BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000550
(1431 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 427 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 486
KFTW I FTRL RK S F +G R++++P+G + HLS++L+V
Sbjct: 55 KFTWTIPMFTRLN----TRKHY-----SDVFVVGGYKWRILIFPKGNNV--DHLSMYLDV 103
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
D+ N WS + L+VVNQ S+ KE+Q++++ DWG+ F+ L+ L++
Sbjct: 104 ADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPT 163
Query: 547 SGFLVQDTVVFSAEVLILK 565
G+LV DTV+ AEV + K
Sbjct: 164 RGYLVNDTVLIEAEVAVRK 182
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 97 WTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKW 156
WT+ F R+ R +S F VGGY R+L++PKG++ ++S+YL + D W
Sbjct: 58 WTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPYG-W 113
Query: 157 DCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAV 216
++ + LA+VN + +I +++ H+F++++ G+ F P S +++ GYL ND V
Sbjct: 114 SRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLV-NDTV 172
Query: 217 LITADILI 224
LI A++ +
Sbjct: 173 LIEAEVAV 180
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 595 SFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQSVGSD 651
FTW + F + TRK +S F GG + RI ++ + D + +YL+ +
Sbjct: 55 KFTWTIPMFTR----LNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLP 110
Query: 652 LDKNFWVRYRMAVVNQKNPTKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLMRD 709
+ + ++ +AVVNQ N ++ KE+ + + FM +S++ E G+L+ D
Sbjct: 111 YGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVND 170
Query: 710 TVVFVCEI 717
TV+ E+
Sbjct: 171 TVLIEAEV 178
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 245 SSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGQ 304
+++V P D S KFTW + F+ + T+K S VF G RI ++ N
Sbjct: 40 ATAVENPPPEDPPSLKFTWTIPMFT----RLNTRKHYSDVFVVGGYKWRILIFPKG-NNV 94
Query: 305 EYLSMCLESKDMEKTVVSDRSCWCLFRMSVLNQSPGSNHMHRDSYGRFAADNKSGDNTSL 364
++LSM L+ D + S + F ++V+NQ + +++ +F A +
Sbjct: 95 DHLSMYLDVADA-ANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARE-----SDW 148
Query: 365 GWNDYMKMADFVGHDSGFLVDDTAVFSTSFHVIKEISSFS----KNGGLIGWRS 414
G+ +M +++ G+LV+DT + V K + +S K G +G ++
Sbjct: 149 GFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRKVLDYWSYDSKKETGFVGLKN 202
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 11/139 (7%)
Query: 427 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 486
KFTW I NF+R RK S F +G R++++P+G + HLS++L+V
Sbjct: 56 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNNVD--HLSMYLDV 104
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
D+ + WS + L+VVNQ +V KE+Q++++ DWG+ F+ L+ L+D
Sbjct: 105 SDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPS 164
Query: 547 SGFLVQDTVVFSAEVLILK 565
G+LV DTV+ AEV + K
Sbjct: 165 RGYLVNDTVLVEAEVAVRK 183
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 97 WTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKW 156
WT+ NF R R +S F VGGY R+L++PKG++ ++S+YL + D + W
Sbjct: 59 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDA-ASLPYGW 114
Query: 157 DCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAV 216
+A + LA+VN T+ +++ H+F++++ G+ F P S ++D GYL ND V
Sbjct: 115 SRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLV-NDTV 173
Query: 217 LITADILI 224
L+ A++ +
Sbjct: 174 LVEAEVAV 181
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 15/182 (8%)
Query: 237 ELQSPSMVSSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISV 296
E+ P +S+V P D + KFTW + NFS T+K S VF G RI +
Sbjct: 33 EVTQPETAASTVENQPAEDPPTLKFTWTIPNFS----RQNTRKHYSDVFVVGGYKWRILI 88
Query: 297 YQSSVNGQEYLSMCLESKDMEKTVVSDRSCWCLFRMSVLNQSPGSNHMHRDSYGRFAADN 356
+ N ++LSM L+ D ++ S + F ++V+NQ + +++ +F A
Sbjct: 89 FPKG-NNVDHLSMYLDVSDA-ASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNA-- 144
Query: 357 KSGDNTSLGWNDYMKMADFVGHDSGFLVDDTAVFSTSFHVIKEISSFS----KNGGLIGW 412
+ G+ +M +++ G+LV+DT + V K + +S K G +G
Sbjct: 145 ---RESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRKVLDYWSYDSKKETGFVGL 201
Query: 413 RS 414
++
Sbjct: 202 KN 203
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Query: 595 SFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVY---ESFDTICIYLESDQSVGSD 651
FTW + NF TRK +S F GG + RI ++ + D + +YL+ +
Sbjct: 56 KFTWTIPNFSR----QNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLP 111
Query: 652 LDKNFWVRYRMAVVNQKNPTKTVWKESS--ICTKTWNNSVLQFMKVSDMLEADAGFLMRD 709
+ + ++ +AVVNQ + TV KE+ + + FM +S++ + G+L+ D
Sbjct: 112 YGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVND 171
Query: 710 TVVFVCEI 717
TV+ E+
Sbjct: 172 TVLVEAEV 179
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 425 MGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPC----HL 480
GK TW IE F+ + KR++ G F++G +++YP+G C HL
Sbjct: 68 FGKNTWTIEKFSDIN----KRELRGDV-----FEVGGYKWYILIYPQG-----CDVCNHL 113
Query: 481 SVFLEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLT 540
S+FL V WS F ++V N K +KS ++ +R+ K DWGW++F+ L
Sbjct: 114 SLFLCVAHHEKLLPGWSHFAQFTIAVSN-KDPKKSKHSDTLHRFWKKEHDWGWKKFIELP 172
Query: 541 SL---FDQDSGFLVQDTVVFSAEVLILKE 566
L F DSG L A+V +++E
Sbjct: 173 KLKEGFIDDSGCL-----TIKAQVQVIRE 196
Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 97 WTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKW 156
WT+ F I R L FEVGGY +L+YP+G + ++S++L + W
Sbjct: 73 WTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCD--VCNHLSLFLCVAHHEKLLPG-W 129
Query: 157 DCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAV 216
FA + +A+ N D K+ H D+ HRF K+ GW F + K G++ ++ +
Sbjct: 130 SHFAQFTIAVSN-KDPKKSKHSDTLHRFWKKEHDWGWKKFIELPKL---KEGFIDDSGCL 185
Query: 217 LITADILILNESV 229
I A + ++ E V
Sbjct: 186 TIKAQVQVIRERV 198
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 54/327 (16%)
Query: 410 IGWRSGNGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVY 469
+ + + N + + G + I NF+ KD S F + + R Y
Sbjct: 1010 VEYENQNFLTTNTLNQGSWIISINNFSNRKDQFY----------SPIFSLIGSNWRCKFY 1059
Query: 470 PRGQ-SQPPCHLSVFLEVMDSRNTSSDWSCF----VSHRLSVVNQKMEEKSVTKESQNRY 524
G+ + LS+F+ D N + ++ F +S++L+++NQK +S+ K S + +
Sbjct: 1060 SNGKDASTSGKLSIFISNCDLLN--NPFTIFLEKSISYKLTLINQKNPNESIQKSSSHTF 1117
Query: 525 SKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDFTDQDTESTNAG 584
S + G+ F+ L SL + ++GFLV +T+ + TS + + D+
Sbjct: 1118 SIKEFNHGYGSFIGLFSLLNPNNGFLVNNTIKVRIDA---APTSPLVNTYDKYN------ 1168
Query: 585 SQMDKIGKRSSFTWKVENFLSFKEIMETRK---IFSKFFQAGGCELRIGVYE----SFDT 637
IG +F++ V M ++K S F + G + I +Y S +
Sbjct: 1169 -----IGLNQAFSYSVP--------MMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSNY 1215
Query: 638 ICIYLESDQSVGSDLDKNFWVRYRMAVVNQKNPTKTV--WKESSICTKTWNNSVLQFMKV 695
+ ++LE + V + + +++Q P +++ W + +K+ + +F+ V
Sbjct: 1216 MSVFLEYRDEGEEN------VHFSLELISQLYPEQSIKYWVQYRFNSKSNSFGYPKFIGV 1269
Query: 696 SDMLEADAGFLMRDTVVFVCEILDCCP 722
S +++ D GFL+ DT++ IL P
Sbjct: 1270 STLMDPDMGFLVNDTIILNVSILQLKP 1296
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 127/309 (41%), Gaps = 48/309 (15%)
Query: 98 TVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRGTSSSKW- 156
+++NF R +S F + G + R Y G + G +SI++ D + +
Sbjct: 1031 SINNFSN-RKDQFYSPIFSLIGSNWRCKFYSNGKDASTSGKLSIFISNCDLLNNPFTIFL 1089
Query: 157 DCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAV 216
+ SY+L ++N + +++I + S H FS K+ +HG+ F ++ + G+L NN
Sbjct: 1090 EKSISYKLTLINQKNPNESIQKSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNN--- 1146
Query: 217 LITADILILNESVSFMRDNNELQSPSMVSSSVVAGPVSDVLSGKFTWKV---HNFSLFKE 273
+ + A P S +++ + + FS
Sbjct: 1147 --------------------------TIKVRIDAAPTSPLVNTYDKYNIGLNQAFSYSVP 1180
Query: 274 MI--KTQKIMSPVFPAGECNLRISVYQSSVNGQEYLSMCLESKDMEKTVVSDRSCWCLFR 331
M+ K++ +SP+F + I +Y Y+S+ LE +D + V F
Sbjct: 1181 MMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSNYMSVFLEYRDEGEENVH-------FS 1233
Query: 332 MSVLNQSPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMADFVGHDSGFLVDDTAVFS 391
+ +++Q + RF + + S G+ ++ ++ + D GFLV+DT + +
Sbjct: 1234 LELISQLYPEQSIKYWVQYRFNS-----KSNSFGYPKFIGVSTLMDPDMGFLVNDTIILN 1288
Query: 392 TSFHVIKEI 400
S +K I
Sbjct: 1289 VSILQLKPI 1297
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSV-FLEV 486
F + +E F RL + + ++ C + N +++V PR P SV F
Sbjct: 71 FQFTVERFNRLSESV----LSPPCF------VRNLPWKIMVMPRLYPDRPHQKSVGFFLQ 120
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
++ + S+ WSC L ++N K +EKS ++ + + DWG+ F+ + + D +
Sbjct: 121 CNAESDSTSWSCHAQAVLKIINYKDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPE 180
Query: 547 SGFLVQDTVVFSAEV 561
GF+ +D V F V
Sbjct: 181 KGFIEEDKVTFEVYV 195
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 58 PAAATGGVEDLSLGTRDGSGGAQESVAVDRRGEHSAVCRWTVHNFPRIRARALWSKYFEV 117
P V + ++ DG +E + D A ++TV F R+ L F V
Sbjct: 34 PRITQNPVINGNVAMADGHNNTEEDMEDDTSWRSEATFQFTVERFNRLSESVLSPPCF-V 92
Query: 118 GGYDCRLLV----YPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLSDES 173
+++V YP Q G+ +LQ + S+ W C A L I+N D+
Sbjct: 93 RNLPWKIMVMPRLYPDRPHQKSVGF---FLQCN--AESDSTSWSCHAQAVLKIINYKDDE 147
Query: 174 KTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYL 210
K+ R H F K+ G+ +F S V D + G++
Sbjct: 148 KSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFI 184
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 96 RWTVHNFP-----RIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRG 150
+W + N+ ++ +AL S + + ++ VYPKGD YIS+YL++ +
Sbjct: 324 KWIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKGDENK--EYISLYLRVNNIEE 381
Query: 151 TSSSKWDCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYL 210
+S K Y +VN+ D+SK+I + + + GW F S + + + G+L
Sbjct: 382 PNSLK----VEYSFTLVNVLDKSKSITKKEDKKVFISSEGWGWGKFLLSDLI-NKENGWL 436
Query: 211 FNNDAVLITADILILNE 227
N+D ++I I ILNE
Sbjct: 437 SNDDKLIIEIYIKILNE 453
Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 421 SDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHL 480
S+G+ K W I N++ + K K+ + S I + ++ VYP+G ++
Sbjct: 318 SNGYRNK--WIISNYSSVA----KSKLNCQALSSPMLSILSHLFQVCVYPKGDENKE-YI 370
Query: 481 SVFLEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLT 540
S++L V N S V + ++VN + KS+TK+ + +++ WGW +F+ L+
Sbjct: 371 SLYLRV---NNIEEPNSLKVEYSFTLVNVLDKSKSITKKEDKKVFISSEGWGWGKFL-LS 426
Query: 541 SLFDQDSGFLVQ-DTVVFSAEVLILKE 566
L ++++G+L D ++ + IL E
Sbjct: 427 DLINKENGWLSNDDKLIIEIYIKILNE 453
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSV-FLEV 486
F + +E F+RL + + ++ C + N +++V PR P SV F
Sbjct: 71 FQFTVERFSRLSESV----LSPPCF------VRNLPWKIMVMPRFYPDRPHQKSVGFFLQ 120
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
++ + S+ WSC L ++N + +EKS ++ + + DWG+ F+ + + D +
Sbjct: 121 CNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPE 180
Query: 547 SGFLVQDTVVFSAEV 561
GF+ D V F V
Sbjct: 181 KGFIDDDKVTFEVFV 195
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 58 PAAATGGVEDLSLGTRDGSGGAQESVAVDRRGEHSAVCRWTVHNFPRIRARALWSKYFEV 117
P V + ++ DG A+E + D A ++TV F R+ L F V
Sbjct: 34 PRITQNPVINGNVALSDGHNTAEEDMEDDTSWRSEATFQFTVERFSRLSESVLSPPCF-V 92
Query: 118 GGYDCRLLV----YPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLSDES 173
+++V YP Q G+ +LQ + S+ W C A L I+N D+
Sbjct: 93 RNLPWKIMVMPRFYPDRPHQKSVGF---FLQCN--AESDSTSWSCHAQAVLKIINYRDDE 147
Query: 174 KTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDA---VLITAD 221
K+ R H F K+ G+ +F S V D + G++ ++ V + AD
Sbjct: 148 KSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQAD 198
>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp5 PE=3 SV=3
Length = 1108
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 427 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 486
+FTW I+++ L +R + S +F +G+R ++ +P+G Q S+FLE
Sbjct: 57 RFTWHIKSWHELD----RRAV------SPQFAVGSRQFKITYFPQGTLQSAGFTSIFLEY 106
Query: 487 MDSR--NTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFD 544
+ S S+ + C + N + SV + R+S DWG+ +F L L
Sbjct: 107 IPSEEEKLSNKYGCCCQFAFVISNPRKPSLSVANSAHCRFSPEIVDWGFTQFAELKKLLC 166
Query: 545 Q---DSGFLVQD-TVVFSAEVLILKETS--IMQDFTDQDTE 579
+ D +V+D ++ +A V ILK+ + + F D D++
Sbjct: 167 RQAPDVPPIVEDGALLLTAYVRILKDPTGVLWHSFNDYDSK 207
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSV-FLEV 486
F + +E F+RL + + ++ C + N +++V PR P SV F
Sbjct: 72 FQFTVERFSRLSESV----LSPPCF------VRNLPWKIMVMPRFYPDRPHQKSVGFFLQ 121
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
++ + S+ WSC L ++N + ++KS ++ + + DWG+ F+ + + D +
Sbjct: 122 CNAESDSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPE 181
Query: 547 SGFLVQDTVVFSAEV 561
GF+ D V F V
Sbjct: 182 KGFIDDDKVTFEVFV 196
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 58 PAAATGGVEDLSLGTRDGSGGAQESVAVDRRGEHSAVCRWTVHNFPRIRARALWSKYFEV 117
P V + ++ DG A+E + D A ++TV F R+ L F V
Sbjct: 35 PRITQNPVINGNVALSDGHSNAEEDMEDDTSWRSEATFQFTVERFSRLSESVLSPPCF-V 93
Query: 118 GGYDCRLLV----YPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLSDES 173
+++V YP Q G+ +LQ + S+ W C A L I+N D+
Sbjct: 94 RNLPWKIMVMPRFYPDRPHQKSVGF---FLQCN--AESDSTSWSCHAQAVLKIINYRDDD 148
Query: 174 KTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDA---VLITAD 221
K+ R H F K+ G+ +F S V D + G++ ++ V + AD
Sbjct: 149 KSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQAD 199
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 11/135 (8%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSV-FLEV 486
F + +E F+RL + + ++ C + N +++V PR P SV F
Sbjct: 72 FQFTVERFSRLSESV----LSPPCF------VRNLPWKIMVMPRFYPDRPHQKSVGFFLQ 121
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
++ + S+ WSC L ++N + ++KS ++ + + DWG+ F+ + + D +
Sbjct: 122 CNAESDSTSWSCHAQAVLKIINYRDDDKSFSRRISHLFFHEENDWGFSNFMAWSEVTDPE 181
Query: 547 SGFLVQDTVVFSAEV 561
GF+ D V F V
Sbjct: 182 KGFIDDDKVTFEVFV 196
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 58 PAAATGGVEDLSLGTRDGSGGAQESVAVDRRGEHSAVCRWTVHNFPRIRARALWSKYFEV 117
P V + ++ DG A+E + D A ++TV F R+ L F V
Sbjct: 35 PRITQNPVINGNVTLSDGHSNAEEDMEDDTSWRSEATFQFTVERFSRLSESVLSPPCF-V 93
Query: 118 GGYDCRLLV----YPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNLSDES 173
+++V YP Q G+ +LQ + S+ W C A L I+N D+
Sbjct: 94 RNLPWKIMVMPRFYPDRPHQKSVGF---FLQCN--AESDSTSWSCHAQAVLKIINYRDDD 148
Query: 174 KTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDA---VLITAD 221
K+ R H F ++ G+ +F S V D + G++ ++ V + AD
Sbjct: 149 KSFSRRISHLFFHEENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQAD 199
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 96 RWTVHNFP-----RIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIMDPRG 150
+W + N+ ++ ++L S + + ++ VYPKGD YIS+YL++ +
Sbjct: 324 KWIISNYSSLAKSKLNCKSLSSPILLILSHHFQVCVYPKGDENK--EYISLYLRVNNIEE 381
Query: 151 TSSSKWDCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYL 210
+S K Y +VN+ D+SK+I + K GW F S + + + G+L
Sbjct: 382 PNSLK----VEYSFTLVNVLDKSKSITKRVDKIVFISPKEWGWGKFLLSDLI-NKENGWL 436
Query: 211 FNNDAVLITADILILNE 227
N+D + I I ILNE
Sbjct: 437 SNDDKLTIEIYIKILNE 453
Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
Query: 421 SDGHMGKFTWRIENFTRL-KDLLKKRKITG--LCIKSRRFQIGNRDCRLIVYPRGQSQPP 477
S+G+ K W I N++ L K L + ++ L I S FQ+ VYP+G
Sbjct: 318 SNGYRNK--WIISNYSSLAKSKLNCKSLSSPILLILSHHFQV-------CVYPKGDENKE 368
Query: 478 CHLSVFLEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFV 537
++S++L V N S V + ++VN + KS+TK + K+WGW +F+
Sbjct: 369 -YISLYLRV---NNIEEPNSLKVEYSFTLVNVLDKSKSITKRVDKIVFISPKEWGWGKFL 424
Query: 538 TLTSLFDQDSGFLVQD 553
L+ L ++++G+L D
Sbjct: 425 -LSDLINKENGWLSND 439
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 430 WRIENFT-RLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRG--QSQPPCHLSVFLEV 486
W I N++ +L+D K + I +S F +GN ++ YP G + LS++L
Sbjct: 316 WVITNWSQKLQDYPKPKSI-----ESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYK 370
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
D + S V ++N+ ++ S N + K WGWR F+ SL
Sbjct: 371 FDDQTPSK-----VQFSFELLNKDF-TRNRKLASTNIFHTENK-WGWRSFIN-NSLVTTQ 422
Query: 547 SGFLVQDTVVFSAEVLILKE 566
+GF++Q++V + + IL E
Sbjct: 423 TGFVIQNSVTLNINIEILPE 442
>sp|Q86KX6|Y2348_DICDI TNF receptor-associated factor family protein DDB_G0272348
OS=Dictyostelium discoideum GN=DDB_G0272348 PE=3 SV=2
Length = 595
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 427 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 486
K W I N++ + ++ I+ IKS F+IGN L +P G+ + + S+FL
Sbjct: 458 KNKWVISNYSEQE----QQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLN-YCSIFL-- 510
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRY--SKAAKDWGWREFVTLTSLFD 544
T D S V++ + +VN ++ ++ K +Y + +G +F+ L +
Sbjct: 511 ---YKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLN 567
Query: 545 QDSGFLVQDTVVFSAEVLILKETSIMQ 571
+GFL+ D++ E+ +E +Q
Sbjct: 568 DANGFLINDSITIEIEIFATEEILPLQ 594
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRG-QSQPPCHLSV 482
+ W I NF+ ++ + G +KS F G D C L + P+G + +LS+
Sbjct: 98 YMWTINNFSFCREEM------GEVLKSSTFSAGCNDKLKWC-LRINPKGLDEESRDYLSL 150
Query: 483 FLEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTS 541
+L ++ N S + F + S++N K EE ESQ Y KDWG+++F+
Sbjct: 151 YLLLVQC-NKSEVRAKF---KFSILNAKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDF 205
Query: 542 LFDQDSGFLVQDTVVFSAEVLILKET 567
L D+ +G L D + EV ++ ET
Sbjct: 206 LLDEANGLLPGDRLSIFCEVSVVAET 231
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 23/146 (15%)
Query: 427 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEV 486
K W I+NF+ K++ G S +G+ L +YP G++ P LS++L +
Sbjct: 305 KSVWDIKNFS------KRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSNSLSLYLVL 358
Query: 487 MDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQD 546
T FV+ +S+ N + + T E+ WGW F++D
Sbjct: 359 TKGEKT------FVNFSISIKNHNGNDLNSTFENDKCLEVGGTRWGWA--------FEKD 404
Query: 547 ---SGFLVQDTVVFSAEVLILKETSI 569
G+L DT+ V I K+ I
Sbjct: 405 FKTGGYLKNDTLSIQFTVAIKKQPLI 430
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G +KS F G D C L V P+G +
Sbjct: 489 YMWTINNFSFCREEM------GEVLKSSTFSAGANDKLKWC-LRVNPKGLDEESKDYLSL 541
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYS-KAAKDWGWREFVTLTSL 542
++ S N S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 542 YLLLVSCNKSEVRAKF---KFSILNAKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 597
Query: 543 FDQDSGFLVQDTVVFSAEVLILK-------ETSIMQDFTDQDTESTNAGSQMDKIGKRSS 595
D+ +G L +D + EV ++ +++I+Q + S + G+ D K S
Sbjct: 598 LDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFDN-EKFSD 656
Query: 596 FTWKV--ENFLSFKEIMETRK-IFSKFFQ 621
T V F + K I+ R +F+ F+
Sbjct: 657 VTLSVGGREFQAHKAILAARSDVFAAMFE 685
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 26/127 (20%)
Query: 93 AVCRWTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQALPGYISIYLQIM------ 146
A W V NF + + +S F+ G R++++PKG +Q Y S++L+ +
Sbjct: 52 ASYSWVVKNFSTLEDKT-YSPLFKAGHTTWRIVLFPKGCNQT--EYASVFLEYLPQCKVE 108
Query: 147 -----------------DPRGTSSSKWDCFASYRLAIVNLSDESKTIHRDSWHRFSSKKK 189
DP + + C A + L++ N+ D + S HRF S+ K
Sbjct: 109 AIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSHHRFRSEVK 168
Query: 190 SHGWCDF 196
G+ F
Sbjct: 169 DWGFTRF 175
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 39/169 (23%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVM 487
++W ++NF+ L+D S F+ G+ R++++P+G +Q + SVFLE +
Sbjct: 54 YSWVVKNFSTLED----------KTYSPLFKAGHTTWRIVLFPKGCNQTE-YASVFLEYL 102
Query: 488 DS------RNTSSD------------------WSCFVSHRLSVVNQKMEEKSVTKESQNR 523
R ++ +SC LS+ N + S +R
Sbjct: 103 PQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQINTSHHR 162
Query: 524 YSKAAKDWGWREFVTLTSLF----DQDSGFLVQDTVVFSAEVLILKETS 568
+ KDWG+ FV L + + FL D + S V +L++ +
Sbjct: 163 FRSEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICISVTVRVLQDPT 211
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 261 FTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGQEYLSMCLE 312
++W V NFS ++ K SP+F AG RI ++ N EY S+ LE
Sbjct: 54 YSWVVKNFSTLED-----KTYSPLFKAGHTTWRIVLFPKGCNQTEYASVFLE 100
>sp|Q8I3Z1|MLRR1_PLAF7 MATH and LRR domain-containing protein PFE0570w OS=Plasmodium
falciparum (isolate 3D7) GN=PFE0570w PE=2 SV=1
Length = 10061
Score = 41.2 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 465 RLIVYPRGQSQPPCHLSVFLEVMDSRNTSSDWSCFVSH-RLSVVNQKMEEKSVTKESQNR 523
+++V+PRG S ++S +LEV+ S+W H +L+V N K + S++ S
Sbjct: 1361 KVLVHPRGNSNDDNYMSAYLEVIKQDFYPSEWVFPNVHFQLTVHNFKNRKNSISSASCWS 1420
Query: 524 YSKAAKDWGWREFVT------LTSLFDQDSGFLVQDTV 555
++ + GW++ ++ ++ D+ G L++ V
Sbjct: 1421 FTNNSLSRGWQKMISHSKINKVSGFLDESGGLLIKGKV 1458
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Query: 503 RLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEV 561
+ S++N K EE ESQ Y KDWG+++F+ L D+ +G L D + EV
Sbjct: 103 KFSLLNAKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
Query: 562 LILKETSIMQDFTDQDTESTNAGSQMDKIGK--------RSSFTWKVENFLSFKEIMETR 613
+++++ + T+ +T + +G SF + + F + K ++ R
Sbjct: 162 SVVQDSVNISGHTNTNTLKVPECRLAEDLGNLWENTRFTDCSFFVRGQEFKAHKSVLAAR 221
Query: 614 K-IFSKFFQ 621
+F+ F+
Sbjct: 222 SPVFNAMFE 230
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRGQSQPPCHLSVF 483
+ W I NF+ ++ + G IKS F G D C L V P+G +
Sbjct: 34 YMWTINNFSFCREEM------GEVIKSSTFSSGANDKLKWC-LRVNPKGLDEESKDYLSL 86
Query: 484 LEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSL 542
++ S S + F + S++N K EE ESQ Y KDWG+++F+ L
Sbjct: 87 YLLLVSCPKSEVRAKF---KFSILNAKGEETKAM-ESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 543 FDQDSGFLVQDTVVFSAEVLILKET 567
D+ +G L D + EV +++++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDS 167
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVM 487
FTW I ++ L T S RF+IG+ + ++++P+G ++V+LE
Sbjct: 42 FTWNIPDWNEL---------TNPKYNSPRFRIGDFEWDILLFPQGNHNKG--VAVYLEPH 90
Query: 488 DSRN----------TSSDWSCFVSHRLSVVNQ-KMEEKSVTKESQNRYSKAAKDWGWREF 536
DW C + + + ++ +S +R++ DWG+
Sbjct: 91 PEEKLDETTGEMVPVDPDWYCCAQFAIGISRPGNGDTINLINKSHHRFNALDTDWGFANL 150
Query: 537 VTLTSLFDQDSG----FLVQDTVVFSAEVLILKETS--IMQDFTDQDTESTNA 583
+ L +L G FL + T+ +A V ILK+ + + +F + D++
Sbjct: 151 IDLNNLKHPSKGRPLSFLNEGTLNITAYVRILKDPTGVLWHNFLNYDSKKVTG 203
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 503 RLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEV 561
+ S++N K EE ESQ Y KDWG+++F+ L D+ +G L D + EV
Sbjct: 103 KFSLLNDKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
Query: 562 LILKETSIMQDFTDQDT 578
+++++ + T +T
Sbjct: 162 SVVQDSVNVSGHTSTNT 178
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 503 RLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEV 561
+ S++N K EE ESQ Y KDWG+++F+ L D+ +G L D + EV
Sbjct: 103 KFSLLNAKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
Query: 562 LILKET 567
+++++
Sbjct: 162 SVVQDS 167
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 503 RLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEV 561
+ S++N K EE ESQ Y KDWG+++F+ L D+ +G L D + EV
Sbjct: 103 KFSLLNAKREETKAM-ESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEV 161
Query: 562 LILKET 567
+++++
Sbjct: 162 SVVQDS 167
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 37.4 bits (85), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 428 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRD----CRLIVYPRG---QSQPPCHL 480
+ W I NF+ R+ TG +KS F G D C L V P+G +S+ L
Sbjct: 34 YMWTINNFSFC------REETGEVLKSSSFSSGPNDKLKWC-LRVNPKGLDDESKDYLSL 86
Query: 481 SVFLEVMDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKA-AKDWGWREFVTL 539
+ L + + + S++N K EE ESQ Y KDWG+++++
Sbjct: 87 YLLLVSCPKNEVRAKF------KFSLLNSKNEETKAM-ESQRAYRFVQGKDWGFKKYIRR 139
Query: 540 TSLFDQDSGFLVQDTVVFSAEVLILKET 567
L D+ +G L D + EV +++++
Sbjct: 140 DFLLDEANGLLPDDKLTLYCEVSVVQDS 167
>sp|Q54FD5|Y0931_DICDI TNF receptor-associated factor family protein DDB_G0290931
OS=Dictyostelium discoideum GN=DDB_G0290931 PE=3 SV=1
Length = 511
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 96 RWTVHNFPRI-----RARALWSKYFEVGGYDCRLLVYPKGDSQALPG--YISIYLQIM-- 146
+W + N+ + ++S F++ + + +YP G +L G ++S++L
Sbjct: 378 KWIISNYSNLVENTPHPEYIYSPSFDIVSREFVISIYPNG---SLTGKDHLSLFLHNNNE 434
Query: 147 DPRGTSSSKWDCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSK 206
DP + L +VNL D+SK+I R F ++ GW F S + + K
Sbjct: 435 DPNK---------LEFTLELVNLLDKSKSITRKGLEVFEEIERK-GWSKFLASKLI-NKK 483
Query: 207 LGYLFNNDAVLITADILILNESV 229
G+L ++D + I + IL + +
Sbjct: 484 NGWLSDDDKLTINIYVKILYDDI 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,571,086
Number of Sequences: 539616
Number of extensions: 21649473
Number of successful extensions: 111625
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 84796
Number of HSP's gapped (non-prelim): 17344
length of query: 1431
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1301
effective length of database: 121,419,379
effective search space: 157966612079
effective search space used: 157966612079
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)