Query 000550
Match_columns 1431
No_of_seqs 419 out of 2357
Neff 5.2
Searched_HMMs 29240
Date Tue Mar 26 16:59:47 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000550.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_323-327//hhsearch_pdb/000550hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s4w_B Protein FACD2, fanconi 1.0 1 1 796.7 25.6 425 761-1362 10-475 (1323)
2 3hqi_A Speckle-type POZ protei 1.0 1 1 215.9 11.3 185 424-622 5-202 (312)
3 2f1z_A Ubiquitin carboxyl-term 1.0 1 1 213.8 12.5 153 72-228 10-163 (522)
4 2foj_A Ubiquitin carboxyl-term 1.0 1 1 206.1 13.2 133 90-226 16-149 (155)
5 2foj_A Ubiquitin carboxyl-term 1.0 1 1 205.6 13.5 137 423-570 16-154 (155)
6 2f1z_A Ubiquitin carboxyl-term 1.0 1 1 203.1 11.2 132 258-401 30-164 (522)
7 4gjh_A TNF receptor-associated 1.0 1 1 198.5 11.6 139 257-396 22-172 (178)
8 4ghu_A TNF receptor-associated 1.0 1 1 198.0 9.3 143 256-401 37-191 (198)
9 4gjh_A TNF receptor-associated 1.0 1 1 196.4 8.4 142 422-565 20-174 (178)
10 3ivv_A Speckle-type POZ protei 1.0 1 1 194.5 11.7 134 421-565 6-144 (145)
No 1
>3s4w_B Protein FACD2, fanconi anemia group D2 protein homolog; DNA repair, DNA binding protein; 3.41A {Mus musculus}
Probab=1.00 E-value=1 Score=796.69 Aligned_cols=425 Identities=23% Similarity=0.371 Sum_probs=393.4
Q ss_pred HHHHHHHHHHHCCEEECCCCCCCCC---HHHHHHHH-------CCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 2579999886315010179999980---36788954-------0317679988611220247956672312774214898
Q 000550 761 EEDIVRNLLSRAGFHLTYGDNPSQP---QVTLREKL-------LMDAGAIAGFLTGLRVYLDDPAKAKRLLLPTKLSGSD 830 (1431)
Q Consensus 761 ~~~~f~~~l~~ag~~l~~g~~~~~~---q~~~~~~~-------~~~~~~i~~f~~~l~~~~~~~~~~~~~llp~~~~~~~ 830 (1431)
|+++|..+|++||++|+.|+.+|++ |+.|+.|| |.||.+|++|++||+.|++|+++||+|||||.+.+++
T Consensus 10 ~~~~f~~~L~~aG~~L~~~~~~~~l~~d~~~f~~kl~~~L~~~~~yp~~v~~F~~gl~~~i~~~~~~~~~Llp~~~~~~~ 89 (1323)
T 3s4w_B 10 NGSVFVKLLKASGLTLKTGENQNQLGVDQVIFQRKLFQALRKHPAYPKVIEEFVNGLESYTEDSESLRNCLLSCERLQDE 89 (1323)
T ss_dssp -CCHHHHHHHHTTEECCCTTSCCEESSCTTHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHTTSHHHHHHHSSBCBC----
T ss_pred CCHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
T ss_conf 50799999998397636799986012558999999999998589935799999999999946899999984777877765
Q ss_pred CCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87544578886568986310046699999999998641048999998899998999999898999998622223797666
Q 000550 831 GKKVAKTDESSPSVMNLLMGVKVLQQAIIDLLLDIMVECCQPSDGNYYGDSSDANSKPPLDANGGARPLEADRENGASES 910 (1431)
Q Consensus 831 ~~~~~~~~~~~~sl~~ll~gv~~lq~aii~~l~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1431)
+. +.+..|++|||+|||||+.||++||++||+|||||+..
T Consensus 90 ~~--~~~~~~~eSLiklLL~i~~LQ~~li~~Llekl~E~~~~-------------------------------------- 129 (1323)
T 3s4w_B 90 EA--SMGTFYSKSLIKLLLGIDILQPAIIKMLFEKVPQFLFE-------------------------------------- 129 (1323)
T ss_dssp --------CCCCBHHHHHHHSTTTHHHHHHHHHHHHHHHHSC--------------------------------------
T ss_pred CC--CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC--------------------------------------
T ss_conf 54--32353317999998588231389999999999999850--------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 65421102579989888753310247876542222389999999976789986422223467881245766758775320
Q 000550 911 AQFPLFERLDSGADDNSTTSAVQSSDLSGIDIAEKALPGQPIFPPETSAGGSLESASFRSKTKWPEQSAELLGLIVNSLR 990 (1431)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~livn~l~ 990 (1431)
+++.+|+++| |||+||||
T Consensus 130 -----------------------~~~~~~~~l~---------------------------------------rLIl~QlR 147 (1323)
T 3s4w_B 130 -----------------------SENRDGINMA---------------------------------------RLIINQLK 147 (1323)
T ss_dssp -----------------------CCCTTCCCHH---------------------------------------HHHHGGGT
T ss_pred -----------------------CCCCCCCCHH---------------------------------------HHHHHHHH
T ss_conf -----------------------3677666679---------------------------------------99999873
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
Q ss_conf 01366889999999993158999988402986533014530322127898158999999984248989854223675310
Q 000550 991 ALDGAVPQGCPEPRRRPQSAQKISLVLDKAPKHLQPDLVALVPKLVEHSEHPLAADALIERLQKSDAEPALRMPVFVALS 1070 (1431)
Q Consensus 991 ~ld~~v~~~~~~~r~~~~~~~k~~~~l~~ap~~lq~d~i~~~p~~~~~s~h~~~a~~l~~~l~~~~~~~~l~~p~~~als 1070 (1431)
|||++||. +++++|||+||++||++||+|||+++|||++||||+.||++|.++|+++ |+|++|||||||
T Consensus 148 wLD~ivd~--------~~l~~ki~~vl~vap~~lQ~diI~sLPeIl~ds~H~~v~~~L~~lL~~~---~~L~~~iLdaLs 216 (1323)
T 3s4w_B 148 WLDRIVDG--------KDLTAQMMQLISVAPVNLQHDFITSLPEILGDSQHANVGKELGELLVQN---TSLTVPILDVFS 216 (1323)
T ss_dssp TCSCCSSH--------HHHHHHHHHHHHHSCTTTHHHHHHTHHHHSCGGGHHHHHHHHHHHHHHC---STTHHHHHHHHH
T ss_pred HHCCCCCH--------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC---CCHHHHHHHHHH
T ss_conf 52244788--------9999999999985869889999987588726252199999999997328---513777999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH------------------HCCCC
Q ss_conf 354595899999999996412899985056677775301123534899999999988------------------22887
Q 000550 1071 QLDFGSEVWERILLKSLELLTDSNDEPLAVTIDFIFKAASQCQHLPEAVRSVRVRLK------------------NLGAE 1132 (1431)
Q Consensus 1071 ~l~~~~~~~~~~~~~~~~~l~~~~~e~l~~~i~f~~~~~~~c~~~~~~~~~~~~~l~------------------~~g~~ 1132 (1431)
+|+|++++|++||+++|+.|+++++|+||++|+||||++++-. ++++|+++|.+|+ ++|+.
T Consensus 217 ~L~Ls~~~l~~vr~~vl~~L~s~~~e~LP~lIkFLL~s~t~~~-~~evI~~LR~~L~~~~~~~p~~~~~s~~~~k~~~~~ 295 (1323)
T 3s4w_B 217 SLRLDPNFLSKIRQLVMGKLSSVRLEDFPVIVKFLLHSVTDTT-SLEVIAELRENLNVQQFILPSRIQASQSKLKSKGLA 295 (1323)
T ss_dssp HSCCCHHHHHHHHHHHHHSTTSSCTTHHHHHHHHHHHSCSSTT-HHHHHHHHHHHHHCC---------------------
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 0889999999999999998524981543899999987388865-999999999872763235613443345554135666
Q ss_pred C---------CHH---HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf 7---------704---8999885420323479999974047878899877889865335899998875210123321024
Q 000550 1133 V---------SPC---VLDFLSKTVNSWGDVAETILRDIDCDDDFGDNCSTMPSGLFLFGENGPTSDSLHVMDEQAFRAT 1200 (1431)
Q Consensus 1133 ~---------s~~---~ld~~~~~v~~~~~~~e~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1200 (1431)
. .+| +||+|+++|+++++++|||||+|++++++++
T Consensus 296 ~~~~~~~~s~~~~~~lild~lks~l~~~k~i~eAwlK~I~~~~~~~~--------------------------------- 342 (1323)
T 3s4w_B 296 SSSGNQENSDKDCIVLVFDVIKSAIRYEKTISEAWFKAIERIESAAE--------------------------------- 342 (1323)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHGGGSTT---------------------------------
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC---------------------------------
T ss_conf 67765445552259999999999996083999999999737885122---------------------------------
Q ss_pred CCHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 52156999998852782-38999999999985063036689999999974203689875223445556311354210102
Q 000550 1201 RHFSDIYILIEMLSIPC-IAVEAAQTFERAVARGTIVAQSIALVLERRLAQRLNFNPGFVAENFQHTDVVVEGEQLIVQR 1279 (1431)
Q Consensus 1201 ~~~~d~~~l~~~~s~~~-~~~~~~~~~er~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 1279 (1431)
|+++|++||++||++|+ .+++++++++|+|++|+|++|++++++. .|..|++
T Consensus 343 hk~~Dl~vLlii~s~n~~~rk~aE~ilrkkI~~G~it~~ll~~~f~---------------------------~h~~vL~ 395 (1323)
T 3s4w_B 343 HKSLDVVMLLIIYSTSTQTKKGVEKLLRNKIQSDCIQEQLLDSAFS---------------------------THYLVLK 395 (1323)
T ss_dssp CCTHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTCSCHHHHHHHHH---------------------------HHHHHHT
T ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH---------------------------HHHHHHH
T ss_conf 5426999999997077035888999999999738855999999997---------------------------3089999
Q ss_pred CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 02466899899971275801455599999998632579705778997977400479988754431267999987410121
Q 000550 1280 DDFTCVLGLAETLALSRDIRVREFVKILYTILLKWYPDESYRGRMLKRLVDRATSTTESSRGVDLDLEILVILVCEEQEI 1359 (1431)
Q Consensus 1280 ~~f~~~l~la~~l~~s~~~~v~~f~~~~y~~~f~~~~~~~~~~~~~~~lv~~~~s~~~~~~~v~~~l~~l~~lv~~~~~~ 1359 (1431)
++|+++|+|||+|++|+|++|++||++||+++|++| |+|||||||++||+|+||| ++.|||.+||||..|++.+++.
T Consensus 396 ~~f~siL~La~~Ll~S~~~~v~~Fg~~lY~~lF~~f-d~~~qqeVl~~Lv~hi~sg--~~~eVd~ALdvL~~L~~~~~~~ 472 (1323)
T 3s4w_B 396 DICPSILLLAQTLFHSQDQRIILFGSLLYKYAFKFF-DTYCQQEVVGALVTHVCSG--TEAEVDTALDVLLELIVLNASA 472 (1323)
T ss_dssp TSHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHSS-CHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHCCHHH
T ss_conf 999999999999884887799999999999999852-5044999999987533289--8188999999999997317887
Q ss_pred HHH
Q ss_conf 478
Q 000550 1360 IRP 1362 (1431)
Q Consensus 1360 ~~~ 1362 (1431)
.+|
T Consensus 473 l~~ 475 (1323)
T 3s4w_B 473 MRL 475 (1323)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 757
No 2
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=1.00 E-value=1 Score=215.89 Aligned_cols=185 Identities=23% Similarity=0.402 Sum_probs=143.7
Q ss_pred CCCEEEEEECCCCCCHHHHHCCCCCCCEECCCCEEECCC---EEEEEEEECCCCC-CCCCEEEEEEECCCCCCCCCCEEE
Q ss_conf 762999999463224121100335893420883998350---5999999679999-999299999970699999998199
Q 000550 424 HMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNR---DCRLIVYPRGQSQ-PPCHLSVFLEVMDSRNTSSDWSCF 499 (1431)
Q Consensus 424 ~~~~~twkI~NFS~lke~lk~~k~~Ge~i~S~~F~vGG~---~WRL~iYP~G~~~-~~~yLSIYL~l~d~~~~~~~WsV~ 499 (1431)
..++|+|+|+|||.++. ..|++++|++|.+||+ +|+|.+||+|++. .++|+|+||+|.+. ..|+++
T Consensus 5 ~~~~~~w~I~nfs~~~~------~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~~~~~~lslyL~~~~~----~~~~v~ 74 (312)
T 3hqi_A 5 VKFSYMWTINNFSFCRE------EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC----PKSEVR 74 (312)
T ss_dssp EEEEEEEEETTGGGCCC------CTTCCEECCCBCC--CCCCEEEEEEETTCCC--CTTEEEEEEEEEEC----CC-CEE
T ss_pred EEEEEEEEECCCCHHHH------CCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCC----CCCCEE
T ss_conf 99999999937101323------49975750876349988865999998998986678838999997378----998489
Q ss_pred EEEEEEEEECCCCCEEEEE-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC------
Q ss_conf 9999999958899623996-244332356767654453352121369899711999999999999802565535------
Q 000550 500 VSHRLSVVNQKMEEKSVTK-ESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQD------ 572 (1431)
Q Consensus 500 a~F~L~LiNq~g~~~Sv~k-es~~~Fs~~~~~WG~~kFIs~sdL~dp~sGYLvdDSLtIeaeV~Vik~tg~~~~------ 572 (1431)
++|+|.|+|++++...... ...+.|+. ..+|||.+||+|++|+++++|||+||+++|+|+|.|++.......
T Consensus 75 a~~~~~l~~~~~~~~~~~~~~~~~~F~~-~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~~~ 153 (312)
T 3hqi_A 75 AKFKFSILNAKGEETKAMESQRAYRFVQ-GKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNM 153 (312)
T ss_dssp EEEEEEEECTTSCEEEEEECSSCEEECT-TCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCCSS
T ss_pred EEEEEEEEECCCCCCCCCCCCCCEECCC-CCCCCHHHHCCHHHHHCCCCCEECCCEEEEEEEEEEEECCCCCCCCCCCCC
T ss_conf 9999999957998334201577355789-997587886659886110037032998999999899840455556566666
Q ss_pred CCCCCC-CCCCCCCCCC-CCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEE
Q ss_conf 888766-4564455322-2587514899930204338886220324864000
Q 000550 573 FTDQDT-ESTNAGSQMD-KIGKRSSFTWKVENFLSFKEIMETRKIFSKFFQA 622 (1431)
Q Consensus 573 ~~~~ds-k~~~~G~~ld-~~~~d~tFTwkiENFSalKeILaaR~i~SpvF~v 622 (1431)
+....+ ...+++.++. ....|++|.+.++.|.+||.||+++ ||+|..
T Consensus 154 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~---S~~F~~ 202 (312)
T 3hqi_A 154 VKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAAR---SPVFSA 202 (312)
T ss_dssp CCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHH---CHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEECCEEEEHHHHHHHHC---CHHHHH
T ss_conf 6789834799999998389987469998998985879999873---999998
No 3
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=213.84 Aligned_cols=153 Identities=24% Similarity=0.362 Sum_probs=131.7
Q ss_pred CCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCEEECCCEEECCEEEEEEEEECCCCCC-CCCCEEEEEEEECCCC
Q ss_conf 678999933579971368423499999901266678435328369938369999997899999-9993999999708999
Q 000550 72 TRDGSGGAQESVAVDRRGEHSAVCRWTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQA-LPGYISIYLQIMDPRG 150 (1431)
Q Consensus 72 ~~~~~~~~~~~~~vdr~~e~~at~twtI~NFS~LK~e~i~Sp~F~vGG~~WRL~vYPrG~~~~-~~~yLSVYLel~~~~~ 150 (1431)
++++++++.+.|..|.+.+..++|+|+|+|||.+++ .++|++|.+||++|||.+||+|+..+ ..+|+|+||+|.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~w~I~nfS~~~~-~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~- 87 (522)
T 2f1z_A 10 LSDGHNTAEEDMEDDTSWRSEATFQFTVERFSRLSE-SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES- 87 (522)
T ss_dssp ----------------CCCSEEEEEEEESSCTTCCS-CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHCCC-CEECCCEEECCEEEEEEEEECCCCCCCCCCEEEEEEEECCCC-
T ss_conf 445788722223446665677579999899542578-435799899987469999958878899998699999844888-
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEEECCC
Q ss_conf 999985399999999994689960275054144259999987688735002256767822219879999999995076
Q 000550 151 TSSSKWDCFASYRLAIVNLSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAVLITADILILNES 228 (1431)
Q Consensus 151 s~~s~W~v~A~F~L~LvNq~g~s~si~k~s~h~Fs~~~~~WGw~kFI~~sdL~dp~sGFL~n~DsLtIea~V~Vlke~ 228 (1431)
.+.+|.+.|+|+|.|+|++++..++.+...|+|+....+|||.+||+|++|.++++|||.| |+++|+|+|.|...+
T Consensus 88 -~~~~w~v~a~f~l~l~n~~~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~n-D~l~i~~~V~v~~p~ 163 (522)
T 2f1z_A 88 -DSTSWSCHAQAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDD-DKVTFEVFVQADAPH 163 (522)
T ss_dssp -CCSSCBEEEEEEEEECCTTCGGGCEEEECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBT-TBEEEEEEEEECCCB
T ss_pred -CCCCCEEEEEEEEEEECCCCCCCCEECCCEEEECCCCCCCCHHHEEEHHHHCCCCCCCCCC-CCEEEEEEEECCCCC
T ss_conf -8888069999999997588885424314303865899985321046766745866686358-857999986414664
No 4
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=1.00 E-value=1 Score=206.07 Aligned_cols=133 Identities=24% Similarity=0.385 Sum_probs=66.3
Q ss_pred CCCEEEEEEECCCCCCCCCEEECCCEEECCEEEEEEEEECCCCC-CCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 42349999990126667843532836993836999999789999-99993999999708999999985399999999994
Q 000550 90 EHSAVCRWTVHNFPRIRARALWSKYFEVGGYDCRLLVYPKGDSQ-ALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVN 168 (1431)
Q Consensus 90 e~~at~twtI~NFS~LK~e~i~Sp~F~vGG~~WRL~vYPrG~~~-~~~~yLSVYLel~~~~~s~~s~W~v~A~F~L~LvN 168 (1431)
+..++++|+|+|||+++ +.++|++|.+||++|||.+||+|+.. +..+|||+||+|... ..+.+|.+.|+|+|.|+|
T Consensus 16 ~~~~~~~w~I~nfS~~~-~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~--~~~~~w~v~a~~~l~l~~ 92 (155)
T 2foj_A 16 RSEATFQFTVERFSRLS-ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE--SDSTSWSCHAQAVLKIIN 92 (155)
T ss_dssp CSEEEEEEEESSGGGCC-SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTT--CCCSSCEEEEEEEEEECC
T ss_pred CCCCEEEEEECCHHHCC-CCEECCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCC--CCCCCCEEEEEEEEEEEC
T ss_conf 87758999988853168-846959999988347999997887778999889999980798--899898899999999991
Q ss_pred CCCCCCEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEEEC
Q ss_conf 6899602750541442599999876887350022567678222198799999999950
Q 000550 169 LSDESKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDSKLGYLFNNDAVLITADILILN 226 (1431)
Q Consensus 169 q~g~s~si~k~s~h~Fs~~~~~WGw~kFI~~sdL~dp~sGFL~n~DsLtIea~V~Vlk 226 (1431)
++++..++.+...|.|+....+|||++||+|++|+++++|||+| |+++|+|+|+|.+
T Consensus 93 ~~~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~d-D~l~Ie~~V~V~~ 149 (155)
T 2foj_A 93 YRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDD-DKVTFEVFVQADA 149 (155)
T ss_dssp SSCGGGCEEEEEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBT-TBEEEEEEEEECC
T ss_pred CCCCCCEEEECCEEEECCCCCCEEECCEEEHHHHCCCCCCCEEC-CEEEEEEEEEEEC
T ss_conf 89995418934278968999999188769999954867996599-9999999999817
No 5
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=1.00 E-value=1 Score=205.64 Aligned_cols=137 Identities=23% Similarity=0.469 Sum_probs=118.5
Q ss_pred CCCCEEEEEECCCCCCHHHHHCCCCCCCEECCCCEEECCCEEEEEEEECCCCC--CCCCEEEEEEECCCCCCCCCCEEEE
Q ss_conf 87629999994632241211003358934208839983505999999679999--9992999999706999999981999
Q 000550 423 GHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQ--PPCHLSVFLEVMDSRNTSSDWSCFV 500 (1431)
Q Consensus 423 ~~~~~~twkI~NFS~lke~lk~~k~~Ge~i~S~~F~vGG~~WRL~iYP~G~~~--~~~yLSIYL~l~d~~~~~~~WsV~a 500 (1431)
...++|+|+|+|||.+++ .++|+.|.+||++|+|.+||+|+.. .++|||+||+|... ..+.+|+++|
T Consensus 16 ~~~~~~~w~I~nfS~~~~----------~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~-~~~~~w~v~a 84 (155)
T 2foj_A 16 RSEATFQFTVERFSRLSE----------SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE-SDSTSWSCHA 84 (155)
T ss_dssp CSEEEEEEEESSGGGCCS----------CEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTT-CCCSSCEEEE
T ss_pred CCCCEEEEEECCHHHCCC----------CEECCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEEECCC-CCCCCCEEEE
T ss_conf 877589999888531688----------46959999988347999997887778999889999980798-8998988999
Q ss_pred EEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC
Q ss_conf 9999999588996239962443323567676544533521213698997119999999999998025655
Q 000550 501 SHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIM 570 (1431)
Q Consensus 501 ~F~L~LiNq~g~~~Sv~kes~~~Fs~~~~~WG~~kFIs~sdL~dp~sGYLvdDSLtIeaeV~Vik~tg~~ 570 (1431)
+|+|+|+||+++..++.+...+.|.....+|||.+||+|++|+++++|||+||+++|+|+|.|.+++|++
T Consensus 85 ~~~l~l~~~~~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~~tG~~ 154 (155)
T 2foj_A 85 QAVLKIINYRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADAPHGVA 154 (155)
T ss_dssp EEEEEECCSSCGGGCEEEEEEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECCCBSSC
T ss_pred EEEEEEECCCCCCCEEEECCEEEECCCCCCEEECCEEEHHHHCCCCCCCEECCEEEEEEEEEEECCCCCC
T ss_conf 9999999189995418934278968999999188769999954867996599999999999981762554
No 6
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=1.00 E-value=1 Score=203.06 Aligned_cols=132 Identities=17% Similarity=0.290 Sum_probs=86.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCC---CCCEEEEEEEECCCCCCCCCCCCEEEEEEEEE
Q ss_conf 768999991631110222657112993312570399999976789---96349999995277766558981899999999
Q 000550 258 SGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVN---GQEYLSMCLESKDMEKTVVSDRSCWCLFRMSV 334 (1431)
Q Consensus 258 ~gsftwkI~NFS~lke~~k~eki~Sp~F~vgGy~WrI~IYPnG~~---~~~yLSIyL~L~d~e~~~~~~wsv~a~ftlsL 334 (1431)
.++|+|+|+|||.+++ .++|++|.+||++|+|.+||+|.. .++|||+||++.+.. ....|.++|+|+|.|
T Consensus 30 ~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~--~~~~w~v~a~f~l~l 102 (522)
T 2f1z_A 30 EATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAES--DSTSWSCHAQAVLKI 102 (522)
T ss_dssp EEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTC--CCSSCBEEEEEEEEE
T ss_pred CCEEEEEECCHHHCCC-----CEECCCEEECCEEEEEEEEECCCCCCCCCCEEEEEEEECCCC--CCCCCEEEEEEEEEE
T ss_conf 7579999899542578-----435799899987469999958878899998699999844888--888806999999999
Q ss_pred EECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf 7189999842530322334799899888789562100111044888843589089999999985414
Q 000550 335 LNQSPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMADFVGHDSGFLVDDTAVFSTSFHVIKEIS 401 (1431)
Q Consensus 335 LNQ~~g~~~~~k~s~~rF~~~~~~~~n~s~G~~kFIs~seL~dp~sGYLvDDSLiIevdI~VIkes~ 401 (1431)
+||.++..+..+...++|.... .+|||.+||++++|.++++|||+||+++|+|+|.|..+++
T Consensus 103 ~n~~~~~~~~~~~~~~~F~~~~-----~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~p~g 164 (522)
T 2f1z_A 103 INYRDDEKSFSRRISHLFFHKE-----NDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADAPHG 164 (522)
T ss_dssp CCTTCGGGCEEEECCEEECGGG-----CEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECCCBS
T ss_pred ECCCCCCCCEECCCEEEECCCC-----CCCCHHHEEEHHHHCCCCCCCCCCCCEEEEEEEECCCCCC
T ss_conf 7588885424314303865899-----9853210467667458666863588579999864146644
No 7
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=1.00 E-value=1 Score=198.50 Aligned_cols=139 Identities=19% Similarity=0.249 Sum_probs=86.7
Q ss_pred CCCEEEEEECCCCCCCC---CCCCCCCCCCCEECC--CEEEEEEEEECCCC--CCCEEEEEEEECCCCCCCCCCCCEEEE
Q ss_conf 57689999916311102---226571129933125--70399999976789--963499999952777665589818999
Q 000550 257 LSGKFTWKVHNFSLFKE---MIKTQKIMSPVFPAG--ECNLRISVYQSSVN--GQEYLSMCLESKDMEKTVVSDRSCWCL 329 (1431)
Q Consensus 257 ~~gsftwkI~NFS~lke---~~k~eki~Sp~F~vg--Gy~WrI~IYPnG~~--~~~yLSIyL~L~d~e~~~~~~wsv~a~ 329 (1431)
..|+|+|+|+|||.+++ .+.+..++|+.|.+| ||+|+|.+||+|.+ .++|||+||++++++++..++|+++++
T Consensus 22 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~v~a~ 101 (178)
T 4gjh_A 22 YSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQR 101 (178)
T ss_dssp SSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSSCCCE
T ss_pred CCEEEEEEECCHHHHHHHHHCCCCCEEECCCEEECCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEE
T ss_conf 14189999998899886632489828989983818999089999997999988898899999981588786669815899
Q ss_pred EEEEEEECCCCCCCEEEC-----CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 999997189999842530-----3223347998998887895621001110448888435890899999999
Q 000550 330 FRMSVLNQSPGSNHMHRD-----SYGRFAADNKSGDNTSLGWNDYMKMADFVGHDSGFLVDDTAVFSTSFHV 396 (1431)
Q Consensus 330 ftlsLLNQ~~g~~~~~k~-----s~~rF~~~~~~~~n~s~G~~kFIs~seL~dp~sGYLvDDSLiIevdI~V 396 (1431)
|+|+|+||..+..++.+. ..++|.++.+ ..+.+|||.+||++++|+++.+|||+||+++|+|+|.+
T Consensus 102 ~~l~Lldq~~~~~~~~~~~~~~~~~~~F~~p~~-~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i 172 (178)
T 4gjh_A 102 VTLMLLDQSGKKNHIVETFKADPNSSSFKRPDG-EMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDL 172 (178)
T ss_dssp EEEEECCTTSSCCCEEEEEECCTTCGGGSCCSS-SBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECC
T ss_pred EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC-CCCCCCCHHHEEEHHHHHCCCCCCCCCCEEEEEEEEEE
T ss_conf 999998079986324886305976431358764-45677073341499996343459691999999999995
No 8
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=1.00 E-value=1 Score=197.99 Aligned_cols=143 Identities=16% Similarity=0.206 Sum_probs=108.1
Q ss_pred CCCCEEEEEECCCCCCCC---CCCCCCCCCCCEECC--CEEEEEEEEECCCC--CCCEEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 457689999916311102---226571129933125--70399999976789--96349999995277766558981899
Q 000550 256 VLSGKFTWKVHNFSLFKE---MIKTQKIMSPVFPAG--ECNLRISVYQSSVN--GQEYLSMCLESKDMEKTVVSDRSCWC 328 (1431)
Q Consensus 256 ~~~gsftwkI~NFS~lke---~~k~eki~Sp~F~vg--Gy~WrI~IYPnG~~--~~~yLSIyL~L~d~e~~~~~~wsv~a 328 (1431)
+.+|+|+|+|+|||.+++ ++.+..++|+.|++| ||+|+|.+||+|.+ .++|||+||++++++++..+.|++++
T Consensus 37 ~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~~~~~~lSlyL~l~~g~~D~~l~wp~~a 116 (198)
T 4ghu_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (198)
T ss_dssp CSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred CCCCEEEEEECCHHHHHHHHCCCCCCEEECCCEEECCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEE
T ss_conf 22538999989978977542148994898998587899928999999699888899869999994377667777963999
Q ss_pred EEEEEEEECCCCCCCEEEC-----CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf 9999997189999842530-----322334799899888789562100111044888843589089999999985414
Q 000550 329 LFRMSVLNQSPGSNHMHRD-----SYGRFAADNKSGDNTSLGWNDYMKMADFVGHDSGFLVDDTAVFSTSFHVIKEIS 401 (1431)
Q Consensus 329 ~ftlsLLNQ~~g~~~~~k~-----s~~rF~~~~~~~~n~s~G~~kFIs~seL~dp~sGYLvDDSLiIevdI~VIkes~ 401 (1431)
+|+|+|+||.++..+..+. ....|+++. ...+.+|||.+||++++|+ ++|||+||+++|+|+|.|+..+.
T Consensus 117 ~~~l~Lldq~~~~~~~~~~~~~~~~~~~f~rp~-~~~~~~wG~~~Fi~~~~L~--~~gyL~dD~l~I~~~V~v~~~~~ 191 (198)
T 4ghu_A 117 KVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPT-GEMNIASGCPVFVAQTVLE--NGTYIKDDTIFIKVIVDTSDLPD 191 (198)
T ss_dssp CEEEEECCCSTTCCCEEEEECCCTTSGGGSCCS-SSBCCCEEEEEEEEHHHHH--HTTSCBTTBEEEEEEECCTTCC-
T ss_pred EEEEEEECCCCCCCCEEEEEECCCCCCEECCCC-CCCCCCCCCHHEEEHHHHH--HCCCEECCEEEEEEEEEECCCCC
T ss_conf 999999828998542378750686631004876-6676873705583899964--36870299899999999656899
No 9
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=1.00 E-value=1 Score=196.42 Aligned_cols=142 Identities=16% Similarity=0.281 Sum_probs=114.6
Q ss_pred CCCCCEEEEEECCCCCCHHHHHCCCCCCCEECCCCEEEC--CCEEEEEEEECCCCCC-CCCEEEEEEECCCCC-CCCCCE
Q ss_conf 887629999994632241211003358934208839983--5059999996799999-992999999706999-999981
Q 000550 422 DGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIG--NRDCRLIVYPRGQSQP-PCHLSVFLEVMDSRN-TSSDWS 497 (1431)
Q Consensus 422 ~~~~~~~twkI~NFS~lke~lk~~k~~Ge~i~S~~F~vG--G~~WRL~iYP~G~~~~-~~yLSIYL~l~d~~~-~~~~Ws 497 (1431)
....++|+|+|+|||.+++.. ..+.|.+++|+.|.+| ||+|+|.+||+|++.+ ++|||+||+|.++.+ ....|+
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~--~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~~~~~~~lSlyL~l~~~~~d~~l~W~ 97 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREA--VEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWP 97 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHH--HTTSCCCEECCCEESSTTSCEEEEEEETTCCGGGTTTEEEEEEEEBCCTTGGGSCSS
T ss_pred CCCCEEEEEEECCHHHHHHHH--HCCCCCEEECCCEEECCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCC
T ss_conf 411418999999889988663--248982898998381899908999999799998889889999998158878666981
Q ss_pred EEEEEEEEEEECCCCCEEEEEC-----CCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 9999999999588996239962-----4433235----676765445335212136989971199999999999980
Q 000550 498 CFVSHRLSVVNQKMEEKSVTKE-----SQNRYSK----AAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILK 565 (1431)
Q Consensus 498 V~a~F~L~LiNq~g~~~Sv~ke-----s~~~Fs~----~~~~WG~~kFIs~sdL~dp~sGYLvdDSLtIeaeV~Vik 565 (1431)
+.++|+|.|+||+++..++.+. ..+.|+. .+.+|||.+||++++|+++++|||+||+++|+|+|.|.+
T Consensus 98 v~a~~~l~Lldq~~~~~~~~~~~~~~~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~ 174 (178)
T 4gjh_A 98 FRQRVTLMLLDQSGKKNHIVETFKADPNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTD 174 (178)
T ss_dssp CCCEEEEEECCTTSSCCCEEEEEECCTTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTT
T ss_pred EEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHCCCCCCCCCCEEEEEEEEEECC
T ss_conf 58999999980799863248863059764313587644567707334149999634345969199999999999567
No 10
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=1.00 E-value=1 Score=194.47 Aligned_cols=134 Identities=26% Similarity=0.466 Sum_probs=102.3
Q ss_pred CCCCCCEEEEEECCCCCCHHHHHCCCCCCCEECCCCEEECCC---EEEEEEEECCCCCC-CCCEEEEEEECCCCCCCCCC
Q ss_conf 788762999999463224121100335893420883998350---59999996799999-99299999970699999998
Q 000550 421 SDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNR---DCRLIVYPRGQSQP-PCHLSVFLEVMDSRNTSSDW 496 (1431)
Q Consensus 421 ~~~~~~~~twkI~NFS~lke~lk~~k~~Ge~i~S~~F~vGG~---~WRL~iYP~G~~~~-~~yLSIYL~l~d~~~~~~~W 496 (1431)
.+...++|+|+|+|||.+++ ..|++++|++|.+||| +|+|.+||+|+..+ ++|||+||+|.+. ..|
T Consensus 6 ~~~~~~~~~w~I~~fs~~~~------~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~~~~~~lSlyL~l~~~----~~w 75 (145)
T 3ivv_A 6 GKVVKFSYMWTINNFSFCRE------EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC----PKS 75 (145)
T ss_dssp CCCCEEEEEEEESSGGGCCC------CTTCCEECCCEEESGGGCEEEEEEEETTCSSGGGTTEEEEEEEEEEC----SSS
T ss_pred CCEEEEEEEEEECCCHHHHH------CCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCC----CCC
T ss_conf 76888999999947147853------69988987996779967833999998199988899869999997379----997
Q ss_pred EEEEEEEEEEEECCCCCEEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 19999999999588996239-9624433235676765445335212136989971199999999999980
Q 000550 497 SCFVSHRLSVVNQKMEEKSV-TKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILK 565 (1431)
Q Consensus 497 sV~a~F~L~LiNq~g~~~Sv-~kes~~~Fs~~~~~WG~~kFIs~sdL~dp~sGYLvdDSLtIeaeV~Vik 565 (1431)
+++|+|+|+|+||+++..+. .....++|+ ...+|||.+||+|++|+++++|||+||+++|+|+|.|++
T Consensus 76 ~v~a~f~l~llnq~~~~~~~~~~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 76 EVRAKFKFSILNAKGEETKAMESQRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EEEEEEEEEEECTTSCEEEEEECSSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CEEEEEEEEEEECCCCCEEEECCCCEEEEC-CCCCCCHHHEEEHHHHCCCCCCCEECCEEEEEEEEEEEE
T ss_conf 299999999993699822136156508822-999858789488646334447848699999999999980
Done!