Query 000545
Match_columns 1432
No_of_seqs 215 out of 710
Neff 8.1
Searched_HMMs 13730
Date Tue Mar 26 16:46:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000545.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_319-322//hhsearch_scop/000545hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 97.5 0.0022 1.6E-07 35.4 25.7 58 1110-1183 214-273 (371)
2 d1nexb2 b.69.4.1 (B:370-744) C 96.8 0.011 7.8E-07 30.8 41.3 74 661-776 16-89 (355)
3 d1gxra_ b.69.4.1 (A:) Groucho/ 96.2 0.024 1.7E-06 28.5 34.7 41 973-1020 202-242 (337)
4 d1nr0a2 b.69.4.1 (A:313-611) A 96.2 0.025 1.8E-06 28.4 31.1 22 753-774 26-47 (299)
5 d1pgua1 b.69.4.1 (A:2-326) Act 95.8 0.035 2.5E-06 27.4 26.1 16 753-768 79-94 (325)
6 d1gxra_ b.69.4.1 (A:) Groucho/ 95.6 0.043 3.2E-06 26.8 36.9 28 1240-1269 307-334 (337)
7 d1pgua2 b.69.4.1 (A:327-613) A 95.1 0.062 4.5E-06 25.8 23.3 28 1238-1268 257-284 (287)
8 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 94.6 0.084 6.1E-06 24.9 21.7 18 753-770 109-126 (371)
9 d1nr0a1 b.69.4.1 (A:2-312) Act 93.7 0.12 8.9E-06 23.8 21.4 18 753-770 72-89 (311)
10 d1tbga_ b.69.4.1 (A:) beta1-su 92.8 0.17 1.2E-05 22.9 35.7 25 753-777 69-93 (340)
11 d1erja_ b.69.4.1 (A:) Tup1, C- 92.4 0.19 1.4E-05 22.6 35.4 25 753-778 76-100 (388)
12 d1ri6a_ b.69.11.1 (A:) Putativ 92.3 0.2 1.4E-05 22.5 16.5 71 1126-1200 250-328 (333)
13 d1nr0a2 b.69.4.1 (A:313-611) A 92.2 0.2 1.5E-05 22.4 25.7 144 1109-1270 148-297 (299)
14 d1nr0a1 b.69.4.1 (A:2-312) Act 89.9 0.33 2.4E-05 21.0 32.8 18 838-855 70-87 (311)
15 d1erja_ b.69.4.1 (A:) Tup1, C- 88.9 0.39 2.9E-05 20.5 25.3 59 1108-1182 319-386 (388)
16 d1q7fa_ b.68.9.1 (A:) Brain tu 86.3 0.55 4E-05 19.5 26.9 74 1199-1275 202-276 (279)
17 d1l0qa2 b.69.2.3 (A:1-301) Sur 83.7 0.72 5.2E-05 18.8 32.0 26 994-1020 150-175 (301)
18 d1k32a3 b.69.9.1 (A:320-679) T 69.7 1.8 0.00013 16.2 11.7 50 1125-1185 295-347 (360)
19 d1jmxb_ b.69.2.2 (B:) Quinohem 56.7 3 0.00022 14.6 22.4 19 757-775 58-76 (346)
20 d1yfqa_ b.69.4.2 (A:) Cell cyc 53.5 3.4 0.00025 14.3 23.0 19 753-771 71-89 (342)
21 d2ghsa1 b.68.6.1 (A:20-314) Re 40.7 5.3 0.00039 13.0 18.9 58 1065-1135 221-283 (295)
22 d2ovrb2 b.69.4.1 (B:2365-2706) 37.3 6 0.00044 12.7 40.5 134 1127-1272 196-340 (342)
23 d1sq9a_ b.69.4.1 (A:) Antivira 35.9 6.3 0.00046 12.5 18.1 25 660-684 16-40 (393)
24 d1p22a2 b.69.4.1 (A:253-545) F 22.2 11 0.00079 11.0 24.4 62 1109-1180 228-293 (293)
25 d1jofa_ b.69.10.1 (A:) 3-carbo 20.0 12 0.00088 10.7 23.5 81 1109-1194 266-352 (365)
No 1
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.49 E-value=0.0022 Score=35.40 Aligned_cols=58 Identities=14% Similarity=0.116 Sum_probs=27.1
Q ss_pred EEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEECCC-CCEEEEE-ECCEEEEEECCC
Q ss_conf 1999996100598866660699999764599997438999988614841798444-6809999-689699997238
Q 000545 1110 TLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASL-QGHLLIA-SGPKIILHKWTG 1183 (1432)
Q Consensus 1110 ~~ivVGT~~~~~Ed~~~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~~~-~g~Ll~a-vg~~i~i~~~~~ 1183 (1432)
.+++.|+. .|.|.++++... ..+..+ ....++|++++-. +|.++++ ....+.+|.++.
T Consensus 214 ~~l~s~~~---------d~~i~iwd~~~~-----~~~~~~--~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 214 SRVAWVSH---------DSTVCLADADKK-----MAVATL--ASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp SEEEEEET---------TTEEEEEEGGGT-----TEEEEE--ECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCCCCCCC---------CCCCEEEEEECC-----CCEEEE--ECCCCCCEEEEECCCCCEEEEECCCCEEEEEEEC
T ss_conf 21000014---------786058864101-----210000--0146652036546999799998199267877608
No 2
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.011 Score=30.81 Aligned_cols=74 Identities=16% Similarity=0.239 Sum_probs=44.9
Q ss_pred EEEEEEECCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999808789999928929999951897369852483213788755787761148998522344565444577543346
Q 000545 661 VLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTPAAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAID 740 (1432)
Q Consensus 661 Iv~asi~d~~vll~~~~g~i~~l~~~~~~~~l~~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1432)
|.+.+..+.+++..-.||.|.++..........+.. -...|.++++..+
T Consensus 16 itc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~------H~~~V~~l~~s~~------------------------- 64 (355)
T d1nexb2 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG------HDGGVWALKYAHG------------------------- 64 (355)
T ss_dssp EEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEEC------CSSCEEEEEEETT-------------------------
T ss_pred EEEEEECCCEEEEEECCCEEEEEECCCCCEEEEEEC------CCCCEEEEEECCC-------------------------
T ss_conf 999998899999991899099998999939999978------9998899998699-------------------------
Q ss_pred CCCCCCCCCCCEEEEEEECCCEEEEEECCCCCEEEE
Q ss_conf 999999987859999994198599998899805688
Q 000545 741 GADGGPLDQGDIYSVVCYESGALEIFDVPNFNCVFT 776 (1432)
Q Consensus 741 ~~~~~~~~~~~~~l~v~~~~g~l~I~sLp~~~~v~~ 776 (1432)
. +++.+..||.+.++.+...+....
T Consensus 65 ----------~-~l~s~s~D~~i~iw~~~~~~~~~~ 89 (355)
T d1nexb2 65 ----------G-ILVSGSTDRTVRVWDIKKGCCTHV 89 (355)
T ss_dssp ----------T-EEEEEETTCCEEEEETTTTEEEEE
T ss_pred ----------C-EEEEEECCCCCCCCCCCCCCCCCC
T ss_conf ----------9-999996452443211111111111
No 3
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.20 E-value=0.024 Score=28.54 Aligned_cols=41 Identities=10% Similarity=0.145 Sum_probs=18.6
Q ss_pred EECCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEE
Q ss_conf 945918999839998568874158996079711389993788969999
Q 000545 973 TSQGILKICQLPSGSTYDNYWPVQKVIPLKATPHQITYFAEKNLYPLI 1020 (1432)
Q Consensus 973 ~s~~~L~I~~l~~~~~~d~~~~ir~~i~L~~tpr~I~y~~~~~~~~v~ 1020 (1432)
..++.+++..+... -.++. ......+..+++++..+.++++
T Consensus 202 ~~d~~v~i~d~~~~------~~~~~-~~~~~~i~~l~~~~~~~~l~~~ 242 (337)
T d1gxra_ 202 GLDNTVRSWDLREG------RQLQQ-HDFTSQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp ETTSEEEEEETTTT------EEEEE-EECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCCCCCCCC------EEECC-CCCCCCEEEEEECCCCCCCCEE
T ss_conf 56655321111110------00002-4666615799971530300000
No 4
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.16 E-value=0.025 Score=28.40 Aligned_cols=22 Identities=9% Similarity=0.046 Sum_probs=16.8
Q ss_pred EEEEEECCCEEEEEECCCCCEE
Q ss_conf 9999941985999988998056
Q 000545 753 YSVVCYESGALEIFDVPNFNCV 774 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~~~~v 774 (1432)
+++.+..||.+++|.+...+++
T Consensus 26 ~l~s~s~Dg~v~vWd~~~~~~~ 47 (299)
T d1nr0a2 26 TLFSADAEGHINSWDISTGISN 47 (299)
T ss_dssp EEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCCCEE
T ss_conf 9999908992999999999688
No 5
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.83 E-value=0.035 Score=27.44 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=7.7
Q ss_pred EEEEEECCCEEEEEEC
Q ss_conf 9999941985999988
Q 000545 753 YSVVCYESGALEIFDV 768 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sL 768 (1432)
+++.+..||+++||.+
T Consensus 79 ~lasgs~Dg~i~iWd~ 94 (325)
T d1pgua1 79 YLCSGDESGKVIVWGW 94 (325)
T ss_dssp EEEEEETTSEEEEEEE
T ss_pred EEEEEECCCCEEEEEE
T ss_conf 9999948997798540
No 6
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57 E-value=0.043 Score=26.80 Aligned_cols=28 Identities=11% Similarity=0.294 Sum_probs=13.7
Q ss_pred CCEEEEEEEECCCEEEEEEEECCCCEEEEE
Q ss_conf 218988998709916999981688599996
Q 000545 1240 LDCFATEFLIDGSTLSLVVSDEQKNIQIFY 1269 (1432)
Q Consensus 1240 ~~vta~~fl~d~~~l~~i~~D~~gNl~vl~ 1269 (1432)
..++++.|-.|++. ++.+..+|.|.+++
T Consensus 307 ~~v~~~~~s~d~~~--l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 307 SSVLSCDISVDDKY--IVTGSGDKKATVYE 334 (337)
T ss_dssp SCEEEEEECTTSCE--EEEEETTSCEEEEE
T ss_pred CCEEEEEEECCCCE--EEEEECCCEEEEEE
T ss_conf 98799999279999--99990899699997
No 7
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.09 E-value=0.062 Score=25.80 Aligned_cols=28 Identities=21% Similarity=0.066 Sum_probs=11.9
Q ss_pred CCCCEEEEEEEECCCEEEEEEEECCCCEEEE
Q ss_conf 8821898899870991699998168859999
Q 000545 1238 GSLDCFATEFLIDGSTLSLVVSDEQKNIQIF 1268 (1432)
Q Consensus 1238 ~~~~vta~~fl~d~~~l~~i~~D~~gNl~vl 1268 (1432)
+...|+++.|. ++++ ++.+..+|.+.+.
T Consensus 257 h~~~V~~v~~~-~~~~--l~s~g~D~~v~iW 284 (287)
T d1pgua2 257 HKDGVNNLLWE-TPST--LVSSGADACIKRW 284 (287)
T ss_dssp STTCEEEEEEE-ETTE--EEEEETTSCEEEE
T ss_pred CCCCEEEEEEC-CCCE--EEEEECCCEEEEE
T ss_conf 78985899998-9998--9999799929999
No 8
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.55 E-value=0.084 Score=24.91 Aligned_cols=18 Identities=17% Similarity=-0.018 Sum_probs=9.6
Q ss_pred EEEEEECCCEEEEEECCC
Q ss_conf 999994198599998899
Q 000545 753 YSVVCYESGALEIFDVPN 770 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~ 770 (1432)
+++++..++.++++.+..
T Consensus 109 ~l~~~s~d~~i~i~~~~~ 126 (371)
T d1k8kc_ 109 KFAVGSGSRVISICYFEQ 126 (371)
T ss_dssp EEEEEETTSSEEEEEEET
T ss_pred CCEEECCCCCCEEEEEEC
T ss_conf 100000257630254420
No 9
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.73 E-value=0.12 Score=23.85 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=8.0
Q ss_pred EEEEEECCCEEEEEECCC
Q ss_conf 999994198599998899
Q 000545 753 YSVVCYESGALEIFDVPN 770 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~ 770 (1432)
+++.+..||.++||.+..
T Consensus 72 ~latg~~dg~i~iwd~~~ 89 (311)
T d1nr0a1 72 YCASGDVHGNVRIWDTTQ 89 (311)
T ss_dssp EEEEEETTSEEEEEESSS
T ss_pred EEECCCCCCEEEEEEEEC
T ss_conf 672255673674663101
No 10
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=92.75 E-value=0.17 Score=22.87 Aligned_cols=25 Identities=28% Similarity=0.309 Sum_probs=18.4
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf 9999941985999988998056884
Q 000545 753 YSVVCYESGALEIFDVPNFNCVFTV 777 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~~~~v~~~ 777 (1432)
+++.+..||.+.||.+...+.+...
T Consensus 69 ~l~sgs~Dg~v~iWd~~~~~~~~~~ 93 (340)
T d1tbga_ 69 LLVSASQDGKLIIWDSYTTNKVHAI 93 (340)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCEEEEECCCCEEEEEE
T ss_conf 9999978995556310210257997
No 11
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.38 E-value=0.19 Score=22.56 Aligned_cols=25 Identities=12% Similarity=0.207 Sum_probs=17.3
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEEC
Q ss_conf 99999419859999889980568842
Q 000545 753 YSVVCYESGALEIFDVPNFNCVFTVD 778 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~~~~v~~~~ 778 (1432)
+++.+. |+.++||.+.+.+++....
T Consensus 76 ~lasg~-d~~i~iW~~~~~~~~~~~~ 100 (388)
T d1erja_ 76 YLATGC-NKTTQVYRVSDGSLVARLS 100 (388)
T ss_dssp EEEEEC-BSCEEEEETTTCCEEEEEC
T ss_pred EEEEEE-CCEEEEEEECCCCEEEEEC
T ss_conf 999994-9948999813640576631
No 12
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=92.29 E-value=0.2 Score=22.49 Aligned_cols=71 Identities=17% Similarity=0.272 Sum_probs=37.4
Q ss_pred CCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEEC-CCCCE-EEEEE--CCEEEEEECCC--CEEEEEEEECC--CCE
Q ss_conf 6606999997645999974389999886148417984-44680-99996--89699997238--81445785059--983
Q 000545 1126 ARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALA-SLQGH-LLIAS--GPKIILHKWTG--TELNGIAFYDA--PPL 1197 (1432)
Q Consensus 1126 ~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~-~~~g~-Ll~av--g~~i~i~~~~~--~~L~~~a~~~~--~~~ 1197 (1432)
..+.+.+|.+.... ..++........+.+..++ .=+|+ |+++- ++.|.+|+++. .+|.+++.+.. .|.
T Consensus 250 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~g~~p~ 325 (333)
T d1ri6a_ 250 TASLITVFSVSEDG----SVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPM 325 (333)
T ss_dssp TTTEEEEEEECTTS----CCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCC
T ss_pred CCCEEEEEEECCCC----CEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCC
T ss_conf 68827878873999----78999999678997628999079899999988999399999979999689998334799985
Q ss_pred EEE
Q ss_conf 699
Q 000545 1198 YVV 1200 (1432)
Q Consensus 1198 ~i~ 1200 (1432)
+|+
T Consensus 326 ~v~ 328 (333)
T d1ri6a_ 326 WVV 328 (333)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 999
No 13
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=92.15 E-value=0.2 Score=22.38 Aligned_cols=144 Identities=14% Similarity=0.194 Sum_probs=66.3
Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEECCC-CC-EEEEEE-CCEEEEEECCCCE
Q ss_conf 21999996100598866660699999764599997438999988614841798444-68-099996-8969999723881
Q 000545 1109 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASL-QG-HLLIAS-GPKIILHKWTGTE 1185 (1432)
Q Consensus 1109 ~~~ivVGT~~~~~Ed~~~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~~~-~g-~Ll~av-g~~i~i~~~~~~~ 1185 (1432)
..++++|+ ..|.+.+|++... ++..+.....+++|++++-- ++ +|+++- ..++.+|++....
T Consensus 148 ~~~l~~g~---------~dg~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~ 212 (299)
T d1nr0a2 148 KQFVAVGG---------QDSKVHVYKLSGA------SVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF 212 (299)
T ss_dssp SCEEEEEE---------TTSEEEEEEEETT------EEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred CCCCCCCC---------CCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11111111---------1111111111111------11111111111111111111111111111111111111111111
Q ss_pred -EEEEEEECCCCEEEEEEEE--ECCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEEECC
Q ss_conf -4457850599836999988--6899999863553999999611577999650368821898899870991699998168
Q 000545 1186 -LNGIAFYDAPPLYVVSLNI--VKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQ 1262 (1432)
Q Consensus 1186 -L~~~a~~~~~~~~i~sl~~--~~n~IlvgD~~~Sv~l~~~~~~~~~l~~~arD~~~~~vta~~fl~d~~~l~~i~~D~~ 1262 (1432)
+.....+......|.++.. .+++++.|..-..+.++..+.................+.++.+ .++.. ++.+-.+
T Consensus 213 ~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--l~s~s~D 289 (299)
T d1nr0a2 213 ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETT--IVSAGQD 289 (299)
T ss_dssp EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTE--EEEEETT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEE-CCCCE--EEEEECC
T ss_conf 11111111111111111124666451388828997999989999731489834898896899997-79899--9999289
Q ss_pred CCEEEEEE
Q ss_conf 85999961
Q 000545 1263 KNIQIFYY 1270 (1432)
Q Consensus 1263 gNl~vl~~ 1270 (1432)
|+|.+...
T Consensus 290 ~~i~iWdl 297 (299)
T d1nr0a2 290 SNIKFWNV 297 (299)
T ss_dssp SCEEEEEC
T ss_pred CEEEEEEC
T ss_conf 97999944
No 14
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=89.92 E-value=0.33 Score=21.00 Aligned_cols=18 Identities=6% Similarity=0.052 Sum_probs=11.4
Q ss_pred CCEEEEEEECCEEEEEEE
Q ss_conf 409999960995999997
Q 000545 838 RPFLFAILTDGTILCYQA 855 (1432)
Q Consensus 838 ~~~L~vgl~~G~l~~y~~ 855 (1432)
..||..|-.||.+.+|.+
T Consensus 70 g~~latg~~dg~i~iwd~ 87 (311)
T d1nr0a1 70 GYYCASGDVHGNVRIWDT 87 (311)
T ss_dssp SSEEEEEETTSEEEEEES
T ss_pred CCEEECCCCCCEEEEEEE
T ss_conf 996722556736746631
No 15
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.87 E-value=0.39 Score=20.50 Aligned_cols=59 Identities=14% Similarity=0.244 Sum_probs=32.8
Q ss_pred CCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEECCC-------CCEEEEEE--CCEEEE
Q ss_conf 621999996100598866660699999764599997438999988614841798444-------68099996--896999
Q 000545 1108 NETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASL-------QGHLLIAS--GPKIIL 1178 (1432)
Q Consensus 1108 ~~~~ivVGT~~~~~Ed~~~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~~~-------~g~Ll~av--g~~i~i 1178 (1432)
...+|+.|+ ..|.|++|++... ..+..+ ....++|++++.. +|.++++. ..+|.+
T Consensus 319 ~~~~l~sg~---------~dg~i~vwd~~~~-----~~~~~l--~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~i 382 (388)
T d1erja_ 319 NDEYILSGS---------KDRGVLFWDKKSG-----NPLLML--QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382 (388)
T ss_dssp GGCEEEEEE---------TTSEEEEEETTTC-----CEEEEE--ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEE
T ss_pred CCCEEEEEE---------CCCEEEEEECCCC-----CEEEEE--ECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEE
T ss_conf 999999996---------9897999999999-----699999--688997899998467425899999999918997999
Q ss_pred EECC
Q ss_conf 9723
Q 000545 1179 HKWT 1182 (1432)
Q Consensus 1179 ~~~~ 1182 (1432)
|+++
T Consensus 383 W~~~ 386 (388)
T d1erja_ 383 WKYK 386 (388)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 7621
No 16
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=86.26 E-value=0.55 Score=19.50 Aligned_cols=74 Identities=18% Similarity=0.411 Sum_probs=39.2
Q ss_pred EEEEEEE-CCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEEEEEECCCEEEEEEEECCCCEEEEEECCCCC
Q ss_conf 9999886-8999998635539999996115779996503688218988998709916999981688599996189988
Q 000545 1199 VVSLNIV-KNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFGSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMS 1275 (1432)
Q Consensus 1199 i~sl~~~-~n~IlvgD~~~Sv~l~~~~~~~~~l~~~arD~~~~~vta~~fl~d~~~l~~i~~D~~gNl~vl~~~p~~~ 1275 (1432)
...|.+. ...|+|+|....-.+..|+.+..-+..++..........+.+ ..+.. ++++|....+.+|+|.+.+|
T Consensus 202 P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~~vav-~~dG~--l~V~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 202 PIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVAL-MDDGS--VVLASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEE-ETTTE--EEEEETTTEEEEEECSCCCC
T ss_pred CCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEE-ECCCC--EEEEECCCEEEEEEEEEECC
T ss_conf 76232314786999978998089999999999999968888898837999-08991--99991899699987220357
No 17
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=83.74 E-value=0.72 Score=18.76 Aligned_cols=26 Identities=8% Similarity=0.166 Sum_probs=12.9
Q ss_pred CEEEEEECCCCCCEEEEECCCCEEEEE
Q ss_conf 158996079711389993788969999
Q 000545 994 PVQKVIPLKATPHQITYFAEKNLYPLI 1020 (1432)
Q Consensus 994 ~ir~~i~L~~tpr~I~y~~~~~~~~v~ 1020 (1432)
.++. ++....|+.++++++.+.+++.
T Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~ 175 (301)
T d1l0qa2 150 VINT-VSVGRSPKGIAVTPDGTKVYVA 175 (301)
T ss_dssp EEEE-EECCSSEEEEEECTTSSEEEEE
T ss_pred EEEE-CCCCCCCEEEEEECCCCCEEEE
T ss_conf 0353-1567884288860465401310
No 18
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=69.72 E-value=1.8 Score=16.17 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=25.8
Q ss_pred CCCEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEECC-CCC-EEEEEEC-CEEEEEECCCCE
Q ss_conf 666069999976459999743899998861484179844-468-0999968-969999723881
Q 000545 1125 AARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALAS-LQG-HLLIASG-PKIILHKWTGTE 1185 (1432)
Q Consensus 1125 ~~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~~-~~g-~Ll~avg-~~i~i~~~~~~~ 1185 (1432)
...|.|+++++.. .++.. +.+.|.+++- -+| +|+.+.. .+|++|+++.++
T Consensus 295 ~~~~~i~~~d~~~------~~~~~-----~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~ 347 (360)
T d1k32a3 295 PEKGVLLKYDVKT------RKVTE-----VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347 (360)
T ss_dssp CCCEEEEEEETTT------CCEEE-----EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTT
T ss_pred CCCCEEEEEECCC------CEEEE-----ECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCC
T ss_conf 8998799997999------74988-----64886879999989899999789949999999998
No 19
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=56.75 E-value=3 Score=14.63 Aligned_cols=19 Identities=16% Similarity=0.172 Sum_probs=8.2
Q ss_pred EECCCEEEEEECCCCCEEE
Q ss_conf 9419859999889980568
Q 000545 757 CYESGALEIFDVPNFNCVF 775 (1432)
Q Consensus 757 ~~~~g~l~I~sLp~~~~v~ 775 (1432)
+..++.+.+|.+...+.+.
T Consensus 58 ~~~~~~v~~~d~~t~~~~~ 76 (346)
T d1jmxb_ 58 NNHYGDIYGIDLDTCKNTF 76 (346)
T ss_dssp ETTTTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEECCCCEEEE
T ss_conf 7899939999675671312
No 20
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.54 E-value=3.4 Score=14.29 Aligned_cols=19 Identities=16% Similarity=-0.010 Sum_probs=9.8
Q ss_pred EEEEEECCCEEEEEECCCC
Q ss_conf 9999941985999988998
Q 000545 753 YSVVCYESGALEIFDVPNF 771 (1432)
Q Consensus 753 ~l~v~~~~g~l~I~sLp~~ 771 (1432)
+++.+..||.+.++.+...
T Consensus 71 ~l~sg~~d~~v~~w~~~~~ 89 (342)
T d1yfqa_ 71 QIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp EEEEEETTSCEEEECSSSS
T ss_pred EEEECCCCCCEEEEECCCC
T ss_conf 8998126531145420443
No 21
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=40.72 E-value=5.3 Score=13.01 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=31.2
Q ss_pred EEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC-----CCCCCCEEEEEEEE
Q ss_conf 999961699999944666677899983679999996425888762199999610059-----88666606999997
Q 000545 1065 EVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQG-----EDVAARGRVLLFST 1135 (1432)
Q Consensus 1065 ~i~l~d~~~~~~~~~~i~~~~l~~~E~v~si~~v~l~~~~~~~~~~~ivVGT~~~~~-----Ed~~~~Gri~vf~i 1135 (1432)
.|..++|. + +.+..++++ .+.++|++ |. +.+..-|.|-|+.... ...|..|+|+.++.
T Consensus 221 ~V~~~dp~---G--~~~~~i~lP-~~~~T~~~---FG----G~d~~~LyvTta~~~~~~~~~~~~p~~G~l~~~~~ 283 (295)
T d2ghsa1 221 AVDRYDTD---G--NHIARYEVP-GKQTTCPA---FI----GPDASRLLVTSAREHLDDDAITANPQHGLTFELGI 283 (295)
T ss_dssp EEEEECTT---C--CEEEEEECS-CSBEEEEE---EE----STTSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSS
T ss_pred CEEEECCC---C--CEEEEECCC-CCCEEEEE---EE----CCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEECC
T ss_conf 46885699---9--286686389-98527989---82----89999999997874799568405889853999769
No 22
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.30 E-value=6 Score=12.66 Aligned_cols=134 Identities=7% Similarity=0.057 Sum_probs=59.7
Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEEECCCEEEECCCCCEEEEEEC-CEEEEEECCCCEEEEEE--EECCCCEEEEEEE
Q ss_conf 60699999764599997438999988614841798444680999968-96999972388144578--5059983699998
Q 000545 1127 RGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASG-PKIILHKWTGTELNGIA--FYDAPPLYVVSLN 1203 (1432)
Q Consensus 1127 ~Gri~vf~i~~~~~~~~~~lk~i~~~~~~G~V~al~~~~g~Ll~avg-~~i~i~~~~~~~L~~~a--~~~~~~~~i~sl~ 1203 (1432)
.|.|+++++... ..++.. ....+.|.++..-.++|+++.. .+|++|++...+....- .... ...+..+.
T Consensus 196 dg~i~~~d~~~~-----~~~~~~--~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~ 267 (342)
T d2ovrb2 196 DTSIRVWDVETG-----NCIHTL--TGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQ 267 (342)
T ss_dssp TSCEEEEETTTC-----CEEEEE--CCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC-SSCEEEEE
T ss_pred CCEEEEEECCCC-----EEEEEE--CCCCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEE-EECEEECC
T ss_conf 993999525565-----365674--1665320577068999999748988999865544221112210001-10100001
Q ss_pred EECCEEEEEECCCCEEEEEEECCCCEEE-EEEE---CCCCCCEEEEEEEECCCEEEEEEEECCCC----EEEEEECC
Q ss_conf 8689999986355399999961157799-9650---36882189889987099169999816885----99996189
Q 000545 1204 IVKNFILLGDIHKSIYFLSWKEQGAQLN-LLAK---DFGSLDCFATEFLIDGSTLSLVVSDEQKN----IQIFYYAP 1272 (1432)
Q Consensus 1204 ~~~n~IlvgD~~~Sv~l~~~~~~~~~l~-~~ar---D~~~~~vta~~fl~d~~~l~~i~~D~~gN----l~vl~~~p 1272 (1432)
..+++++.|..-..|.+. +.+.++++ .+.. ..+...|+++.|- .+.. .++++..+|. |+++.++.
T Consensus 268 ~~~~~~~s~s~Dg~i~iw--d~~tg~~i~~~~~~~~~~~~~~v~~v~~s-~~~~-~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 268 FNKNFVITSSDDGTVKLW--DLKTGEFIRNLVTLESGGSGGVVWRIRAS-NTKL-VCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp ECSSEEEEEETTSEEEEE--ETTTCCEEEEEEECTTGGGTCEEEEEEEC-SSEE-EEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCEEEEECCCCEEEEE--ECCCCCEEEEEECCCCCCCCCCEEEEEEC-CCCC-EEEEEECCCCCEEEEEEEECCC
T ss_conf 379844999089989999--99999798998623478988978999987-9998-9999968999704899993899
No 23
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=35.89 E-value=6.3 Score=12.52 Aligned_cols=25 Identities=20% Similarity=0.403 Sum_probs=13.3
Q ss_pred CEEEEEEECCEEEEEEECCCEEEEE
Q ss_conf 4999998087899999289299999
Q 000545 660 TVLSVSIADPYVLLGMSDGSIRLLV 684 (1432)
Q Consensus 660 ~Iv~asi~d~~vll~~~~g~i~~l~ 684 (1432)
.|.+.++.+.+++-+-.|+.|.+..
T Consensus 16 ~I~~v~~~~~~l~S~S~D~~iriWd 40 (393)
T d1sq9a_ 16 DIFSVSACNSFTVSCSGDGYLKVWD 40 (393)
T ss_dssp CEEEEEECSSEEEEEETTSEEEEEE
T ss_pred CCEEEEEECCEEEEEECCCEEEEEE
T ss_conf 1279999699999997999699878
No 24
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.16 E-value=11 Score=10.96 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=33.5
Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEEEECCC--CCCCCEEEEEEEEECCCEEEECCCCCEEEEEEC--CEEEEEE
Q ss_conf 21999996100598866660699999764599--997438999988614841798444680999968--9699997
Q 000545 1109 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNAD--NPQNLVTEVYSKELKGAISALASLQGHLLIASG--PKIILHK 1180 (1432)
Q Consensus 1109 ~~~ivVGT~~~~~Ed~~~~Gri~vf~i~~~~~--~~~~~lk~i~~~~~~G~V~al~~~~g~Ll~avg--~~i~i~~ 1180 (1432)
..+|+.|. ..|.|+++++..... ........-.-....++|++++ +++..+++.+ .+|++|+
T Consensus 228 ~~~l~sg~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~-~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 228 NKRIVSGA---------YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ-FDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp SSEEEEEE---------TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE-ECSSCEEECCSSSEEEEEC
T ss_pred CEEEEEEC---------CCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEE-ECCCEEEEEECCCEEEEEC
T ss_conf 10799986---------799799998888864445677545578458899889999-7199999992299899959
No 25
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=20.04 E-value=12 Score=10.68 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=45.8
Q ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEC-CCEEEEC--CCCCE-EEEEE--CCEEEEEECC
Q ss_conf 21999996100598866660699999764599997438999988614-8417984--44680-99996--8969999723
Q 000545 1109 ETLLAIGTAYVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELK-GAISALA--SLQGH-LLIAS--GPKIILHKWT 1182 (1432)
Q Consensus 1109 ~~~ivVGT~~~~~Ed~~~~Gri~vf~i~~~~~~~~~~lk~i~~~~~~-G~V~al~--~~~g~-Ll~av--g~~i~i~~~~ 1182 (1432)
-.|+.|. +++.+....+.|-.|++..... -.+...+...... +-+.++. .-.|+ |+++- .+.|.+|+++
T Consensus 266 G~~lyvs---nr~~~~~~~~~i~~~~~~~~g~--~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 266 GKYMFAS---SRANKFELQGYIAGFKLRDCGS--IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp SSEEEEE---EEESSTTSCCEEEEEEECTTSC--EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCEEEEE---CCCCCCCCCEEEEEEEECCCCC--EEEEEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEE
T ss_conf 9978997---1357875422799998568871--4467676677767998647896489999999996799949999982
Q ss_pred CCEEEEEEEECC
Q ss_conf 881445785059
Q 000545 1183 GTELNGIAFYDA 1194 (1432)
Q Consensus 1183 ~~~L~~~a~~~~ 1194 (1432)
.+.+..++..+.
T Consensus 341 ~~~l~~~~~~~v 352 (365)
T d1jofa_ 341 DEFLHRVARVRI 352 (365)
T ss_dssp TTEEEEEEEEEC
T ss_pred CCCCCEEEEEEC
T ss_conf 886727899988
Done!