHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhH
Q 000541 253 FSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQ 332 (1433)
Q Consensus 253 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 332 (1433)
++...... ..+ +....++.+++.+||++..++.+. .|||||
T Consensus 93 ~~~~~~~~---------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK---------LTA-------------------------EDRQAIEVALARVGLAGLEKRLPG-----ELSGGE 133 (211)
T ss_pred cccccccC---------ccH-------------------------HHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHH
Confidence 75421100 000 011234668899999877776654 699999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEec
Q 000541 333 KKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQG 411 (1433)
Q Consensus 333 rqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 411 (1433)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++++. .+.+|+.++|+..++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999998643 3566777999999999999999999999998764
No 378
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=321.40 Aligned_cols=219 Identities=23% Similarity=0.282 Sum_probs=177.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 578999999874 246999999999999999999999999999999999987631 3689999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000541 912 YPKKQ----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSG 987 (1433)
Q Consensus 912 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~ 987 (1433)
.++.. ...++.++|++|++.+++ .|++||+.+...... ..+..+....+.++++.+++.+..+.... .....
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234567999999988877 799999987643221 12233334456778888988643221111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEE
Q 000541 988 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQE 1067 (1433)
Q Consensus 988 LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~ 1067 (1433)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|.+ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999974 56778999999985 899
Q ss_pred EEEcCC
Q 000541 1068 IYVGSL 1073 (1433)
Q Consensus 1068 ~y~G~~ 1073 (1433)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 379
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-33 Score=316.48 Aligned_cols=204 Identities=27% Similarity=0.464 Sum_probs=173.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCHHH
Q 000541 171 ILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 249 (1433)
Q Consensus 171 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 249 (1433)
+|+|+|++|+|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 9999999998765332 357999999998899999999
Q ss_pred HHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCc
Q 000541 250 TLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGIS 329 (1433)
Q Consensus 250 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 329 (1433)
|+.++....+.. .. +....++.+++.+||++..++.+. .||
T Consensus 91 ~l~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------KK------------------------EIERKVLEIAEMLGIDHLLNRKPE-----TLS 131 (235)
T ss_pred HHHHHHHHcCCC----------HH------------------------HHHHHHHHHHHHcCChhHHhcCcc-----cCC
Confidence 998864322110 00 011134567888999877776664 599
Q ss_pred hhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000541 330 GGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVY 409 (1433)
Q Consensus 330 GGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 409 (1433)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++... +++++.++|+.+++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986532 5667778899999999999999999999999
Q ss_pred ecChhHHH
Q 000541 410 QGPREHVL 417 (1433)
Q Consensus 410 ~G~~~~~~ 417 (1433)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 380
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=324.94 Aligned_cols=210 Identities=23% Similarity=0.376 Sum_probs=172.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 46999999999999999999999999999999999999887 9999999987654322 35699999998888999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||.||+.++..... +. ... . . ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~~----~~~-----------~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA----LGR-----------F-G-------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-cc----ccC-----------C-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 00 000 0 0 0011234668899999876676665
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++. .+++|+.++|+.+++.+++|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~-~~~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQE-RGLTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 59999999999999999999999999999999999999999999998653 2566777899999999999999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999987753
No 381
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1e-33 Score=318.13 Aligned_cols=201 Identities=24% Similarity=0.313 Sum_probs=165.9
Q ss_pred eeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC--eeeeEEEEcCccCCcccc-cceEEEeccCCC--CCCCCC
Q 000541 863 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YISGSIMISGYPKKQETF-ARISGYCEQNDI--HSPNVT 937 (1433)
Q Consensus 863 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~--~~~G~I~i~G~~~~~~~~-~~~~gyv~Q~d~--~~~~lT 937 (1433)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999987631 168999999987654322 357899999974 557789
Q ss_pred HHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc---cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000541 938 VYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP---LRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1014 (1433)
Q Consensus 938 v~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~---~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEP 1014 (1433)
+.|++.+...... ......++.++++++.+++.+ ..+.. +..|||||||||+||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543221 112233456788999999973 33443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1015 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1015 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|.+ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999864 899999999975 56678999999985 899998875
No 382
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=324.11 Aligned_cols=216 Identities=24% Similarity=0.332 Sum_probs=173.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc--------ccceEEEEcCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV--------PQRTAAYISQHDN 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 240 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 46999999999999999999999999999999999999875223699999998764321 1346899999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
+++.+||+||+.++...... ...+. ... . ..+....++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---------~~~~~--~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---------FWRTC--FSW-F--------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc---------chhhh--ccc-c--------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 89999999999876421000 00000 000 0 0011224567899999987777665
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
+ .|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++. ++++||+++|+.+++.+++|+|+
T Consensus 151 ~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 S-----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred c-----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 5 59999999999999999999999999999999999999999999998653 35777779999999999999999
Q ss_pred EecCCeEEEecChhHH
Q 000541 401 LISDGQIVYQGPREHV 416 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~ 416 (1433)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 383
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=319.65 Aligned_cols=219 Identities=20% Similarity=0.260 Sum_probs=173.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.++++|+++.+. ++.+|+|+|+++.+|++++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 477899988763 235999999999999999999999999999999999987632 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ...++.++|++|++.+++. |++||+.+....+.. . ..+..++.++++++.+++.+....... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT-T-AQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC-C-hhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 999999887543211 1 112233456777888887532111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999975 46677899999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999885
No 384
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-32 Score=357.42 Aligned_cols=211 Identities=26% Similarity=0.390 Sum_probs=175.9
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++||+|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|... +.+|+|++||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 36999999999841 2359999999999999999999999999999999999987 568999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+++.+|||+|++.+++. |++||+.+... | +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~---~-~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK---E-NVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC---C-CCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 4567889999999988765 99999987521 1 222 2335566666665432 35667664
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+...+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999985 4799999999975 5688999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999985
No 385
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.6e-34 Score=311.63 Aligned_cols=195 Identities=28% Similarity=0.355 Sum_probs=165.2
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5678877663 2469999999999999999999999999999999999887 458999999987532
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 917 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 917 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
..+++.++|++|++.+++.+|++|++.+.... . .++.++++++.+++.+..++. ...|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~------~---~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD------H---SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc------c---cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23456799999998888899999999875311 0 234578899999998776655 3579999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEE
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLL 1061 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll 1061 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|+|+++|++. +....+++++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998877999999999975 566777887766
No 386
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-33 Score=357.83 Aligned_cols=214 Identities=30% Similarity=0.440 Sum_probs=178.1
Q ss_pred ceeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCc
Q 000541 833 PHSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGY 912 (1433)
Q Consensus 833 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~ 912 (1433)
...++|+||+|+|+..+ +..+|+|+|+.|++|+.+||+|||||||||++++|.+... |.+|+|.+||.
T Consensus 348 ~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG~ 415 (1228)
T KOG0055|consen 348 KGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDGE 415 (1228)
T ss_pred ccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcCc
Confidence 34699999999997543 3569999999999999999999999999999999999887 66999999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHc-------CCcccccccccC
Q 000541 913 PKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELV-------ELNPLRQALVGL 982 (1433)
Q Consensus 913 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l-------~l~~~~~~~vg~ 982 (1433)
++.. +.++..+|.|.|+|.++ ..|++||+.|+- .+.+.+ .++++.+.. .|.+-.|+.+|.
T Consensus 416 di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~~----~i~~a~k~ana~~fi~~lp~g~~T~vge 485 (1228)
T KOG0055|consen 416 DIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATRE----EIEEAAKAANAHDFILKLPDGYDTLVGE 485 (1228)
T ss_pred cchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccHH----HHHHHHHHccHHHHHHhhHHhhcccccC
Confidence 8754 35677899999999765 579999998852 122222 233333332 344456788887
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
.++ .||||||||++|||||++||+||+||||||+||+.+...|+++|++.. .|+|.|+++|+.| ....+|++++|.
T Consensus 486 ~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I~v~~ 561 (1228)
T KOG0055|consen 486 RGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKIAVME 561 (1228)
T ss_pred CCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEEEEEE
Confidence 765 499999999999999999999999999999999999999999998864 6999999999865 466699999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|..
T Consensus 562 ~-G~IvE~G~h 571 (1228)
T KOG0055|consen 562 E-GKIVEQGTH 571 (1228)
T ss_pred C-CEEEEecCH
Confidence 6 899999986
No 387
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=324.64 Aligned_cols=208 Identities=24% Similarity=0.352 Sum_probs=171.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 244 (1433)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999886222399999999876432 2357999999964 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||+||+.|..+..+. ... +....++.+++.+||++..++.+
T Consensus 100 ~tv~enl~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~L~~~~~~~~---- 141 (282)
T PRK13640 100 ATVGDDVAFGLENRAV----------PRP------------------------EMIKIVRDVLADVGMLDYIDSEP---- 141 (282)
T ss_pred CCHHHHHHhhHHhCCC----------CHH------------------------HHHHHHHHHHHHCCChhHhcCCc----
Confidence 9999999886432211 000 11123566889999987666555
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++ ..||++++|++
T Consensus 142 -~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 142 -ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKK-NNLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999998653 356677788888887 57999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 388
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.93 Aligned_cols=209 Identities=25% Similarity=0.401 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 245 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|+...++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 999999998765432 134699999998888889
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++.... ........ ......++.+++.+||++..++.++
T Consensus 92 tv~~~i~~~~~~~-----~~~~~~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 137 (255)
T PRK11231 92 TVRELVAYGRSPW-----LSLWGRLS-------------------------AEDNARVNQAMEQTRINHLADRRLT---- 137 (255)
T ss_pred cHHHHHHhccchh-----hhhccCCC-------------------------HHHHHHHHHHHHHcCCHHHHcCCcc----
Confidence 9999998853100 00000000 0011234668889999877776654
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+++++.++|+.+++.+++|++++|++|
T Consensus 138 -~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~--~~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 138 -DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT--QGKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 5999999999999999999999999999999999999999999998754 2567777999999999999999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987763
No 389
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.8e-34 Score=315.19 Aligned_cols=195 Identities=23% Similarity=0.391 Sum_probs=163.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCC-----cccceEEEEcCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNHIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 243 (1433)
+.+|+|+|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 46999999999999999999999999999999999999887 99999999877421 12357999999998889
Q ss_pred CCCHHHHHHHHHHh-cCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 244 EMTVRETLAFSARC-QGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
.+||+||+.++... ++. ... +....++.+++.+||++..++.+.
T Consensus 90 ~~t~~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~- 134 (213)
T cd03262 90 HLTVLENITLAPIKVKGM----------SKA------------------------EAEERALELLEKVGLADKADAYPA- 134 (213)
T ss_pred CCcHHHHHHhHHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCCHhHhhhCcc-
Confidence 99999999886421 110 000 011234567888999876666654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|++++|
T Consensus 135 ----~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 135 ----QLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ----ccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 6999999999999999999999999999999999999999999999864 2 566777999999999999999999
Q ss_pred cCCeE
Q 000541 403 SDGQI 407 (1433)
Q Consensus 403 ~~G~i 407 (1433)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 390
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=320.11 Aligned_cols=210 Identities=20% Similarity=0.276 Sum_probs=165.8
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNHI 242 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 242 (1433)
.+|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2112389999999887421 1235799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+ .||+||+.++.+.... .... +....++.+++.+|+........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEK---------LSRA------------------------EMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCC---------CCHH------------------------HHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999886542110 0000 01123456788888743111111 1
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
+....||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++. . +++||.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~-~~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--Q-DYTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCCEEEEE
Confidence 2344699999999999999999999999999999999999999999999974 2 456777899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 391
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=319.87 Aligned_cols=218 Identities=24% Similarity=0.290 Sum_probs=174.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 911 (1433)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478999998763 246999999999999999999999999999999999975421 2489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~ 985 (1433)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. ......++.++++++.+++.+ +.+.. . ...
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~ 147 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRL-H-DSA 147 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHh-h-cCh
Confidence 87642 2335679999999888874 999999987544311 112233456778888888743 11111 1 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|.+ |
T Consensus 148 ~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14261 148 LSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-G 224 (253)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 689999999974 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14261 225 KLIEFDKT 232 (253)
T ss_pred EEEEcCCH
Confidence 99998885
No 392
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.33 Aligned_cols=211 Identities=23% Similarity=0.336 Sum_probs=165.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+.|++|++++|+|||||||||||++|+|..+ +....+|+|.++|+++... ..++.++|++|++..
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 98 (253)
T PRK14242 19 FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNP 98 (253)
T ss_pred eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCC
Confidence 359999999999999999999999999999999999864 1001389999999887531 113579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ .||+||+.++....+.... . .....++.+++.+||.+...+..
T Consensus 99 ~~-~tv~enl~~~~~~~~~~~~---------~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 143 (253)
T PRK14242 99 FP-KSIFENVAYGLRVNGVKDK---------A------------------------YLAERVERSLRHAALWDEVKDRL- 143 (253)
T ss_pred Cc-CcHHHHHHHHHHHcCCCCH---------H------------------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 77 5999999987543221000 0 01122445677788754221111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
++..+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|+.++|+..++.+++|+|++
T Consensus 144 ~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tvii~tH~~~~~~~~~d~v~~ 220 (253)
T PRK14242 144 HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--A-RYTIIIVTHNMQQAARVSDVTAF 220 (253)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCeEEEEEecHHHHHHhCCEEEE
Confidence 23345799999999999999999999999999999999999999999999973 2 35777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+++++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 221 FYMGKLIEVGPTEQIF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 393
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=321.27 Aligned_cols=205 Identities=22% Similarity=0.306 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCC-CCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 244 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 244 (1433)
..+|+|+|+++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999998875422 2357999999964 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
.||.||+.++.+..+. .+. +....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGI----------PRE------------------------EMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCC----------CHH------------------------HHHHHHHHHHHHCCCHhHhhCCc----
Confidence 9999999886532111 000 01123567888899987666655
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEK-YQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999988653 2566777899998886 6999999999
Q ss_pred CeEEEecChhHHH
Q 000541 405 GQIVYQGPREHVL 417 (1433)
Q Consensus 405 G~iv~~G~~~~~~ 417 (1433)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 394
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=327.63 Aligned_cols=205 Identities=20% Similarity=0.311 Sum_probs=167.9
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCC----C----cccceEEEEcCCCC-
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDE----F----VPQRTAAYISQHDN- 240 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 240 (1433)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5899999999999999999999999999999999999887 9999999987642 1 12356999999863
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-cccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTM 319 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 319 (1433)
.+...||+||+.|+....+. ... +....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~----------~~~------------------------~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGE----------NKQ------------------------EAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCC----------CHH------------------------HHHHHHHHHHHHcCCChhHhcCC
Confidence 23356999999986432111 000 0112245678889995 455655
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||++
T Consensus 148 ~~-----~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 PF-----ELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred hh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 44 69999999999999999999999999999999999999999999998653 3567777999999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000541 400 ILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~ 417 (1433)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 395
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.6e-33 Score=316.30 Aligned_cols=206 Identities=27% Similarity=0.421 Sum_probs=173.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCH
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 247 (1433)
+++|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 46999999999999999999999999999999999999887 9999999988764333 3579999999988889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.+..+..+. ... .....++.+++.+|+....++.++ .
T Consensus 90 ~enl~~~~~~~~~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKH----------PKA------------------------KIKARVEELLELVQLEGLGDRYPN-----Q 130 (237)
T ss_pred HHHHHhHHHhcCC----------CHH------------------------HHHHHHHHHHHHcCCHhHhhCChh-----h
Confidence 9999886543211 000 001124567888999766666554 5
Q ss_pred CchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeE
Q 000541 328 ISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQI 407 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 407 (1433)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++.. ..+.+++.++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 2356677788999999999999999999999
Q ss_pred EEecChhHHH
Q 000541 408 VYQGPREHVL 417 (1433)
Q Consensus 408 v~~G~~~~~~ 417 (1433)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 396
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6e-34 Score=363.51 Aligned_cols=210 Identities=25% Similarity=0.392 Sum_probs=174.3
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||++.+. +++.+|+|+|++++|||.+||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986542 1246999999999999999999999999999999999987 4 48999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-------LRQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-------~~~~~vg~~ 983 (1433)
+.+ ..+++.++||+|++.++. -|++||+.++. | +.++ +.++++++..++.+ -.|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~----~-~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN----P-DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC----C-CCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998876 49999998752 1 2222 33555666655543 236777765
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
| ..||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5799999999974 5778999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 899998874
No 397
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=322.78 Aligned_cols=215 Identities=20% Similarity=0.264 Sum_probs=173.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--C-CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 488999998773 2359999999999999999999999999999999999642 1 14689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1245679999999888875 99999987643221 1111223445677888888742 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 4677899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 398
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=313.43 Aligned_cols=224 Identities=21% Similarity=0.320 Sum_probs=182.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC-C-C-eeeeEEEEcCc
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G-G-YISGSIMISGY 912 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~-~-~-~~~G~I~i~G~ 912 (1433)
++.+|++.++... .+...+++||||++++||++||+|.||||||||.++|.|..+ + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 5678887766532 123579999999999999999999999999999999999876 2 2 46789999998
Q ss_pred cCCc---c---cc-cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCC
Q 000541 913 PKKQ---E---TF-ARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLP 983 (1433)
Q Consensus 913 ~~~~---~---~~-~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~ 983 (1433)
++-. + .+ -+.+++++|++ .+.|..||.+.+.-......... .+++..+++.++++.+++.+-...+...|
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP 151 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSYP 151 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhCC
Confidence 6422 2 12 24699999996 57899999988865554332111 34455667888999999987554444444
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
..|||||||||.||.||+.+|++|+.||||++||...+++|+++|+++.+ .|.|+|++|||.. -+.+.+|+|++|.
T Consensus 152 --helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 152 --HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred --cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 47999999999999999999999999999999999999999999999986 5999999999975 4788999999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
. |++|..|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 399
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.6e-33 Score=314.75 Aligned_cols=197 Identities=28% Similarity=0.373 Sum_probs=163.7
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcCCCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQHDNHI 242 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 242 (1433)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999987 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+.+||+||+.++....+. .. .+....++.+++.+||++..+..++
T Consensus 101 ~~~tv~~~l~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~- 145 (228)
T PRK10584 101 PTLNALENVELPALLRGE----------SS------------------------RQSRNGAKALLEQLGLGKRLDHLPA- 145 (228)
T ss_pred CCcCHHHHHHHHHHhcCC----------CH------------------------HHHHHHHHHHHHHcCCHhHhhCChh-
Confidence 999999999886432210 00 0011234668899999877666654
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|+.++|+.+++ +.+|++++|
T Consensus 146 ----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 146 ----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNRE-HGTTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHH-HhCCEEEEE
Confidence 59999999999999999999999999999999999999999999998653 345666688888877 559999999
Q ss_pred cCCeEEEe
Q 000541 403 SDGQIVYQ 410 (1433)
Q Consensus 403 ~~G~iv~~ 410 (1433)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 400
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.9e-33 Score=321.20 Aligned_cols=209 Identities=28% Similarity=0.422 Sum_probs=172.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 46999999999999999999999999999999999999987 9999999988765332 34689999998778889
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++..... ... . .+ ..+....++.+++.+||.+..++.++
T Consensus 91 tv~e~l~~~~~~~~---------~~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 136 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SLW------A-GD--------------SPHDAAVVDRALARTELSHLADRDMS---- 136 (256)
T ss_pred CHHHHHHhcchhhh---------hhc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCcc----
Confidence 99999988531000 000 0 00 00011234568889999876666654
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .+++|+.++|+.+++.+++|+|++|++|
T Consensus 137 -~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 137 -TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA--TGVTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999999753 3567777999999999999999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
+++..|+.+++.
T Consensus 214 ~i~~~g~~~~~~ 225 (256)
T TIGR03873 214 RVVAAGPPREVL 225 (256)
T ss_pred CEEEecCHHHhh
Confidence 999999988763
No 401
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=319.51 Aligned_cols=219 Identities=17% Similarity=0.204 Sum_probs=176.6
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~ 910 (1433)
..+.++++++.+. ++.+|+|+|+.++|||+++|+|+||||||||+++|+|..++. +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3567777776652 356999999999999999999999999999999999987531 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . .....+.++++++.+++.+..+...+. ..
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987632 13456799999998776 5999999988764431 1 122345678889999985432222211 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe---
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK--- 1062 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~--- 1062 (1433)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6799999999999999999999999999999999999999999999985 4799999999975 4667899999996
Q ss_pred ----cCcEEEEEcCC
Q 000541 1063 ----RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ----~gG~~~y~G~~ 1073 (1433)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46999999985
No 402
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=321.06 Aligned_cols=208 Identities=23% Similarity=0.352 Sum_probs=168.0
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++..
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 469999999999999999999999999999999999986410 1389999999886421 123579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc----ccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV----CAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 317 (1433)
++.+||+||+.++....+.. .+. .....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~---------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVR---------NKK------------------------DLDELVEKSLRGANLWNEVKDRLD 143 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCC---------CHH------------------------HHHHHHHHHHHHcCCchhhhhHhh
Confidence 99999999998875432100 000 01123456788888842 233
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+ .+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + ++||.++|+..++.+++|
T Consensus 144 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d 215 (258)
T PRK14241 144 K-----PGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSD 215 (258)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCC
Confidence 3 3456999999999999999999999999999999999999999999999843 3 567779999999999999
Q ss_pred eEEEec------CCeEEEecChhHHH
Q 000541 398 DIILIS------DGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~------~G~iv~~G~~~~~~ 417 (1433)
+|++|+ +|++++.|+++++.
T Consensus 216 ~i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 216 QTAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEEecccCCCCceEEecCCHHHHH
Confidence 999997 79999999988764
No 403
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.30 Aligned_cols=207 Identities=20% Similarity=0.336 Sum_probs=167.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCCc-----ccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEFV-----PQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++..
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 46999999999999999999999999999999999998641 113899999999875321 23569999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc----ccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV----CAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 317 (1433)
++ +||+||+.|+....+.... . +....++.+++.+||.+ ..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------K------------------------ELDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------H------------------------HHHHHHHHHHHHcCCchhhhhHhh
Confidence 77 8999999987543221000 0 01112445777888742 233
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
. ..+.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ + ++|++++|+..++.+++|
T Consensus 143 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 K-----SALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 3 3457999999999999999999999999999999999999999999999753 3 567778899999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998874
No 404
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=323.74 Aligned_cols=218 Identities=23% Similarity=0.392 Sum_probs=174.1
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 488999998773 12469999999999999999999999999999999999977 4689999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHHhcCC-CCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 915 KQETFARISGYCEQNDIHS--PNVTVYESLLYSAWLRLP-LEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 915 ~~~~~~~~~gyv~Q~d~~~--~~lTv~E~l~f~a~lr~~-~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
.....++.++|++|++.+. ...+++|++.+....+.. ........++.++++++.+++.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997542 235789988653211000 01111223445778899999987777654 469999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999974 466778988665 4 8999999
Q ss_pred CCC
Q 000541 1072 SLG 1074 (1433)
Q Consensus 1072 ~~~ 1074 (1433)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 405
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=321.84 Aligned_cols=212 Identities=23% Similarity=0.335 Sum_probs=167.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998741 01389999999887531 123569999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++. ||+||+.|+.+..+... .+. +....++.+++.+||.+......
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~--------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 157 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLAR--------SKA------------------------ELDEIVETSLRKAGLWEEVKDRL- 157 (267)
T ss_pred CCC-cHHHHHHHHHHhccccc--------chH------------------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 774 99999998754322100 000 01123456788889864211111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.+|++++|+.+++.+++|++++
T Consensus 158 ~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~---~~tiiivtH~~~~~~~~~d~v~~ 234 (267)
T PRK14235 158 HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ---NYTIVIVTHSMQQAARVSQRTAF 234 (267)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc---CCeEEEEEcCHHHHHhhCCEEEE
Confidence 223456999999999999999999999999999999999999999999999743 35677789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++.+|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 235 FHLGNLVEVGDTEKMF 250 (267)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 406
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=324.08 Aligned_cols=215 Identities=20% Similarity=0.291 Sum_probs=173.7
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--C-CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+.|++||+++|+|||||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999998773 2359999999999999999999999999999999999743 1 12689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|++.+++. ||.||+.+....+. . .+....++.+.++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~-~-~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG-I-NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC-C-CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999888775 99999988654321 1 112223455677888888742 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+.+|++++|.
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 689999999975 4667899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 899999885
No 407
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=319.65 Aligned_cols=210 Identities=20% Similarity=0.272 Sum_probs=167.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCC---CCCCCcceEEEECCccCCCCc-----ccceEEEEcCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKL---DSSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQHDN 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l---~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 240 (1433)
+++|+|+|+++++|++++|+||||||||||+++|+|.. ++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 46999999999999999999999999999999999973 331 13899999999875421 2356999999987
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
.++ .||+||+.++.+..+.... ......++.+++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 6999999987543211000 001123456788888864322111
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
+...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. . +++|+.++|+..++.+++|+++
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--K-DYTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhCCEEE
Confidence 23345799999999999999999999999999999999999999999999973 2 3667778999999999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000541 401 LISDGQIVYQGPREHVL 417 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~ 417 (1433)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 408
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2e-33 Score=364.24 Aligned_cols=205 Identities=28% Similarity=0.408 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++.+..+ ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 45899999999999999999999999999999999999998 9999999999887654 46899999998666 56
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++.. . + ..++.+..+.+++ +..+ -.+++..||.+|+.+
T Consensus 542 TI~eNi~~~~~---~-~----~e~i~~al~~a~l------------------------~~~i--~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP---L-T----LDEAWEAARMAGL------------------------AEDI--RAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC---C-C----HHHHHHHHHHcCc------------------------HHHH--HhccccccccccCCC-
Confidence 99999998632 0 0 0111111111111 1111 136788899999876
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.+||||||||++|||||+.+|++++||||||+||+.+..++.+.|+++ ++ |+|+++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~-T~IiItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KV-TRIVIAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CC-eEEEEecCh-HHHHcCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999874 34 556577776 445679999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++++|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 409
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=318.49 Aligned_cols=215 Identities=24% Similarity=0.315 Sum_probs=173.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--C-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999998773 24699999999999999999999999999999999998752 1 3589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 143 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDR---- 143 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhcc----
Confidence 87532 124567999999988775 799999987643221 1112223355778888888842 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
....||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|.
T Consensus 144 -~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 144 -NAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 2457999999999999999999999999999999999999999999999854 799999999975 4667799999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 899988875
No 410
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=4.6e-32 Score=349.35 Aligned_cols=123 Identities=24% Similarity=0.307 Sum_probs=100.5
Q ss_pred CCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCeEE
Q 000541 935 NVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1010 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~~~~~LSgGqrkRl~ia~~L~~---~p~il~ 1010 (1433)
.+||.|.+.|.+.+. . .....++++.+||... .+.. ...||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~------~---i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP------S---ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc------c---hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 478888887765432 0 1123567888898653 3333 35799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe-----cCcEEEEEcCC
Q 000541 1011 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK-----RGGQEIYVGSL 1073 (1433)
Q Consensus 1011 LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~-----~gG~~~y~G~~ 1073 (1433)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999874 457799999994 57999999985
No 411
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=318.19 Aligned_cols=211 Identities=21% Similarity=0.302 Sum_probs=168.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 45999999999999999999999999999999999998641 12389999999987532 124569999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ .||+||+.++.+..+... + .+....++.+++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------K------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 699999998754221100 0 001123455788888864322222
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
++..+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. . +++|+.++|+.+++.++||++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--K-NYTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--c-CCEEEEEecCHHHHHHhcCEEEE
Confidence 24456799999999999999999999999999999999999999999999874 2 46777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+++++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998864
No 412
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.3e-33 Score=350.97 Aligned_cols=220 Identities=22% Similarity=0.348 Sum_probs=180.7
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788888763 24699999999999999999999999999999999998764335899999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCChhHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000541 916 QET----FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL-EVDSPTRKMFIEEVMELVELNPLR-QALVGLPGVSGLS 989 (1433)
Q Consensus 916 ~~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~-~~~~~~~~~~v~~vl~~l~l~~~~-~~~vg~~~~~~LS 989 (1433)
... .++.+||++|++.+++.+||.|++.+....+... ....+..++.++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356899999998899999999998764332111 112233445678899999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 990 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 990 gGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+.+|++++|.+ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999974 46677899999986 89999
Q ss_pred EcCCCc
Q 000541 1070 VGSLGR 1075 (1433)
Q Consensus 1070 ~G~~~~ 1075 (1433)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 988754
No 413
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=318.27 Aligned_cols=212 Identities=22% Similarity=0.308 Sum_probs=168.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|.++|+++... ..++.++|++|+...
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 469999999999999999999999999999999999986 3111389999999887432 124579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||+||+.++.+..+... .. +....++.+++.+|+........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------RS------------------------EADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhHHh-
Confidence 999999999987643211000 00 01123456788888854211111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++||+++|+.+++.++||++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123456999999999999999999999999999999999999999999999853 3 5777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 414
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.50 Aligned_cols=207 Identities=22% Similarity=0.280 Sum_probs=170.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCC--CCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 243 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 243 (1433)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC-ccccccccC
Q 000541 244 EMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD-VCADTMVGD 322 (1433)
Q Consensus 244 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 322 (1433)
.+||.|++.+..+.... .... +....++.+++.+||+ +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LEPE------------------------QREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccC---------CCHH------------------------HHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999886542100 0000 0112346689999994 5555544
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.++||++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 3567777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 415
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.8e-33 Score=351.70 Aligned_cols=211 Identities=21% Similarity=0.316 Sum_probs=180.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999998873 2459999999999999999999999999999999999876 4589999999875
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQE---T-FARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
... . .++.+||++|++.+++.+||+|++.+... . ....++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 12458999999999999999999987531 0 1233456788999999987776654 47999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|.+ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999974 46678999999985 899999
Q ss_pred cCCC
Q 000541 1071 GSLG 1074 (1433)
Q Consensus 1071 G~~~ 1074 (1433)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 416
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=325.23 Aligned_cols=235 Identities=28% Similarity=0.431 Sum_probs=188.9
Q ss_pred hcCCCCCceeEEeeceeEEEEEecCCCCCCCchhHHHHHHHhhhhhccccccccccceeeeceEEEEeCCeEEEEEcCCC
Q 000541 113 RVGISLPTIEVRFEHLNVEAEAYVGSRALPTFFNFCANIIEGFLNSVNILPSRKKHLTILKDVSGIIRPGRMTLLLGPPA 192 (1433)
Q Consensus 113 ~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 192 (1433)
++.++-|+-.+..|++++-- ...++++|+|+||.+.+|+.++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~~P--------------------------------Pg~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTAAP--------------------------------PGQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeeecC--------------------------------CCCCCcceecceeEecCCceEEEECCCC
Confidence 45566677788888887621 1234679999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc---ceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhh
Q 000541 193 SGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRHEMLSE 269 (1433)
Q Consensus 193 SGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 269 (1433)
||||||.++|.|..+|. +|.|.++|-+++.+.+. +.+||.||+-.+|+ -||.|||. |..
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~----------- 434 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFG----------- 434 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hcc-----------
Confidence 99999999999999987 99999999999887764 78999999865554 69999995 211
Q ss_pred hhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhHhhHHHHHHHHhCCCcEe
Q 000541 270 LSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQAL 349 (1433)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~il 349 (1433)
++.|.+...+|+... ...|.+ +.|++.+||.||+.+. +||||||||+++||||+++|.++
T Consensus 435 -----------~~~d~~kIieAA~lA-----gvHelI---l~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 435 -----------EEADPEKVIEAARLA-----GVHELI---LRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred -----------ccCCHHHHHHHHHHc-----ChHHHH---HhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCcEE
Confidence 122333344443322 223333 4599999999998765 79999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecChhHHHHHH
Q 000541 350 FMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGPREHVLEFF 420 (1433)
Q Consensus 350 llDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f 420 (1433)
+||||-|.||+.....+.+.+.+... . +.++|+++|. |.+...+|+|++|++|++-.+|+++|++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-r-G~~vvviaHR-Ps~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-R-GGTVVVIAHR-PSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-c-CCEEEEEecC-HHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999998643 3 4444446554 5788899999999999999999999998754
No 417
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-33 Score=315.55 Aligned_cols=202 Identities=25% Similarity=0.424 Sum_probs=170.0
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 252 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 252 (1433)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998754322 357999999998899999999998
Q ss_pred HHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCchhH
Q 000541 253 FSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGISGGQ 332 (1433)
Q Consensus 253 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 332 (1433)
++... ... ..+ .....++.+++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~--------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--------LNA-------------------------AQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccC--------CCH-------------------------HHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 000 000 011235668899999877776665 599999
Q ss_pred hhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEEecC
Q 000541 333 KKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVYQGP 412 (1433)
Q Consensus 333 rqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 412 (1433)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.+.. ++++++++|+..++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999986533 5667778999999999999999999999999999
Q ss_pred hhHHHH
Q 000541 413 REHVLE 418 (1433)
Q Consensus 413 ~~~~~~ 418 (1433)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887653
No 418
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=322.91 Aligned_cols=214 Identities=22% Similarity=0.291 Sum_probs=173.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 911 (1433)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999998773 24699999999999999999999999999999999998652 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc----cccccccC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP----LRQALVGL 982 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~----~~~~~vg~ 982 (1433)
.++.. ...++.++|++|+..+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654331 111 23455788899998853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
...||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+...+|+++++.
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 457999999999999999999999999999999999999999999999976 489999999975 4566789976543
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
++|+++..|+.
T Consensus 254 ~~G~i~~~g~~ 264 (285)
T PRK14254 254 TGGELVEFDDT 264 (285)
T ss_pred eCCEEEEeCCH
Confidence 35899998874
No 419
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.2e-33 Score=320.94 Aligned_cols=224 Identities=24% Similarity=0.318 Sum_probs=178.5
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.+.... ..+ ...++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67889988774100 000 0012569999999999999999999999999999999999876 46999999998754
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 QE------TFARISGYCEQND--IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
.. ..++.++|++|+. .+.+..|+.|++.+..... ...........++++++.+++. ...+.. ..
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2356799999997 3567899999997643211 1122334445688999999996 455544 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|.+ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999975 46668999999985 8
Q ss_pred EEEEEcCCC
Q 000541 1066 QEIYVGSLG 1074 (1433)
Q Consensus 1066 ~~~y~G~~~ 1074 (1433)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 420
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.3e-34 Score=321.09 Aligned_cols=210 Identities=24% Similarity=0.394 Sum_probs=162.1
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehH
Confidence 357788877631 12358999999999999999999999999999999999986 46899999998653
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHH-----HHHHHHHHc--CCcccccccccCCCC
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKM-----FIEEVMELV--ELNPLRQALVGLPGV 985 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~vl~~l--~l~~~~~~~vg~~~~ 985 (1433)
. ..+++.++|++|++.+++ .||.||+.+... ......... ..+++++.+ ++....+. ..
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-----~~ 136 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGE-----QG 136 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhc-----CC
Confidence 2 234567999999987664 699999976421 111111100 112223333 22222222 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||+++|++. .+ +.+|++++|.+ |
T Consensus 137 ~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~-~~~d~v~~l~~-G 212 (237)
T cd03252 137 AGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLS-TV-KNADRIIVMEK-G 212 (237)
T ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHH-HH-HhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999864 899999999975 34 56999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 213 ~i~~~~~~ 220 (237)
T cd03252 213 RIVEQGSH 220 (237)
T ss_pred EEEEEcCH
Confidence 99999875
No 421
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.7e-33 Score=313.19 Aligned_cols=192 Identities=27% Similarity=0.357 Sum_probs=158.7
Q ss_pred cceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000541 859 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQETFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 859 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999876 568999999975421 1112334577999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
+||+.+....+. .+....++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987654321 122334456788899999987777654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEc
Q 000541 1019 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVG 1071 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G 1071 (1433)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|.+ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998877899999999974 45667899999985 8888765
No 422
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=358.77 Aligned_cols=209 Identities=24% Similarity=0.403 Sum_probs=167.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45999999999999999999999999999999999999998 9999999999876653 467999999987665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++.... . + .+++....+.++ .+..++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~~-~-~----~~~i~~al~~~~------------------------l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTEQ-Y-S----REQIEEAARMAY------------------------AMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCCC-C-C----HHHHHHHHHHhC------------------------cHHHHH--hcccccCceeCCCC-
Confidence 9999998852100 0 0 011111111110 011111 27788899999875
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+.||||||||++|||||+.+|++++||||||+||+.+...+.+.|++.. .+.|+|.++|+. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~---~~~tvI~VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ---KNRTSLVIAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh---CCCEEEEEecch-HHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999998863 245555577776 556779999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 423
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-33 Score=316.55 Aligned_cols=218 Identities=24% Similarity=0.329 Sum_probs=172.4
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--CC-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 378999998763 2469999999999999999999999999999999999753 21 2489999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~ 985 (1433)
.++.. ...++.++|++|++.+++ .||+||+.+....+.. ......++.+.+.++.+++.. +.+... ...
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~--~~~ 146 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH--ESA 146 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh--cCc
Confidence 87632 234567999999988887 6999999876543211 111222344566777777642 111111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+.+|++++|.+ |
T Consensus 147 ~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G 223 (252)
T PRK14255 147 LSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-G 223 (252)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999866 589999999975 46678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 224 ~i~~~~~~ 231 (252)
T PRK14255 224 NLIEFADT 231 (252)
T ss_pred EEEEeCCH
Confidence 99998875
No 424
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=319.53 Aligned_cols=211 Identities=18% Similarity=0.312 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 458999999999999999999999999999999999986 3212389999999987431 123569999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++. ||+||+.|+.+..+... +. +....++.+++.+|+.+......
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~l- 149 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKN---------KK------------------------KLQEIVEKSLKDVALWDEVKDRL- 149 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCC---------HH------------------------HHHHHHHHHHHHcCCchhhhhhh-
Confidence 775 99999988643321100 00 01112445677888753211111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. +.+++.++|+.+++.+++|++++
T Consensus 150 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~ 226 (259)
T PRK14274 150 HTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE---KYTIVIVTHNMQQAARVSDQTAF 226 (259)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc---CCEEEEEEcCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999999742 45677789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++.+|+++++.
T Consensus 227 l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 227 FYMGELVECNDTNKMF 242 (259)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998864
No 425
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=316.38 Aligned_cols=212 Identities=19% Similarity=0.291 Sum_probs=168.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++....+|+|.++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 46999999999999999999999999999999999997531123899999999876532 2356999999987776 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
||+||+.++...++.... . ......++.+++.+||........ ++..
T Consensus 94 tv~eni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN--------K------------------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC--------h------------------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999986543211000 0 001122456788889853211111 2344
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++++++++|+.+++.+++|++++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH---NLSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC---CCEEEEEecCHHHHHhhCcEEEEEECC
Confidence 57999999999999999999999999999999999999999999998742 467777999999999999999999999
Q ss_pred eEEEecChhHHH
Q 000541 406 QIVYQGPREHVL 417 (1433)
Q Consensus 406 ~iv~~G~~~~~~ 417 (1433)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 426
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-33 Score=301.53 Aligned_cols=168 Identities=30% Similarity=0.441 Sum_probs=148.6
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 5678877663 1359999999999999999999999999999999999876 458999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 917 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 917 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
..+++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888899999872 8999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. .+.+.+|++++|.+|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877999999999975 566688999999863
No 427
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-33 Score=310.07 Aligned_cols=197 Identities=29% Similarity=0.378 Sum_probs=164.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67888887763 2469999999999999999999999999999999999876 46899999998653
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000541 916 QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKR 995 (1433)
Q Consensus 916 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkR 995 (1433)
....++.++|++|++.+++..||.|++.+....+. . ..+.++++++.+++.+..+... ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---G----EELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22255678999999888889999999987553321 1 1234788999999987665543 4799999999
Q ss_pred HHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 996 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 996 l~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. .... |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~--~~~~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL--GLPG-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch--hhcc-CcEEeec
Confidence 99999999999999999999999999999999999998878999999999974 3344 8877664
No 428
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.4e-33 Score=313.96 Aligned_cols=209 Identities=22% Similarity=0.358 Sum_probs=169.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 488999998763 2469999999999999999999999999999999999876 5689999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~~LSg 990 (1433)
.. ..+++.++|++|++.+++ .||+||+.+....+.. ...++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ-----QPDPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC-----ChHHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 224567899999988776 4999999875443211 11234567899999995 344544 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|+++. + +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 8999999999753 4 56999999965444443
Q ss_pred Ec
Q 000541 1070 VG 1071 (1433)
Q Consensus 1070 ~G 1071 (1433)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 429
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-33 Score=310.21 Aligned_cols=197 Identities=27% Similarity=0.418 Sum_probs=163.7
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHD 239 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d 239 (1433)
+++.+ |+|+++++ |+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 11 ~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~ 84 (214)
T cd03297 11 PDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQY 84 (214)
T ss_pred CCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCC
Confidence 34444 99999999 999999999999999999999999987 999999998764211 235799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccc
Q 000541 240 NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTM 319 (1433)
Q Consensus 240 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 319 (1433)
.+++.+||+||+.+..... . .. .....++.+++.+||++..+..
T Consensus 85 ~~~~~~t~~~~l~~~~~~~---~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~~ 128 (214)
T cd03297 85 ALFPHLNVRENLAFGLKRK---R---------NR------------------------EDRISVDELLDLLGLDHLLNRY 128 (214)
T ss_pred ccCCCCCHHHHHHHHHhhC---C---------HH------------------------HHHHHHHHHHHHcCCHhHhhcC
Confidence 8888999999998764210 0 00 0012245678899998766655
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.++++++. .+++|++++|+.+++.+++|++
T Consensus 129 ~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~~~~d~i 202 (214)
T cd03297 129 PA-----QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKN-LNIPVIFVTHDLSEAEYLADRI 202 (214)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEecCHHHHHHhcCEE
Confidence 54 69999999999999999999999999999999999999999999998653 2566777999999999999999
Q ss_pred EEecCCeEEEec
Q 000541 400 ILISDGQIVYQG 411 (1433)
Q Consensus 400 ilL~~G~iv~~G 411 (1433)
++|++|+++.+|
T Consensus 203 ~~l~~G~i~~~g 214 (214)
T cd03297 203 VVMEDGRLQYIG 214 (214)
T ss_pred EEEECCEEEecC
Confidence 999999998875
No 430
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5e-33 Score=318.11 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=169.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCcc-----CCCCcc-------cceEEEEc
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHD-----MDEFVP-------QRTAAYIS 236 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 236 (1433)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 46999999999999999999999999999999999999987 9999999987 554322 23599999
Q ss_pred CCC--CCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc
Q 000541 237 QHD--NHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV 314 (1433)
Q Consensus 237 Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 314 (1433)
|++ .+.+.+|++||+.+.....+.. +. .+....++.+++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------~~-----------~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR----------------------HY-----------GDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC----------------------cH-----------HHHHHHHHHHHHHcCCCh
Confidence 996 3577889999997643211000 00 001123456888999964
Q ss_pred -cccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000541 315 -CADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETY 393 (1433)
Q Consensus 315 -~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 393 (1433)
..++.+ ..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+. .+.+|+.++|+..++.
T Consensus 143 ~~~~~~~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLP-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCC-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHH
Confidence 455544 469999999999999999999999999999999999999999999987653 3567777999999999
Q ss_pred hhcCeEEEecCCeEEEecChhHHH
Q 000541 394 DLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 394 ~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
+++|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988764
No 431
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-33 Score=366.12 Aligned_cols=209 Identities=29% Similarity=0.400 Sum_probs=176.9
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+||+|+|+. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 36999999999841 12469999999999999999999999999999999999987 569999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+++ ..+++.+|||+|++.+++ -|++||+.+.. | .+ ++.+.++++..++.+. .|+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 457788999999998875 59999998642 1 12 2345677777777643 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999886 589999999974 5778999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 432
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.8e-33 Score=306.78 Aligned_cols=178 Identities=26% Similarity=0.349 Sum_probs=150.1
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc-----ccccceEEEeccCCC-CCC
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ-----ETFARISGYCEQNDI-HSP 934 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~-~~~ 934 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999877 458999999987531 123567899999973 334
Q ss_pred CCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCC
Q 000541 935 NVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1014 (1433)
Q Consensus 935 ~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEP 1014 (1433)
..||+||+.+..... ..+..+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865432 1223334456788999999987766653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000541 1015 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1048 (1433)
Q Consensus 1015 TsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~ 1048 (1433)
|+|||+.++..+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999874
No 433
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=298.24 Aligned_cols=214 Identities=21% Similarity=0.348 Sum_probs=189.6
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcccceEEEEcCCCCC
Q 000541 162 LPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQRTAAYISQHDNH 241 (1433)
Q Consensus 162 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 241 (1433)
..++.+++.+++|+|+.++||+|++++|||||||||.+++|.|++.|+ +|+|+++|.+++... ...|||.|++.-+
T Consensus 8 vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGL 83 (300)
T COG4152 8 VTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGL 83 (300)
T ss_pred chhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhcc
Confidence 456677889999999999999999999999999999999999999998 999999999886543 3579999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++.+||.|.|.|-++++|... ++.....++.|+.+++......+|
T Consensus 84 y~k~tv~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~kI- 128 (300)
T COG4152 84 YPKMTVEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTKKI- 128 (300)
T ss_pred CccCcHHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccchH-
Confidence 999999999999999987521 112334577899999987776555
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
..||-|.+|++.+-.+++.+|++++||||+|||||-++..+-+.+.++.. .++|||..+|.++.+.++||++++
T Consensus 129 ----k~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llm 202 (300)
T COG4152 129 ----KELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLM 202 (300)
T ss_pred ----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhhe
Confidence 46999999999999999999999999999999999999999999998854 478888899999999999999999
Q ss_pred ecCCeEEEecChhHHHHHH
Q 000541 402 ISDGQIVYQGPREHVLEFF 420 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~~~f 420 (1433)
|++|+.|.+|+.+++..-|
T Consensus 203 L~kG~~V~~G~v~~ir~~~ 221 (300)
T COG4152 203 LKKGQTVLYGTVEDIRRSF 221 (300)
T ss_pred ecCCceEEeccHHHHHHhc
Confidence 9999999999999998754
No 434
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.7e-33 Score=356.38 Aligned_cols=206 Identities=22% Similarity=0.317 Sum_probs=166.3
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 246 (1433)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999998 9999999999876654 4789999999977765 9
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
++|||.++.. . + ..++.+..+.+++ +..++ .|++..||.+|+.+.
T Consensus 431 i~~NI~~~~~---~-~----d~~i~~a~~~~gl------------------------~~~i~--~lp~Gldt~i~e~g~- 475 (592)
T PRK10790 431 FLANVTLGRD---I-S----EEQVWQALETVQL------------------------AELAR--SLPDGLYTPLGEQGN- 475 (592)
T ss_pred HHHHHHhCCC---C-C----HHHHHHHHHHcCc------------------------HHHHH--hccccccccccCCCC-
Confidence 9999998631 0 0 0111111111110 11111 267788999998654
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.||||||||++|||||+.+|+|++||||||+||+.+..+|.+.|+++.. + .|+|.++|.. +....||+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~-~tvIivtHr~-~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--H-TTLVVIAHRL-STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEecch-HHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998642 3 4555567765 4566799999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 435
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=349.52 Aligned_cols=217 Identities=28% Similarity=0.330 Sum_probs=179.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 478899998773 2469999999999999999999999999999999999876 4689999999876
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 915 KQ----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 915 ~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
.. ..+++.+||++|++.+++.+||.||+.+....+.....+..+.++.++++++.+++.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 42 123467999999998899999999998753211111112333445688899999997666654 357999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYV 1070 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~ 1070 (1433)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+...+|++++|.+ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999888999999999975 46677899999985 788876
Q ss_pred cCC
Q 000541 1071 GSL 1073 (1433)
Q Consensus 1071 G~~ 1073 (1433)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 653
No 436
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=7.3e-33 Score=315.92 Aligned_cols=220 Identities=23% Similarity=0.302 Sum_probs=174.0
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 488999988763 2359999999999999999999999999999999999731125689999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCCHHHHHHHHHHhcCC----CCCChhHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000541 915 KQE---TFAR-ISGYCEQNDIHSPNVTVYESLLYSAWLRLP----LEVDSPTRKMFIEEVMELVELN-PLRQALVGLPGV 985 (1433)
Q Consensus 915 ~~~---~~~~-~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~----~~~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~ 985 (1433)
... ...+ .++|++|++.+++.+|+.|++.+....... .+....+..+.++++++.+++. ...+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999999775432110 0111122335567888999986 34444321
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hcceeEEecC
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEA-FDELFLLKRG 1064 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~-fd~~~ll~~g 1064 (1433)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++. +... +|++++|.+
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999998779999999999652 3344 799999975
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999986
No 437
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.8e-33 Score=309.09 Aligned_cols=199 Identities=22% Similarity=0.342 Sum_probs=166.6
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-ccceEEEEcCCCCCCCCCCHHH
Q 000541 171 ILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 249 (1433)
Q Consensus 171 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 249 (1433)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999987 999999999875432 2457999999998999999999
Q ss_pred HHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCCCc
Q 000541 250 TLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRGIS 329 (1433)
Q Consensus 250 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 329 (1433)
|+.+..... ... .. .....++.+++.+||++..++.+. .||
T Consensus 90 n~~~~~~~~-~~~--------~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKL--------NA-------------------------EQQEKVVDAAQQVGIADYLDRLPE-----QLS 130 (213)
T ss_pred HHHhHhhcc-CCc--------cH-------------------------HHHHHHHHHHHHcCcHHHhhCCcc-----cCC
Confidence 998753210 000 00 011234568899999876666554 699
Q ss_pred hhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCeEEE
Q 000541 330 GGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQIVY 409 (1433)
Q Consensus 330 GGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 409 (1433)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+. .+++|++++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSE-RQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998643 35677779999999999999999999999998
Q ss_pred ecC
Q 000541 410 QGP 412 (1433)
Q Consensus 410 ~G~ 412 (1433)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 438
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=317.60 Aligned_cols=211 Identities=21% Similarity=0.343 Sum_probs=166.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++..
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 359999999999999999999999999999999999853 4222389999999887431 124579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ +||+||+.++....+.... + .....++.+++.+|+.....+..
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKDK-----Q----------------------------VLDEAVEKSLKGASIWDEVKDRL- 142 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCcH-----H----------------------------HHHHHHHHHHHHcCCchhHHHHH-
Confidence 76 8999999987543221000 0 01112345677777743211111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
++..+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+.+|+|++
T Consensus 143 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~ 219 (252)
T PRK14239 143 HDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999998743 3 6777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+.+++.
T Consensus 220 l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 220 FLDGDLIEYNDTKQMF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999998874
No 439
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.2e-34 Score=360.81 Aligned_cols=211 Identities=30% Similarity=0.464 Sum_probs=176.4
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+|++|.++. ++.+|+|+|+.++|||.+||+||||||||||++.|.|..+ +.+|+|.+||++
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCEe
Confidence 45999999999852 3469999999999999999999999999999999999987 469999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcC-------CcccccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVE-------LNPLRQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~-------l~~~~~~~vg~~ 983 (1433)
+++ ..+++.++||+|+..++. -||+||+.++. | +.+++ .++++++..+ +.+-.|+.+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~e----ei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATDE----EIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCHH----HHHHHHHHhChHHHHHhCcccccceecCC
Confidence 654 457788999999998887 79999998862 1 12222 2333333332 233468888844
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++||||+++||+||+||||||+||+.+...|++.++++. +|+|+|+++|+++ ....+|++++|++
T Consensus 463 -G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 463 -GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999877 5789999999985 4556999999996
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 899999986
No 440
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2e-33 Score=313.84 Aligned_cols=209 Identities=27% Similarity=0.420 Sum_probs=168.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++. ..+.+|+|+|+++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 678888876631 12359999999999999999999999999999999999876 45899999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVG------LPGVS 986 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg------~~~~~ 986 (1433)
. ...++.++|++|++.+++ .||.|++.+... . .. +..++++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~----~--~~---~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP----L--AD---DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC----C--CC---HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223567999999987776 699999976421 1 11 2235677888888776655421 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. ..+.+|++++|.+ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999975 3478999999985 78
Q ss_pred EEEEc
Q 000541 1067 EIYVG 1071 (1433)
Q Consensus 1067 ~~y~G 1071 (1433)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 87654
No 441
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.6e-33 Score=364.76 Aligned_cols=206 Identities=26% Similarity=0.378 Sum_probs=165.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+| +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 45899999999999999999999999999999999999998 9999999999876653 57899999998666 56
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++..- . + ..++.+..+.+++ +..+ -.++...||.+|+.+
T Consensus 568 Ti~eNi~l~~~~--~-~----~~~i~~al~~~~l------------------------~~~i--~~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDPT--I-P----DADLVRACKDAAI------------------------HDVI--TSRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCCC--C-C----HHHHHHHHHHhCC------------------------HHHH--HhCcCcccceeccCC-
Confidence 999999875210 0 0 0111111111110 1111 137778899999876
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.+||||||||++||||++.+|++++||||||+||+.+..++.+.|++ . +.|+|.++|..+. ...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~-~~T~IiitHrl~~-i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----R-GCTCIIVAHRLST-IRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----c-CCEEEEEecCHHH-HHhCCEEEEEeCC
Confidence 47999999999999999999999999999999999999999999975 2 3455557777654 4669999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++.+|+++++.+
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 442
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=294.34 Aligned_cols=214 Identities=27% Similarity=0.425 Sum_probs=185.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++.+|+++++ +.+.+|+|+|..|++|.+++|+|||||||||||.+.+++.+ ..+|+|+++|.++.
T Consensus 2 I~i~nv~K~y-------------~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~ 66 (252)
T COG4604 2 ITIENVSKSY-------------GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELT 66 (252)
T ss_pred eeehhhhHhh-------------CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecc
Confidence 4566777665 35689999999999999999999999999999999998876 56999999999865
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCC--hhHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000541 916 Q---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVD--SPTRKMFIEEVMELVELNPLRQALVGLPGVSGLST 990 (1433)
Q Consensus 916 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~--~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSg 990 (1433)
. ..+++.++..-|+......+||+|-+.|+ |.|.+.. .++.+..+++.++.++|++++|+.. ..|||
T Consensus 67 ~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FG---RfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSG 138 (252)
T COG4604 67 STPSKELAKKLSILKQENHINSRLTVRDLVGFG---RFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSG 138 (252)
T ss_pred cCChHHHHHHHHHHHhhchhhheeEHHHHhhcC---CCcccCCCCchHHHHHHHHHHHHhcccchHHHhH-----Hhccc
Confidence 3 35667788889988888899999999987 5665432 2455667999999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecCcEEEE
Q 000541 991 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIY 1069 (1433)
Q Consensus 991 GqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y 1069 (1433)
|||||.-||+.|+++.+.++||||.++||...+..+|+.||+++++ |+|||++.||.+. .-...|.++.|++ |+++.
T Consensus 139 GQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~ 216 (252)
T COG4604 139 GQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVK 216 (252)
T ss_pred chhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEe
Confidence 9999999999999999999999999999999999999999999977 9999999998663 3345699999985 89999
Q ss_pred EcCCC
Q 000541 1070 VGSLG 1074 (1433)
Q Consensus 1070 ~G~~~ 1074 (1433)
.|++.
T Consensus 217 ~G~~~ 221 (252)
T COG4604 217 QGSPD 221 (252)
T ss_pred cCCHH
Confidence 99974
No 443
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=320.06 Aligned_cols=218 Identities=22% Similarity=0.258 Sum_probs=172.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--C-CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 911 (1433)
.+.++|+++.++ ++.+|+|+|+++++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 589999998773 1358999999999999999999999999999999999864 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGLPGV 985 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~~~~ 985 (1433)
.+... ..+++.++|++|++.+++ .||+||+.+....+. . .+....++.+.++++.+++.. +.+.+. ...
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG-I-KDKKTLDEIVEKSLRGAAIWDELKDRLH--DNA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC-C-CcHHHHHHHHHHHHHHcCCcchHHHHHh--cCc
Confidence 87632 234567999999988777 499999988653321 1 111222344567777765431 211111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.+ |
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-G 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-C
Confidence 57999999999999999999999999999999999999999999999875 799999999975 45678999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++..|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 99999875
No 444
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=5.3e-33 Score=317.18 Aligned_cols=215 Identities=25% Similarity=0.287 Sum_probs=172.6
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc-
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP- 913 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~- 913 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 378899988763 2358999999999999999999999999999999999987 468999999976
Q ss_pred ----CCcc-------cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-ccccc
Q 000541 914 ----KKQE-------TFARISGYCEQNDI--HSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQAL 979 (1433)
Q Consensus 914 ----~~~~-------~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~ 979 (1433)
.... ..++.++|++|++. ..+.+|+.|++.+.... ... .......+.++++++.+++.+ ..+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~-~~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMA-IGA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHH-hcc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 12346899999874 45668999998654221 111 011233456788999999963 44443
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcce
Q 000541 980 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDEL 1058 (1433)
Q Consensus 980 vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~ 1058 (1433)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 -----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 -----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred -----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998764 899999999974 456678999
Q ss_pred eEEecCcEEEEEcCC
Q 000541 1059 FLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1059 ~ll~~gG~~~y~G~~ 1073 (1433)
++|.+ |++++.|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 899998875
No 445
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-33 Score=319.20 Aligned_cols=219 Identities=18% Similarity=0.227 Sum_probs=173.9
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~ 910 (1433)
.-+.++|+++.++ ++.+|+|+|+.+++||+++|+||||||||||+++|+|...+. +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3589999998773 236999999999999999999999999999999999986421 258999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCC
Q 000541 911 GYPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGV 985 (1433)
Q Consensus 911 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~ 985 (1433)
|.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.+++.++.+++......... ...
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~ 159 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLK-EKG 159 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhc-CCc
Confidence 987532 2345679999999887765 99999987643321 11 1223445677787776421111111 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe---
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK--- 1062 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~--- 1062 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.
T Consensus 160 ~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~ 237 (274)
T PRK14265 160 TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEI 237 (274)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 57999999999999999999999999999999999999999999999865 799999999975 5778899999997
Q ss_pred -----cCcEEEEEcCC
Q 000541 1063 -----RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 -----~gG~~~y~G~~ 1073 (1433)
+.|++++.|+.
T Consensus 238 ~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 238 DEYGKRRGKLVEFSPT 253 (274)
T ss_pred ccccccCceEEEeCCH
Confidence 25899999986
No 446
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.9e-33 Score=320.40 Aligned_cols=210 Identities=20% Similarity=0.280 Sum_probs=172.3
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++. +...+|+|+|+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988741 12358999999999999999999999999999999999875 379999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGL------PGV 985 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~------~~~ 985 (1433)
.. ...++.++|++|++.+++ .|++||+.... + .. .+.+.++++.++|.+..+...+. .+.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~----~--~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG----K--WS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc----C--CC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 245677999999998887 49999995321 0 11 23456778888887655554321 124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++. .++|||+++|+++ ....+|++++|.+ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999875 4899999999974 4456999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
+++++|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 447
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=349.20 Aligned_cols=206 Identities=26% Similarity=0.323 Sum_probs=172.7
Q ss_pred eeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCCCCCCCC
Q 000541 861 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQNDIHSPNV 936 (1433)
Q Consensus 861 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~~~~~l 936 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 4589999999876421 2345799999998888999
Q ss_pred CHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCC
Q 000541 937 TVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1016 (1433)
Q Consensus 937 Tv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTs 1016 (1433)
||+|++.+..........+.....+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111122333456888999999987666653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCCCc
Q 000541 1017 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSLGR 1075 (1433)
Q Consensus 1017 gLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~~~ 1075 (1433)
|||+.++..+.+.|+++++.|+|||+++|++. ++.+.+|++++|.+ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999888999999999974 46677899999985 89999998643
No 448
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-34 Score=322.36 Aligned_cols=209 Identities=27% Similarity=0.434 Sum_probs=172.1
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc---ccceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 244 (1433)
++++|+||||++.||+.++++||||+||||++++|-...+-+ +|.|+++|+++.... .++.||.||||..+| +
T Consensus 550 ~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLF-N 625 (790)
T KOG0056|consen 550 GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLF-N 625 (790)
T ss_pred CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceee-c
Confidence 467999999999999999999999999999999999999877 999999999986543 356899999987666 4
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEM 324 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 324 (1433)
-|+-.||.|+.. +..-|+..+|+ ++..+.| +++++++..+|+||+++
T Consensus 626 dTI~yNIryak~-------------------------~AsneevyaAA-----kAA~IHd---rIl~fPegY~t~VGERG 672 (790)
T KOG0056|consen 626 DTILYNIRYAKP-------------------------SASNEEVYAAA-----KAAQIHD---RILQFPEGYNTRVGERG 672 (790)
T ss_pred ceeeeheeecCC-------------------------CCChHHHHHHH-----HHhhHHH---HHhcCchhhhhhhhhcc
Confidence 599999988631 11111111111 1222334 35679999999999999
Q ss_pred cCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecC
Q 000541 325 LRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISD 404 (1433)
Q Consensus 325 ~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 404 (1433)
.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|+ +.|..+ +.--+|.|+++++
T Consensus 673 Lk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIV-vAHRLS-TivnAD~ILvi~~ 747 (790)
T KOG0056|consen 673 LK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIV-VAHRLS-TIVNADLILVISN 747 (790)
T ss_pred cc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEE-Eeeeeh-heecccEEEEEeC
Confidence 97 999999999999999999999999999999999999999999999875 577777 445443 3346899999999
Q ss_pred CeEEEecChhHHHH
Q 000541 405 GQIVYQGPREHVLE 418 (1433)
Q Consensus 405 G~iv~~G~~~~~~~ 418 (1433)
|+|++.|.++|+..
T Consensus 748 G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 748 GRIVERGRHEELLK 761 (790)
T ss_pred CeEeecCcHHHHHh
Confidence 99999999999875
No 449
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=315.44 Aligned_cols=208 Identities=18% Similarity=0.275 Sum_probs=163.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-----CCCCcceEEEECCccCCCCc-----ccceEEEEcCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD-----SSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQH 238 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 238 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+ +|+|.++|+++.... .++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 359999999999999999999999999999999999864 34 899999998875321 23569999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
+.+++. ||+||+.++....+... .. .....++..++.+|+.+....
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR---------KS------------------------VLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc---------HH------------------------HHHHHHHHHHHHcCCCcchHH
Confidence 877774 99999998643211000 00 001123445677777421101
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.. ++.+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +++|+.++|+.+++.+++|+
T Consensus 157 ~~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~~~~~~d~ 232 (268)
T PRK14248 157 RL-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE---EYSIIIVTHNMQQALRVSDR 232 (268)
T ss_pred HH-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc---CCEEEEEEeCHHHHHHhCCE
Confidence 11 233456999999999999999999999999999999999999999999999743 35677789999999999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000541 399 IILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~ 417 (1433)
|++|++|++++.|+.+++.
T Consensus 233 v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 233 TAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 450
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.7e-32 Score=351.64 Aligned_cols=212 Identities=29% Similarity=0.429 Sum_probs=175.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|++|.++. +++.+|+|+|+.++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEe
Confidence 46999999998841 12459999999999999999999999999999999999987 468999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+++ ..+++.++||+|++.+++ .|++||+.+.. | +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 456788999999987775 59999997631 1 122 2334555666665433 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .++|+|+++|+++ ....+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999984 5899999999975 4567999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 451
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-33 Score=328.82 Aligned_cols=202 Identities=26% Similarity=0.411 Sum_probs=168.0
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 244 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 244 (1433)
+.++|+|+|+++++||.++|+|++|||||||++.|+|-++|+ +|+|+.||.++.+... ++.++.++|.. |+..
T Consensus 350 ~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~-hlF~ 425 (573)
T COG4987 350 QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRV-HLFS 425 (573)
T ss_pred ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccch-HHHH
Confidence 346999999999999999999999999999999999999998 9999999999877655 46789999976 6667
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhC-------CCcccc
Q 000541 245 MTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILG-------LDVCAD 317 (1433)
Q Consensus 245 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-------L~~~~d 317 (1433)
-|+|+||..+.. +...++. -.+++..| .++..|
T Consensus 426 ~Tlr~NL~lA~~-------------------------~AsDEel---------------~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 426 GTLRDNLRLANP-------------------------DASDEEL---------------WAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred HHHHHHHhhcCC-------------------------CCCHHHH---------------HHHHHHcCHHHHHHhChhhhh
Confidence 799999998632 1111111 11233333 455778
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
|.+|+.+. .||||||||++|||+|+.++++++|||||.|||+.|..++++.+.+-+ +++|++.++|+...+ +.||
T Consensus 466 t~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~---~~kTll~vTHrL~~l-e~~d 540 (573)
T COG4987 466 TWLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA---EGKTLLMVTHRLRGL-ERMD 540 (573)
T ss_pred chhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh---cCCeEEEEecccccH-hhcC
Confidence 89997655 699999999999999999999999999999999999999999998743 466777788887665 5789
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000541 398 DIILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~~ 418 (1433)
+|++|++|+++++|.+.++..
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999864
No 452
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-33 Score=317.81 Aligned_cols=218 Identities=19% Similarity=0.246 Sum_probs=172.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC--C-eeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G 911 (1433)
.+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 488999998773 23699999999999999999999999999999999997542 1 2589999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKK-----QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++. ...+++.++|++|++.+++ .||.||+.+....+. .. ...++.++++++.+++.+..+.... ....
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567999999988777 499999987653321 11 1223456677777777431111111 1245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec---
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR--- 1063 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~--- 1063 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999975 57788999999982
Q ss_pred -----CcEEEEEcCC
Q 000541 1064 -----GGQEIYVGSL 1073 (1433)
Q Consensus 1064 -----gG~~~y~G~~ 1073 (1433)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4899999885
No 453
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=315.48 Aligned_cols=211 Identities=22% Similarity=0.354 Sum_probs=167.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+++++||+++|+|||||||||||++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 46999999999999999999999999999999999998741 11389999999887532 123579999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ +||+||+.++....+.... . .....++..++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~---------~------------------------~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK---------H------------------------KLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------H------------------------HHHHHHHHHHHHcCCCchhHHH-H
Confidence 77 8999999986542211000 0 0111234567777775321111 1
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.+ +++++.++|+.+++.+++|++++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE---NYTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc---CcEEEEEeCCHHHHHHhCCEEEE
Confidence 334557999999999999999999999999999999999999999999999743 35777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988764
No 454
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-33 Score=358.64 Aligned_cols=210 Identities=22% Similarity=0.361 Sum_probs=178.0
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|++|.++. ++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 46999999998841 1359999999999999999999999999999999999987 458999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLR-------QALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~-------~~~vg~~ 983 (1433)
+++ ..+++.++||+|++.+++. |++||+.++. + .+ ++.++++++.+|+.+.- |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~----~--~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR----D--IS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4567889999999998876 9999998752 1 12 23467778888876433 4556553
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++.+ ++|+|+++|++ +....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~--~~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRL--STIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecch--HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999864 69999999997 45678999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 455
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1e-32 Score=314.63 Aligned_cols=206 Identities=23% Similarity=0.286 Sum_probs=167.5
Q ss_pred eeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CcceEEEECCccCCCCcc-cceEEEEcCCCC--CCCCC
Q 000541 170 TILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL-RVSGRVTYNGHDMDEFVP-QRTAAYISQHDN--HIGEM 245 (1433)
Q Consensus 170 ~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 245 (1433)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999998710 028999999988754322 256999999974 44668
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc---cccccccC
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV---CADTMVGD 322 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~vg~ 322 (1433)
|+.+++.+.++..+.. . ....++.+++.+||.+ ..++.+
T Consensus 97 ~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~~~~~~~~-- 138 (254)
T PRK10418 97 TMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAARVLKLYP-- 138 (254)
T ss_pred cHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChhhhhhcCC--
Confidence 9999987644321110 0 0022456788899975 234443
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. .+++|++++|+.+++.+++|++++|
T Consensus 139 ---~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 139 ---FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999998653 3567777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 456
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.9e-33 Score=352.68 Aligned_cols=201 Identities=27% Similarity=0.437 Sum_probs=165.2
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 35899999999999999999999999999999999999998 9999999999877654 467999999986664 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCC------Ccccccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGL------DVCADTM 319 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL------~~~~dt~ 319 (1433)
|++||+.++... .+.+. ++.+++..|+ ++..||.
T Consensus 429 ti~~Ni~~~~~~-------------------------~~~~~---------------i~~al~~~~l~~~i~~p~GldT~ 468 (574)
T PRK11160 429 TLRDNLLLAAPN-------------------------ASDEA---------------LIEVLQQVGLEKLLEDDKGLNAW 468 (574)
T ss_pred cHHHHhhcCCCc-------------------------cCHHH---------------HHHHHHHcCCHHHHcCccccCch
Confidence 999999886310 00000 1112222222 6678999
Q ss_pred ccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeE
Q 000541 320 VGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDI 399 (1433)
Q Consensus 320 vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 399 (1433)
||+.+. .||||||||++|||+++.+|++++|||||++||+.+...+.+.|++.. . ++|++.++|..+.+ ..+|+|
T Consensus 469 vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~-~~tviiitHr~~~~-~~~d~i 543 (574)
T PRK11160 469 LGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--Q-NKTVLMITHRLTGL-EQFDRI 543 (574)
T ss_pred hcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--C-CCEEEEEecChhHH-HhCCEE
Confidence 998654 699999999999999999999999999999999999999999999863 2 44555577776555 569999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000541 400 ILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 400 ilL~~G~iv~~G~~~~~~~ 418 (1433)
++|++|++++.|+++++.+
T Consensus 544 ~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEeCCeEEEeCCHHHHHh
Confidence 9999999999999998864
No 457
>KOG0059 consensus Lipid exporter ABCA1 and related proteins, ABC superfamily [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.1e-31 Score=351.86 Aligned_cols=206 Identities=30% Similarity=0.451 Sum_probs=182.6
Q ss_pred eeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCcc----cccceEEEeccCCCCCCCCCH
Q 000541 863 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQE----TFARISGYCEQNDIHSPNVTV 938 (1433)
Q Consensus 863 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~~~~~lTv 938 (1433)
+++++|+.|++||+.|++|+|||||||++++|+|..+ +.+|+++++|+++... ..++.+|||||+|.+.+.+|.
T Consensus 580 Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~--~t~G~a~i~g~~i~~~~~~~~~~~~iGyCPQ~d~l~~~lT~ 657 (885)
T KOG0059|consen 580 AVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETK--PTSGEALIKGHDITVSTDFQQVRKQLGYCPQFDALWEELTG 657 (885)
T ss_pred hhcceEEEecCCceEEEecCCCCCchhhHHHHhCCcc--CCcceEEEecCccccccchhhhhhhcccCCchhhhhhhccH
Confidence 8999999999999999999999999999999999887 5699999999987531 256779999999999999999
Q ss_pred HHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 000541 939 YESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1018 (1433)
Q Consensus 939 ~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgL 1018 (1433)
||+|.+.|++|. .+..+.++.++++++.++|.+.+++.++ .+|||+|||+++|.+|+.+|++++|||||+|+
T Consensus 658 rEhL~~~arlrG---~~~~di~~~v~~ll~~~~L~~~~~~~~~-----~ySgG~kRkLs~aialig~p~vi~LDEPstGm 729 (885)
T KOG0059|consen 658 REHLEFYARLRG---LPRSDIGSAIEKLLRLVGLGPYANKQVR-----TYSGGNKRRLSFAIALIGDPSVILLDEPSTGL 729 (885)
T ss_pred HHHHHHHHHHcC---CChhHHHHHHHHHHHHcCChhhhccchh-----hCCCcchhhHHHHHHHhcCCCEEEecCCCCCC
Confidence 999999999984 3334556669999999999999998854 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHH-HhcceeEEecCcEEEEEcCCCcChhHHHHHHh
Q 000541 1019 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVE-AFDELFLLKRGGQEIYVGSLGRHSSHLIKYFE 1085 (1433)
Q Consensus 1019 D~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~-~fd~~~ll~~gG~~~y~G~~~~~~~~~~~yF~ 1085 (1433)
||.+++.+++.++++.++|+.||.|+|. ++.+| +|||+.+|.+ |+....|+. +++...|.
T Consensus 730 DP~arr~lW~ii~~~~k~g~aiiLTSHs--MeE~EaLCtR~aImv~-G~l~ciGs~----q~LKsrfG 790 (885)
T KOG0059|consen 730 DPKARRHLWDIIARLRKNGKAIILTSHS--MEEAEALCTRTAIMVI-GQLRCIGSP----QELKSRYG 790 (885)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEcCC--HHHHHHHhhhhheeec-CeeEEecCh----HHHHhhcC
Confidence 9999999999999999888899999995 55554 5899999986 899999997 45665554
No 458
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-33 Score=315.16 Aligned_cols=219 Identities=23% Similarity=0.307 Sum_probs=172.8
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC----eeeeEEEEc
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG----YISGSIMIS 910 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~----~~~G~I~i~ 910 (1433)
.+.++|++++++ ++.+|+|+|+.+.+||+++|+|+||||||||+++|+|...+. .+.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 378899988763 346999999999999999999999999999999999987632 122555555
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccc-cccccCCCCC
Q 000541 911 GYPKKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLR-QALVGLPGVS 986 (1433)
Q Consensus 911 G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~-~~~vg~~~~~ 986 (1433)
|.+... ...++.++|++|++.+++.+|++||+.+...... .....+..+.++++++.+++.+.. +.... ...
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~ 152 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNS--PAS 152 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcC--Ccc
Confidence 554421 2345679999999999999999999988643321 112233445678889999986321 11111 235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||+|||||++||++|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|.+ |+
T Consensus 153 ~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~ 229 (257)
T PRK14246 153 QLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GE 229 (257)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999975 45678999999985 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 230 i~~~g~~ 236 (257)
T PRK14246 230 LVEWGSS 236 (257)
T ss_pred EEEECCH
Confidence 9999875
No 459
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=315.37 Aligned_cols=211 Identities=22% Similarity=0.362 Sum_probs=165.3
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDS--SLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.+
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14240 16 FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNP 95 (250)
T ss_pred ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCcc
Confidence 3589999999999999999999999999999999998753 112389999999987531 124569999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ +||+||+.++....+.... . .....++.+++.+++.+......
T Consensus 96 ~~-~t~~~ni~~~~~~~~~~~~---------~------------------------~~~~~~~~~l~~~~l~~~l~~~~- 140 (250)
T PRK14240 96 FP-MSIYDNVAYGPRTHGIKDK---------K------------------------KLDEIVEKSLKGAALWDEVKDRL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHhcCCCCH---------H------------------------HHHHHHHHHHHHcCCchhhHHHH-
Confidence 77 8999999987543221000 0 01122344566777642111111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. . +++|+.++|+.+++.+++|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~sH~~~~~~~~~d~v~~ 217 (250)
T PRK14240 141 KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--K-DYTIVIVTHNMQQASRISDKTAF 217 (250)
T ss_pred hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEEeCHHHHHhhCCEEEE
Confidence 22345699999999999999999999999999999999999999999999874 2 45677789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 218 FLNGEIVEFGDTVDLF 233 (250)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 460
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=319.58 Aligned_cols=210 Identities=22% Similarity=0.332 Sum_probs=164.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 359999999999999999999999999999999999986310 1389999999876421 123569999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ .||+||+.+++...+.. .+ ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~------~~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT------GD-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc------HH-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 59999999876432210 00 0012334566666642111111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.+||.++|+..++.++||++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~---~~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK---NFTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcCEEEE
Confidence 233457999999999999999999999999999999999999999999998742 36777799999999999999999
Q ss_pred ecC-----------CeEEEecChhHHHH
Q 000541 402 ISD-----------GQIVYQGPREHVLE 418 (1433)
Q Consensus 402 L~~-----------G~iv~~G~~~~~~~ 418 (1433)
|++ |++++.|+++++.+
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHHh
Confidence 996 67899999988753
No 461
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=357.63 Aligned_cols=213 Identities=23% Similarity=0.330 Sum_probs=177.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|++|+++. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 36999999998842 12469999999999999999999999999999999999987 568999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
.++ ..+++.++|++|++.+++ -|++||+.++. +.+.+ ++.++++++..++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456788999999988876 59999997641 21122 2345666777665442 36667754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999875 4799999999974 5788999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 462
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-33 Score=355.25 Aligned_cols=212 Identities=27% Similarity=0.423 Sum_probs=178.5
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+|+++.++. +++.+|+|+|++++|||.+||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999998841 12359999999999999999999999999999999999987 568999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLR------QALVGLPG 984 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~------~~~vg~~~ 984 (1433)
+++ ..+++.++||+|++.+++ -|++||+.++. | +. .++.++++++..++.+.. |+.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 356778999999988776 59999998752 1 11 234467788888887643 4556554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 985 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 985 ~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
...||||||||++|||+|+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 45799999999999999999999999999999999999999999999985 5899999999985 4567999999985
Q ss_pred cEEEEEcCC
Q 000541 1065 GQEIYVGSL 1073 (1433)
Q Consensus 1065 G~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999874
No 463
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-33 Score=314.96 Aligned_cols=208 Identities=25% Similarity=0.356 Sum_probs=166.1
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999887531 123569999999989
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
++.+|++||+.++....+...+. +.....+..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~~---------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDRD---------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCHH---------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 99999999998765322110000 0011123345555543 2334
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+. ++.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.+ ++++++++|+..++.+++|
T Consensus 144 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TP-----ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK---VTTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCC
Confidence 44 446999999999999999999999999999999999999999999998742 3677778999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988874
No 464
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=314.88 Aligned_cols=219 Identities=22% Similarity=0.286 Sum_probs=174.2
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCC--C-CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 911 (1433)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... + .+.+|+|.+||
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367889988763 2469999999999999999999999999999999999753 1 12689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
.++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+..++.+.++++.+++.+........ ...
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87642 1345679999999888875 99999987643221 112233445677888888885421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ |+|||+++|++. ++.+.+|++++|.+ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999975 56777888888875 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 9999885
No 465
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=315.46 Aligned_cols=212 Identities=20% Similarity=0.312 Sum_probs=167.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCCc-----ccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEFV-----PQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ ++...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21123899999998764321 24579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++. ||+||+.++....+.... . ......++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------K------------------------KKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------H------------------------HHHHHHHHHHHHHcCCCchhhhHh-
Confidence 775 999999886432211000 0 001122456788899865322222
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. . +.+|++++|+..++.+++|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEE
Confidence 23345799999999999999999999999999999999999999999999873 2 46777799999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 466
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-33 Score=316.47 Aligned_cols=212 Identities=21% Similarity=0.290 Sum_probs=169.6
Q ss_pred cccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCC
Q 000541 166 KKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQH 238 (1433)
Q Consensus 166 ~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 238 (1433)
++++.+|+|+|++++|||+++|+||||||||||+++|+|.++|. ...+|+|.++|+++... ..++.++|++|+
T Consensus 18 ~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 97 (261)
T PRK14263 18 YGNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQ 97 (261)
T ss_pred eCCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecC
Confidence 34567999999999999999999999999999999999999761 01389999999987431 123569999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
+..+ .+|++||+.++....+. . . +....++.+++.+||.+..+.
T Consensus 98 ~~~~-~~tv~enl~~~~~~~~~--~----~-----------------------------~~~~~~~~~l~~~~l~~~i~~ 141 (261)
T PRK14263 98 PNPF-SMSIFDNVAFGLRLNRY--K----G-----------------------------DLGDRVKHALQGAALWDEVKD 141 (261)
T ss_pred Cccc-cccHHHHHHHHHhhcCc--h----H-----------------------------HHHHHHHHHHHHcCCchhhhh
Confidence 8766 69999999987543210 0 0 001224557788887543322
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.. +...+.||||||||++|||||+.+|++++|||||+|||+.++.++.+.|+++. . +++++.++|+..++.+++|+
T Consensus 142 ~~-~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~~~~d~ 217 (261)
T PRK14263 142 KL-KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--K-DYTIALVTHNMQQAIRVADT 217 (261)
T ss_pred hh-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHHhCCE
Confidence 22 23456799999999999999999999999999999999999999999999874 2 46777799999999999999
Q ss_pred EEEec--------CCeEEEecChhHHH
Q 000541 399 IILIS--------DGQIVYQGPREHVL 417 (1433)
Q Consensus 399 vilL~--------~G~iv~~G~~~~~~ 417 (1433)
|++|+ +|++++.|+.+++.
T Consensus 218 v~~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 218 TAFFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEEEecccccccCCceEEEeCCHHHHH
Confidence 99996 89999999988764
No 467
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=6.3e-33 Score=315.05 Aligned_cols=197 Identities=26% Similarity=0.368 Sum_probs=167.0
Q ss_pred eeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHH
Q 000541 863 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ---ETFARISGYCEQNDIHSPNVTVY 939 (1433)
Q Consensus 863 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 939 (1433)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ . +|+|.++|.++.. ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~--~-~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP--G-SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--C-CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999874 3 8999999987643 22345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCeEEEe
Q 000541 940 ESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1012 (1433)
Q Consensus 940 E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrkRl~ia~~L~~-------~p~il~LD 1012 (1433)
||+.+.... ..+.....+.++++++.+++.+..+.. ...||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345678899999998766654 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcEEEEEcCC
Q 000541 1013 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1013 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~~~y~G~~ 1073 (1433)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999975 46788999999985 899999875
No 468
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-33 Score=317.98 Aligned_cols=209 Identities=26% Similarity=0.344 Sum_probs=163.5
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 56788776631 11358999999999999999999999999999999999987 468999999986532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHH-----HHHHHHHHc--CCcccccccccCCCCC
Q 000541 917 ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKM-----FIEEVMELV--ELNPLRQALVGLPGVS 986 (1433)
Q Consensus 917 ---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~-----~v~~vl~~l--~l~~~~~~~vg~~~~~ 986 (1433)
...++.++|++|+..+++ .||+||+.+.... .......+ ..++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999987776 6999999765321 11111111 123444444 444333332 45
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ |+|||+++|++. ++ +.+|++++|.+ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999975 34 45999999986 78
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
++..|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 9888874
No 469
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=322.46 Aligned_cols=207 Identities=20% Similarity=0.359 Sum_probs=164.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
..+|+|+|++|++||+++|+|||||||||||++|+|..+ |....+|+|.++|.++... ..++.++|++|++.+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 131 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNP 131 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchHHhhhcEEEECCCCCC
Confidence 469999999999999999999999999999999999854 3001289999999876432 124579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
++. ||+||+.++.+..+.... . .....++.+++.+|+. +..+
T Consensus 132 ~~~-tv~enl~~~~~~~~~~~~--------~-------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 177 (286)
T PRK14275 132 FPK-SIFDNIAYGPRLHGINDK--------K-------------------------QLEEIVEKSLRKAALWDEVSDRLD 177 (286)
T ss_pred Ccc-CHHHHHHhHHHhcCCCcH--------H-------------------------HHHHHHHHHHHHhCCccchhhHhh
Confidence 774 999999987543211000 0 0011234566777763 2233
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+ .+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ +++|++++|+.+++.+++|
T Consensus 178 ~-----~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~---~~tvIivsH~~~~~~~~~d 249 (286)
T PRK14275 178 K-----NALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG---SYTIMIVTHNMQQASRVSD 249 (286)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc---CCeEEEEeCCHHHHHHhCC
Confidence 3 3456999999999999999999999999999999999999999999998743 3677779999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000541 398 DIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~~G~iv~~G~~~~~~ 417 (1433)
++++|++|+++..|+.+++.
T Consensus 250 ~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 250 YTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 470
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-33 Score=317.53 Aligned_cols=213 Identities=28% Similarity=0.407 Sum_probs=170.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCcceEEEECCccCCCCcc---cceEEEEcCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS-----LRVSGRVTYNGHDMDEFVP---QRTAAYISQHDN 240 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 240 (1433)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 46999999999999999999999999999999999999874 1137999999988754322 345899999977
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
.++.+||+||+.++...... .. .... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~---~~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RA---GALT-------------------------HRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--cc---ccCC-------------------------HHHHHHHHHHHHHcCcHhhhcCCc
Confidence 66779999999885311000 00 0000 001123566889999987666554
Q ss_pred cCcccCCCchhHhhHHHHHHHHh---------CCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhh
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMV---------GPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPE 391 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~---------~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 391 (1433)
+ .|||||||||+||++|+ .+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.++
T Consensus 144 ~-----~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tviiisH~~~~ 217 (272)
T PRK13547 144 T-----TLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARD-WNLGVLAIVHDPNL 217 (272)
T ss_pred c-----cCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEECCHHH
Confidence 4 69999999999999999 599999999999999999999999999998653 25667778999999
Q ss_pred HHhhcCeEEEecCCeEEEecChhHHH
Q 000541 392 TYDLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 392 ~~~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999988763
No 471
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.9e-33 Score=359.69 Aligned_cols=208 Identities=30% Similarity=0.493 Sum_probs=167.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999998 9999999999877654 468999999986665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++.. +.+.+.+.++....+ ..+ .+ -.|++..||.+|+.+.
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~-----l~~-~i--~~lp~gl~T~i~e~G~ 600 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG-----VTE-FV--RRHPDGLDMQIGERGR 600 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC-----hHH-HH--HhCcccccceecCCCC
Confidence 99999988521 001111111111000 011 11 1378889999998764
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.||||||||++||||++.+|++++||||||+||+.+...|.+.|+++. ++.|++.++|..+ +.+.||+|++|++|
T Consensus 601 -~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~---~~~T~iiItHrl~-~~~~~D~iivl~~G 675 (694)
T TIGR03375 601 -SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL---AGKTLVLVTHRTS-LLDLVDRIIVMDNG 675 (694)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh---CCCEEEEEecCHH-HHHhCCEEEEEeCC
Confidence 699999999999999999999999999999999999999999999864 2455555777764 55789999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+++++|+++++.+
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999865
No 472
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-32 Score=313.22 Aligned_cols=219 Identities=26% Similarity=0.316 Sum_probs=169.8
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.++ .+.+|+|+|+.|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788888763 23599999999999999999999999999999999998421156899999998754
Q ss_pred cc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHH-hcC--CCC-CChhHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000541 916 QE---T-FARISGYCEQNDIHSPNVTVYESLLYSAW-LRL--PLE-VDSPTRKMFIEEVMELVELN-PLRQALVGLPGVS 986 (1433)
Q Consensus 916 ~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~-lr~--~~~-~~~~~~~~~v~~vl~~l~l~-~~~~~~vg~~~~~ 986 (1433)
.. . .++.++|++|++.+++.+|+.+++.+... ++. ... .......+.++++++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 22468999999888888888777653211 110 000 11122345677888888884 3444432 13
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHH-hcceeEEecCc
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEA-FDELFLLKRGG 1065 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~-fd~~~ll~~gG 1065 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|++. .+... +|++++|.+ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999965 23333 799999974 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 99999875
No 473
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.8e-33 Score=304.84 Aligned_cols=185 Identities=26% Similarity=0.336 Sum_probs=156.9
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ .+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 5677777653 2469999999999999999999999999999999999876 468999999987532
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000541 917 --ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQRK 994 (1433)
Q Consensus 917 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqrk 994 (1433)
..+++.++|++|++.+++.+||.|++.+....+. .+ ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~-----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG-----GA--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC-----Cc--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2244678999999888888999999987643321 11 235678899999987766553 479999999
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000541 995 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1048 (1433)
Q Consensus 995 Rl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~ 1048 (1433)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||+++|++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~ 188 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL 188 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc
Confidence 999999999999999999999999999999999999998878999999999974
No 474
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-33 Score=314.82 Aligned_cols=211 Identities=20% Similarity=0.349 Sum_probs=165.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLD--SSLRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 459999999999999999999999999999999999986 2111389999999886431 124569999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++ .||+||+.++....+.... + .....++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL- 141 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-
Confidence 75 7999999886532211000 0 00112455677788842110001
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ +++|+.++|+.+++.+++|+|++
T Consensus 142 ~~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~---~~tiiiisH~~~~~~~~~d~i~~ 218 (251)
T PRK14251 142 DRNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH---QYTFIMVTHNLQQAGRISDQTAF 218 (251)
T ss_pred ccChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc---CCeEEEEECCHHHHHhhcCEEEE
Confidence 233457999999999999999999999999999999999999999999998742 36777799999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 219 LMNGDLIEAGPTEEMF 234 (251)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 475
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-33 Score=300.83 Aligned_cols=170 Identities=31% Similarity=0.444 Sum_probs=149.1
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5678877663 2469999999999999999999999999999999999876 468999999987542
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000541 917 -----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTE 991 (1433)
Q Consensus 917 -----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgG 991 (1433)
...++.++|++|++.+++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999998888889999998531 8999
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHHhcceeEEecC
Q 000541 992 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIVEAFDELFLLKRG 1064 (1433)
Q Consensus 992 qrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~t~Hqp~~~~~~~fd~~~ll~~g 1064 (1433)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999887 899999999974 455679999999863
No 476
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.4e-33 Score=365.21 Aligned_cols=210 Identities=29% Similarity=0.409 Sum_probs=175.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 36999999999852 12459999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+.+ ..+++.+|||+|++.+++ -|++||+.++. | +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 457889999999998875 59999997641 1 122 2335666777776543 35566654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 368999999999999999999999999999999999999999999986 4899999999974 5677999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 477
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-34 Score=290.77 Aligned_cols=216 Identities=24% Similarity=0.380 Sum_probs=184.2
Q ss_pred cccccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCccc---ceEEEEcCC
Q 000541 162 LPSRKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVPQ---RTAAYISQH 238 (1433)
Q Consensus 162 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~ 238 (1433)
..+..+++.+|+|+|..|++|.+|+++|||||||||||.+++.+++.+ +|+|+++|.++.....+ +.++..-|+
T Consensus 7 v~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~ 83 (252)
T COG4604 7 VSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQE 83 (252)
T ss_pred hhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhh
Confidence 345567788999999999999999999999999999999999999988 99999999998766543 567888898
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccc
Q 000541 239 DNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADT 318 (1433)
Q Consensus 239 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 318 (1433)
...-..+||||-+.||.- +.++-+ +. .+....++..++-|.|++..|.
T Consensus 84 N~i~~rlTV~dLv~FGRf---PYSqGR----lt-------------------------~eD~~~I~~aieyl~L~~l~dr 131 (252)
T COG4604 84 NHINSRLTVRDLVGFGRF---PYSQGR----LT-------------------------KEDRRIINEAIEYLHLEDLSDR 131 (252)
T ss_pred chhhheeEHHHHhhcCCC---cccCCC----Cc-------------------------hHHHHHHHHHHHHhcccchHHH
Confidence 877789999999999732 111111 11 1123457788999999988775
Q ss_pred cccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCe
Q 000541 319 MVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDD 398 (1433)
Q Consensus 319 ~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 398 (1433)
.+ ..||||||||.-||..++.+.+.++||||.+.||-..+.++++.||++++..++|+|+ +.|+...+-.++|+
T Consensus 132 yL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~ 205 (252)
T COG4604 132 YL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDH 205 (252)
T ss_pred hH-----HhcccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhh
Confidence 55 4699999999999999999999999999999999999999999999999988766655 77999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000541 399 IILISDGQIVYQGPREHVLE 418 (1433)
Q Consensus 399 vilL~~G~iv~~G~~~~~~~ 418 (1433)
|+-|++|+++.+|+++++.+
T Consensus 206 IVAlK~G~vv~~G~~~eii~ 225 (252)
T COG4604 206 IVALKNGKVVKQGSPDEIIQ 225 (252)
T ss_pred eeeecCCEEEecCCHHHhcC
Confidence 99999999999999999864
No 478
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=316.38 Aligned_cols=211 Identities=26% Similarity=0.353 Sum_probs=168.7
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCCc----ccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEFV----PQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 242 (1433)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 46999999999999999999999999999999999998751 013899999998875431 245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+ .||+||+.++...... .... +....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKL---------VPRK------------------------EFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccC---------CCHH------------------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 8999999886432110 0000 01112345678888865332222 2
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
..++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|++++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998753 3 67777999999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|+++..|+++++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 479
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-33 Score=314.24 Aligned_cols=211 Identities=22% Similarity=0.328 Sum_probs=165.4
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCC-C---cccceEEEEcCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDE-F---VPQRTAAYISQHDNHI 242 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 242 (1433)
+.+|+|+|+.|++||+++|+||||||||||+++|+|..++. ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 46999999999999999999999999999999999998752 0138999999987642 1 1235699999998878
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccC
Q 000541 243 GEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGD 322 (1433)
Q Consensus 243 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 322 (1433)
+ .||+||+.++....+...+ + .....++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK-----K----------------------------VLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch-----H----------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 8999999886532211000 0 00112344566677643211111 2
Q ss_pred cccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEe
Q 000541 323 EMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILI 402 (1433)
Q Consensus 323 ~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 402 (1433)
.....|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 23456999999999999999999999999999999999999999999999753 3 67777899999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000541 403 SDGQIVYQGPREHVL 417 (1433)
Q Consensus 403 ~~G~iv~~G~~~~~~ 417 (1433)
++|+++..|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 218 LMGELVEHDDTQVIF 232 (249)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 480
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=314.69 Aligned_cols=211 Identities=25% Similarity=0.401 Sum_probs=165.9
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPK 914 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 914 (1433)
.++++|+++.++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYD------------EKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecC------------CCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeH
Confidence 477899988763 11358999999999999999999999999999999999987 4689999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000541 915 KQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALV-G-----LPGV 985 (1433)
Q Consensus 915 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~v-g-----~~~~ 985 (1433)
.. ..+++.++|++|+..+++. |++|++.+... ... ...+++.++.+++.+..+.+. | ....
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999877765 99999976421 111 122344455555543332221 0 1124
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCc
Q 000541 986 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGG 1065 (1433)
Q Consensus 986 ~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG 1065 (1433)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|+++ + .+.+|++++|.+ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~-~~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-T-IKNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-H-HhhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999986 5899999999975 3 456999999985 8
Q ss_pred EEEEEcCC
Q 000541 1066 QEIYVGSL 1073 (1433)
Q Consensus 1066 ~~~y~G~~ 1073 (1433)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 99988764
No 481
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.7e-33 Score=316.64 Aligned_cols=210 Identities=28% Similarity=0.415 Sum_probs=161.9
Q ss_pred EEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCCc
Q 000541 837 TFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKKQ 916 (1433)
Q Consensus 837 ~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~ 916 (1433)
+++|+++.++.. +++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 567887766310 12359999999999999999999999999999999999876 468999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccc-------cccCCCCC
Q 000541 917 ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQA-------LVGLPGVS 986 (1433)
Q Consensus 917 ---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~-------~vg~~~~~ 986 (1433)
...++.++|++|++.+++ .||+|++.+....+ ... ..++.++..++.+..+. ... ....
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456999999987775 69999997642111 111 12233333333222111 111 1246
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.+|++++|.+ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999987 7899999999975 33 57999999986 89
Q ss_pred EEEEcCC
Q 000541 1067 EIYVGSL 1073 (1433)
Q Consensus 1067 ~~y~G~~ 1073 (1433)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 9998874
No 482
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-33 Score=329.56 Aligned_cols=213 Identities=23% Similarity=0.353 Sum_probs=178.5
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++++||+++++.+ +.++|+|+|+++++||.+||+|+||||||||+..|+|... +.+|+|.+||.+
T Consensus 335 ~~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~ 401 (573)
T COG4987 335 QALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVE 401 (573)
T ss_pred ceeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcC
Confidence 379999999999632 3469999999999999999999999999999999999877 569999999987
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccc-------cccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQA-------LVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~-------~vg~~ 983 (1433)
+.. ...++.++.++|...+| .-|+++||..+. | +.+ ++.+.++++.+||.+.... .+|+.
T Consensus 402 ~~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~----~-~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~ 471 (573)
T COG4987 402 IASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN----P-DAS----DEELWAALQQVGLEKLLESAPDGLNTWLGEG 471 (573)
T ss_pred hhhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC----C-CCC----HHHHHHHHHHcCHHHHHHhChhhhhchhccC
Confidence 643 33567789999976554 569999997652 1 222 3446778888998776433 45554
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
.+.||||||||++|||+|++|.++++|||||.|||+.|.++|++.|.+-++ |+|+|++||+.. -.+.||+|++|.+
T Consensus 472 -G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~ 547 (573)
T COG4987 472 -GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN 547 (573)
T ss_pred -CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC
Confidence 478999999999999999999999999999999999999999999998764 899999999864 5789999999985
Q ss_pred CcEEEEEcCCC
Q 000541 1064 GGQEIYVGSLG 1074 (1433)
Q Consensus 1064 gG~~~y~G~~~ 1074 (1433)
|+++..|..+
T Consensus 548 -Gkiie~G~~~ 557 (573)
T COG4987 548 -GKIIEEGTHA 557 (573)
T ss_pred -CeeeecCCHH
Confidence 8999999863
No 483
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=303.04 Aligned_cols=196 Identities=26% Similarity=0.409 Sum_probs=171.1
Q ss_pred ceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCCCCCCCCC
Q 000541 174 DVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHDNHIGEMT 246 (1433)
Q Consensus 174 ~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 246 (1433)
++++..+.-.+|+|-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|.+|||+|+-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775799999999999999999999999998 999999998763321 2478999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccC
Q 000541 247 VRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLR 326 (1433)
Q Consensus 247 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 326 (1433)
|+-||.|+.... .....|.+.+.||++|..+... .
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P-----~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYP-----G 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCC-----C
Confidence 999999985311 0012466889999999887655 4
Q ss_pred CCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCCe
Q 000541 327 GISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDGQ 406 (1433)
Q Consensus 327 gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 406 (1433)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.+.. +.-|+.++|...|+.+++|+|++|++||
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~-~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEI-NIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhc-CCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 699999999999999999999999999999999999999999999998755 4667789999999999999999999999
Q ss_pred EEEecChhHHHH
Q 000541 407 IVYQGPREHVLE 418 (1433)
Q Consensus 407 iv~~G~~~~~~~ 418 (1433)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999999864
No 484
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8.5e-33 Score=359.65 Aligned_cols=208 Identities=26% Similarity=0.374 Sum_probs=166.5
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+| +.
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIF-SG 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceeh-hH
Confidence 35899999999999999999999999999999999999998 9999999999876654 46899999998666 56
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|++|||.++.+. +.+.+.+.++....+ .+..+ -.++...||.||+.+
T Consensus 563 TI~eNi~l~~~~------------------------~~~~~~i~~a~~~a~------l~~~i--~~lp~gldt~i~e~G- 609 (708)
T TIGR01193 563 SILENLLLGAKE------------------------NVSQDEIWAACEIAE------IKDDI--ENMPLGYQTELSEEG- 609 (708)
T ss_pred HHHHHHhccCCC------------------------CCCHHHHHHHHHHhC------CHHHH--HhcccccCcEecCCC-
Confidence 999999986310 001111111111000 01111 137788899999865
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
.+||||||||++||||++.+|++++||||||+||+.+...+.+.|++. .+ .|+|.++|..+ +.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~-~T~IiitHr~~-~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QD-KTIIFVAHRLS-VAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cC-CEEEEEecchH-HHHcCCEEEEEECC
Confidence 479999999999999999999999999999999999999999999874 23 45566777765 55789999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
++++.|+++++.+
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 485
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.8e-33 Score=359.68 Aligned_cols=206 Identities=25% Similarity=0.405 Sum_probs=163.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 245 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 245 (1433)
+.+|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+| +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 46899999999999999999999999999999999999998 9999999999876653 46899999998655 57
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCccc
Q 000541 246 TVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEML 325 (1433)
Q Consensus 246 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 325 (1433)
|+||||.++.... + .+++.+..+.+++ +..++ .+++..||.+|+.+
T Consensus 570 TIreNI~~g~~~~---~----~e~i~~al~~a~l------------------------~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLTDT---P----DEEIMAAAKAANA------------------------HDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCCCC---C----HHHHHHHHHHcCC------------------------HHHHH--hCCCccCCcccCCC-
Confidence 9999999863210 0 0111111111110 11111 36778899999865
Q ss_pred CCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEEecCC
Q 000541 326 RGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIILISDG 405 (1433)
Q Consensus 326 ~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 405 (1433)
..||||||||++||||++.+|+|++||||||+||+.+...+.+ ... .+++|+|.++|..+ +.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~----~~~~TvIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS----RASRTVLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc----cCCCeEEEEeccHH-HHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999988887 221 23456666888775 45679999999999
Q ss_pred eEEEecChhHHHH
Q 000541 406 QIVYQGPREHVLE 418 (1433)
Q Consensus 406 ~iv~~G~~~~~~~ 418 (1433)
+|+++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 486
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.3e-33 Score=304.05 Aligned_cols=194 Identities=23% Similarity=0.303 Sum_probs=162.2
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|+++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~ 66 (200)
T PRK13540 2 LDVIELDFDYH-------------DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIK 66 (200)
T ss_pred EEEEEEEEEeC-------------CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccc
Confidence 56788887763 2469999999999999999999999999999999999887 56899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000541 916 Q--ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGLSTEQR 993 (1433)
Q Consensus 916 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~LSgGqr 993 (1433)
. ..+++.++|++|+..+++..||+|++.+.... . .. ...++++++.+++.+..+..+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 133 (200)
T PRK13540 67 KDLCTYQKQLCFVGHRSGINPYLTLRENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPC-----GLLSSGQK 133 (200)
T ss_pred cCHHHHHhheEEeccccccCcCCCHHHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCCh-----hhcCHHHH
Confidence 2 23456799999998888899999999876421 1 11 235788999999877666543 46999999
Q ss_pred HHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhccee
Q 000541 994 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELF 1059 (1433)
Q Consensus 994 kRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ 1059 (1433)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ....+|...
T Consensus 134 ~rv~laral~~~p~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 134 RQVALLRLWMSKAKLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 9999999999999999999999999999999999999998777999999999965 345566443
No 487
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-32 Score=276.21 Aligned_cols=201 Identities=28% Similarity=0.396 Sum_probs=171.5
Q ss_pred ccccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc-------cceEEEEcC
Q 000541 165 RKKHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP-------QRTAAYISQ 237 (1433)
Q Consensus 165 ~~~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 237 (1433)
...+.+||++|++.|++||-++|+|||||||||||-+|+|+..|+ +|+|.+-|+++..+.- .+.+|+|+|
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQ 95 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQ 95 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEE
Confidence 345688999999999999999999999999999999999999998 9999999999865532 267999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccc
Q 000541 238 HDNHIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCAD 317 (1433)
Q Consensus 238 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 317 (1433)
...++|+||-.||+...+.++|-..+. ........|+.+||.+-.+
T Consensus 96 SF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~Rl~ 141 (228)
T COG4181 96 SFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKRLT 141 (228)
T ss_pred eeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCcccccc
Confidence 999999999999999988776532111 0112345789999987765
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
-.. ..|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.. ..++|+|.++|+. ....-||
T Consensus 142 HyP-----~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD~-~LA~Rc~ 214 (228)
T COG4181 142 HYP-----AQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHDP-QLAARCD 214 (228)
T ss_pred cCc-----cccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCCH-HHHHhhh
Confidence 444 46999999999999999999999999999999999999999999998876 4578888888885 5667899
Q ss_pred eEEEecCCeEEE
Q 000541 398 DIILISDGQIVY 409 (1433)
Q Consensus 398 ~vilL~~G~iv~ 409 (1433)
|++-|.+|+++.
T Consensus 215 R~~r~~~G~l~~ 226 (228)
T COG4181 215 RQLRLRSGRLVE 226 (228)
T ss_pred heeeeecceecc
Confidence 999999999874
No 488
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.12 Aligned_cols=211 Identities=20% Similarity=0.263 Sum_probs=166.6
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL--RVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (251)
T PRK14249 17 HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNP 96 (251)
T ss_pred eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCcc
Confidence 459999999999999999999999999999999999998741 1269999999876432 124679999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++. ||+||+.++....+..... +.....+.+++.+||.+..... -
T Consensus 97 ~~~-tv~enl~~~~~~~~~~~~~---------------------------------~~~~~~~~~l~~~~l~~~l~~~-~ 141 (251)
T PRK14249 97 FPK-SIFDNVAFGPRMLGTTAQS---------------------------------RLDEVVEKSLRQAALWDEVKDN-L 141 (251)
T ss_pred CcC-cHHHHHhhHHHhcCCChhh---------------------------------HHHHHHHHHHHHhCCchhhhhH-h
Confidence 875 9999999875432210000 0011234456666664321111 1
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
++....|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+..++.+++|++++
T Consensus 142 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~~tilivsh~~~~~~~~~d~i~~ 218 (251)
T PRK14249 142 HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--Q-NYTIAIVTHNMQQAARASDWTGF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCEEEEEeCCHHHHHhhCCEEEE
Confidence 23445799999999999999999999999999999999999999999999873 2 46777799999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|++++.|+++++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 219 LLTGDLVEYGRTGEIF 234 (251)
T ss_pred EeCCeEEEeCCHHHHH
Confidence 9999999999988764
No 489
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=314.82 Aligned_cols=207 Identities=21% Similarity=0.274 Sum_probs=165.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCC--cceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLR--VSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~--~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+++|+|+|+++++||+++|+|+|||||||||++|+|.++++.. .+|+|.++|+++... ..++.++|++|++..
T Consensus 20 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 99 (259)
T PRK14260 20 SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNP 99 (259)
T ss_pred eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEeccccc
Confidence 4589999999999999999999999999999999999875311 389999999887431 123569999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCC----cccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLD----VCAD 317 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 317 (1433)
++ +||+||+.++.+..+... + .+....++.+++.+|+. +..+
T Consensus 100 ~~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 145 (259)
T PRK14260 100 FP-MSIYENVAYGVRISAKLP---------Q------------------------ADLDEIVESALKGAALWQEVKDKLN 145 (259)
T ss_pred CC-ccHHHHHHHHHHHhcCCC---------H------------------------HHHHHHHHHHHHHcCCcchhhhHhc
Confidence 87 899999988754321000 0 00112234567777774 2233
Q ss_pred ccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcC
Q 000541 318 TMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFD 397 (1433)
Q Consensus 318 t~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 397 (1433)
+ ..+.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ +.+|+.++|+.+++.+++|
T Consensus 146 ~-----~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~---~~tiii~tH~~~~i~~~~d 217 (259)
T PRK14260 146 K-----SALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS---ELTIAIVTHNMQQATRVSD 217 (259)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CCEEEEEeCCHHHHHHhcC
Confidence 3 3457999999999999999999999999999999999999999999998743 3677779999999999999
Q ss_pred eEEEec-----CCeEEEecChhHHH
Q 000541 398 DIILIS-----DGQIVYQGPREHVL 417 (1433)
Q Consensus 398 ~vilL~-----~G~iv~~G~~~~~~ 417 (1433)
++++|+ +|+++++|+++++.
T Consensus 218 ~i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 218 FTAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eEEEEeccCCCCceEEEeCCHHHHh
Confidence 999998 59999999999874
No 490
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=313.14 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=173.7
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCC---eeeeEEEEc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YISGSIMIS 910 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~ 910 (1433)
..++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3588999998873 236999999999999999999999999999999999987532 268999999
Q ss_pred CccCC-------cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcc-cccccccC
Q 000541 911 GYPKK-------QETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNP-LRQALVGL 982 (1433)
Q Consensus 911 G~~~~-------~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~-~~~~~vg~ 982 (1433)
|.+.. ...+++.++|++|++.+++. ||+||+.+...... .. .....++.++++++.+++.+ +.+.+ ..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~-~~-~~~~~~~~~~~~l~~~~l~~~l~~~~-~~ 157 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG-VK-RRSILEERVENALRNAALWDEVKDRL-GD 157 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC-CC-hHHHHHHHHHHHHHHcCCchhhhHHH-hC
Confidence 97642 12345678999999888876 99999987643221 10 11122345677788887742 11111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 983 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 983 ~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
....||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 158 -~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~ 234 (265)
T PRK14252 158 -LAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMY 234 (265)
T ss_pred -CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEE
Confidence 1357999999999999999999999999999999999999999999999875 699999999974 4667899999998
Q ss_pred cCcEEEEEcCC
Q 000541 1063 RGGQEIYVGSL 1073 (1433)
Q Consensus 1063 ~gG~~~y~G~~ 1073 (1433)
+ |+++..|+.
T Consensus 235 ~-G~i~~~g~~ 244 (265)
T PRK14252 235 M-GELIEFGAT 244 (265)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 491
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.4e-32 Score=307.80 Aligned_cols=210 Identities=23% Similarity=0.299 Sum_probs=165.6
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEc--Cc-
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMIS--GY- 912 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~--G~- 912 (1433)
+.++|+++.++.... ...++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYL--PDSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEEecCCCc
Confidence 567888887742100 0012469999999999999999999999999999999999876 458999998 42
Q ss_pred -cCCc---cc---c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-ccccccCC
Q 000541 913 -PKKQ---ET---F-ARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-RQALVGLP 983 (1433)
Q Consensus 913 -~~~~---~~---~-~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-~~~~vg~~ 983 (1433)
+... .. . ++.++|++|+..+++.+||+|++.+..... ........+.++++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3221 11 1 346899999998999999999998764322 12223334567888999998753 3433
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEe
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLK 1062 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~ 1062 (1433)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4579999999999999999999999999999999999999999999999877999999999853 3446789988763
No 492
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=319.68 Aligned_cols=221 Identities=24% Similarity=0.318 Sum_probs=173.5
Q ss_pred eEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCC---CeeeeEEEEcC
Q 000541 835 SITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYISGSIMISG 911 (1433)
Q Consensus 835 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 911 (1433)
.+.++|+++.+. .+.+|+++|+++++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999998773 24699999999999999999999999999999999998642 14689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC---------CCC-hhHHHHHHHHHHHHcCCcccc
Q 000541 912 YPKKQ-----ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPL---------EVD-SPTRKMFIEEVMELVELNPLR 976 (1433)
Q Consensus 912 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~---------~~~-~~~~~~~v~~vl~~l~l~~~~ 976 (1433)
.++.. ...++.++|++|+..+++ .||+||+.+....+... ... ....++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87542 123567999999988777 59999998864322100 011 122345678888888874311
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhc
Q 000541 977 QALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFD 1056 (1433)
Q Consensus 977 ~~~vg~~~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd 1056 (1433)
..... .....||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12467999999999999999999999999999999999999999999999976 489999999975 4667899
Q ss_pred cee-EEecCcEEEEEcCC
Q 000541 1057 ELF-LLKRGGQEIYVGSL 1073 (1433)
Q Consensus 1057 ~~~-ll~~gG~~~y~G~~ 1073 (1433)
+++ +|. +|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 455 5899999985
No 493
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-32 Score=311.52 Aligned_cols=219 Identities=18% Similarity=0.244 Sum_probs=173.7
Q ss_pred eeEEEeceeeEeecCcc----ccC--Ccc-cccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeE
Q 000541 834 HSITFDEIAYSVDMPQE----MMR--PGV-LEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGS 906 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~----~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~ 906 (1433)
+.+.++|++..++.... .+. .+. ....+.+|+|+|++++|||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 35777887655543210 110 001 1244679999999999999999999999999999999999887 46899
Q ss_pred EEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000541 907 IMISGYPKKQETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVS 986 (1433)
Q Consensus 907 I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~ 986 (1433)
|.++|. ++++.|+..+.+.+|+.|++.+..... ....++....++++++.+++.+..+.. +.
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VK 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cc
Confidence 999984 356777776778899999998754332 122334445567788888887766654 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 987 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 987 ~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
.||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++.+.|+|||+++|++. .+.+.+|++++|.+ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999964 45677899999985 89
Q ss_pred EEEEcCCC
Q 000541 1067 EIYVGSLG 1074 (1433)
Q Consensus 1067 ~~y~G~~~ 1074 (1433)
++..|+..
T Consensus 221 i~~~g~~~ 228 (264)
T PRK13546 221 LKDYGELD 228 (264)
T ss_pred EEEeCCHH
Confidence 99998863
No 494
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.59 Aligned_cols=211 Identities=21% Similarity=0.314 Sum_probs=165.9
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCcceEEEECCccCCCC-----cccceEEEEcCCCCC
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSS--LRVSGRVTYNGHDMDEF-----VPQRTAAYISQHDNH 241 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 241 (1433)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 46999999999999999999999999999999999987531 11389999999987542 123569999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCcccccccc
Q 000541 242 IGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVG 321 (1433)
Q Consensus 242 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 321 (1433)
++. ||+||+.|+.+..+... .. .....++.+++.+|+.+...+..
T Consensus 99 ~~~-tv~eni~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~~l~~~l~~~~- 143 (253)
T PRK14261 99 FPK-SIYENVAYGPRIHGEKN---------KK------------------------TLDTIVEKSLKGAALWDEVKDRL- 143 (253)
T ss_pred Ccc-cHHHHHHhhHHhcCCCC---------HH------------------------HHHHHHHHHHHHhcCchhhHHHh-
Confidence 874 99999998754321100 00 01112344667777643211111
Q ss_pred CcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEEE
Q 000541 322 DEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDIIL 401 (1433)
Q Consensus 322 ~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 401 (1433)
+...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+.+++.+.+|++++
T Consensus 144 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~ 220 (253)
T PRK14261 144 HDSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGF 220 (253)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEE
Confidence 233457999999999999999999999999999999999999999999998753 3 5777789999999999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000541 402 ISDGQIVYQGPREHVL 417 (1433)
Q Consensus 402 L~~G~iv~~G~~~~~~ 417 (1433)
|++|+++..|+.+++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 221 MYLGKLIEFDKTTQIF 236 (253)
T ss_pred EECCEEEEcCCHHHHH
Confidence 9999999999988764
No 495
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.2e-33 Score=299.34 Aligned_cols=170 Identities=24% Similarity=0.421 Sum_probs=148.4
Q ss_pred EEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCccCC
Q 000541 836 ITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYPKK 915 (1433)
Q Consensus 836 ~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 915 (1433)
++++|+++.+ +|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~-----------------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (182)
T cd03215 5 LEVRGLSVKG-----------------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVT 65 (182)
T ss_pred EEEeccEEEe-----------------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECC
Confidence 6777777642 7999999999999999999999999999999999987 46899999998764
Q ss_pred cc----cccceEEEeccCC---CCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000541 916 QE----TFARISGYCEQND---IHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPLRQALVGLPGVSGL 988 (1433)
Q Consensus 916 ~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~~~~~vg~~~~~~L 988 (1433)
.. ..++.++|++|+. .+++.+|++||+.+... |
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------------L 105 (182)
T cd03215 66 RRSPRDAIRAGIAYVPEDRKREGLVLDLSVAENIALSSL----------------------------------------L 105 (182)
T ss_pred ccCHHHHHhCCeEEecCCcccCcccCCCcHHHHHHHHhh----------------------------------------c
Confidence 32 2356799999984 57888999999976421 8
Q ss_pred CHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEecCcE
Q 000541 989 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKRGGQ 1066 (1433)
Q Consensus 989 SgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~gG~ 1066 (1433)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |+
T Consensus 106 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 106 SGGNQQKVVLARWLARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred CHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999999999999999999999999999999877899999999974 56777999999986 54
No 496
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.8e-32 Score=311.26 Aligned_cols=201 Identities=26% Similarity=0.403 Sum_probs=168.0
Q ss_pred eeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCcc---cceEEEEcCCCCCCCCCCH
Q 000541 171 ILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTV 247 (1433)
Q Consensus 171 iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 247 (1433)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|+++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999984 3 8999999998765432 2458999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccccCcccCC
Q 000541 248 RETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMVGDEMLRG 327 (1433)
Q Consensus 248 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 327 (1433)
+||+.+..... . ... +....++.+++.+||++..++.++ .
T Consensus 87 ~~nl~~~~~~~-~----------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T----------RTE------------------------AVASALNEVAEALGLDDKLGRSVN-----Q 126 (248)
T ss_pred HHHHHhcCccC-C----------CcH------------------------HHHHHHHHHHHHcCCHhHhcCCcc-----c
Confidence 99998753110 0 000 011234668899999876666554 5
Q ss_pred CchhHhhHHHHHHHHhC-------CCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 328 ISGGQKKRVTTGEMMVG-------PAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 328 LSGGqrqRvsia~aL~~-------~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++.+ .+++|+.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~--~~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ--QGIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999999854 35677779999999999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000541 401 LISDGQIVYQGPREHVL 417 (1433)
Q Consensus 401 lL~~G~iv~~G~~~~~~ 417 (1433)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987753
No 497
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.4e-32 Score=303.84 Aligned_cols=190 Identities=23% Similarity=0.323 Sum_probs=156.2
Q ss_pred cceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCccCCCCc-------ccceEEEEcCCCC
Q 000541 168 HLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHDMDEFV-------PQRTAAYISQHDN 240 (1433)
Q Consensus 168 ~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~ 240 (1433)
++++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 86 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFD---SGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFA 86 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccchhhHHHHHHhCeeEEecchh
Confidence 356999999999999999999999999999999999999987 999999998854211 2357999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCccccccc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDVCADTMV 320 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 320 (1433)
+++.+||+||+.++....+.. .. +....++.+++.+||++..++.+
T Consensus 87 ~~~~~t~~e~~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~~ 132 (206)
T TIGR03608 87 LIENETVEENLDLGLKYKKLS----------KK------------------------EKREKKKEALEKVGLNLKLKQKI 132 (206)
T ss_pred hccCCcHHHHHHHHHHhcCCC----------HH------------------------HHHHHHHHHHHHcCchhhhcCCh
Confidence 889999999999865422110 00 01123466889999987777665
Q ss_pred cCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhcCeEE
Q 000541 321 GDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLFDDII 400 (1433)
Q Consensus 321 g~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 400 (1433)
. .||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.. . +++++.++|+... .+.+|+++
T Consensus 133 ~-----~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~-~~~~d~i~ 204 (206)
T TIGR03608 133 Y-----ELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELND-E-GKTIIIVTHDPEV-AKQADRVI 204 (206)
T ss_pred h-----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH-HhhcCEEE
Confidence 4 5999999999999999999999999999999999999999999999764 2 5566668888765 47899998
Q ss_pred Ee
Q 000541 401 LI 402 (1433)
Q Consensus 401 lL 402 (1433)
+|
T Consensus 205 ~l 206 (206)
T TIGR03608 205 EL 206 (206)
T ss_pred eC
Confidence 75
No 498
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-32 Score=310.84 Aligned_cols=210 Identities=21% Similarity=0.359 Sum_probs=167.3
Q ss_pred ccceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC---CcceEEEECCccCCCCc---ccceEEEEcCCCC
Q 000541 167 KHLTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSL---RVSGRVTYNGHDMDEFV---PQRTAAYISQHDN 240 (1433)
Q Consensus 167 ~~~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~---~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~ 240 (1433)
+.+.+|+|+|+.+++||+++|+||||||||||+++|+|..+|+. .+.|+|.++|+++.... .++.++|++|++.
T Consensus 21 ~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~~ 100 (257)
T PRK14246 21 NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQPN 100 (257)
T ss_pred CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCCc
Confidence 44679999999999999999999999999999999999998761 12355555566554322 2457999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc----cc
Q 000541 241 HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV----CA 316 (1433)
Q Consensus 241 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~ 316 (1433)
+++.+||+||+.++....+... + .+....++.+++.+|+.+ ..
T Consensus 101 ~~~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~~~~~~l~~~~~~~~ 147 (257)
T PRK14246 101 PFPHLSIYDNIAYPLKSHGIKE---------K------------------------REIKKIVEECLRKVGLWKEVYDRL 147 (257)
T ss_pred cCCCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCCccchhhh
Confidence 8899999999998743211100 0 001123456788888863 23
Q ss_pred cccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHHhhc
Q 000541 317 DTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETYDLF 396 (1433)
Q Consensus 317 dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 396 (1433)
+. ..+.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++.+ +.+|+.++|+..++.++|
T Consensus 148 ~~-----~~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~---~~tiilvsh~~~~~~~~~ 219 (257)
T PRK14246 148 NS-----PASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN---EIAIVIVSHNPQQVARVA 219 (257)
T ss_pred cC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc---CcEEEEEECCHHHHHHhC
Confidence 33 3456999999999999999999999999999999999999999999998743 367777899999999999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 000541 397 DDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 397 D~vilL~~G~iv~~G~~~~~~ 417 (1433)
|++++|++|+++.+|+.+++.
T Consensus 220 d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 220 DYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred CEEEEEECCEEEEECCHHHHH
Confidence 999999999999999988765
No 499
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.1e-32 Score=312.17 Aligned_cols=207 Identities=23% Similarity=0.323 Sum_probs=166.8
Q ss_pred ceeeeceEEEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCcceEEEECCcc-----CCCCcc-------cceEEEEc
Q 000541 169 LTILKDVSGIIRPGRMTLLLGPPASGKTTLLLALAGKLDSSLRVSGRVTYNGHD-----MDEFVP-------QRTAAYIS 236 (1433)
Q Consensus 169 ~~iL~~vs~~i~~G~~~~llGp~GSGKSTLL~~L~G~l~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 236 (1433)
..+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 16 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (253)
T TIGR02323 16 GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVH 92 (253)
T ss_pred ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEE
Confidence 45899999999999999999999999999999999999987 9999999976 443221 23589999
Q ss_pred CCCC--CCCCCCHHHHHHHHHHhcCCCcchhhhhhhhHHHHhcCCCCCCChHHHHHHhhhhhhhhhHHHHHHHHHhCCCc
Q 000541 237 QHDN--HIGEMTVRETLAFSARCQGVGSRHEMLSELSRREKAAGIKPDPDIDVFMKAAATEGQEASVVTDYILKILGLDV 314 (1433)
Q Consensus 237 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~ 314 (1433)
|++. ..+.+|+.||+.+......... .. +....++.+++.+|+.+
T Consensus 93 q~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~l~l~~ 139 (253)
T TIGR02323 93 QNPRDGLRMRVSAGANIGERLMAIGARH---------YG------------------------NIRAAAHDWLEEVEIDP 139 (253)
T ss_pred eCcccccCccccHHHHHHHHHHHhcccc---------hH------------------------HHHHHHHHHHHHcCCCh
Confidence 9864 4566799999976422100000 00 01123456889999963
Q ss_pred -cccccccCcccCCCchhHhhHHHHHHHHhCCCcEeEEecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhhHH
Q 000541 315 -CADTMVGDEMLRGISGGQKKRVTTGEMMVGPAQALFMDEISTGLDSSTTFQIVNSLRQSIHILKGTTLISLLQPAPETY 393 (1433)
Q Consensus 315 -~~dt~vg~~~~~gLSGGqrqRvsia~aL~~~p~illlDEPtsgLD~~t~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 393 (1433)
..++.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+. .+.++|+++|+.+++.
T Consensus 140 ~~~~~~~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~vsH~~~~~~ 213 (253)
T TIGR02323 140 TRIDDLP-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRD-LGLAVIIVTHDLGVAR 213 (253)
T ss_pred hhhhcCc-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHH
Confidence 555554 469999999999999999999999999999999999999999999987653 3567777899999999
Q ss_pred hhcCeEEEecCCeEEEecChhHHH
Q 000541 394 DLFDDIILISDGQIVYQGPREHVL 417 (1433)
Q Consensus 394 ~~~D~vilL~~G~iv~~G~~~~~~ 417 (1433)
+++|++++|++|++++.|+.+++.
T Consensus 214 ~~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 214 LLAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred HhcCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999988764
No 500
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.9e-33 Score=360.34 Aligned_cols=212 Identities=27% Similarity=0.442 Sum_probs=177.4
Q ss_pred eeEEEeceeeEeecCccccCCcccccceeeeccceeEEeCCeEEEEeccCCCChHHHHhhhcCCCCCCeeeeEEEEcCcc
Q 000541 834 HSITFDEIAYSVDMPQEMMRPGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYISGSIMISGYP 913 (1433)
Q Consensus 834 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 913 (1433)
..++|+|++|+|+. +++.+|+|+|++++|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 36999999999842 12459999999999999999999999999999999999987 568999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCChhHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000541 914 KKQ---ETFARISGYCEQNDIHSPNVTVYESLLYSAWLRLPLEVDSPTRKMFIEEVMELVELNPL-------RQALVGLP 983 (1433)
Q Consensus 914 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~a~lr~~~~~~~~~~~~~v~~vl~~l~l~~~-------~~~~vg~~ 983 (1433)
+++ ..+++.++||+|++.+++ .|++||+.+.. | +.+ ++.+.++++..++.+. .|+.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 456788999999998876 59999997641 1 122 2335566666665442 35666654
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHHhcceeEEec
Q 000541 984 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIVEAFDELFLLKR 1063 (1433)
Q Consensus 984 ~~~~LSgGqrkRl~ia~~L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~t~Hqp~~~~~~~fd~~~ll~~ 1063 (1433)
+ .+||||||||++|||||+++|+||+||||||+||+.+...|++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 599 G-~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 G-RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 3 5799999999999999999999999999999999999999999999986 4799999999975 5688999999985
Q ss_pred CcEEEEEcCC
Q 000541 1064 GGQEIYVGSL 1073 (1433)
Q Consensus 1064 gG~~~y~G~~ 1073 (1433)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 899999985
Done!