Query 000553
Match_columns 1428
No_of_seqs 655 out of 5484
Neff 7.7
Searched_HMMs 46136
Date Mon Apr 1 19:02:18 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-260 8E-265 2465.7 139.2 1211 202-1427 122-1376(1381)
2 PLN03130 ABC transporter C fam 100.0 3E-210 7E-215 2124.0 162.5 1398 2-1427 7-1475(1622)
3 TIGR00957 MRP_assoc_pro multi 100.0 1E-209 3E-214 2124.2 165.8 1382 17-1428 23-1522(1522)
4 PLN03232 ABC transporter C fam 100.0 5E-206 1E-210 2086.8 162.4 1399 4-1428 9-1473(1495)
5 TIGR01271 CFTR_protein cystic 100.0 4E-195 9E-200 1974.9 144.8 1206 202-1427 3-1453(1490)
6 PTZ00243 ABC transporter; Prov 100.0 4E-185 9E-190 1875.9 146.2 1221 201-1427 58-1547(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 4E-144 8E-149 1356.7 105.6 1129 268-1427 14-1226(1228)
8 PTZ00265 multidrug resistance 100.0 7E-132 2E-136 1341.5 130.4 1137 269-1426 50-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 5.9E-87 1.3E-91 798.7 56.0 534 886-1426 135-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 3E-78 6.6E-83 757.3 62.1 515 905-1426 160-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.3E-75 2.8E-80 741.9 62.9 515 906-1427 21-565 (567)
12 PRK11174 cysteine/glutathione 100.0 6.1E-74 1.3E-78 730.8 66.0 533 889-1426 13-584 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 5.3E-74 1.1E-78 741.3 62.0 516 903-1423 165-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.9E-73 6.3E-78 735.4 66.6 513 906-1425 143-684 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 7.8E-73 1.7E-77 734.7 63.2 513 907-1423 162-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 1.9E-72 4.1E-77 730.2 63.3 533 886-1424 144-707 (708)
17 PRK10790 putative multidrug tr 100.0 6.5E-72 1.4E-76 712.2 65.7 516 904-1426 28-575 (592)
18 KOG0055 Multidrug/pheromone ex 100.0 8.9E-74 1.9E-78 720.8 46.6 489 937-1426 69-588 (1228)
19 PRK11176 lipid transporter ATP 100.0 1.8E-71 3.9E-76 707.8 64.1 517 906-1426 32-579 (582)
20 TIGR03375 type_I_sec_LssB type 100.0 5.6E-71 1.2E-75 715.0 64.3 507 906-1415 154-690 (694)
21 PRK11160 cysteine/glutathione 100.0 1.2E-70 2.7E-75 695.1 64.5 478 945-1425 66-573 (574)
22 COG2274 SunT ABC-type bacterio 100.0 8.2E-70 1.8E-74 681.3 68.3 543 268-829 143-703 (709)
23 TIGR02203 MsbA_lipidA lipid A 100.0 4.2E-70 9E-75 694.4 64.5 517 906-1426 21-568 (571)
24 COG4987 CydC ABC-type transpor 100.0 1.5E-70 3.3E-75 634.9 54.7 471 949-1424 68-571 (573)
25 KOG0058 Peptide exporter, ABC 100.0 5.2E-70 1.1E-74 652.9 59.4 535 272-824 140-693 (716)
26 KOG0056 Heavy metal exporter H 100.0 3.3E-72 7.2E-77 630.0 37.7 467 952-1425 272-773 (790)
27 COG4988 CydD ABC-type transpor 100.0 5E-70 1.1E-74 643.1 57.7 482 938-1426 39-555 (559)
28 TIGR01846 type_I_sec_HlyB type 100.0 1.3E-69 2.7E-74 701.7 65.7 515 908-1426 148-692 (694)
29 PRK11174 cysteine/glutathione 100.0 3.1E-69 6.8E-74 687.5 68.4 533 270-827 13-577 (588)
30 PRK13657 cyclic beta-1,2-gluca 100.0 3.6E-68 7.8E-73 676.8 67.2 518 904-1427 24-571 (588)
31 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-68 4.5E-73 679.2 64.2 519 907-1426 26-575 (576)
32 TIGR02868 CydC thiol reductant 100.0 2.4E-68 5.1E-73 671.1 59.0 476 906-1385 20-529 (529)
33 KOG0057 Mitochondrial Fe/S clu 100.0 4.1E-68 9E-73 614.7 53.5 477 940-1426 75-586 (591)
34 COG1123 ATPase components of v 100.0 4.6E-69 1E-73 639.0 46.3 475 605-1425 5-531 (539)
35 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.6E-67 1.6E-71 675.6 70.2 537 268-827 125-678 (686)
36 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1E-66 2.3E-71 677.4 70.6 543 271-827 146-705 (710)
37 PRK10789 putative multidrug tr 100.0 1.7E-67 3.6E-72 666.5 60.4 481 941-1425 38-549 (569)
38 TIGR03375 type_I_sec_LssB type 100.0 2.8E-66 6.2E-71 671.1 72.1 535 269-823 137-689 (694)
39 TIGR01192 chvA glucan exporter 100.0 1.5E-66 3.2E-71 658.7 66.5 516 905-1427 25-571 (585)
40 TIGR00958 3a01208 Conjugate Tr 100.0 6.8E-66 1.5E-70 665.9 71.2 535 274-827 156-707 (711)
41 TIGR02857 CydD thiol reductant 100.0 1.7E-66 3.7E-71 654.2 60.4 489 906-1397 10-529 (529)
42 TIGR01193 bacteriocin_ABC ABC- 100.0 4.1E-65 8.8E-70 661.7 70.8 535 272-827 149-702 (708)
43 PRK10261 glutathione transport 100.0 4.6E-67 1E-71 665.7 50.0 492 603-1424 10-565 (623)
44 PRK11176 lipid transporter ATP 100.0 3.4E-64 7.4E-69 640.9 69.1 539 271-828 17-573 (582)
45 TIGR02203 MsbA_lipidA lipid A 100.0 4.4E-64 9.6E-69 639.1 68.3 535 271-824 6-558 (571)
46 COG5265 ATM1 ABC-type transpor 100.0 4.6E-67 9.9E-72 586.9 35.5 461 961-1424 4-496 (497)
47 PTZ00265 multidrug resistance 100.0 3.6E-65 7.9E-70 691.8 61.5 531 891-1426 52-728 (1466)
48 PRK15134 microcin C ABC transp 100.0 2.3E-66 5.1E-71 651.1 44.2 455 605-1416 5-518 (529)
49 TIGR01842 type_I_sec_PrtD type 100.0 2.5E-64 5.3E-69 635.4 62.6 497 907-1413 14-542 (544)
50 PRK13549 xylose transporter AT 100.0 3.1E-66 6.7E-71 646.6 43.1 443 605-1412 5-493 (506)
51 TIGR03269 met_CoM_red_A2 methy 100.0 5.9E-66 1.3E-70 646.6 43.1 437 606-1413 1-517 (520)
52 TIGR02204 MsbA_rel ABC transpo 100.0 3.5E-63 7.6E-68 631.2 68.9 539 269-825 8-566 (576)
53 PRK10790 putative multidrug tr 100.0 4.8E-63 1E-67 630.7 69.1 532 272-829 16-570 (592)
54 PRK09700 D-allose transporter 100.0 1.3E-65 2.9E-70 641.9 44.4 446 605-1410 5-495 (510)
55 TIGR02868 CydC thiol reductant 100.0 4.4E-63 9.5E-68 623.3 67.2 505 272-794 6-529 (529)
56 PRK10762 D-ribose transporter 100.0 2.7E-65 5.9E-70 637.3 42.7 436 605-1412 4-483 (501)
57 TIGR00956 3a01205 Pleiotropic 100.0 1.5E-63 3.3E-68 676.1 60.8 248 1153-1410 718-990 (1394)
58 TIGR01846 type_I_sec_HlyB type 100.0 3.3E-62 7.1E-67 632.6 70.2 541 269-828 129-686 (694)
59 PRK15439 autoinducer 2 ABC tra 100.0 5.7E-65 1.2E-69 634.6 42.5 451 604-1414 10-493 (510)
60 TIGR02633 xylG D-xylose ABC tr 100.0 7.3E-65 1.6E-69 634.2 43.3 447 606-1411 2-490 (500)
61 TIGR01842 type_I_sec_PrtD type 100.0 5.2E-62 1.1E-66 614.2 67.8 520 276-822 3-542 (544)
62 PRK13657 cyclic beta-1,2-gluca 100.0 7.6E-62 1.7E-66 618.8 69.3 532 273-828 13-564 (588)
63 PRK11160 cysteine/glutathione 100.0 7.3E-62 1.6E-66 615.2 68.5 534 273-828 10-568 (574)
64 PRK15064 ABC transporter ATP-b 100.0 1.7E-63 3.8E-68 625.2 52.6 472 606-1415 2-527 (530)
65 PRK11288 araG L-arabinose tran 100.0 1.8E-64 3.9E-69 629.9 42.7 444 605-1413 4-485 (501)
66 PRK10789 putative multidrug tr 100.0 8.6E-62 1.9E-66 614.4 66.2 521 288-827 4-543 (569)
67 PRK10982 galactose/methyl gala 100.0 7.6E-64 1.6E-68 623.2 43.7 435 609-1412 2-479 (491)
68 TIGR01257 rim_protein retinal- 100.0 1.5E-61 3.2E-66 651.0 67.3 220 1189-1414 1935-2160(2272)
69 COG4618 ArpD ABC-type protease 100.0 4.5E-62 9.8E-67 558.5 52.3 530 267-823 11-561 (580)
70 COG1132 MdlB ABC-type multidru 100.0 6E-61 1.3E-65 608.0 67.4 527 277-829 13-559 (567)
71 TIGR02857 CydD thiol reductant 100.0 7.5E-61 1.6E-65 603.0 66.4 507 278-806 2-529 (529)
72 PRK11819 putative ABC transpor 100.0 3.8E-62 8.3E-67 614.8 52.4 479 605-1415 6-535 (556)
73 PRK10938 putative molybdenum t 100.0 3.2E-63 6.9E-68 618.0 41.2 443 605-1406 3-485 (490)
74 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.1E-61 6.8E-66 607.0 58.8 486 907-1405 26-551 (555)
75 COG4988 CydD ABC-type transpor 100.0 2.4E-60 5.1E-65 561.2 62.3 523 285-830 6-551 (559)
76 TIGR01192 chvA glucan exporter 100.0 5.8E-60 1.3E-64 598.5 70.5 532 273-828 13-564 (585)
77 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 9.2E-62 2E-66 611.5 51.7 480 605-1414 4-532 (552)
78 COG4172 ABC-type uncharacteriz 100.0 4.4E-62 9.6E-67 541.8 40.8 460 604-1422 5-525 (534)
79 PLN03232 ABC transporter C fam 100.0 1.9E-60 4E-65 652.8 63.8 522 887-1426 290-840 (1495)
80 PLN03130 ABC transporter C fam 100.0 4.8E-60 1E-64 647.8 64.3 445 964-1426 366-840 (1622)
81 PRK10636 putative ABC transpor 100.0 1.9E-60 4E-65 605.4 52.6 469 606-1413 2-517 (638)
82 PRK10522 multidrug transporter 100.0 2.9E-59 6.3E-64 589.2 59.4 446 952-1413 61-539 (547)
83 TIGR00957 MRP_assoc_pro multi 100.0 2.8E-58 6.1E-63 632.1 67.8 545 268-828 953-1514(1522)
84 KOG0057 Mitochondrial Fe/S clu 100.0 3.3E-58 7.2E-63 532.5 55.8 511 289-824 40-576 (591)
85 PRK11147 ABC transporter ATPas 100.0 5.5E-59 1.2E-63 593.7 51.3 203 1191-1413 319-528 (635)
86 PLN03140 ABC transporter G fam 100.0 2.6E-58 5.7E-63 621.4 53.5 211 1191-1409 867-1106(1470)
87 PLN03073 ABC transporter F fam 100.0 1.2E-57 2.6E-62 579.9 51.8 200 1189-1412 506-713 (718)
88 PTZ00243 ABC transporter; Prov 100.0 1.1E-55 2.3E-60 604.6 68.3 469 349-823 1028-1534(1560)
89 COG4987 CydC ABC-type transpor 100.0 1.8E-55 3.9E-60 509.8 59.2 487 322-828 61-567 (573)
90 COG0488 Uup ATPase components 100.0 3.2E-57 6.9E-62 551.1 45.9 484 605-1415 3-527 (530)
91 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.5E-55 1.4E-59 549.7 62.2 521 273-814 11-551 (555)
92 PRK13409 putative ATPase RIL; 100.0 4E-57 8.6E-62 566.2 38.8 191 1191-1407 340-536 (590)
93 COG4618 ArpD ABC-type protease 100.0 8.7E-56 1.9E-60 506.9 46.2 460 946-1414 70-561 (580)
94 KOG0056 Heavy metal exporter H 100.0 2.5E-56 5.3E-61 502.2 39.1 515 286-824 222-763 (790)
95 KOG0054 Multidrug resistance-a 100.0 1.4E-54 2.9E-59 561.2 60.2 521 888-1425 191-742 (1381)
96 TIGR01271 CFTR_protein cystic 100.0 4.2E-53 9E-58 579.2 67.3 483 339-830 945-1448(1490)
97 PRK10522 multidrug transporter 100.0 2.1E-52 4.6E-57 527.0 63.0 508 269-814 3-530 (547)
98 COG1129 MglA ABC-type sugar tr 100.0 1.6E-54 3.5E-59 512.0 39.7 442 604-1410 7-487 (500)
99 TIGR00954 3a01203 Peroxysomal 100.0 3.8E-53 8.3E-58 540.3 52.7 484 900-1399 97-653 (659)
100 COG3845 ABC-type uncharacteriz 100.0 5.9E-52 1.3E-56 478.2 36.8 446 604-1410 3-489 (501)
101 TIGR00954 3a01203 Peroxysomal 100.0 1.2E-49 2.6E-54 508.3 59.9 515 280-808 97-653 (659)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.6E-52 3.4E-57 478.4 27.4 236 1190-1427 1-238 (275)
103 COG5265 ATM1 ABC-type transpor 100.0 7.8E-50 1.7E-54 448.4 37.7 464 348-828 11-492 (497)
104 PRK14257 phosphate ABC transpo 100.0 5E-49 1.1E-53 461.0 27.5 255 1157-1416 35-316 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 6.1E-46 1.3E-50 386.6 23.1 220 1191-1417 2-229 (240)
106 COG1135 AbcC ABC-type metal io 100.0 1.6E-45 3.4E-50 402.3 21.5 220 1192-1416 2-234 (339)
107 KOG0927 Predicted transporter 100.0 1.4E-44 3E-49 417.2 28.2 196 1191-1408 389-591 (614)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 5.2E-44 1.1E-48 407.8 29.2 238 1188-1425 16-255 (257)
109 COG1117 PstB ABC-type phosphat 100.0 6.7E-45 1.4E-49 376.3 18.8 220 1190-1416 6-240 (253)
110 cd03252 ABCC_Hemolysin The ABC 100.0 5.8E-43 1.3E-47 395.0 27.8 232 1192-1424 1-235 (237)
111 COG1125 OpuBA ABC-type proline 100.0 1.1E-43 2.4E-48 375.8 20.4 223 1192-1421 2-233 (309)
112 PRK14257 phosphate ABC transpo 100.0 1.4E-43 2.9E-48 415.2 22.9 262 528-822 23-313 (329)
113 cd03244 ABCC_MRP_domain2 Domai 100.0 1.3E-42 2.9E-47 387.9 26.5 219 1190-1408 1-221 (221)
114 KOG0062 ATPase component of AB 100.0 6.2E-43 1.3E-47 401.5 23.3 194 1188-1405 359-560 (582)
115 cd03369 ABCC_NFT1 Domain 2 of 100.0 6.8E-42 1.5E-46 378.1 25.6 207 1186-1408 1-207 (207)
116 PRK13631 cbiO cobalt transport 100.0 7E-42 1.5E-46 399.6 26.3 223 1188-1415 18-267 (320)
117 TIGR02314 ABC_MetN D-methionin 100.0 9.4E-42 2E-46 400.0 26.5 223 1192-1419 2-236 (343)
118 cd03251 ABCC_MsbA MsbA is an e 100.0 1.5E-41 3.2E-46 383.0 26.4 230 1192-1422 1-233 (234)
119 cd03254 ABCC_Glucan_exporter_l 100.0 3.1E-41 6.8E-46 379.0 26.8 225 1190-1415 1-228 (229)
120 cd03253 ABCC_ATM1_transporter 100.0 4.6E-41 1E-45 379.4 27.7 232 1192-1425 1-235 (236)
121 COG1120 FepC ABC-type cobalami 100.0 8.4E-42 1.8E-46 376.0 20.7 214 1191-1415 2-230 (258)
122 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.3E-41 2.9E-46 372.2 21.8 210 1191-1415 4-229 (254)
123 KOG0065 Pleiotropic drug resis 100.0 2.6E-40 5.7E-45 416.9 35.8 198 1204-1409 802-1017(1391)
124 COG1126 GlnQ ABC-type polar am 100.0 9.1E-42 2E-46 355.5 18.3 200 605-822 2-225 (240)
125 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8.6E-41 1.9E-45 377.6 26.7 231 1192-1423 1-235 (238)
126 COG3839 MalK ABC-type sugar tr 100.0 4.6E-41 9.9E-46 384.0 24.4 221 1191-1420 3-230 (338)
127 COG1124 DppF ABC-type dipeptid 100.0 7.4E-41 1.6E-45 356.5 23.9 225 1191-1423 3-241 (252)
128 COG1127 Ttg2A ABC-type transpo 100.0 7.6E-41 1.6E-45 353.9 23.2 229 1189-1424 6-246 (263)
129 PRK14250 phosphate ABC transpo 100.0 1.3E-40 2.8E-45 376.4 26.4 226 1191-1424 3-232 (241)
130 COG1122 CbiO ABC-type cobalt t 100.0 6.5E-41 1.4E-45 370.0 22.6 215 1191-1415 3-230 (235)
131 cd03261 ABC_Org_Solvent_Resist 100.0 1.3E-40 2.7E-45 375.4 25.1 217 1192-1415 1-228 (235)
132 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-40 3.7E-45 370.7 25.7 217 1190-1406 1-220 (220)
133 PRK11153 metN DL-methionine tr 100.0 2.4E-40 5.1E-45 391.3 27.3 224 1192-1420 2-237 (343)
134 cd03260 ABC_PstB_phosphate_tra 100.0 9.6E-41 2.1E-45 374.4 21.7 213 1192-1411 1-227 (227)
135 COG1136 SalX ABC-type antimicr 100.0 3.6E-40 7.8E-45 356.2 24.3 208 1192-1404 2-222 (226)
136 PRK13637 cbiO cobalt transport 100.0 3.5E-40 7.6E-45 381.5 25.5 218 1192-1414 3-235 (287)
137 PRK14269 phosphate ABC transpo 100.0 4.7E-40 1E-44 373.1 26.0 219 1191-1416 2-233 (246)
138 PRK11432 fbpC ferric transport 100.0 4.9E-40 1.1E-44 387.6 26.6 223 1189-1420 4-233 (351)
139 cd03263 ABC_subfamily_A The AB 100.0 2.2E-40 4.8E-45 369.7 22.4 214 1192-1411 1-219 (220)
140 PRK13650 cbiO cobalt transport 100.0 4.5E-40 9.8E-45 379.3 25.6 220 1191-1415 4-231 (279)
141 cd03219 ABC_Mj1267_LivG_branch 100.0 2.3E-40 5E-45 373.7 22.7 222 1192-1415 1-234 (236)
142 COG3638 ABC-type phosphate/pho 100.0 2.3E-40 5E-45 349.4 20.5 221 1191-1424 3-245 (258)
143 PRK11650 ugpC glycerol-3-phosp 100.0 5.1E-40 1.1E-44 388.7 25.8 222 1191-1420 3-231 (356)
144 TIGR03265 PhnT2 putative 2-ami 100.0 6E-40 1.3E-44 387.6 26.1 221 1191-1420 4-231 (353)
145 PRK10744 pstB phosphate transp 100.0 6.6E-40 1.4E-44 374.9 25.6 221 1189-1416 11-247 (260)
146 PRK13646 cbiO cobalt transport 100.0 4.6E-40 1E-44 380.6 24.5 219 1191-1414 2-236 (286)
147 cd03296 ABC_CysA_sulfate_impor 100.0 8.1E-40 1.7E-44 369.7 25.6 216 1192-1416 3-229 (239)
148 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.2E-40 1.1E-44 372.0 23.7 226 1192-1423 1-236 (242)
149 TIGR00972 3a0107s01c2 phosphat 100.0 7.5E-40 1.6E-44 371.8 24.8 221 1192-1419 2-238 (247)
150 cd03224 ABC_TM1139_LivF_branch 100.0 4.6E-40 9.9E-45 367.8 22.6 215 1192-1413 1-221 (222)
151 PRK14273 phosphate ABC transpo 100.0 8.2E-40 1.8E-44 373.1 24.9 223 1190-1419 6-244 (254)
152 cd03248 ABCC_TAP TAP, the Tran 100.0 7.4E-40 1.6E-44 367.0 24.0 215 1188-1402 8-226 (226)
153 PRK13643 cbiO cobalt transport 100.0 1E-39 2.2E-44 377.8 25.7 218 1192-1414 2-234 (288)
154 COG2884 FtsE Predicted ATPase 100.0 3.5E-40 7.7E-45 335.4 19.0 207 1192-1408 2-221 (223)
155 cd03258 ABC_MetN_methionine_tr 100.0 5E-40 1.1E-44 370.2 22.3 219 1192-1415 2-232 (233)
156 PRK14242 phosphate transporter 100.0 9.3E-40 2E-44 372.5 24.2 219 1191-1416 6-240 (253)
157 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.2E-40 1.3E-44 374.8 22.7 219 605-830 2-233 (275)
158 PRK13647 cbiO cobalt transport 100.0 1.2E-39 2.5E-44 374.9 25.1 216 1191-1412 4-226 (274)
159 PRK13632 cbiO cobalt transport 100.0 1.3E-39 2.9E-44 374.3 25.6 220 1191-1415 7-233 (271)
160 PRK14259 phosphate ABC transpo 100.0 1.4E-39 2.9E-44 373.6 25.5 223 1187-1416 9-256 (269)
161 cd03256 ABC_PhnC_transporter A 100.0 7.5E-40 1.6E-44 370.8 22.9 215 1192-1413 1-234 (241)
162 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-39 2.6E-44 367.5 24.3 215 1192-1414 2-222 (236)
163 PRK13635 cbiO cobalt transport 100.0 1.7E-39 3.6E-44 374.3 25.7 219 1191-1414 5-230 (279)
164 PRK10851 sulfate/thiosulfate t 100.0 2.2E-39 4.7E-44 382.9 27.3 220 1191-1419 2-232 (353)
165 PRK13537 nodulation ABC transp 100.0 9.5E-40 2.1E-44 380.4 23.8 217 1190-1414 6-228 (306)
166 TIGR01186 proV glycine betaine 100.0 8.6E-40 1.9E-44 385.3 23.5 209 1206-1419 6-225 (363)
167 PRK13636 cbiO cobalt transport 100.0 1.9E-39 4.2E-44 374.8 26.0 218 1191-1414 5-232 (283)
168 PRK11629 lolD lipoprotein tran 100.0 2.3E-39 5.1E-44 364.5 25.9 212 1191-1407 5-228 (233)
169 TIGR02315 ABC_phnC phosphonate 100.0 1.4E-39 3.1E-44 368.9 23.8 220 1192-1412 2-234 (243)
170 PRK14267 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 371.2 23.7 224 1191-1421 4-245 (253)
171 PRK13634 cbiO cobalt transport 100.0 1.5E-39 3.3E-44 376.7 24.5 218 1192-1414 3-236 (290)
172 PRK14235 phosphate transporter 100.0 2.4E-39 5.1E-44 371.4 25.6 222 1188-1416 16-254 (267)
173 COG3842 PotA ABC-type spermidi 100.0 8.2E-40 1.8E-44 375.6 21.3 218 1190-1420 4-233 (352)
174 TIGR03258 PhnT 2-aminoethylpho 100.0 1.5E-39 3.2E-44 384.7 24.1 223 1189-1420 3-235 (362)
175 COG1135 AbcC ABC-type metal io 100.0 4.6E-40 1E-44 359.5 18.1 205 606-822 2-231 (339)
176 TIGR00960 3a0501s02 Type II (G 100.0 1.2E-39 2.5E-44 362.8 21.7 202 1192-1402 2-216 (216)
177 PRK14247 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 368.0 25.1 226 1191-1423 3-244 (250)
178 cd03259 ABC_Carb_Solutes_like 100.0 1E-39 2.2E-44 362.5 20.6 206 1192-1406 1-213 (213)
179 COG1116 TauB ABC-type nitrate/ 100.0 8.3E-40 1.8E-44 352.5 19.2 191 605-812 3-212 (248)
180 PRK13651 cobalt transporter AT 100.0 3.6E-39 7.7E-44 374.8 26.0 219 1191-1414 2-255 (305)
181 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 9.4E-40 2E-44 364.1 20.3 206 1192-1402 1-218 (218)
182 PRK13642 cbiO cobalt transport 100.0 3.4E-39 7.3E-44 371.9 25.3 220 1191-1415 4-231 (277)
183 PRK15079 oligopeptide ABC tran 100.0 2.3E-39 5.1E-44 379.8 24.2 226 1191-1421 8-259 (331)
184 TIGR03411 urea_trans_UrtD urea 100.0 2.8E-39 6.1E-44 366.2 23.9 220 1191-1413 2-231 (242)
185 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-39 3.3E-44 366.0 21.6 216 1192-1414 1-223 (232)
186 PRK09452 potA putrescine/sperm 100.0 4.7E-39 1E-43 381.7 26.5 221 1190-1419 13-240 (375)
187 PRK11831 putative ABC transpor 100.0 2.7E-39 6E-44 371.3 23.8 227 1191-1424 7-244 (269)
188 PRK11264 putative amino-acid A 100.0 7.5E-39 1.6E-43 364.5 27.1 227 1191-1424 3-245 (250)
189 PRK10619 histidine/lysine/argi 100.0 9.7E-39 2.1E-43 364.8 28.1 221 1189-1416 3-244 (257)
190 COG1116 TauB ABC-type nitrate/ 100.0 3.1E-39 6.7E-44 348.1 22.5 196 1191-1402 3-211 (248)
191 PRK14251 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 368.3 23.5 223 1191-1420 4-242 (251)
192 PRK09493 glnQ glutamine ABC tr 100.0 5.1E-39 1.1E-43 363.5 25.5 217 1192-1415 2-227 (240)
193 PRK14237 phosphate transporter 100.0 4.8E-39 1E-43 368.9 25.5 220 1190-1416 19-254 (267)
194 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.3E-38 2.8E-43 365.3 29.0 217 1189-1423 37-256 (282)
195 cd03247 ABCC_cytochrome_bd The 100.0 2.4E-39 5.2E-44 348.8 21.6 178 1192-1406 1-178 (178)
196 cd03266 ABC_NatA_sodium_export 100.0 2E-39 4.3E-44 361.6 21.5 209 1192-1406 2-218 (218)
197 PRK11000 maltose/maltodextrin 100.0 3.5E-39 7.6E-44 384.2 25.1 220 1191-1419 3-229 (369)
198 TIGR02211 LolD_lipo_ex lipopro 100.0 2.5E-39 5.5E-44 361.5 22.4 207 1192-1403 2-220 (221)
199 PRK11308 dppF dipeptide transp 100.0 1E-38 2.2E-43 374.2 28.4 226 1191-1421 5-252 (327)
200 PRK14245 phosphate ABC transpo 100.0 3.3E-39 7.1E-44 367.3 23.5 220 1191-1417 3-238 (250)
201 TIGR03005 ectoine_ehuA ectoine 100.0 7.5E-39 1.6E-43 364.8 26.4 218 1192-1416 1-239 (252)
202 PRK13640 cbiO cobalt transport 100.0 4.6E-39 1E-43 371.5 25.0 220 1190-1414 4-233 (282)
203 PRK13649 cbiO cobalt transport 100.0 4.6E-39 1E-43 372.0 24.4 218 1192-1414 3-235 (280)
204 PRK14240 phosphate transporter 100.0 4.9E-39 1.1E-43 365.9 24.3 220 1190-1416 2-237 (250)
205 cd03250 ABCC_MRP_domain1 Domai 100.0 4.8E-39 1E-43 354.5 23.5 197 1192-1401 1-204 (204)
206 PRK13648 cbiO cobalt transport 100.0 6.3E-39 1.4E-43 368.5 25.4 219 1191-1414 7-232 (269)
207 PRK14268 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 367.6 24.0 223 1190-1419 11-248 (258)
208 PRK13645 cbiO cobalt transport 100.0 4.7E-39 1E-43 373.2 24.5 221 1189-1414 4-241 (289)
209 PRK14262 phosphate ABC transpo 100.0 4.3E-39 9.3E-44 366.4 23.6 226 1191-1423 3-244 (250)
210 PRK14244 phosphate ABC transpo 100.0 3.5E-39 7.6E-44 367.2 22.8 221 1192-1419 6-243 (251)
211 PRK14248 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 368.7 24.9 220 1190-1416 20-255 (268)
212 PRK14239 phosphate transporter 100.0 5.4E-39 1.2E-43 366.2 24.3 219 1191-1416 5-239 (252)
213 PRK09536 btuD corrinoid ABC tr 100.0 6E-39 1.3E-43 382.5 25.7 220 1191-1423 3-236 (402)
214 TIGR02769 nickel_nikE nickel i 100.0 8.1E-39 1.8E-43 366.8 25.9 228 1191-1423 2-250 (265)
215 PRK14238 phosphate transporter 100.0 1E-38 2.3E-43 366.6 26.6 221 1189-1416 22-258 (271)
216 PRK14274 phosphate ABC transpo 100.0 7.2E-39 1.6E-43 366.2 25.0 221 1191-1418 12-248 (259)
217 cd03264 ABC_drug_resistance_li 100.0 4.5E-39 9.8E-44 356.8 22.5 202 1192-1406 1-211 (211)
218 PRK14256 phosphate ABC transpo 100.0 7.4E-39 1.6E-43 364.8 24.8 222 1189-1417 2-240 (252)
219 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6E-39 1.3E-43 368.2 24.2 221 1193-1420 26-257 (269)
220 PRK13652 cbiO cobalt transport 100.0 9.5E-39 2.1E-43 368.2 25.8 218 1191-1414 3-228 (277)
221 cd03225 ABC_cobalt_CbiO_domain 100.0 3.8E-39 8.2E-44 357.4 21.6 204 1193-1401 1-211 (211)
222 PRK11614 livF leucine/isoleuci 100.0 6.1E-39 1.3E-43 362.2 23.6 217 1191-1414 5-227 (237)
223 PRK13644 cbiO cobalt transport 100.0 9.1E-39 2E-43 367.5 25.3 217 1192-1414 2-225 (274)
224 PRK10895 lipopolysaccharide AB 100.0 6.3E-39 1.4E-43 363.0 23.6 217 1191-1414 3-227 (241)
225 PRK11607 potG putrescine trans 100.0 1.2E-38 2.6E-43 378.9 27.1 223 1189-1420 17-246 (377)
226 cd03265 ABC_DrrA DrrA is the A 100.0 4.4E-39 9.6E-44 359.1 22.0 212 1192-1411 1-219 (220)
227 PRK11124 artP arginine transpo 100.0 1.3E-38 2.7E-43 360.8 26.0 219 1191-1416 2-233 (242)
228 PRK11022 dppD dipeptide transp 100.0 6.3E-39 1.4E-43 376.1 24.0 226 1191-1421 3-251 (326)
229 PRK13641 cbiO cobalt transport 100.0 9.2E-39 2E-43 370.0 25.1 219 1191-1414 2-235 (287)
230 PRK14249 phosphate ABC transpo 100.0 8.9E-39 1.9E-43 363.9 24.6 220 1190-1416 3-238 (251)
231 PRK14260 phosphate ABC transpo 100.0 6.9E-39 1.5E-43 366.3 23.7 221 1190-1417 6-247 (259)
232 PRK14270 phosphate ABC transpo 100.0 1E-38 2.3E-43 363.4 25.0 219 1190-1415 3-237 (251)
233 TIGR03410 urea_trans_UrtE urea 100.0 4.2E-39 9.1E-44 361.9 21.4 211 1192-1412 1-220 (230)
234 TIGR01288 nodI ATP-binding ABC 100.0 9.1E-39 2E-43 372.9 24.8 216 1191-1414 4-225 (303)
235 PRK14266 phosphate ABC transpo 100.0 9.4E-39 2E-43 363.6 24.2 223 1191-1420 3-241 (250)
236 PRK14236 phosphate transporter 100.0 1.4E-38 3E-43 366.0 25.9 222 1188-1416 22-259 (272)
237 PRK09473 oppD oligopeptide tra 100.0 1.9E-38 4E-43 372.4 27.2 226 1191-1421 12-259 (330)
238 cd03257 ABC_NikE_OppD_transpor 100.0 6.1E-39 1.3E-43 360.3 22.1 211 1192-1406 2-228 (228)
239 PRK14261 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 363.7 24.4 226 1191-1423 6-247 (253)
240 cd03226 ABC_cobalt_CbiO_domain 100.0 5.3E-39 1.1E-43 354.5 21.2 198 1193-1403 1-205 (205)
241 PRK13633 cobalt transporter AT 100.0 1.3E-38 2.8E-43 367.7 25.1 219 1191-1414 4-234 (280)
242 PRK14254 phosphate ABC transpo 100.0 1.6E-38 3.6E-43 366.9 25.8 221 1189-1416 37-272 (285)
243 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.1E-39 1.1E-43 358.6 20.6 207 1192-1408 1-218 (220)
244 PRK13536 nodulation factor exp 100.0 1E-38 2.2E-43 375.3 24.0 216 1191-1414 41-262 (340)
245 PRK14243 phosphate transporter 100.0 1.6E-38 3.6E-43 363.8 25.1 219 1191-1416 10-251 (264)
246 PRK14252 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 364.5 25.0 223 1186-1415 11-251 (265)
247 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-38 2.4E-43 371.5 24.0 215 1192-1414 3-222 (301)
248 cd03268 ABC_BcrA_bacitracin_re 100.0 8.3E-39 1.8E-43 353.8 21.8 202 1192-1406 1-208 (208)
249 cd03301 ABC_MalK_N The N-termi 100.0 7.4E-39 1.6E-43 355.7 21.4 206 1192-1406 1-213 (213)
250 COG1125 OpuBA ABC-type proline 100.0 2.2E-39 4.7E-44 343.3 16.1 203 606-824 2-227 (309)
251 PRK14271 phosphate ABC transpo 100.0 5.9E-38 1.3E-42 360.9 29.4 219 1191-1416 21-254 (276)
252 cd03292 ABC_FtsE_transporter F 100.0 7.4E-39 1.6E-43 355.9 20.9 205 1192-1402 1-214 (214)
253 PRK11231 fecE iron-dicitrate t 100.0 1.3E-38 2.9E-43 363.2 23.4 216 1192-1414 3-228 (255)
254 PRK11701 phnK phosphonate C-P 100.0 3.8E-38 8.2E-43 360.1 27.1 225 1191-1422 6-250 (258)
255 PRK10575 iron-hydroxamate tran 100.0 1.3E-38 2.9E-43 365.0 23.4 213 1191-1414 11-238 (265)
256 TIGR00968 3a0106s01 sulfate AB 100.0 2E-38 4.3E-43 357.6 24.3 215 1192-1415 1-222 (237)
257 PRK10070 glycine betaine trans 100.0 1.7E-38 3.6E-43 378.5 25.0 208 1207-1419 42-260 (400)
258 PRK13639 cbiO cobalt transport 100.0 2.2E-38 4.9E-43 364.7 25.1 217 1192-1414 2-227 (275)
259 cd03246 ABCC_Protease_Secretio 100.0 1.4E-38 3.1E-43 341.1 21.5 172 1192-1402 1-173 (173)
260 PRK13638 cbiO cobalt transport 100.0 1.8E-38 3.9E-43 365.1 23.8 217 1192-1415 2-227 (271)
261 COG4615 PvdE ABC-type sideroph 100.0 5.7E-36 1.2E-40 332.4 42.4 453 940-1405 49-529 (546)
262 COG3840 ThiQ ABC-type thiamine 100.0 1.7E-38 3.7E-43 320.0 20.3 211 1192-1417 2-223 (231)
263 PRK10253 iron-enterobactin tra 100.0 1.8E-38 4E-43 363.8 23.4 217 1190-1414 6-234 (265)
264 PRK14272 phosphate ABC transpo 100.0 2.2E-38 4.9E-43 361.1 24.0 224 1191-1421 4-244 (252)
265 PRK14241 phosphate transporter 100.0 2.1E-38 4.7E-43 362.1 23.9 219 1191-1416 4-245 (258)
266 TIGR03415 ABC_choXWV_ATP choli 100.0 1.9E-38 4.1E-43 375.3 24.1 209 1207-1420 38-261 (382)
267 PRK14275 phosphate ABC transpo 100.0 2.2E-38 4.9E-43 366.3 24.2 225 1189-1420 37-277 (286)
268 PRK14253 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 359.8 24.2 219 1191-1416 3-236 (249)
269 PRK11300 livG leucine/isoleuci 100.0 2.5E-38 5.3E-43 361.4 24.1 220 1191-1414 5-244 (255)
270 COG4178 ABC-type uncharacteriz 100.0 7.1E-36 1.5E-40 360.1 46.5 466 912-1399 56-588 (604)
271 PRK13548 hmuV hemin importer A 100.0 3.2E-38 6.9E-43 360.2 24.7 217 1191-1414 2-231 (258)
272 PRK14263 phosphate ABC transpo 100.0 3.1E-38 6.6E-43 360.5 24.6 223 1191-1420 8-252 (261)
273 PRK14265 phosphate ABC transpo 100.0 3.2E-38 6.9E-43 363.0 24.7 221 1189-1416 18-261 (274)
274 PRK14264 phosphate ABC transpo 100.0 3.2E-38 6.9E-43 368.1 24.8 220 1189-1415 43-291 (305)
275 PRK10584 putative ABC transpor 100.0 2.7E-38 5.9E-43 354.8 23.2 211 1190-1405 5-227 (228)
276 PRK11247 ssuB aliphatic sulfon 100.0 3.8E-38 8.3E-43 357.8 24.6 204 1190-1409 11-219 (257)
277 cd03269 ABC_putative_ATPase Th 100.0 1.1E-38 2.4E-43 353.4 19.6 204 1192-1406 1-210 (210)
278 cd03300 ABC_PotA_N PotA is an 100.0 2.9E-38 6.3E-43 355.3 23.2 216 1192-1416 1-223 (232)
279 PRK15112 antimicrobial peptide 100.0 6.7E-38 1.5E-42 359.4 26.6 225 1191-1424 4-251 (267)
280 TIGR02673 FtsE cell division A 100.0 1.5E-38 3.3E-43 353.4 20.6 200 1192-1401 2-214 (214)
281 PRK14258 phosphate ABC transpo 100.0 4.2E-38 9.1E-43 360.1 24.7 221 1190-1417 6-249 (261)
282 PRK10908 cell division protein 100.0 5.3E-38 1.1E-42 351.0 24.8 207 1192-1404 2-217 (222)
283 PRK15093 antimicrobial peptide 100.0 3.2E-38 6.9E-43 371.5 24.0 226 1191-1421 3-256 (330)
284 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.6E-38 7.7E-43 349.6 23.0 200 1192-1406 1-211 (211)
285 COG1120 FepC ABC-type cobalami 100.0 1.3E-38 2.9E-43 350.7 19.3 201 605-822 2-228 (258)
286 PRK14255 phosphate ABC transpo 100.0 4.1E-38 8.9E-43 358.8 24.0 222 1191-1419 5-242 (252)
287 cd03290 ABCC_SUR1_N The SUR do 100.0 4.5E-38 9.8E-43 350.5 23.5 208 1193-1401 2-218 (218)
288 COG1131 CcmA ABC-type multidru 100.0 2.1E-38 4.5E-43 365.5 21.4 213 1191-1414 4-227 (293)
289 TIGR03873 F420-0_ABC_ATP propo 100.0 4.8E-38 1E-42 358.8 23.9 214 1192-1413 2-226 (256)
290 cd03262 ABC_HisP_GlnQ_permease 100.0 4.5E-38 9.7E-43 349.4 22.6 204 1192-1402 1-213 (213)
291 PRK14246 phosphate ABC transpo 100.0 1.1E-37 2.5E-42 355.1 26.4 227 1190-1423 9-251 (257)
292 PRK10247 putative ABC transpor 100.0 3.9E-38 8.5E-43 352.4 22.1 211 1191-1409 7-223 (225)
293 cd03299 ABC_ModC_like Archeal 100.0 1.2E-37 2.7E-42 350.7 26.1 214 1192-1415 1-221 (235)
294 cd03235 ABC_Metallic_Cations A 100.0 2.3E-38 5E-43 351.6 19.9 201 1193-1406 1-213 (213)
295 cd03250 ABCC_MRP_domain1 Domai 100.0 4.8E-38 1E-42 346.6 22.3 204 606-810 1-204 (204)
296 COG1118 CysA ABC-type sulfate/ 100.0 1.7E-38 3.8E-43 346.0 18.3 220 1191-1419 2-233 (345)
297 PRK10771 thiQ thiamine transpo 100.0 1.2E-37 2.7E-42 350.3 25.6 209 1192-1415 2-221 (232)
298 COG0410 LivF ABC-type branched 100.0 7E-38 1.5E-42 331.7 22.0 220 1191-1416 3-229 (237)
299 TIGR01188 drrA daunorubicin re 100.0 3.8E-38 8.3E-43 367.4 21.9 207 1200-1414 2-214 (302)
300 PRK13547 hmuV hemin importer A 100.0 7.4E-38 1.6E-42 358.5 23.7 220 1192-1413 2-244 (272)
301 PRK10418 nikD nickel transport 100.0 1.9E-37 4E-42 353.4 25.6 221 1191-1425 4-243 (254)
302 COG1127 Ttg2A ABC-type transpo 100.0 6.7E-38 1.5E-42 331.6 20.0 204 603-824 6-237 (263)
303 COG3840 ThiQ ABC-type thiamine 100.0 3.5E-38 7.6E-43 317.7 16.8 199 606-823 2-220 (231)
304 COG4555 NatA ABC-type Na+ tran 100.0 1.6E-38 3.5E-43 325.7 14.6 217 1192-1415 2-224 (245)
305 TIGR01978 sufC FeS assembly AT 100.0 8.7E-38 1.9E-42 354.4 22.2 215 1192-1413 1-234 (243)
306 COG3839 MalK ABC-type sugar tr 100.0 5.8E-38 1.3E-42 358.5 20.6 203 605-824 3-225 (338)
307 PRK10419 nikE nickel transport 100.0 1.5E-37 3.3E-42 356.4 24.0 231 1191-1424 3-251 (268)
308 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.2E-37 7E-42 353.7 25.8 213 601-822 35-247 (282)
309 PRK11248 tauB taurine transpor 100.0 1.3E-37 2.9E-42 354.1 22.4 205 1192-1408 2-215 (255)
310 cd03234 ABCG_White The White s 100.0 8.5E-38 1.8E-42 350.2 20.5 212 1192-1406 4-226 (226)
311 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.6E-37 3.4E-42 340.2 21.8 200 604-822 3-227 (254)
312 COG1136 SalX ABC-type antimicr 100.0 1.3E-37 2.9E-42 336.3 20.9 195 606-812 2-221 (226)
313 TIGR02323 CP_lyasePhnK phospho 100.0 2.5E-37 5.4E-42 352.6 24.4 226 1191-1423 3-248 (253)
314 PRK11144 modC molybdate transp 100.0 2.3E-37 4.9E-42 367.2 25.0 212 1192-1417 2-222 (352)
315 TIGR01277 thiQ thiamine ABC tr 100.0 2.1E-37 4.6E-42 343.7 22.8 201 1192-1407 1-212 (213)
316 TIGR02142 modC_ABC molybdenum 100.0 2.3E-37 4.9E-42 367.8 24.1 215 1196-1419 4-227 (354)
317 PRK09984 phosphonate/organopho 100.0 3E-37 6.6E-42 353.5 24.3 224 1191-1424 4-250 (262)
318 COG1137 YhbG ABC-type (unclass 100.0 1.6E-38 3.4E-43 325.4 12.1 225 1190-1416 3-231 (243)
319 TIGR02982 heterocyst_DevA ABC 100.0 1.4E-37 3.1E-42 346.9 20.6 206 1192-1402 2-219 (220)
320 COG1117 PstB ABC-type phosphat 100.0 5E-38 1.1E-42 325.4 15.2 205 603-822 5-237 (253)
321 cd03252 ABCC_Hemolysin The ABC 100.0 5.2E-37 1.1E-41 346.6 23.7 212 606-823 1-226 (237)
322 PRK00349 uvrA excinuclease ABC 100.0 2E-36 4.4E-41 389.7 31.9 226 1191-1423 614-937 (943)
323 COG1118 CysA ABC-type sulfate/ 100.0 1.2E-37 2.7E-42 339.3 17.5 201 606-824 3-229 (345)
324 COG3842 PotA ABC-type spermidi 100.0 1.2E-37 2.6E-42 357.8 18.2 204 604-824 4-228 (352)
325 cd03228 ABCC_MRP_Like The MRP 100.0 4E-37 8.8E-42 329.2 21.1 171 1192-1401 1-171 (171)
326 TIGR03740 galliderm_ABC gallid 100.0 6.3E-37 1.4E-41 342.5 22.5 204 1192-1410 1-210 (223)
327 COG0444 DppD ABC-type dipeptid 100.0 1.5E-36 3.2E-41 338.3 24.6 224 1192-1423 2-253 (316)
328 cd03254 ABCC_Glucan_exporter_l 100.0 1.2E-36 2.5E-41 341.9 23.9 211 605-822 2-226 (229)
329 cd03230 ABC_DR_subfamily_A Thi 100.0 7.5E-37 1.6E-41 327.8 20.9 170 1192-1402 1-173 (173)
330 cd03288 ABCC_SUR2 The SUR doma 100.0 1.7E-36 3.7E-41 346.0 25.1 214 603-822 17-243 (257)
331 cd03217 ABC_FeS_Assembly ABC-t 100.0 1E-36 2.2E-41 334.4 22.3 185 1192-1412 1-192 (200)
332 cd03297 ABC_ModC_molybdenum_tr 100.0 7.7E-37 1.7E-41 339.6 21.5 203 1193-1406 3-214 (214)
333 COG1122 CbiO ABC-type cobalt t 100.0 4.1E-37 8.9E-42 339.9 19.0 203 605-823 3-229 (235)
334 cd03229 ABC_Class3 This class 100.0 9.7E-37 2.1E-41 328.5 21.3 172 1192-1401 1-178 (178)
335 cd03244 ABCC_MRP_domain2 Domai 100.0 1.7E-36 3.8E-41 338.6 23.6 206 605-816 2-220 (221)
336 PRK09544 znuC high-affinity zi 100.0 2E-36 4.3E-41 343.1 23.8 209 1191-1424 4-218 (251)
337 cd03233 ABC_PDR_domain1 The pl 100.0 1.3E-36 2.7E-41 334.1 21.2 190 1191-1406 3-202 (202)
338 cd03251 ABCC_MsbA MsbA is an e 100.0 2.3E-36 4.9E-41 340.8 23.8 212 606-823 1-226 (234)
339 PRK15056 manganese/iron transp 100.0 2.3E-36 5E-41 347.7 23.6 209 1191-1413 6-230 (272)
340 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.1E-36 6.7E-41 340.5 23.5 211 607-822 2-226 (238)
341 cd03215 ABC_Carb_Monos_II This 100.0 1.3E-36 2.9E-41 328.6 19.5 172 1191-1402 4-182 (182)
342 cd03253 ABCC_ATM1_transporter 100.0 3.6E-36 7.8E-41 339.5 23.8 210 606-822 1-224 (236)
343 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-36 3.4E-41 331.2 20.1 182 1191-1406 3-194 (194)
344 COG1124 DppF ABC-type dipeptid 100.0 1.7E-36 3.8E-41 323.1 19.6 207 605-823 3-232 (252)
345 COG3638 ABC-type phosphate/pho 100.0 1.1E-36 2.5E-41 321.5 17.5 203 604-822 2-237 (258)
346 CHL00131 ycf16 sulfate ABC tra 100.0 4E-36 8.6E-41 342.6 23.5 217 1191-1411 7-239 (252)
347 cd03214 ABC_Iron-Siderophores_ 100.0 1.8E-36 4E-41 326.9 19.5 177 1193-1406 1-180 (180)
348 cd03232 ABC_PDR_domain2 The pl 100.0 1.7E-36 3.6E-41 330.6 19.3 181 1191-1406 3-192 (192)
349 TIGR03608 L_ocin_972_ABC putat 100.0 2.4E-36 5.1E-41 333.8 20.8 197 1194-1397 1-206 (206)
350 PRK03695 vitamin B12-transport 100.0 3.3E-36 7.2E-41 341.6 22.3 210 1193-1414 2-223 (248)
351 cd03223 ABCD_peroxisomal_ALDP 100.0 3E-36 6.6E-41 320.4 20.5 164 1192-1401 1-164 (166)
352 TIGR01186 proV glycine betaine 100.0 1.2E-36 2.6E-41 358.7 18.9 188 625-823 7-220 (363)
353 COG1123 ATPase components of v 100.0 5.2E-36 1.1E-40 357.1 24.1 227 1191-1422 5-253 (539)
354 TIGR02770 nickel_nikD nickel i 100.0 3.5E-36 7.7E-41 337.9 21.6 206 1208-1421 1-223 (230)
355 PRK11650 ugpC glycerol-3-phosp 100.0 3.8E-36 8.1E-41 355.8 22.3 202 605-823 3-225 (356)
356 cd03245 ABCC_bacteriocin_expor 100.0 8.4E-36 1.8E-40 332.9 23.6 205 605-815 2-220 (220)
357 PRK09580 sufC cysteine desulfu 100.0 6.1E-36 1.3E-40 340.3 22.7 215 1192-1411 2-233 (248)
358 COG1245 Predicted ATPase, RNas 100.0 1.4E-35 3.1E-40 335.1 25.2 176 1215-1412 363-546 (591)
359 PRK13631 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 350.3 22.5 210 602-823 18-266 (320)
360 TIGR02314 ABC_MetN D-methionin 100.0 3.9E-36 8.4E-41 352.6 20.8 203 606-822 2-230 (343)
361 COG0411 LivG ABC-type branched 100.0 2.4E-36 5.1E-41 322.5 16.7 222 1191-1416 4-242 (250)
362 TIGR01184 ntrCD nitrate transp 100.0 3.3E-36 7.1E-41 337.9 18.5 194 1209-1412 1-203 (230)
363 cd03267 ABC_NatA_like Similar 100.0 5.1E-36 1.1E-40 337.7 19.8 195 1206-1406 34-236 (236)
364 PRK00635 excinuclease ABC subu 100.0 6E-35 1.3E-39 388.7 33.1 211 1191-1414 600-907 (1809)
365 COG4619 ABC-type uncharacteriz 100.0 2.3E-36 5E-41 300.3 14.5 197 1200-1404 10-214 (223)
366 COG4178 ABC-type uncharacteriz 100.0 1.6E-32 3.5E-37 331.2 50.1 452 338-808 105-588 (604)
367 COG4615 PvdE ABC-type sideroph 100.0 3.5E-33 7.5E-38 310.3 40.7 506 269-814 3-529 (546)
368 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-35 2.9E-40 330.6 21.8 199 607-810 2-218 (218)
369 PRK11432 fbpC ferric transport 100.0 1.2E-35 2.6E-40 350.4 22.4 201 604-822 5-226 (351)
370 PRK15439 autoinducer 2 ABC tra 100.0 2.5E-35 5.5E-40 368.2 26.4 215 1191-1413 11-229 (510)
371 PRK13549 xylose transporter AT 100.0 1.3E-35 2.9E-40 371.0 23.8 216 1191-1413 5-232 (506)
372 COG4175 ProV ABC-type proline/ 100.0 1.3E-35 2.9E-40 323.0 20.2 218 1191-1417 4-258 (386)
373 TIGR00630 uvra excinuclease AB 100.0 1.3E-34 2.8E-39 372.5 32.8 214 1191-1411 612-923 (924)
374 PRK13538 cytochrome c biogenes 100.0 1.4E-35 3.1E-40 326.7 20.2 194 1192-1397 2-202 (204)
375 PRK09700 D-allose transporter 100.0 2E-35 4.4E-40 369.9 24.1 216 1191-1413 5-234 (510)
376 cd03216 ABC_Carb_Monos_I This 100.0 3.2E-35 6.9E-40 311.6 21.7 159 1192-1404 1-162 (163)
377 PRK10762 D-ribose transporter 100.0 2.2E-35 4.7E-40 368.6 23.9 216 1191-1413 4-230 (501)
378 cd03261 ABC_Org_Solvent_Resist 100.0 1.7E-35 3.7E-40 333.7 20.4 198 607-822 2-226 (235)
379 PRK09452 potA putrescine/sperm 100.0 2.5E-35 5.3E-40 349.9 22.5 203 603-823 12-235 (375)
380 PRK13643 cbiO cobalt transport 100.0 2.3E-35 5E-40 341.5 21.1 205 606-822 2-233 (288)
381 cd03231 ABC_CcmA_heme_exporter 100.0 4.1E-35 8.8E-40 322.2 21.9 194 1192-1397 1-198 (201)
382 PRK13634 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 341.3 21.4 205 606-822 3-235 (290)
383 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-35 5.5E-40 348.4 21.1 202 605-823 4-225 (353)
384 PRK13650 cbiO cobalt transport 100.0 2.8E-35 6E-40 339.5 20.9 204 605-823 4-230 (279)
385 PRK13637 cbiO cobalt transport 100.0 3.2E-35 7E-40 340.1 21.4 207 605-822 2-234 (287)
386 PRK10261 glutathione transport 100.0 4.2E-35 9E-40 373.3 24.2 222 1190-1416 11-261 (623)
387 COG2884 FtsE Predicted ATPase 100.0 1.9E-35 4.1E-40 301.0 16.6 193 606-815 2-219 (223)
388 PRK13646 cbiO cobalt transport 100.0 3.8E-35 8.2E-40 339.6 21.4 206 605-822 2-235 (286)
389 PRK10851 sulfate/thiosulfate t 100.0 5.1E-35 1.1E-39 345.8 22.3 201 605-823 2-227 (353)
390 PRK10982 galactose/methyl gala 100.0 5.6E-35 1.2E-39 364.2 23.9 212 1194-1412 1-222 (491)
391 PRK11288 araG L-arabinose tran 100.0 6.3E-35 1.4E-39 364.4 24.0 211 1191-1408 4-224 (501)
392 PRK13540 cytochrome c biogenes 100.0 4.7E-35 1E-39 321.6 20.0 193 1192-1396 2-198 (200)
393 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.8E-35 2.1E-39 321.0 22.5 189 604-816 5-206 (207)
394 PRK13651 cobalt transporter AT 100.0 5.5E-35 1.2E-39 339.7 21.5 206 605-822 2-254 (305)
395 TIGR03258 PhnT 2-aminoethylpho 100.0 4.1E-35 8.9E-40 346.9 20.8 202 604-823 4-229 (362)
396 KOG0066 eIF2-interacting prote 100.0 1.6E-35 3.4E-40 329.8 16.1 196 1191-1409 586-787 (807)
397 PRK11000 maltose/maltodextrin 100.0 5E-35 1.1E-39 348.6 21.5 200 605-822 3-223 (369)
398 cd03296 ABC_CysA_sulfate_impor 100.0 7.9E-35 1.7E-39 329.0 22.0 198 606-821 3-225 (239)
399 PRK15134 microcin C ABC transp 100.0 2E-34 4.3E-39 362.3 27.7 221 1191-1416 5-249 (529)
400 COG4559 ABC-type hemin transpo 100.0 5.9E-35 1.3E-39 301.8 18.7 213 1192-1415 2-232 (259)
401 cd03248 ABCC_TAP TAP, the Tran 100.0 9.7E-35 2.1E-39 325.6 22.1 205 602-811 8-226 (226)
402 cd03260 ABC_PstB_phosphate_tra 100.0 4.6E-35 9.9E-40 328.5 19.4 197 606-819 1-226 (227)
403 PRK13647 cbiO cobalt transport 100.0 6.4E-35 1.4E-39 335.6 20.4 199 605-820 4-225 (274)
404 PRK13543 cytochrome c biogenes 100.0 1E-34 2.2E-39 322.3 21.3 195 1191-1399 11-212 (214)
405 PRK14269 phosphate ABC transpo 100.0 9E-35 1.9E-39 329.9 21.3 203 605-822 2-230 (246)
406 cd03259 ABC_Carb_Solutes_like 100.0 5.5E-35 1.2E-39 324.5 19.0 191 607-815 2-213 (213)
407 TIGR01257 rim_protein retinal- 100.0 8.6E-35 1.9E-39 393.2 24.5 219 1190-1414 927-1150(2272)
408 PRK10938 putative molybdenum t 100.0 9.5E-35 2.1E-39 362.4 23.2 212 1191-1414 3-225 (490)
409 COG4608 AppF ABC-type oligopep 100.0 6.8E-35 1.5E-39 318.6 19.0 196 1191-1423 4-209 (268)
410 cd03219 ABC_Mj1267_LivG_branch 100.0 6.8E-35 1.5E-39 329.1 19.3 198 607-822 2-232 (236)
411 PRK14242 phosphate transporter 100.0 1.2E-34 2.6E-39 330.5 21.2 204 604-822 5-237 (253)
412 COG4598 HisP ABC-type histidin 100.0 3.5E-35 7.6E-40 294.4 14.7 219 1191-1417 6-245 (256)
413 PRK14250 phosphate ABC transpo 100.0 1.9E-34 4.1E-39 326.1 22.5 201 605-822 3-221 (241)
414 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.7E-35 1.9E-39 324.6 19.4 197 607-817 2-218 (220)
415 cd03226 ABC_cobalt_CbiO_domain 100.0 7.8E-35 1.7E-39 321.3 18.8 188 608-812 2-205 (205)
416 TIGR02633 xylG D-xylose ABC tr 100.0 1.4E-34 3.1E-39 361.6 23.7 214 1192-1412 2-229 (500)
417 PRK13635 cbiO cobalt transport 100.0 1.8E-34 4E-39 332.5 22.6 202 605-822 5-229 (279)
418 TIGR00960 3a0501s02 Type II (G 100.0 6.3E-35 1.4E-39 324.8 17.9 190 606-811 2-216 (216)
419 PRK11153 metN DL-methionine tr 100.0 1.1E-34 2.5E-39 342.9 20.9 204 606-823 2-231 (343)
420 cd03265 ABC_DrrA DrrA is the A 100.0 1E-34 2.2E-39 324.0 19.4 197 606-820 1-219 (220)
421 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.4E-35 2E-39 333.6 19.6 187 625-822 38-250 (269)
422 PRK13546 teichoic acids export 100.0 3.6E-34 7.7E-39 326.4 24.2 214 1191-1422 4-241 (264)
423 PRK11607 potG putrescine trans 100.0 1.7E-34 3.6E-39 343.5 22.4 204 603-823 17-240 (377)
424 PRK10535 macrolide transporter 100.0 1.5E-34 3.2E-39 369.4 23.4 217 1191-1412 4-231 (648)
425 PRK13644 cbiO cobalt transport 100.0 1.8E-34 3.9E-39 331.9 21.3 200 606-822 2-224 (274)
426 PRK11629 lolD lipoprotein tran 100.0 1.8E-34 4E-39 324.8 20.8 198 605-816 5-228 (233)
427 PRK14273 phosphate ABC transpo 100.0 2.5E-34 5.5E-39 327.9 22.2 204 604-822 6-238 (254)
428 TIGR00972 3a0107s01c2 phosphat 100.0 1.7E-34 3.7E-39 328.0 20.6 202 606-822 2-232 (247)
429 cd03263 ABC_subfamily_A The AB 100.0 1.5E-34 3.2E-39 322.8 19.8 198 606-820 1-219 (220)
430 TIGR02315 ABC_phnC phosphonate 100.0 1.8E-34 3.8E-39 327.3 20.7 198 606-820 2-233 (243)
431 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-34 2.4E-39 323.4 18.6 191 607-811 2-218 (218)
432 PRK13537 nodulation ABC transp 100.0 1.9E-34 4.1E-39 336.0 21.4 202 604-823 6-228 (306)
433 TIGR02324 CP_lyasePhnL phospho 100.0 1.7E-34 3.7E-39 323.2 20.0 201 1192-1397 2-222 (224)
434 PRK13539 cytochrome c biogenes 100.0 2.9E-34 6.4E-39 316.9 21.5 194 1191-1399 2-200 (207)
435 cd03256 ABC_PhnC_transporter A 100.0 2E-34 4.3E-39 326.5 20.2 198 607-821 2-233 (241)
436 cd03268 ABC_BcrA_bacitracin_re 100.0 2.6E-34 5.5E-39 318.0 20.4 192 606-815 1-208 (208)
437 PRK10744 pstB phosphate transp 100.0 3.7E-34 8E-39 327.5 22.3 206 602-822 10-244 (260)
438 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.3E-34 7.2E-39 323.3 21.3 199 606-822 2-221 (236)
439 COG4181 Predicted ABC-type tra 100.0 1.8E-34 3.8E-39 287.8 16.7 209 1191-1405 6-227 (228)
440 PLN03211 ABC transporter G-25; 100.0 5.4E-34 1.2E-38 362.0 25.4 199 1206-1413 81-296 (659)
441 PRK11247 ssuB aliphatic sulfon 100.0 4.3E-34 9.3E-39 324.7 22.0 197 604-818 11-219 (257)
442 cd03258 ABC_MetN_methionine_tr 100.0 3.2E-34 6.9E-39 323.0 20.8 202 606-821 2-229 (233)
443 PRK13633 cobalt transporter AT 100.0 4.4E-34 9.5E-39 329.9 22.1 206 605-822 4-233 (280)
444 PRK13640 cbiO cobalt transport 100.0 3.7E-34 8E-39 330.7 21.4 203 604-822 4-232 (282)
445 TIGR01189 ccmA heme ABC export 100.0 2.1E-34 4.6E-39 315.9 18.5 192 1192-1396 1-197 (198)
446 PRK13545 tagH teichoic acids e 100.0 1.1E-33 2.4E-38 338.7 25.9 214 1191-1423 21-241 (549)
447 cd03301 ABC_MalK_N The N-termi 100.0 2.3E-34 5E-39 319.6 18.8 192 606-815 1-213 (213)
448 cd03224 ABC_TM1139_LivF_branch 100.0 3.3E-34 7.2E-39 320.5 20.1 198 606-821 1-220 (222)
449 cd03247 ABCC_cytochrome_bd The 100.0 3.7E-34 8.1E-39 308.5 19.6 166 606-815 1-178 (178)
450 TIGR01288 nodI ATP-binding ABC 100.0 4E-34 8.8E-39 333.8 21.5 202 604-823 3-225 (303)
451 PRK13641 cbiO cobalt transport 100.0 4E-34 8.7E-39 331.3 21.2 206 605-822 2-234 (287)
452 cd03235 ABC_Metallic_Cations A 100.0 2.8E-34 6E-39 318.9 19.0 188 608-814 2-212 (213)
453 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.9E-34 8.5E-39 317.2 20.1 190 606-815 1-211 (211)
454 cd03266 ABC_NatA_sodium_export 100.0 3.1E-34 6.7E-39 319.8 19.4 196 606-815 2-218 (218)
455 PRK14245 phosphate ABC transpo 100.0 3.6E-34 7.9E-39 325.9 20.2 203 605-822 3-234 (250)
456 PRK09536 btuD corrinoid ABC tr 100.0 4E-34 8.7E-39 341.2 21.2 200 605-822 3-228 (402)
457 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.4E-34 7.3E-39 324.5 19.5 200 607-821 2-224 (242)
458 PRK14235 phosphate transporter 100.0 6.5E-34 1.4E-38 326.4 22.0 205 602-821 16-250 (267)
459 PRK14237 phosphate transporter 100.0 6.8E-34 1.5E-38 326.3 22.2 207 601-822 16-251 (267)
460 PRK14259 phosphate ABC transpo 100.0 7.8E-34 1.7E-38 326.0 22.5 206 602-822 10-253 (269)
461 cd03218 ABC_YhbG The ABC trans 100.0 4.1E-34 8.9E-39 321.9 19.9 198 606-821 1-221 (232)
462 PRK13636 cbiO cobalt transport 100.0 6.1E-34 1.3E-38 329.0 21.8 201 605-822 5-231 (283)
463 cd03264 ABC_drug_resistance_li 100.0 4.1E-34 8.9E-39 317.1 19.4 190 606-815 1-211 (211)
464 TIGR03269 met_CoM_red_A2 methy 100.0 2.8E-34 6.1E-39 360.5 20.4 215 1192-1413 1-258 (520)
465 TIGR02211 LolD_lipo_ex lipopro 100.0 4.3E-34 9.3E-39 319.4 19.6 193 606-812 2-220 (221)
466 PRK13632 cbiO cobalt transport 100.0 8.2E-34 1.8E-38 326.3 22.5 203 604-822 6-231 (271)
467 PRK13645 cbiO cobalt transport 100.0 6E-34 1.3E-38 330.5 21.3 207 604-822 5-240 (289)
468 PRK14248 phosphate ABC transpo 100.0 7.3E-34 1.6E-38 326.5 21.7 205 603-822 19-252 (268)
469 PRK14274 phosphate ABC transpo 100.0 9E-34 1.9E-38 324.2 22.3 204 604-822 11-243 (259)
470 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.1E-34 1.1E-38 318.6 19.8 197 1192-1406 23-224 (224)
471 TIGR03771 anch_rpt_ABC anchore 100.0 3.9E-34 8.4E-39 319.5 18.7 193 1214-1423 1-209 (223)
472 PRK11831 putative ABC transpor 100.0 9.2E-34 2E-38 325.6 22.3 201 604-822 6-233 (269)
473 PRK14268 phosphate ABC transpo 100.0 6.7E-34 1.4E-38 325.0 21.0 204 604-822 11-242 (258)
474 PRK13536 nodulation factor exp 100.0 5.5E-34 1.2E-38 335.3 20.9 203 603-823 39-262 (340)
475 COG1129 MglA ABC-type sugar tr 100.0 8.5E-34 1.8E-38 336.3 22.4 210 1191-1407 8-228 (500)
476 PRK14251 phosphate ABC transpo 100.0 5.6E-34 1.2E-38 324.6 20.1 203 605-822 4-235 (251)
477 TIGR01166 cbiO cobalt transpor 100.0 3.3E-34 7.2E-39 312.4 17.4 177 1206-1387 5-189 (190)
478 PRK13649 cbiO cobalt transport 100.0 6.2E-34 1.3E-38 329.2 20.6 206 605-822 2-234 (280)
479 PRK10247 putative ABC transpor 100.0 6.3E-34 1.4E-38 318.4 20.0 198 604-818 6-223 (225)
480 TIGR03415 ABC_choXWV_ATP choli 100.0 3.9E-34 8.5E-39 338.6 19.2 188 625-823 38-255 (382)
481 PRK10584 putative ABC transpor 100.0 9.5E-34 2.1E-38 318.1 21.2 197 604-814 5-227 (228)
482 PRK13642 cbiO cobalt transport 100.0 9E-34 2E-38 326.8 21.4 204 605-823 4-230 (277)
483 PRK14249 phosphate ABC transpo 100.0 1E-33 2.3E-38 322.3 21.6 203 605-822 4-235 (251)
484 PRK14270 phosphate ABC transpo 100.0 8.9E-34 1.9E-38 322.9 21.0 203 605-822 4-235 (251)
485 cd03269 ABC_putative_ATPase Th 100.0 6.1E-34 1.3E-38 315.5 19.0 191 607-815 2-210 (210)
486 PRK09493 glnQ glutamine ABC tr 100.0 9.4E-34 2E-38 320.6 20.9 199 606-822 2-225 (240)
487 PRK14239 phosphate transporter 100.0 9.8E-34 2.1E-38 322.9 21.1 203 605-822 5-236 (252)
488 PRK13541 cytochrome c biogenes 100.0 6.8E-34 1.5E-38 311.1 18.9 188 1192-1395 2-193 (195)
489 PRK10575 iron-hydroxamate tran 100.0 1.3E-33 2.8E-38 323.8 21.9 201 603-821 9-236 (265)
490 PRK13652 cbiO cobalt transport 100.0 1.3E-33 2.9E-38 325.4 22.1 201 605-822 3-227 (277)
491 PRK13648 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 324.8 21.5 203 604-822 6-231 (269)
492 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-33 2.5E-38 320.3 20.9 197 606-821 3-230 (242)
493 PRK10619 histidine/lysine/argi 100.0 1.1E-33 2.4E-38 323.1 20.9 202 604-822 4-241 (257)
494 TIGR01188 drrA daunorubicin re 100.0 5.9E-34 1.3E-38 332.3 18.9 187 625-823 7-214 (302)
495 PRK10771 thiQ thiamine transpo 100.0 2.1E-33 4.6E-38 315.9 22.8 197 606-822 2-219 (232)
496 TIGR02673 FtsE cell division A 100.0 4.9E-34 1.1E-38 317.2 17.4 188 606-810 2-214 (214)
497 COG0410 LivF ABC-type branched 100.0 9.3E-34 2E-38 300.4 18.5 205 606-823 4-227 (237)
498 PRK00635 excinuclease ABC subu 100.0 3.4E-32 7.5E-37 362.5 38.0 100 1315-1414 1375-1484(1809)
499 PRK14240 phosphate transporter 100.0 1.6E-33 3.4E-38 320.8 21.8 202 605-821 3-233 (250)
500 PRK14243 phosphate transporter 100.0 2.1E-33 4.6E-38 321.7 22.9 204 604-822 9-248 (264)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-260 Score=2465.73 Aligned_cols=1211 Identities=42% Similarity=0.705 Sum_probs=1118.0
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhH
Q 000553 202 TDSGNNQSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGY 279 (1428)
Q Consensus 202 ~~~e~~~~~--~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~ 279 (1428)
+.|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|||
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 345555555 999999999999999999999999999999999999999999999999874434578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTII 358 (1428)
Q Consensus 280 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~I 358 (1428)
+++..++++++.+...|++|.+++.+|++++++ .+.+.||+++++++++.++++++.++|+|...++|+++|+++.++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999884 6678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000553 359 YQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWI 438 (1428)
Q Consensus 359 y~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~ 438 (1428)
|+|+|+++...+++.+.|+++|+|++|++|+.++..++|.+|.+|+|+++++|+||.++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 439 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLF 518 (1428)
Q Consensus 439 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1428)
+++++++|++.|+.+|+|+++|+|+|+|||+|||||||+.|.++|++.|++|++.++|..++.+++.+++.++|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCc
Q 000553 519 TFGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 597 (1428)
Q Consensus 519 ~f~~y~-~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 597 (1428)
+|++|+ ..++.++++++|+++++|++|+.|+..+|+.+..++++.+|++|+++||..+|.++..... .+
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~-------- 511 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SP-------- 511 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CC--------
Confidence 999999 7788999999999999999999999999999999999999999999999999877632210 01
Q ss_pred cCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcCcEEEE
Q 000553 598 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYV 677 (1428)
Q Consensus 598 ~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~~i~y~ 677 (1428)
....+.+|+++|++|+|++++++++ |+||||+|++|+++||||++||||||||++|+||+++.+|++.++|++|||
T Consensus 512 -~~~~~~~i~i~~~sfsW~~~~~~~t---L~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv 587 (1381)
T KOG0054|consen 512 -DEAGENAIEIKNGSFSWDSESPEPT---LKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYV 587 (1381)
T ss_pred -CCCCCceEEEeeeeEecCCCCCccc---ccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEe
Confidence 1234567999999999998544444 999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEE
Q 000553 678 PQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYML 757 (1428)
Q Consensus 678 ~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illL 757 (1428)
||+|||+||||||||+||++||++||++|+++|+|++|++.||+||+|+|||+|.||||||||||+||||+|+++|||||
T Consensus 588 ~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLL 667 (1381)
T KOG0054|consen 588 PQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLL 667 (1381)
T ss_pred ccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCcccccccchh
Q 000553 758 DDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTS 837 (1428)
Q Consensus 758 Dep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~ 837 (1428)
|||+||||+||++|||++|+.| .+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+
T Consensus 668 DDplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 668 DDPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESE 746 (1381)
T ss_pred cCcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchh
Confidence 9999999999999999999977 889999999999999999999999999999999999999997665554432111111
Q ss_pred hhh--hhhhhccccc---c---hhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhh-hhHHHHHHHHHHH
Q 000553 838 LHM--QKQEMRTNAS---S---ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSA 908 (1428)
Q Consensus 838 ~~~--~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~ 908 (1428)
... .....+.... . ........++......++..+..++|+++.|.+++++|+.|+++ .|+....+++++.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~ 826 (1381)
T KOG0054|consen 747 QEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLF 826 (1381)
T ss_pred hccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHH
Confidence 000 0000000000 0 00000000111111112245566778889999999999999998 5666677777888
Q ss_pred HHHHHHHhhhhhhhhhhhcccCCCCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000553 909 ILMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 987 (1428)
Q Consensus 909 ~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 987 (1428)
++.+++..+.++|+++|++........ .+..+|+++|++++++..++.+++++.+..++.++|+++|++|+++++|+||
T Consensus 827 v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm 906 (1381)
T KOG0054|consen 827 VLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPM 906 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999875332221 4677999999999999999999999999999999999999999999999999
Q ss_pred cccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 988 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1067 (1428)
Q Consensus 988 ~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~ 1067 (1428)
+|||+||+|||+||||+|++.+|..+|..+..++.+++.+++++++++++.|+++++++|+.++|+++++||++++||++
T Consensus 907 ~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLk 986 (1381)
T KOG0054|consen 907 SFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELK 986 (1381)
T ss_pred hhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Q 000553 1068 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ----------------- 1130 (1428)
Q Consensus 1068 rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~----------------- 1130 (1428)
|+|+.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|...+++||+++|+|
T Consensus 987 RLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~ 1066 (1381)
T KOG0054|consen 987 RLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL 1066 (1381)
T ss_pred HhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc--cccCCCCCCCCCCCccEEEEEEEE
Q 000553 1131 ---------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEFQNVTM 1199 (1428)
Q Consensus 1131 ---------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~--~~~~~~~~~~wp~~g~I~f~nvs~ 1199 (1428)
+|++++|++++++.++|++++.+++|+.|+||||+.||.++|+|+ ......||++||.+|+|+|+|+++
T Consensus 1067 ~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~ 1146 (1381)
T KOG0054|consen 1067 PSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSL 1146 (1381)
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEE
Confidence 799999999999999999999999999999999999999998883 122233889999999999999999
Q ss_pred EECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcccc
Q 000553 1200 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1279 (1428)
Q Consensus 1200 ~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1279 (1428)
||+++.|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++|||||+||
T Consensus 1147 RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLF 1226 (1381)
T KOG0054|consen 1147 RYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLF 1226 (1381)
T ss_pred EeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCC
Q 000553 1280 EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1357 (1428)
Q Consensus 1280 ~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~l 1357 (1428)
+||||+||||+++++|++||+||++|+|+++++++ |||++|.|+|.|||.||||++||||||||++|||+||||||++
T Consensus 1227 sGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsV 1306 (1381)
T KOG0054|consen 1227 SGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASV 1306 (1381)
T ss_pred cCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccC
Confidence 99999999999999999999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1358 DAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1358 D~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++++.+
T Consensus 1307 D~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1307 DPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAA 1376 (1381)
T ss_pred ChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998887653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.1e-210 Score=2124.00 Aligned_cols=1398 Identities=31% Similarity=0.532 Sum_probs=1163.1
Q ss_pred CccCCCCcc-ccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-ccc-cCCcccchhhHHHHHHHHHHHHHHHH
Q 000553 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-ITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1428)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1428)
+-+|+.... +|.+. .+.+||++..+..+++..... ..+.+- .++ .....+..+..+.|+.+.+++++.++
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964322 35553 466999995444444433332 111111 111 12222233366666666655554333
Q ss_pred HHHHHHHHH---HHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhH
Q 000553 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLV 143 (1428)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt 143 (1428)
...+..... ..+... +.+..+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVLS-- 164 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHHH--
Confidence 333221111 111110 11122333 566777778888777888999999999999999999999 77776621
Q ss_pred Hhhhhhhhh---hhHHHHHHHHHHHHHHHH-HHHHhhcccCccccc---ccccccCCC-CCcCcCCCCCCCCCChhHHHH
Q 000553 144 TFSSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSI---EESLLSVDG-DVEEDCNTDSGNNQSYWDLMA 215 (1428)
Q Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~e~~~~~~s~~~ 215 (1428)
..+.... .. ....+++.+++.++. ++.+..++.+ .+. .+...+.++ ......+.+||+++|+|||++
T Consensus 165 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1622)
T PLN03130 165 --VKEYYSSFVLYL-YISEVAAQVLFGILLLVYFPNLDPYP--GYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIF 239 (1622)
T ss_pred --HHHHHhccccce-ehhHHHHHHHHHHHHHHHHhcCCCCc--ccccccccccccccccCCcccCCCCcccccCHHHHHH
Confidence 1111111 11 222333344433333 3333222211 110 000000000 001234678999999999999
Q ss_pred HHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000553 216 FKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIG 295 (1428)
Q Consensus 216 f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~ 295 (1428)
|||++|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.
T Consensus 240 F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 240 FGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999765 2 35689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh
Q 000553 296 FAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD 375 (1428)
Q Consensus 296 ~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~ 375 (1428)
+++|++++.+++++.++...+.++++++++++..++.+++.++|.+...+++.++|+.+...||+|+++++...+++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999764444667877777777777777788888888899999999999999999999999988888899
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 376 GEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDE 455 (1428)
Q Consensus 376 g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 455 (1428)
|+++|+|++|++++......+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHhHH
Q 000553 456 RIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMV 535 (1428)
Q Consensus 456 R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~~~~Lt~~~~ 535 (1428)
|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEee
Q 000553 536 FTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSW 615 (1428)
Q Consensus 536 ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w 615 (1428)
|+++++++.+..|+..+|..+..+.++++|++||++||+.+|..+... .+. ......|+++|++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y 624 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSW 624 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEc
Confidence 999999999999999999999999999999999999998765432100 000 0122469999999999
Q ss_pred cCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC-eEEEEcCcEEEEcCCCCCCcccHHHHHhc
Q 000553 616 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILF 694 (1428)
Q Consensus 616 ~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~-G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~ 694 (1428)
+++++. ++|+|+||++++|++++|+||+|||||||+++|+|+++|.+ |+|.++++||||+|+|||||+||||||+|
T Consensus 625 ~~~~~~---~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~f 701 (1622)
T PLN03130 625 DSKAER---PTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILF 701 (1622)
T ss_pred cCCCCC---ceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhC
Confidence 854323 35999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHH
Q 000553 695 GKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILS 774 (1428)
Q Consensus 695 g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~ 774 (1428)
|+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++
T Consensus 702 g~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~ 781 (1622)
T PLN03130 702 GSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFD 781 (1622)
T ss_pred CCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCcccccccch---hhhhhhhhhcccccc
Q 000553 775 NAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDT---SLHMQKQEMRTNASS 851 (1428)
Q Consensus 775 ~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 851 (1428)
+++.+ .++++|+|+|||++++++.||+|++|++|+|+++|+++|+++..+.+..+..+... ..+............
T Consensus 782 ~~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1622)
T PLN03130 782 KCIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSS 860 (1622)
T ss_pred HHhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccc
Confidence 98766 56789999999999999999999999999999999999998765444332211100 000000000000000
Q ss_pred hhh-h---hhhhccc--ccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHhhhhhhhhh
Q 000553 852 ANK-Q---ILLQEKD--VVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW-FITLVICLSAILMQASRNGNDLWLSY 924 (1428)
Q Consensus 852 ~~~-~---~~~~~~~--~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wl~~ 924 (1428)
... . ....... ..+..+......++|+++.|.+++++|++|+++.|. +.+++++++.++.+++..++++|+++
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 940 (1622)
T PLN03130 861 KPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSE 940 (1622)
T ss_pred ccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0000000 000000112234567788999999999999998653 34444455666778888899999999
Q ss_pred hhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhc
Q 000553 925 WVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSS 1004 (1428)
Q Consensus 925 w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~ 1004 (1428)
|++.... ......+|+++|++++++..++.+++.+++.+.+.++++++|++++++++++|++|||++|+|+|+|||++
T Consensus 941 w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~ 1018 (1622)
T PLN03130 941 WTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAK 1018 (1622)
T ss_pred HHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHH
Confidence 9985322 12234578889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHh
Q 000553 1005 DLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTET 1084 (1428)
Q Consensus 1005 D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Et 1084 (1428)
|++.+|..++..+..++..++.+++.++++++..|+++++++|+.++++.++++|.+++|++++++.++++|+++|+.|+
T Consensus 1019 Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Et 1098 (1622)
T PLN03130 1019 DLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEA 1098 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999999988888888888888999888888999999999999999999999999999999
Q ss_pred hcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------HHHH
Q 000553 1085 LNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ------------------------------VGLA 1134 (1428)
Q Consensus 1085 l~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~------------------------------~gl~ 1134 (1428)
++|+.|||+|+++++|.+.+.+..|.+++..+.....++|++++++ +|++
T Consensus 1099 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ 1178 (1622)
T PLN03130 1099 LNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLL 1178 (1622)
T ss_pred hCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHH
Confidence 9999999999999999999999999999999998888999876654 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEECCCCCccceee
Q 000553 1135 LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDI 1212 (1428)
Q Consensus 1135 l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~i 1212 (1428)
++|++.+...+.++.+.+.++|+.++|+||+.+|.+.|+|+.. ....+++.||.+|.|+|+||+|+|+++.++||+|+
T Consensus 1179 ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~i 1258 (1622)
T PLN03130 1179 LSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGL 1258 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecce
Confidence 6666777778888899999999999999999999999887632 22345567999999999999999988777899999
Q ss_pred eEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCC
Q 000553 1213 NFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM 1292 (1428)
Q Consensus 1213 s~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~ 1292 (1428)
||+|+||||||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+||||+||||+++
T Consensus 1259 s~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~ 1338 (1622)
T PLN03130 1259 SFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNE 1338 (1622)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHH
Q 000553 1293 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAIS 1370 (1428)
Q Consensus 1293 ~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~ 1370 (1428)
++|+|+|+|+++++++++++++ ||||.++|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|+
T Consensus 1339 ~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~ 1418 (1622)
T PLN03130 1339 HNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIR 1418 (1622)
T ss_pred CCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1371 SECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1371 ~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
+.+++||||+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|
T Consensus 1419 ~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1419 EEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred HHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999987899999999887
No 3
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.4e-209 Score=2124.21 Aligned_cols=1382 Identities=31% Similarity=0.517 Sum_probs=1178.9
Q ss_pred ccchhhhHHHHHHhhhHHHH-HHhhhc-ccccCCc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc-c
Q 000553 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFVS-Y 92 (1428)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 92 (1428)
+.+||.+..+..+++.++.+ ....+- ..++..+ ....+.+..|++...++++ ++++. ++...|..+....+ +
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWAD-LFYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHH-HHHHHHhccccccccc
Confidence 55999998887766666655 222111 1122222 4445667778776655433 23322 23333333222222 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhhh---hHHHHHHHHHHHHHHH
Q 000553 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEVLKC---LKEICLVLLDIMFGIS 169 (1428)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~~---~~~~~~~~~~~~~~~~ 169 (1428)
.+++++++.++++++++++++.||.|+.|||.++.+||++++++|++++||+|........ ......+++.++++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999999999875321100 0012333344444544
Q ss_pred HHHHHh-hcccCcccccccccccCCCCCcCcCCCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHH
Q 000553 170 INIIRV-KRASSRRSSIEESLLSVDGDVEEDCNTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTC 248 (1428)
Q Consensus 170 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~ 248 (1428)
.++.+. .+++| .+.+.. ...+.+||+++|++||++|||+||++++|||++|+.+|||+++++++++.+
T Consensus 179 ~~~~~~~~~~~~--------~~~~~~---~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~ 247 (1522)
T TIGR00957 179 QLVLSCFSDKSP--------LFSETN---HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMV 247 (1522)
T ss_pred HHHHHhhcCCCC--------cccccc---ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHH
Confidence 433333 22222 111100 112468999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc---------------------------------------CCCCcchHHHHHHHHhHHHHHHHHHHH
Q 000553 249 HSKLLSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLKV 289 (1428)
Q Consensus 249 ~~~~~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~l~~l 289 (1428)
.++|++.|+++.++ +.++++|+++++++|+++++..+++++
T Consensus 248 ~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l 327 (1522)
T TIGR00957 248 VPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKA 327 (1522)
T ss_pred HHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999875310 113478999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000553 290 VNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLA 368 (1428)
Q Consensus 290 ~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~ 368 (1428)
+.+++.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++..
T Consensus 328 ~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~ 407 (1522)
T TIGR00957 328 IHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNS 407 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChh
Confidence 99999999999999999999763 34456899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 369 ERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEK 448 (1428)
Q Consensus 369 ~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~ 448 (1428)
.+++.++|+++|+|++|++++..+...+|.+|..|+++++++++||.++|+++++|++++++++|++.++++++++.+++
T Consensus 408 ~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 487 (1522)
T TIGR00957 408 ARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVA 487 (1522)
T ss_pred hcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 000553 449 MMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM-- 526 (1428)
Q Consensus 449 ~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~-- 526 (1428)
+++++|+|++.++|+++|||+||++|||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+.
T Consensus 488 ~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 567 (1522)
T TIGR00957 488 HMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDE 567 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999888888888888988889999999876
Q ss_pred CCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceE
Q 000553 527 GHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAV 606 (1428)
Q Consensus 527 ~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 606 (1428)
++.|+++.+|+++++++++..|+..+|..++.+.++.+|++||++||+.++.++..... ... .......+
T Consensus 568 ~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~--~~~--------~~~~~~~i 637 (1522)
T TIGR00957 568 NNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER--RTI--------KPGEGNSI 637 (1522)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc--ccc--------CCCCCCcE
Confidence 46799999999999999999999999999999999999999999999876543211000 000 00112369
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcCcEEEEcCCCCCCcc
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSG 686 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~~i~y~~Q~p~l~~~ 686 (1428)
+++|++|+|+.+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||+|+||++++
T Consensus 638 ~~~~~~~~~~~~~----~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~ 713 (1522)
T TIGR00957 638 TVHNATFTWARDL----PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQND 713 (1522)
T ss_pred EEEEeEEEcCCCC----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCC
Confidence 9999999997431 235999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccH
Q 000553 687 TIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDA 766 (1428)
Q Consensus 687 ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~ 766 (1428)
||+|||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|+|+|||||||+||+
T Consensus 714 Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~ 793 (1522)
T TIGR00957 714 SLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDA 793 (1522)
T ss_pred cHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcC-cccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCcccccccch--hh---hh
Q 000553 767 QVARWILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDT--SL---HM 840 (1428)
Q Consensus 767 ~~~~~i~~~~~~~-~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~--~~---~~ 840 (1428)
++++++++.++.. .+.+++|+|+|||+++.++.||+|++|++|+++++|+++++.+..+.+.....+... .. +.
T Consensus 794 ~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 873 (1522)
T TIGR00957 794 HVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLED 873 (1522)
T ss_pred HHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccc
Confidence 9999999986521 156789999999999999999999999999999999999998654433322110000 00 00
Q ss_pred h------hhhhcc-------cc----cchhhh------h--hh---h---c-c-cccCCCchhhHHHHHHHHhcCcchHH
Q 000553 841 Q------KQEMRT-------NA----SSANKQ------I--LL---Q---E-K-DVVSVSDDAQEIIEVEQRKEGRVELT 887 (1428)
Q Consensus 841 ~------~~~~~~-------~~----~~~~~~------~--~~---~---~-~-~~~~~~~~~~~~~~~e~~~~g~v~~~ 887 (1428)
. .+..+. .. ...... . .. . . + +..+..+...+..++|+++.|.++++
T Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 953 (1522)
T TIGR00957 874 SWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELS 953 (1522)
T ss_pred cccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHH
Confidence 0 000000 00 000000 0 00 0 0 0 00000011123456677888999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1428)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1428)
+|++|+++.|+...++++++.++.+++..++++|+++|++............+|+++|++++++..++.+++.+++.+.+
T Consensus 954 ~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~ 1033 (1522)
T TIGR00957 954 VYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGG 1033 (1522)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988777666677777888889999999999975321112233456888999999999999888888899999
Q ss_pred HHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000553 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1428)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1428)
.++++++|++++++++++|++|||++|+|+++|||++|++.+|..++..+..++..++.+++.++++++..|+++++++|
T Consensus 1034 ~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~ 1113 (1522)
T TIGR00957 1034 IQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPP 1113 (1522)
T ss_pred HHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999989999999988999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1428)
Q Consensus 1048 ~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1428)
++++++.++++|.+++|++++++.++++|+++|+.|+++|+.|||+||+|++|.+++.+.+|.++++.+.....++|++.
T Consensus 1114 ~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1193 (1522)
T TIGR00957 1114 LGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAV 1193 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc--cCC
Q 000553 1128 RLQ-------------------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQ 1180 (1428)
Q Consensus 1128 ~l~-------------------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~--~~~ 1180 (1428)
+++ +|++++|+..+...+.++++.++++|+.++|++|+.+|.+.|+|+.. ...
T Consensus 1194 ~~~~~~~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~ 1273 (1522)
T TIGR00957 1194 RLECVGNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQET 1273 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCC
Confidence 755 34566778888888999999999999999999999999988877531 223
Q ss_pred CCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC
Q 000553 1181 SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT 1260 (1428)
Q Consensus 1181 ~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i 1260 (1428)
.++++||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++
T Consensus 1274 ~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i 1353 (1522)
T TIGR00957 1274 APPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKI 1353 (1522)
T ss_pred CCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEcccc
Confidence 45568999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred ChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHH
Q 000553 1261 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1261 ~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
+++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||+|||
T Consensus 1354 ~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1354 GLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred CHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998 999999999999999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcH
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSV 1418 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~ 1418 (1428)
|||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++++||||+|||+|+|+|+|+|+||+++ +|.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~ 1512 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGI 1512 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997 589
Q ss_pred HHHHHHhhCC
Q 000553 1419 FSSFVRASTM 1428 (1428)
Q Consensus 1419 f~~l~~~~~~ 1428 (1428)
|++|++++|.
T Consensus 1513 f~~l~~~~g~ 1522 (1522)
T TIGR00957 1513 FYSMAKDAGL 1522 (1522)
T ss_pred HHHHHHHcCC
Confidence 9999999884
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.7e-206 Score=2086.80 Aligned_cols=1399 Identities=30% Similarity=0.524 Sum_probs=1156.1
Q ss_pred cCCCCc-cccccc------cccchhhhHHHHHHhhhHHHH-HHhhhc-c-cccCCcccchhhHHHHHHHHHHHHHHHHHH
Q 000553 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-I-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1428)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1428)
+|+... ..|.+. .+.+||++..+...++....+ ..+.+- . ..++...+..+..+.|+.+.+++++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995444444433332 212111 1 011222222236666766665555433333
Q ss_pred HHHHHH---HHHHhcc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000553 74 SVDVIL---LLKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1428)
Q Consensus 74 ~~~~~~---~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1428)
...... ...+... .....+.. +++.++..++++++..+.+.||.|+.+++..+.+||++. +++.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVLP---- 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHHH----
Confidence 322111 0111111 11122333 666778888888777789999999999999999999999 77777621
Q ss_pred hhhhhhh---hhHHHHHHHHHHHHHHHH-HHHHhhcccCcccccccccccC-CCC-CcCcCCCCCCCCCChhHHHHHHhH
Q 000553 146 SSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSIEESLLSV-DGD-VEEDCNTDSGNNQSYWDLMAFKSI 219 (1428)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~e~~~~~~s~~~f~W~ 219 (1428)
..+.... .. ....++..+.+.+.. +..+..++.+.-.....+...+ .+. .+...+++||+++|+|||++|+|+
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~ 243 (1495)
T PLN03232 165 LKNSINRTALYL-CISSRCCQALFGILLLVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWM 243 (1495)
T ss_pred HHHHHhccccce-ehhHHHHHHHHHHHHHHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHHHH
Confidence 1111111 11 122222333333222 2222222211000000000010 000 011245789999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000553 220 DSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGP 299 (1428)
Q Consensus 220 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P 299 (1428)
+|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|+++++..++++++.+++.+++|
T Consensus 244 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1495)
T PLN03232 244 TPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGP 321 (1495)
T ss_pred HHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765 2 356899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHH
Q 000553 300 LLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQ 379 (1428)
Q Consensus 300 ~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~ 379 (1428)
++++.+++++++++..+.++++++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++....++.++|+++
T Consensus 322 ~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~ 401 (1495)
T PLN03232 322 VILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVT 401 (1495)
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHH
Confidence 99999999997644455688888888888888899988999999999999999999999999999999888888899999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 380 TFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRR 459 (1428)
Q Consensus 380 nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~ 459 (1428)
|+|++|++++.+....+|.+|..|++++++++++|+.+|+++++|++++++++|++.++++++++.++++++.+|+|.+.
T Consensus 402 n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~ 481 (1495)
T PLN03232 402 NMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGI 481 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHhHHHHHH
Q 000553 460 TGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCL 539 (1428)
Q Consensus 460 ~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l 539 (1428)
++|+++|||+||+||||+.+.+++++.|++|++..++.....++..+++...|.++++++|++|.+.++.+|++.+|+++
T Consensus 482 ~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l 561 (1495)
T PLN03232 482 INEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSL 561 (1495)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999988888877777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCC
Q 000553 540 ALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNN 619 (1428)
Q Consensus 540 ~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~ 619 (1428)
++++.+..|+..+|..+..+.++.+|++||++||+.++..+... .+. ......|+++|++|+|++++
T Consensus 562 ~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~~~ 628 (1495)
T PLN03232 562 SLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDSKT 628 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCCCC
Confidence 99999999999999999999999999999999998765321100 000 01234699999999998543
Q ss_pred ccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeE-EEEcCcEEEEcCCCCCCcccHHHHHhcCCCC
Q 000553 620 EEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGKNY 698 (1428)
Q Consensus 620 ~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~-i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~ 698 (1428)
++ ++|+|+||++++||+++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||+++
T Consensus 629 ~~---~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~ 705 (1495)
T PLN03232 629 SK---PTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDF 705 (1495)
T ss_pred CC---ceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCcc
Confidence 23 3599999999999999999999999999999999999999975 5678999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhc
Q 000553 699 DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIM 778 (1428)
Q Consensus 699 ~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~ 778 (1428)
|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.
T Consensus 706 ~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~ 785 (1495)
T PLN03232 706 ESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMK 785 (1495)
T ss_pred CHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCcccccccchhhhhhhhh-hcccccc-h-hhh
Q 000553 779 GPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQE-MRTNASS-A-NKQ 855 (1428)
Q Consensus 779 ~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~ 855 (1428)
+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+..+.+.....+.....+..+.. ...+... . ...
T Consensus 786 ~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (1495)
T PLN03232 786 D-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVT 864 (1495)
T ss_pred h-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccc
Confidence 6 5688999999999999999999999999999999999999876544433221111000000000 0000000 0 000
Q ss_pred hhhhcc---cccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCC
Q 000553 856 ILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGS 931 (1428)
Q Consensus 856 ~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 931 (1428)
....+. +..+.++......++|+++.|.+++++|++|+++.| ++..++++++.++.++...++++|+++|++....
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 944 (1495)
T PLN03232 865 IDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP 944 (1495)
T ss_pred ccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 000000 000000011224566778899999999999999865 3444455556667778888899999999975321
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhh
Q 000553 932 SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDD 1011 (1428)
Q Consensus 932 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~ 1011 (1428)
......+|+++|++++++..++.+++.+++.+.+.++++++|++++++++++|++||+++|+|+++|||++|++.+|.
T Consensus 945 --~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~ 1022 (1495)
T PLN03232 945 --KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDR 1022 (1495)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHH
Confidence 122346899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHH
Q 000553 1012 SLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTI 1091 (1428)
Q Consensus 1012 ~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tI 1091 (1428)
.++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++++..+++|+++|++|+++|+.||
T Consensus 1023 ~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tI 1102 (1495)
T PLN03232 1023 NVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSI 1102 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHH
Confidence 99999999999888888888888877888888888888888888999999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------HHHHHHHHHHH
Q 000553 1092 RAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ------------------------------VGLALSYAAPI 1141 (1428)
Q Consensus 1092 raf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~------------------------------~gl~l~~~~~~ 1141 (1428)
|+|+++++|.+++.+..|.+++..+.....++|+.++++ +|++++|+..+
T Consensus 1103 raf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 1182 (1495)
T PLN03232 1103 RAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNI 1182 (1495)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999988888888876654 12233445556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCC
Q 000553 1142 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGG 1219 (1428)
Q Consensus 1142 ~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~G 1219 (1428)
...++++++.+.++|+.++|+||+.++.+.|+|+.. ....++++||.+|.|+|+||+|+|+++.++||+|+||+|+||
T Consensus 1183 ~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~G 1262 (1495)
T PLN03232 1183 TTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPS 1262 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCC
Confidence 667778899999999999999999999998887532 222345679999999999999999887788999999999999
Q ss_pred cEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHH
Q 000553 1220 TQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIW 1299 (1428)
Q Consensus 1220 ekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~ 1299 (1428)
||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+||||+||||+++++|+|+|
T Consensus 1263 ekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~ 1342 (1495)
T PLN03232 1263 EKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLW 1342 (1495)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcE
Q 000553 1300 SVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMT 1377 (1428)
Q Consensus 1300 ~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~T 1377 (1428)
+|+++++++++++++ ||||.++|+|.|||||||||+||||||+|+|+|||||||||+||.+||+.||++|++.+++||
T Consensus 1343 ~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~T 1422 (1495)
T PLN03232 1343 EALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCT 1422 (1495)
T ss_pred HHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhCC
Q 000553 1378 VITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRASTM 1428 (1428)
Q Consensus 1378 vI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~~ 1428 (1428)
+|+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|++++|.
T Consensus 1423 vI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1423 MLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGP 1473 (1495)
T ss_pred EEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 999999999999999999999999999999999999888899999998873
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.2e-195 Score=1974.86 Aligned_cols=1206 Identities=28% Similarity=0.465 Sum_probs=1059.9
Q ss_pred CCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCcchHHHHHHHHhHHH
Q 000553 202 TDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPY 281 (1428)
Q Consensus 202 ~~~e~~~~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (1428)
.+||+++|+|||++|||++|++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998765233456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 282 ICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1428)
Q Consensus 282 ~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy 359 (1428)
+..++++++.+++.+++|++++++|++++..+ ..+.+|++++++++++++.+++.+++.|...++++++|++|...||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996422 2456899999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000553 360 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 439 (1428)
Q Consensus 360 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~ 439 (1428)
+|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 440 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 519 (1428)
Q Consensus 440 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1428)
+++.++++++++++|+|++.++|+|+|||+||+||||+.|.+++++.|++|++..++..++..+..+++...|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888889999999999
Q ss_pred HHHHHHhCCCCcHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCcc
Q 000553 520 FGLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 598 (1428)
Q Consensus 520 f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 598 (1428)
|++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--------------- 386 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY--------------- 386 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc---------------
Confidence 999988755 789999999999999999985 799999999999999999999998776432100
Q ss_pred CCCCCceEEEEccEEeecCCC----------------c-c-----------ccccceeeeeeEecCCCEEEEEcCCCCcH
Q 000553 599 FNSKDMAVIMQDATCSWYCNN----------------E-E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1428)
Q Consensus 599 ~~~~~~~i~~~~~sf~w~~~~----------------~-~-----------~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1428)
+.....++++|++|.|+... . . ..+++|+|+||+|++|++++|+|||||||
T Consensus 387 -~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGK 465 (1490)
T TIGR01271 387 -NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGK 465 (1490)
T ss_pred -cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCH
Confidence 01123589999999996320 0 0 01357999999999999999999999999
Q ss_pred HHHHHHHHcCccCCCeEEEEcCcEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCC
Q 000553 651 SSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1428)
Q Consensus 651 Stll~~llG~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~ 730 (1428)
||||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++
T Consensus 466 STLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 466 SSLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred HHHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
|.+|||||||||+||||+|++|++|||||||||||+++++++++.|+.+ +.+++|+|+|||+++.++.||+|++|++|+
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~ 624 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGV 624 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999987655 567899999999999999999999999999
Q ss_pred EEEecChHHHHhccccCccccc--------------------------c--c-----c-hh-----hhhhh-hhh-----
Q 000553 811 VKWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-TS-----LHMQK-QEM----- 845 (1428)
Q Consensus 811 i~~~g~~~el~~~~~~~~~~~~--------------------------~--~-----~-~~-----~~~~~-~~~----- 845 (1428)
+.+.|+++++......+..... + . + .. .+... ...
T Consensus 625 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1490)
T TIGR01271 625 CYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSI 704 (1490)
T ss_pred EEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998754211100000 0 0 0 00 00000 000
Q ss_pred --------------------------c--ccccch------hh---------------------------------hh--
Q 000553 846 --------------------------R--TNASSA------NK---------------------------------QI-- 856 (1428)
Q Consensus 846 --------------------------~--~~~~~~------~~---------------------------------~~-- 856 (1428)
. .....+ .. ..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1490)
T TIGR01271 705 ILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNR 784 (1490)
T ss_pred cccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 0 000000 00 00
Q ss_pred --hhhcc------------------cc------c-CC-------C---ch--hhHHHHHHHHhcCcchHHHHHHHHhhhh
Q 000553 857 --LLQEK------------------DV------V-SV-------S---DD--AQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1428)
Q Consensus 857 --~~~~~------------------~~------~-~~-------~---~~--~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1428)
...+. .. . .. . ++ .+...++|+++.|.++|++|++|+++.|
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g 864 (1490)
T TIGR01271 785 GENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNR 864 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcC
Confidence 00000 00 0 00 0 00 0123455677889999999999999876
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhhhhhhhhcccC-----C-CCC-----------Cccchhh-HHHHHHHHHHHHHHHHH
Q 000553 898 W-FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLV 958 (1428)
Q Consensus 898 ~-~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~l~~~~~~~~~~ 958 (1428)
+ ..+++++++.++.+++..++++|+++|..... . .+. .....+| +++|++++++..++.++
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1490)
T TIGR01271 865 NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFF 944 (1490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5 44444456667788999999999999875210 0 000 0012233 45555555556677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHH
Q 000553 959 RAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQ 1038 (1428)
Q Consensus 959 ~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~ 1038 (1428)
+.+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1039 VFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSE 1118 (1428)
Q Consensus 1039 ~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~ 1118 (1428)
|+++++++|++++++.++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+.++.+++.++..
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 000553 1119 LTASLWLSLRLQ------------------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1174 (1428)
Q Consensus 1119 ~~~~~wl~~~l~------------------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e 1174 (1428)
.+.++|+..+++ +|++++|++.+...+.++++.+.++|..+.|++|+.+|.+.|+|
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e 1184 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTFIAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQE 1184 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999987765 45556677778888899999999999999999999999988876
Q ss_pred cccc----------------CCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHH
Q 000553 1175 ELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNA 1238 (1428)
Q Consensus 1175 ~~~~----------------~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~ 1238 (1428)
+... ...+++.||.+|.|+|+||+|+|+++.+++|+||||+|+||||||||||||||||||+++
T Consensus 1185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~l 1264 (1490)
T TIGR01271 1185 EPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSA 1264 (1490)
T ss_pred cccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 4211 012345799999999999999999877899999999999999999999999999999999
Q ss_pred HhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CC
Q 000553 1239 LFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GL 1316 (1428)
Q Consensus 1239 L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gL 1316 (1428)
|+|+++ .+|+|+|||+||++++++++|++|++|||||+||+||||+||||++.++|+++|+||++++++++++++ ||
T Consensus 1265 L~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GL 1343 (1490)
T TIGR01271 1265 LLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKL 1343 (1490)
T ss_pred HhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcccc
Confidence 999998 799999999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEE
Q 000553 1317 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILI 1396 (1428)
Q Consensus 1317 dt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~V 1396 (1428)
||.++|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++.+||||+|
T Consensus 1344 dt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlv 1423 (1490)
T TIGR01271 1344 DFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLV 1423 (1490)
T ss_pred ccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1397 LDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1397 l~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
||+|+|+|+|+|++|++ ++|.|++|+++++
T Consensus 1424 L~~G~ivE~g~p~~Ll~-~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1424 IEGSSVKQYDSIQKLLN-ETSLFKQAMSAAD 1453 (1490)
T ss_pred EECCEEEEeCCHHHHHc-CCcHHHHHHHHhC
Confidence 99999999999999997 5789999999875
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4e-185 Score=1875.87 Aligned_cols=1221 Identities=32% Similarity=0.527 Sum_probs=1049.8
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhh-------------------
Q 000553 201 NTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRS------------------- 261 (1428)
Q Consensus 201 ~~~~e~~~~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------- 261 (1428)
.+.||+++||+.|+++.|++|++.+..|..|+.+|||+...+.++-++..++.+..+++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4679999999999999999999999999999999999988888876665555443222100
Q ss_pred --------------------------------c-----------------------------------------------
Q 000553 262 --------------------------------C----------------------------------------------- 262 (1428)
Q Consensus 262 --------------------------------~----------------------------------------------- 262 (1428)
+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ----------CCCCcchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHH
Q 000553 263 ----------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSIL 331 (1428)
Q Consensus 263 ----------~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~~~~~~~~ 331 (1428)
.++..+|+++++++|++.++..++++++.+++.+++|++++.++++++++. ....|+++++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 012347999999999999999999999999999999999999999997633 334578888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 332 KSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVA 409 (1428)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~ 409 (1428)
++++.++|.|...+.+.++|++|...||+|+++++..+.. +.++|+++|+|++|++++..+..++|.+|..|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887664 56889999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHH
Q 000553 410 LYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSS 489 (1428)
Q Consensus 410 ~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~ 489 (1428)
+++||+++|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 490 EVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRL 569 (1428)
Q Consensus 490 El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI 569 (1428)
|++.+++..+..++..++++++|.++.+++|++|.+.+++||++.+||++++|++++.|+.++|..++.+.++.+|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCchh----hhh-----hcCCCCcc----cCC----------------------------------CccCCCC
Q 000553 570 TRFLGCSEYKHE----LEQ-----AANSPSYI----SNG----------------------------------LSNFNSK 602 (1428)
Q Consensus 570 ~~fL~~~e~~~~----~~~-----~~~~~~~~----~~~----------------------------------~~~~~~~ 602 (1428)
++||+.+|.... ... ....+... ..+ .......
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 999987763210 000 00000000 000 0000011
Q ss_pred CceEEEEccEEeecCCCc----------------------------------cccccceeeeeeEecCCCEEEEEcCCCC
Q 000553 603 DMAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGS 648 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~----------------------------------~~~~~~l~~i~l~i~~G~~~~ivG~~Gs 648 (1428)
...+.++|++|+|+.... ...+++|+|+||+|++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 234677888887653110 0123479999999999999999999999
Q ss_pred cHHHHHHHHHcCccCCCeEEEEcCcEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCccccc
Q 000553 649 GKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1428)
Q Consensus 649 GKStll~~llG~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig 728 (1428)
|||||+++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++++++|++++++|+|+.|++.+|+|++|.+|
T Consensus 698 GKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~ 777 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIG 777 (1560)
T ss_pred cHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhc
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeC
Q 000553 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1428)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 808 (1428)
++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|+|||+++.++.||+|++|++
T Consensus 778 ~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 778 EKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999987665 4568999999999999999999999999
Q ss_pred CeEEEecChHHHHhccccCcccccccc---h--hhhhhhh--hhccccc---c-h---hhhhhh-hcccccCCCchhhHH
Q 000553 809 GQVKWIGSSADLAVSLYSGFWSTNEFD---T--SLHMQKQ--EMRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEI 873 (1428)
Q Consensus 809 G~i~~~g~~~el~~~~~~~~~~~~~~~---~--~~~~~~~--~~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~ 873 (1428)
|++.++|+++++.+... +........ . ......+ ....... . . ..+... ...+.........+.
T Consensus 857 G~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 99999999999875421 111110000 0 0000000 0000000 0 0 000000 000000001112344
Q ss_pred HHHHHHhcCcchHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHH
Q 000553 874 IEVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFN 952 (1428)
Q Consensus 874 ~~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~ 952 (1428)
.++|+++.|.++|++|++|++..|... ++.++++.++.+++..++++|+++|++... ......|+++|+++.++.
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHH
Confidence 566778889999999999999877443 344444556677888889999999987431 123356888888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhh
Q 000553 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1032 (1428)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1032 (1428)
.++.+++.+.....+.++++++|++++++++++|++|||++|+|+++|||++|++.+|..++..+..++..++.+++.++
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li 1091 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSIL 1091 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHH
Q 000553 1033 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQ 1112 (1428)
Q Consensus 1033 ~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~ 1112 (1428)
++++..|+++++++|+.++++.++++|.+.+|+++|++..+++|+++++.|+++|+.|||+|+++++|.+++.+..|.+.
T Consensus 1092 ~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~ 1171 (1560)
T PTZ00243 1092 VTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVY 1171 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88888998888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1113 RTSYSELTASLWLSLRLQ-----------------------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLE 1163 (1428)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~-----------------------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sve 1163 (1428)
+..+.....++|+..+++ ++++++|+..+...+.++++.++++|+.++|++
T Consensus 1172 ~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~e 1251 (1560)
T PTZ00243 1172 SCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVE 1251 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888999887654 234556667777888899999999999999999
Q ss_pred HHHhhhcC-Ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEECCCCCccceeeeE
Q 000553 1164 RVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDINF 1214 (1428)
Q Consensus 1164 Ri~~~~~~-~~e~~~~-------------------------~~~~~---~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~ 1214 (1428)
|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+||||
T Consensus 1252 Ri~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf 1331 (1560)
T PTZ00243 1252 RLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSF 1331 (1560)
T ss_pred HHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceE
Confidence 99999964 3332100 01112 2356779999999999998877789999999
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCC
Q 000553 1215 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMND 1294 (1428)
Q Consensus 1215 ~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~ 1294 (1428)
+|+||||||||||||||||||+++|+|+++|++|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++
T Consensus 1332 ~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~s 1411 (1560)
T PTZ00243 1332 RIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEAS 1411 (1560)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccC-CCEEEEeccccCCCHHHHHHHHHHHHH
Q 000553 1295 DLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAISS 1371 (1428)
Q Consensus 1295 d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~-~~ILlLDEaTS~lD~~te~~Iq~~i~~ 1371 (1428)
|+|+|+|+++++++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|++
T Consensus 1412 deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~ 1491 (1560)
T PTZ00243 1412 SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMS 1491 (1560)
T ss_pred HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHH
Confidence 99999999999999999998 999999999999999999999999999996 899999999999999999999999999
Q ss_pred hcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1372 ECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1372 ~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
.|++||||+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.|++|++.+|
T Consensus 1492 ~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1492 AFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALG 1547 (1560)
T ss_pred HCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999987899999999876
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-144 Score=1356.74 Aligned_cols=1129 Identities=21% Similarity=0.278 Sum_probs=834.4
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhccCCC-c--hh--HHH-HHHHHHHHHHHHHHHH-H
Q 000553 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLL---NKLIKFLQQGSG-H--LD--GYV-LAIALGLTSILKSFFD-T 337 (1428)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll---~~li~~~~~~~~-~--~~--g~~-l~~~~~~~~~~~~~~~-~ 337 (1428)
++++-+..+-++++++..+..++..+....+|++. .++.+.+....+ . .. -+. +.+.+.+..++.+++. .
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556677777777777778888888755 344444333111 1 01 111 1112222222222222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000553 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 412 (1428)
Q Consensus 338 ~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~w~~p~~i~i~~~l 412 (1428)
.+.+...|...++|......+ ||...+.++....|++.+-|+.|+++|.++.. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~yl~~i----LrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYLKAI----LRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777655554 66667777777779999999999999998643 344433333334444433
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 000553 413 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 492 (1428)
Q Consensus 413 L~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 492 (1428)
.|++ +++.+.+..++.......++.+.+...+.+++..+.-+...|++++||+|-.|+-|+...++..+.-+.-.+
T Consensus 170 -~W~L---tlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKL---TLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 3333 334444444445556677787888888888888899999999999999999999999888877654333333
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 493 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 570 (1428)
Q Consensus 493 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 570 (1428)
...+......+...+. .+.......++||..++..+..+++.+|+.+.-.-.-...|.+....++.+.+|.++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 3333333333222221 12223345678887777778899999999986666677788888899999999999999999
Q ss_pred HhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcH
Q 000553 571 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1428)
Q Consensus 571 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1428)
+-++.....+.... ++ .......+.|+++|++|+||++++ .++|+|+||+|++|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~---------~~-~~~~~~~g~ief~nV~FsYPsRpd---v~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK---------GG-RVLSSIKGEIEFRNVCFSYPSRPD---VKILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc---------cC-CcccccccceEEEEEEecCCCCCc---chhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 98865432221110 00 011245678999999999998754 345999999999999999999999999
Q ss_pred HHHHHHHHcCccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHH
Q 000553 651 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 716 (1428)
Q Consensus 651 Stll~~llG~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di 716 (1428)
||++++|.|.|+|++|+|.++| +||.|+|+|.||++||+|||.||+| -+.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999987 5999999999999999999999986 4678888899999999999
Q ss_pred hcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch
Q 000553 717 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 796 (1428)
Q Consensus 717 ~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 796 (1428)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||++.++.+ +.++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHH-hhcCCeEEEEeeehhh
Confidence 99999999999999999999999999999999999999999999999999977654 444544 6789999999999999
Q ss_pred hhcCCEEEEEeCCeEEEecChHHHHhccccCcccccccchhhhhh----hhh-hcccccch--hhhhhhhcccc--cCCC
Q 000553 797 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ----KQE-MRTNASSA--NKQILLQEKDV--VSVS 867 (1428)
Q Consensus 797 l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~--~~~~~~~~~~~--~~~~ 867 (1428)
+++||+|++|++|+|+|.|+|+||++..+.+.++....+.....+ +.+ .+....+. ........+.. ....
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 999999999999999999999999988876665432111111000 000 00000000 00000000000 0000
Q ss_pred --chhhHHHHHHHHhcCcchHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCC---CCccchh
Q 000553 868 --DDAQEIIEVEQRKEGRVELTVYKNYAKF--SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQ---TKYSTSF 940 (1428)
Q Consensus 868 --~~~~~~~~~e~~~~g~v~~~~y~~y~~~--~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~ 940 (1428)
...++..++...+.. ....++.-++. ..|..+++.++.+++..+....-.+.+++..+...... .......
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000000 11123333331 14555555545544444433333333333222111001 1112345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccc--CChhhHHHHHhcChhhhhhhhhHHHH
Q 000553 941 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1018 (1428)
Q Consensus 941 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~ 1018 (1428)
|..+|+++++...++.++..+++.+++.+...++|.++|++++++++.|||. +. |.+.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999996 55 99999999999999999999998
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhc
Q 000553 1019 ILLANFVGLLGIAVVLSYVQVFF---LLLLVPFWFIYSKLQFFYR-STSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1094 (1428)
Q Consensus 1019 ~~~~~~~~~l~~~~~~~~~~~~~---~~~~~p~~~~~~~i~~~y~-~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf 1094 (1428)
.++.++..++..+++.++..|-+ .+++.|++++..+.+..+. ..+++.+....+ ......|++++++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~e----a~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEE----ASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHHHhHHHHHHH
Confidence 88888888877777777776655 4456777777666665544 333333332222 224678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH
Q 000553 1095 KSEDYFMAKFKEHVVLYQRTSYS------------------ELTASLWLSLRLQ---------VGLALSYAAPIVSLLGN 1147 (1428)
Q Consensus 1095 ~~e~~~~~~~~~~~~~~~~~~~~------------------~~~~~~wl~~~l~---------~gl~l~~~~~~~~~l~~ 1147 (1428)
+.|++|.+.|.+.++...+.... .+++..|++.++- +-..+.....-...++.
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~ 943 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQ 943 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988887766433 2344556665553 11111111122234566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEEC
Q 000553 1148 FLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVG 1226 (1428)
Q Consensus 1148 ~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvG 1226 (1428)
.....++..++..|+.++++.++.+++-...........+.+|.|+|+||+|+||.. ..+||+|+|++|++||+||+||
T Consensus 944 ~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG 1023 (1228)
T KOG0055|consen 944 ASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVG 1023 (1228)
T ss_pred HHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEEC
Confidence 777888999999999999999988764321111111122468999999999999743 2369999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHc
Q 000553 1227 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKC 1305 (1428)
Q Consensus 1227 rTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~ 1305 (1428)
||||||||++.+|.|+|+|++|.|.|||.||+++++++||++|++|+|||.||++||||||.++. ..+.+||.+|++.+
T Consensus 1024 ~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~A 1103 (1228)
T KOG0055|consen 1024 PSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLA 1103 (1228)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999983 46899999999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEecc
Q 000553 1306 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAH 1383 (1428)
Q Consensus 1306 ~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaH 1383 (1428)
+.+++|.++ ||||.|||+|.+||||||||+|||||++|||||||||||||+||.++|+.+|++|++...++|.|+|||
T Consensus 1104 NaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAH 1183 (1228)
T KOG0055|consen 1104 NAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAH 1183 (1228)
T ss_pred hhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEec
Confidence 999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1384 RISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1384 rl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
||+||++||.|+|+++|+|+|.|+|++|++ ++|.|++|++.+.
T Consensus 1184 RLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1184 RLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred chhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 999999999999999999999999999999 6789999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.4e-132 Score=1341.51 Aligned_cols=1137 Identities=17% Similarity=0.217 Sum_probs=829.8
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
+++-..+.+++.++.+.++.++..++....|+++.++++.+..... ...+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334456667777788888888888899999999987642211 1123334444555566666677778888999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLL-YTQVKFAFVSGLA 426 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL-~~~lg~a~l~g~~ 426 (1428)
++...+...+|+|.++++...++..+.|++.|.++.|++.+..++. .+..+...++.++.++.++ +....++ ++.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~La-lv~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLT-LCITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHH
Confidence 9999999999999999999888888889999999999999888653 3444555554444443332 2222222 22233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1428)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1428)
++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.++..+..+.-.+...+.....++...
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445567778888888888888899999999999999999999999999998876654444444444444444322
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCC--------CCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 000553 507 FWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 576 (1428)
Q Consensus 507 ~~~~~--~~~~~~~~f~~y~~~~~--------~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 576 (1428)
+.... ...+.++++|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22344567888877653 588888888765554445556666667889999999999999999765
Q ss_pred CCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHH
Q 000553 577 EYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNS 656 (1428)
Q Consensus 577 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~ 656 (1428)
+..+.... ... . +....|+++|++|+|+++++ .++|+|+||+|++||+++|+||||||||||+++
T Consensus 366 ~~~~~~~~--~~~---------~-~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 366 PLVENNDD--GKK---------L-KDIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred CCCCCCCC--Ccc---------C-CCCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 42211000 000 0 11136999999999985422 246999999999999999999999999999999
Q ss_pred HHcCccCCCeEEEEc-C-------------cEEEEcCCCCCCcccHHHHHhcCCC-------------------------
Q 000553 657 ILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN------------------------- 697 (1428)
Q Consensus 657 llG~~~~~~G~i~~~-~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~------------------------- 697 (1428)
|+|.++|++|+|.++ | +||||+|+|.+|++||+|||.+|..
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 999999999999994 3 4899999999999999999999741
Q ss_pred ---------------------------------CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHH
Q 000553 698 ---------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1428)
Q Consensus 698 ---------------------------------~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 744 (1428)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 23356777888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEeCC--------------
Q 000553 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKG-------------- 809 (1428)
Q Consensus 745 ARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G-------------- 809 (1428)
|||++++|+|||||||||+||+++++.+.+. +.... .+++|+|+|||+++.+..||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKT-INNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999988776 43311 2478999999999999999999999886
Q ss_pred ---------------------------------eEEEecChHHHHh-ccccCcccccccchhhhhh-----hhhh---cc
Q 000553 810 ---------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM---RT 847 (1428)
Q Consensus 810 ---------------------------------~i~~~g~~~el~~-~~~~~~~~~~~~~~~~~~~-----~~~~---~~ 847 (1428)
+|+|+|+|+||++ ..+.+..+........... .... ..
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999997 3454444321110000000 0000 00
Q ss_pred c-ccch-h---h--hhh--hhccc-----ccCCCchh-hHHHHH------HHH--hcCcc--hHHHHHHHHhhhhHHHHH
Q 000553 848 N-ASSA-N---K--QIL--LQEKD-----VVSVSDDA-QEIIEV------EQR--KEGRV--ELTVYKNYAKFSGWFITL 902 (1428)
Q Consensus 848 ~-~~~~-~---~--~~~--~~~~~-----~~~~~~~~-~~~~~~------e~~--~~g~v--~~~~y~~y~~~~g~~~~~ 902 (1428)
. .... . . ... ..... .....++. .+...+ ++. ..... .+..+..+++...+. ++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD-VT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH-HH
Confidence 0 0000 0 0 000 00000 00000000 000000 000 00001 111222333222222 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCC-CCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000553 903 VICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 981 (1428)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 981 (1428)
+.++++++..++....++.++.+++.... .........|..++++++++..++.+++.++..+.+.+...+++.+++++
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444444555555566666542211 00111234567777788888888899999999999999999999999999
Q ss_pred ccCCCcccccc--CChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 982 IVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFY 1059 (1428)
Q Consensus 982 vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y 1059 (1428)
+++.|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++..|.++++++|+.++........
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999996 8899999999999999999988888888888888888878778888877766665544332221111
Q ss_pred HH--HHHHHHHH-------------HHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH----
Q 000553 1060 RS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT---- 1120 (1428)
Q Consensus 1060 ~~--~sr~l~rl-------------~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~---- 1120 (1428)
.+ ..++.++. +.+..+.....++|+++|++|||+|+.|+++.+++.+..+...+.......
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11121111 122234566789999999999999999999999999888776655443211
Q ss_pred --------------HHHHHHHHHH------HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc
Q 000553 1121 --------------ASLWLSLRLQ------VGLALS---YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC 1177 (1428)
Q Consensus 1121 --------------~~~wl~~~l~------~gl~l~---~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~ 1177 (1428)
...|++..+- +|-.+. +.+.....+..+...+.+++.+..+.+|+.++++.+++...
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~ 1148 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDV 1148 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 1223333221 222211 12222234567778889999999999999999987654211
Q ss_pred cC-CCCC--CCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--------
Q 000553 1178 GY-QSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-------- 1245 (1428)
Q Consensus 1178 ~~-~~~~--~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-------- 1245 (1428)
.. .... ...+.+|.|+|+||+|+|++. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1149 ~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~ 1228 (1466)
T PTZ00265 1149 RDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVF 1228 (1466)
T ss_pred CCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccc
Confidence 11 1111 112346889999999999743 24799999999999999999999999999999999999999
Q ss_pred ----------------------------------------------CCceEEECCeeCCCCChHhHhcceEEEeCCcccc
Q 000553 1246 ----------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1279 (1428)
Q Consensus 1246 ----------------------------------------------~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1279 (1428)
++|+|+|||+||++++++++|++|+||||||+||
T Consensus 1229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF 1308 (1466)
T PTZ00265 1229 KNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF 1308 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc
Confidence 6999999999999999999999999999999999
Q ss_pred CCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccC
Q 000553 1280 EGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTAN 1356 (1428)
Q Consensus 1280 ~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~ 1356 (1428)
+|||||||.++. ..+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+|||||||||+
T Consensus 1309 ~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSa 1388 (1466)
T PTZ00265 1309 NMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSS 1388 (1466)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 999999999884 47999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeC----CeE-EEecChhHHhccCCcHHHHHHHhh
Q 000553 1357 VDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-VEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1357 lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~----G~i-ve~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++++|.|++|++.+
T Consensus 1389 LD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1389 LDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred cCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99999999999999873 69999999999999999999999999 995 599999999986578999999865
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.9e-87 Score=798.66 Aligned_cols=534 Identities=26% Similarity=0.378 Sum_probs=439.8
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCC-CCCCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 964 (1428)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 964 (1428)
+...+.|.+.-.+++...+ ++.++......+.+.++...++.... ............+..++.+..+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~-~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAF-VLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHH-HHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445554444333333 23333344455555555544443221 111122233455667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH-
Q 000553 965 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL- 1043 (1428)
Q Consensus 965 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~- 1043 (1428)
+.+.+...+++..+|++++++.++|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|-+.+
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998886544
Q ss_pred --HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1044 --LLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1428)
Q Consensus 1044 --~~~p~-~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1120 (1428)
+.+|+ .++...+.++|++.+++.+. +-+.......|.+++++|||+|+.|++..++|.+.+++..+..-+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q~----a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQD----ALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333 34455566667777776654 344455778899999999999999999999998888776554432211
Q ss_pred ---HHHHH---------------HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 000553 1121 ---ASLWL---------------SLRLQ---------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQ 1173 (1428)
Q Consensus 1121 ---~~~wl---------------~~~l~---------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~ 1173 (1428)
.-.|. +..+- +--.+.|...+...+.++...|+++.+.++|.+|++|++|.+|
T Consensus 370 a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P 449 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKP 449 (716)
T ss_pred HhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCC
Confidence 11121 11111 2234567778888999999999999999999999999999876
Q ss_pred cccccCCCCCCCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEE
Q 000553 1174 EELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1252 (1428)
Q Consensus 1174 e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~I 1252 (1428)
.-... ....+. ..+|.|+|+||+|+||.. ..+||||+||+|+|||+||+||||||||||++++|+|+|+|++|+|++
T Consensus 450 ~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 450 RIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 53222 111122 568999999999999754 346999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCCh
Q 000553 1253 DGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSV 1329 (1428)
Q Consensus 1253 DG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSg 1329 (1428)
||+||++++.++||++||+|.|||+||+|||||||.++. ..+||||.+|.++++.++||.++ |+||.|||+|..|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 999999999999999999999999999999999998875 46899999999999999999999 999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChh
Q 000553 1330 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQ 1409 (1428)
Q Consensus 1330 GQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~ 1409 (1428)
|||||+||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+.+|+|+|+|+|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCcHHHHHHHhh
Q 000553 1410 TLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1410 eLl~~~~s~f~~l~~~~ 1426 (1428)
||+++++|.|++|++++
T Consensus 688 eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred HHhhCcccHHHHHHHHh
Confidence 99999999999999875
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3e-78 Score=757.26 Aligned_cols=515 Identities=28% Similarity=0.439 Sum_probs=430.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000553 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1428)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1428)
++..++.+.+..++++..+..+|..-..............++++++...++.+++.+++...+.|....+-.++++++++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~ 239 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLR 239 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 34555666677777777777766432111122222233456667778889999999999999999999999999999999
Q ss_pred CCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Q 000553 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY----SKLQFFYR 1060 (1428)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~----~~i~~~y~ 1060 (1428)
.|++||.++++|++++|+ +|++.|.+.+...+...+..+...+..++++.+.+|.++++.+...+++ ...+.+.+
T Consensus 240 Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~ 318 (709)
T COG2274 240 LPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLR 318 (709)
T ss_pred CcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 4688888877777666666666666666666666665544433333322 33344444
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH------------------H
Q 000553 1061 STSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA------------------S 1122 (1428)
Q Consensus 1061 ~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 1122 (1428)
+..++. .+..+...++..|++.|+.|||+.+.|.++..++++..++..+..+..... -
T Consensus 319 ~~~~~~----~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~i 394 (709)
T COG2274 319 RKTRKL----IEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLI 394 (709)
T ss_pred HHHHHH----HHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 344455678999999999999999999999999999998888877664332 2
Q ss_pred HHHHHHHH------HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEE
Q 000553 1123 LWLSLRLQ------VGLALS---YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1193 (1428)
Q Consensus 1123 ~wl~~~l~------~gl~l~---~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1193 (1428)
.|++..+- +|..+. ....+++.+..++..|+++.....+.+|+.+.++.|+|+..+.. +...|+.+|.|+
T Consensus 395 L~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~g~I~ 473 (709)
T COG2274 395 LWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQGEIE 473 (709)
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccCceEE
Confidence 45554432 443332 34567778889999999999999999999999999998643322 345567899999
Q ss_pred EEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEe
Q 000553 1194 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1273 (1428)
Q Consensus 1194 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1273 (1428)
|+||+|+|+++.+++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++|++||
T Consensus 474 ~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 474 FENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred EEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEc
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000553 1274 QSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1350 (1428)
Q Consensus 1274 Qdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlL 1350 (1428)
||++||+||||||+..++. .+|||+++|++.+|.++++.++ ||||.++|+|.|||||||||++|||||+++|+||||
T Consensus 554 Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlL 633 (709)
T COG2274 554 QDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLL 633 (709)
T ss_pred ccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEE
Confidence 9999999999999998775 4679999999999999999999 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1351 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1351 DEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
|||||+||++||+.|.+.|.+..++||+|+||||+++++.||||+|||+|+|+|.|+|+||++. +|.|+++++.+
T Consensus 634 DEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 634 DEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred eCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999997 68999999765
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.3e-75 Score=741.95 Aligned_cols=515 Identities=27% Similarity=0.420 Sum_probs=419.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1428)
++.++........++++....+... ........+...++++.++..++.+...+...+.+.+...+++.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344445555555666655444322 01112223444455555566677777777777788999999999999999999
Q ss_pred CccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
|+++|+.+++|++++|+++|++.++..+......+...++.+++.++++....|.+.++++....++......+.+..+.
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888775555556777777777777777766655544444444444444444466
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHH
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS------------------LWLSL 1127 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~------------------~wl~~ 1127 (1428)
..+....+.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+......... .|++.
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667777889999999999999999999999887777766665544432211111 11111
Q ss_pred HH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1128 RL------Q---VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1128 ~l------~---~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
.+ . +...+.+...+...+..+...+..++....|.+|+.++.+.+++...... +.++..|.|+|+||+
T Consensus 259 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~---~~~~~~~~I~f~~vs 335 (567)
T COG1132 259 FLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD---PLKDTIGSIEFENVS 335 (567)
T ss_pred HHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC---CCCCCCCeEEEEEEE
Confidence 11 0 22344566666777888888899999999999999999998665322111 134567889999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||++++.+++|++|++|||||+|
T Consensus 336 f~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~L 414 (567)
T COG1132 336 FSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLL 414 (567)
T ss_pred EEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccccee
Confidence 99975 35799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1279 FEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1279 f~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
|+||||+||+++++ .+|||+++|++.++++|+++++ |+||.+||+|.+||||||||+|||||++|+|+|||||||||
T Consensus 415 F~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTS 494 (567)
T COG1132 415 FSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATS 494 (567)
T ss_pred ecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEecccc
Confidence 99999999999976 6999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1356 NVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
++|++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.++
T Consensus 495 alD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 495 ALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 99999999999999988889999999999999999999999999999999999999997 689999998765
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.1e-74 Score=730.76 Aligned_cols=533 Identities=19% Similarity=0.255 Sum_probs=416.5
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1428)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1428)
++.|.+...+... +.+++.++..++....++.+.+..+.....+.. .....++.+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLN-LSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445554333322 222344455555555666666555432100111 11223344455556667777788888888899
Q ss_pred HHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000553 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1428)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1428)
.+...+++.++++++++.|.++|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|.++++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888888877777777777777777766554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000553 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW--- 1124 (1428)
Q Consensus 1048 ~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w--- 1124 (1428)
..++...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+++.+++.+..++..+..........+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444556677889999999999999999999999999988777766554332211111
Q ss_pred ----------------HHHHHH----HHH-------H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 000553 1125 ----------------LSLRLQ----VGL-------A-----LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1172 (1428)
Q Consensus 1125 ----------------l~~~l~----~gl-------~-----l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~ 1172 (1428)
.+..+. +|. . +.++..+...+..+...+.++.....+.+|+.++++.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 331 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETP 331 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 110100 110 0 01222344566677778888999999999999999877
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEE
Q 000553 1173 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1252 (1428)
Q Consensus 1173 ~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~I 1252 (1428)
+++...... +...+..+.|+|+||+|.|+++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++|+|++
T Consensus 332 ~~~~~~~~~-~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i 408 (588)
T PRK11174 332 LAHPQQGEK-ELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKI 408 (588)
T ss_pred CcccCCCcc-ccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEE
Confidence 643211111 1111234679999999888654 57999999999999999999999999999999999999 99999999
Q ss_pred CCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCCh
Q 000553 1253 DGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSV 1329 (1428)
Q Consensus 1253 DG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSg 1329 (1428)
||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+|+++|++.++++++++++ |+||.+||+|.+|||
T Consensus 409 ~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSG 488 (588)
T PRK11174 409 NGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSV 488 (588)
T ss_pred CCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCH
Confidence 999999999999999999999999999999999999884 58999999999999999999999 999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChh
Q 000553 1330 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQ 1409 (1428)
Q Consensus 1330 GQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~ 1409 (1428)
|||||++||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+++|.|+|+
T Consensus 489 GQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~~ 568 (588)
T PRK11174 489 GQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDYA 568 (588)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCHH
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHhccCCcHHHHHHHhh
Q 000553 1410 TLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1410 eLl~~~~s~f~~l~~~~ 1426 (1428)
||+++ +|.|++|++.+
T Consensus 569 eL~~~-~~~y~~l~~~q 584 (588)
T PRK11174 569 ELSQA-GGLFATLLAHR 584 (588)
T ss_pred HHHhc-chHHHHHHHHh
Confidence 99986 46999999765
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.3e-74 Score=741.34 Aligned_cols=516 Identities=26% Similarity=0.377 Sum_probs=419.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000553 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1428)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 982 (1428)
..+++.++...+....+++....++..............+.+++++.++..++..++.+.+.+.+.+...++++++++++
T Consensus 165 ~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~l 244 (711)
T TIGR00958 165 SAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSL 244 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555666666667777766654321111111122334455556667777888888889999999999999999999
Q ss_pred cCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1428)
Q Consensus 983 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~ 1062 (1428)
++.|.+||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+.
T Consensus 245 l~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~ 324 (711)
T TIGR00958 245 LRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKR 324 (711)
T ss_pred HcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988888888888888888888888876655444444333444444444
Q ss_pred HHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH-------------
Q 000553 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL---TASLWLS------------- 1126 (1428)
Q Consensus 1063 sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~---~~~~wl~------------- 1126 (1428)
.++..+...+..+...+++.|+++|++|||+|++|+++.+++.+..++..+...... ....|..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 404 (711)
T TIGR00958 325 YQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLY 404 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555667899999999999999999999999999888877665543321 1111211
Q ss_pred --HHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEE
Q 000553 1127 --LRL------QV---GLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQ 1195 (1428)
Q Consensus 1127 --~~l------~~---gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~ 1195 (1428)
..+ .+ ..++.|...+...+..+...+.++.++..+.+|+.++++.+++...... ...++.+|.|+|+
T Consensus 405 ~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~I~~~ 482 (711)
T TIGR00958 405 YGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNLEGLIEFQ 482 (711)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCCCCeEEEE
Confidence 110 02 2334456667778888999999999999999999999987765422111 1224567889999
Q ss_pred EEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeC
Q 000553 1196 NVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1274 (1428)
Q Consensus 1196 nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1274 (1428)
||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|++|||
T Consensus 483 nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 562 (711)
T TIGR00958 483 DVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQ 562 (711)
T ss_pred EEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEec
Confidence 999999753 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1275 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1275 dp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||++||||++++|+|||||
T Consensus 563 ~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILD 642 (711)
T TIGR00958 563 EPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILD 642 (711)
T ss_pred CccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 99999999999998764 46899999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||++++ |.|++|+
T Consensus 643 EpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~-~~y~~lv 711 (711)
T TIGR00958 643 EATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQ-GCYKHLV 711 (711)
T ss_pred ccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCC-CchHhcC
Confidence 9999999999999999 3445799999999999999999999999999999999999999864 6898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.9e-73 Score=735.35 Aligned_cols=513 Identities=22% Similarity=0.267 Sum_probs=411.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1428)
+..++..+.....++.++...|..-..........+..+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555566666655553211111111222344555566667788888889999999999999999999999999
Q ss_pred CccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
|++||++.++|++++|++ |++.+.+.+...+...+..+..+++.++++++.+|+++++++.+.+++..+.....+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888877766666666665666666667777766554444333333333233222223
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ--------------- 1130 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~--------------- 1130 (1428)
..+......+...+++.|+++|+.|||+|+.|+++.+++.+..++..+..+.....+.|......
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556789999999999999999999999999988888777666554433333221111
Q ss_pred ---------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1131 ---------VGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1131 ---------~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
+|. +..+...+...+..+...+.++.....+.+|+.++++.++|...... ...+..|.|+|+||+
T Consensus 382 ~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~---~~~~~~~~I~~~nvs 458 (686)
T TIGR03797 382 SLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAKT---DPGKLSGAIEVDRVT 458 (686)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcC---CCCCCCceEEEEEEE
Confidence 222 22344455667778888999999999999999999987766432111 112346789999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|++|||||++
T Consensus 459 f~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~l 538 (686)
T TIGR03797 459 FRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRL 538 (686)
T ss_pred EEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCcc
Confidence 99986667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccC
Q 000553 1279 FEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTAN 1356 (1428)
Q Consensus 1279 f~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~ 1356 (1428)
|+|||||||.++++.+|+++++|++.++++++++++ |+||.+||+|.+||||||||++||||++++|+|||||||||+
T Consensus 539 f~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~ 618 (686)
T TIGR03797 539 MSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSA 618 (686)
T ss_pred CcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 999999999988778999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1357 VDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1357 lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
||++||+.|++.|++. ++|+|+||||++++..||||+|||+|+|+|.|+|+||+++ +|.|++|++.
T Consensus 619 LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 619 LDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHh
Confidence 9999999999999886 6899999999999999999999999999999999999985 5799999975
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=7.8e-73 Score=734.74 Aligned_cols=513 Identities=22% Similarity=0.319 Sum_probs=414.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000553 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1428)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 986 (1428)
..++..+.....+++.+...|.....+.......+...++++.++..++.+++.++....+.+...+++.++++++++.|
T Consensus 162 ~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~ 241 (710)
T TIGR03796 162 AGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLP 241 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444555555566666655532111111112233444555566677888888999999999999999999999999999
Q ss_pred ccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1428)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l 1066 (1428)
++||++.++|++++|++.| +.+.+.+...+...+..++.+++.++++++.+|+++++++..++++..+...+.+..+..
T Consensus 242 ~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~ 320 (710)
T TIGR03796 242 VRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDA 320 (710)
T ss_pred HHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 567777777777777777777777777778888776665555444444444444444444
Q ss_pred HHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHH
Q 000553 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL------------------SLR 1128 (1428)
Q Consensus 1067 ~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl------------------~~~ 1128 (1428)
.+......+...+++.|+++|+.+||++|+|+.+.+++.+..++..+..+.......|. +..
T Consensus 321 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~ 400 (710)
T TIGR03796 321 NRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGL 400 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556678899999999999999999999999998877666555544332222211 111
Q ss_pred H------HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccC----C-CCCCCCCCCccEEE
Q 000553 1129 L------QVGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQGLIEF 1194 (1428)
Q Consensus 1129 l------~~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~----~-~~~~~wp~~g~I~f 1194 (1428)
+ .+|. +..+...+...+..+...+.++.....+++|+.++++.++|..... . ...+.++.+|.|+|
T Consensus 401 ~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~ 480 (710)
T TIGR03796 401 RVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVEL 480 (710)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEE
Confidence 1 0222 2334455666778888899999999999999999998877653221 0 01111345689999
Q ss_pred EEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeC
Q 000553 1195 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1274 (1428)
Q Consensus 1195 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1274 (1428)
+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||
T Consensus 481 ~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 481 RNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred EEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 99999998766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1275 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1275 dp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
||++|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 561 ~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLD 640 (710)
T TIGR03796 561 DIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILD 640 (710)
T ss_pred CChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEE
Confidence 99999999999998875 57899999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
||||+||++||+.|.+.|++ .++|+|+||||++++..||||+|||+|+|+|.|+|+||+++ ++.|++|+
T Consensus 641 EptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 641 EATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAV-GGAYARLI 709 (710)
T ss_pred CccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHc-CCcHHHHh
Confidence 99999999999999999987 58999999999999999999999999999999999999985 56899987
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.9e-72 Score=730.23 Aligned_cols=533 Identities=26% Similarity=0.373 Sum_probs=417.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1428)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1428)
+..+..|++...+.. ...++..++..++....+++++.+.|.............+..+++++.++..++.+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444554333322 2233445555566666777888777643211111111223334445556667788888888999
Q ss_pred HHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000553 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1428)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1428)
.+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+.+.+...+...+..++.++..++++.+.+|.+++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 88888776665555555555555555566666666655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000553 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS--- 1122 (1428)
Q Consensus 1046 ~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~--- 1122 (1428)
+..++++..+...+.+..++..+......+...+++.|+++|+.|||+||.|+.+.+++.+..+...+..+......
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43333333333344444444444555566677889999999999999999999999988877766555443322111
Q ss_pred ---------------HHHHHHHH------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccccc
Q 000553 1123 ---------------LWLSLRLQ------VGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1178 (1428)
Q Consensus 1123 ---------------~wl~~~l~------~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~ 1178 (1428)
.|++..+- +|. +..+...+...+..+...+.++.....+++|+.++++.|+|....
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 461 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK 461 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 11111111 222 233445566777888889999999999999999999887765322
Q ss_pred CCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC
Q 000553 1179 YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII 1258 (1428)
Q Consensus 1179 ~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~ 1258 (1428)
. .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++||+|++
T Consensus 462 ~-~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 539 (708)
T TIGR01193 462 K-KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLK 539 (708)
T ss_pred c-cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHH
Confidence 1 112234557899999999999743 57999999999999999999999999999999999999999999999999999
Q ss_pred CCChHhHhcceEEEeCCccccCCcHHHhcCcC--CCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHH
Q 000553 1259 NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1259 ~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~--~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQr 1334 (1428)
+++.+++|++|+||||||++|+|||||||.++ ...+|++++++++.++++++++++ ||||.++|+|.+||||||||
T Consensus 540 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQR 619 (708)
T TIGR01193 540 DIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQR 619 (708)
T ss_pred HcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHH
Confidence 99999999999999999999999999999987 357899999999999999999998 99999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++||||++++|+|||||||||+||++|++.+++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|+||+++
T Consensus 620 ialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~ 698 (708)
T TIGR01193 620 IALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR 698 (708)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999999874 78999999999999999999999999999999999999986
Q ss_pred CCcHHHHHHH
Q 000553 1415 ECSVFSSFVR 1424 (1428)
Q Consensus 1415 ~~s~f~~l~~ 1424 (1428)
+|.|++|++
T Consensus 699 -~~~y~~l~~ 707 (708)
T TIGR01193 699 -NGFYASLIH 707 (708)
T ss_pred -CCcHHHHhh
Confidence 579999986
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.5e-72 Score=712.23 Aligned_cols=516 Identities=24% Similarity=0.366 Sum_probs=412.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000553 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSF---YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLT 980 (1428)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~---~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~ 980 (1428)
.+++.++........++++....+....... ..... ++.+++++.++..++.+++.+.....+.+...+++.++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 106 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMD 106 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555666666677777777664211111 11111 1222344444556667777778888899999999999999
Q ss_pred cccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 981 KIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYR 1060 (1428)
Q Consensus 981 ~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~ 1060 (1428)
++++.|.++|+..+.|++++|+++|++.+++.+...+..++..+..+++.++++.+.+|++.++++..+.+...+...+.
T Consensus 107 ~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~ 186 (592)
T PRK10790 107 AALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQ 186 (592)
T ss_pred HHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998888888888777777777777777655433222221222222222
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Q 000553 1061 STSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL----------------- 1123 (1428)
Q Consensus 1061 ~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 1123 (1428)
+..+...+......+....++.|+++|+.+||+||.++++.+++.+..+...+..+.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (592)
T PRK10790 187 RYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCG 266 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223333333334556778999999999999999999999998888776655544332211111
Q ss_pred ---HHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEE
Q 000553 1124 ---WLSLRLQ----VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1193 (1428)
Q Consensus 1124 ---wl~~~l~----~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1193 (1428)
|.+..+. +| ..+.+...+...+..+...+.++++...+.+|+.++++.++++.... ..++..+.|+
T Consensus 267 ~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~~~i~ 342 (592)
T PRK10790 267 LLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQSGRID 342 (592)
T ss_pred HHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCCCeEE
Confidence 1111000 12 22334445667778888899999999999999999998765432111 1233457899
Q ss_pred EEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEe
Q 000553 1194 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1273 (1428)
Q Consensus 1194 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1273 (1428)
|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.+|++|+|||
T Consensus 343 ~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~ 421 (592)
T PRK10790 343 IDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQ 421 (592)
T ss_pred EEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEc
Confidence 99999999754 57999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1274 QSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1274 Qdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
|||.+|+||||+||.+++..+|++++++++++|++++++.+ ||||.++|+|.+||||||||++||||++++|+|||||
T Consensus 422 Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlD 501 (592)
T PRK10790 422 QDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILD 501 (592)
T ss_pred cCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99999999999999999888999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||++++ +.|++|++.+
T Consensus 502 Epts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~-~~y~~l~~~~ 575 (592)
T PRK10790 502 EATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ-GRYWQMYQLQ 575 (592)
T ss_pred CCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC-CHHHHHHHHH
Confidence 9999999999999999999988899999999999999999999999999999999999999875 7999999754
No 18
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.9e-74 Score=720.81 Aligned_cols=489 Identities=23% Similarity=0.331 Sum_probs=406.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHH
Q 000553 937 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1016 (1428)
Q Consensus 937 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1016 (1428)
....+...|..+++...+..++...++.+.+.|...+++.+.+++++|++++|||.+..|++..|++.|++.+++.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34556777788888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCc
Q 000553 1017 LNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKS 1096 (1428)
Q Consensus 1017 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~ 1096 (1428)
+..++..+...++.+++.++..|.+.++++++..+.......+.+..-.....+..+.+.--+...|++.+++|+.+|+-
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999998888888888888888776655544433333222232222222222333334445678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHH------HH---HHHHHHHHHHHHHHHHH
Q 000553 1097 EDYFMAKFKEHVVLYQRTSYSEL------------------TASLWLSLRLQ------VG---LALSYAAPIVSLLGNFL 1149 (1428)
Q Consensus 1097 e~~~~~~~~~~~~~~~~~~~~~~------------------~~~~wl~~~l~------~g---l~l~~~~~~~~~l~~~i 1149 (1428)
|+...++|.+.++...+...... ....|++..+- .| ..+...+.-...++...
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~ 308 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQAS 308 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccc
Confidence 99999999999998888754432 22233332221 00 00111122223455556
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCC-CccceeeeEEEeCCcEEEEECCC
Q 000553 1150 SSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRT 1228 (1428)
Q Consensus 1150 ~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIvGrT 1228 (1428)
..+..+.+...|..++.+.++-.++............-.+|.|+|+||+|+||... .++|+|+||+|++||.||+||+|
T Consensus 309 p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~S 388 (1228)
T KOG0055|consen 309 PHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPS 388 (1228)
T ss_pred cchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCC
Confidence 66777788889999999998765543211111112223579999999999998553 37999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccH
Q 000553 1229 GAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHV 1307 (1428)
Q Consensus 1229 GSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l 1307 (1428)
||||||++++|.|+|+|++|+|+|||.|+++++.++||++||+|.|||+||++||+|||.++. ..+++|+.+|++.++.
T Consensus 389 GsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana 468 (1228)
T KOG0055|consen 389 GSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANA 468 (1228)
T ss_pred CCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccH
Confidence 999999999999999999999999999999999999999999999999999999999999887 4689999999999999
Q ss_pred HHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000553 1308 KEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1385 (1428)
Q Consensus 1308 ~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl 1385 (1428)
++++..+ |+||.+||+|..||||||||+||||||+|+|+|||||||||+||+++|+.+|++|++..+|+|.|+|||||
T Consensus 469 ~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRL 548 (1228)
T KOG0055|consen 469 HDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRL 548 (1228)
T ss_pred HHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeeh
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1386 STVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1386 ~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
+||+++|+|+||++|+|+|.|+|+||++++ |.|++|++.+
T Consensus 549 StIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 549 STIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred hhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 999999999999999999999999999987 8999999865
No 19
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.8e-71 Score=707.75 Aligned_cols=517 Identities=25% Similarity=0.361 Sum_probs=417.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1428)
++.++..++....+++++.+.+.............+...++++.++..++.+++.+...+.+.+....++.++++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444444445556666655553221111111111222333455666677777777788888999999999999999999
Q ss_pred CccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
|..+|+....|++++|+++|++.+...+...+..++..++.+++.++++.+.+|+++++++..++++..+.....+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888888888888888877777776655444444433333333333344
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ--------------- 1130 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~--------------- 1130 (1428)
..+......+.+.+++.|.++|+.+||+|+.++.+.+++.+..+...+..........+.....+
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455667889999999999999999999999999988887776665443322222111110
Q ss_pred ---------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1131 ---------VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1131 ---------~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
+| .++.+...+...+..+...+.++.....+.+|+.++.+.+++...+.. ...|..+.|+|+||+
T Consensus 272 ~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~~~vs 348 (582)
T PRK11176 272 FPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEFRNVT 348 (582)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEEEEEE
Confidence 22 234455566777888889999999999999999999987665322111 122445789999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|+||||||++
T Consensus 349 f~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~l 428 (582)
T PRK11176 349 FTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHL 428 (582)
T ss_pred EecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCcee
Confidence 99987667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000553 1279 FEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1354 (1428)
Q Consensus 1279 f~gTIR~NLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaT 1354 (1428)
|+|||||||..+. .++|++++++++.++++++++++ ||||.+||+|.+||||||||++||||++++|+||||||||
T Consensus 429 f~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEpt 508 (582)
T PRK11176 429 FNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT 508 (582)
T ss_pred ecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECcc
Confidence 9999999998753 47899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1355 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1355 S~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
|+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++ +.|++|++.+
T Consensus 509 saLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~~~ 579 (582)
T PRK11176 509 SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHKMQ 579 (582)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHHHH
Confidence 9999999999999999988899999999999999999999999999999999999999865 6999999753
No 20
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.6e-71 Score=714.96 Aligned_cols=507 Identities=24% Similarity=0.345 Sum_probs=404.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1428)
++.++..++....++.++..+|.............+..+++++.++..++.+++.++....+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444555556666666666553211111111122233444455567778888889999999999999999999999999
Q ss_pred CccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
|++| ++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|+++++.+..++++..+..++.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999999887776666666666666666666777766554433333333333333333334
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHH
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL------------------WLSL 1127 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~------------------wl~~ 1127 (1428)
..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.....+. |++.
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445666778999999999999999999999999998887776555444322211 1111
Q ss_pred HHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1128 RLQ------VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1128 ~l~------~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
.+- +| .++.+...+...+..+...+.++.....+++|+.++++.++|...... .....+..|.|+|+||+
T Consensus 392 ~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~I~~~~vs 470 (694)
T TIGR03375 392 YLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGEIEFRNVS 470 (694)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccceEEEEEEE
Confidence 110 22 223344556677788888999999999999999999988776432111 11112346789999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++++|||||++
T Consensus 471 f~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~l 550 (694)
T TIGR03375 471 FAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRL 550 (694)
T ss_pred EEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhh
Confidence 99986667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1279 FEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1279 f~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
|+|||||||.+++. .+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|||||||||
T Consensus 551 f~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts 630 (694)
T TIGR03375 551 FYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTS 630 (694)
T ss_pred hhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 99999999998865 7899999999999999999998 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1356 NVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+||++|++.|++.|++..+++|+|+||||++++..||||+||++|+++|.|+|+||+++.
T Consensus 631 ~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~~ 690 (694)
T TIGR03375 631 AMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEAL 690 (694)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHHh
Confidence 999999999999999988999999999999999999999999999999999999998753
No 21
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-70 Score=695.09 Aligned_cols=478 Identities=22% Similarity=0.307 Sum_probs=393.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHH
Q 000553 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1024 (1428)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1024 (1428)
+.++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.++..+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677777777888899999999999999999999999999999999999999999999999988888888888
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHH
Q 000553 1025 VGLLGIAVVLSYVQVFFLLLLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1103 (1428)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~p~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~ 1103 (1428)
+.+++.++++++.+|.++++++..+ +++..+..++.+..+...+....+.+.+.+.+.|+++|+++||+|+.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 8888888888888887765443222 222222233334434444444556677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHH---HH-HHHHHHHHHHHHHHHHHH
Q 000553 1104 FKEHVVLYQRTSYSELTASLWLSLRLQ-----------------------VGLALS---YA-APIVSLLGNFLSSFTETE 1156 (1428)
Q Consensus 1104 ~~~~~~~~~~~~~~~~~~~~wl~~~l~-----------------------~gl~l~---~~-~~~~~~l~~~i~~~~~~e 1156 (1428)
+.+..++..+..+.......+.....+ +|..+. |. ......+..+...+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~ 305 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLG 305 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888776665544332222111111 111111 11 111234455566677888
Q ss_pred HHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHH
Q 000553 1157 KEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSIL 1236 (1428)
Q Consensus 1157 ~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~ 1236 (1428)
....+.+|+.++++.++|.......+ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+
T Consensus 306 ~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~ 383 (574)
T PRK11160 306 QVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLL 383 (574)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHH
Confidence 88999999999998776532111111 1234578999999999976556799999999999999999999999999999
Q ss_pred HHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHh-C
Q 000553 1237 NALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEA-V 1314 (1428)
Q Consensus 1237 ~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~-l 1314 (1428)
++|.|+++|++|+|++||+|+++++.+++|++|++|||||++|+|||||||..+. ..+|++++++++++++++++++ .
T Consensus 384 ~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~p~ 463 (574)
T PRK11160 384 QLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLEDDK 463 (574)
T ss_pred HHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcCcc
Confidence 9999999999999999999999999999999999999999999999999998765 4689999999999999999885 4
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEE
Q 000553 1315 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEI 1394 (1428)
Q Consensus 1315 gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI 1394 (1428)
||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|
T Consensus 464 GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i 543 (574)
T PRK11160 464 GLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRI 543 (574)
T ss_pred ccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred EEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1395 LILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1395 ~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
++|++|+++|.|+|+||+++ +|.|++|++.
T Consensus 544 ~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred EEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 99999999999999999986 5799999874
No 22
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.2e-70 Score=681.30 Aligned_cols=543 Identities=23% Similarity=0.286 Sum_probs=469.1
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1428)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1428)
+-++..++-+++.+.-..+..++..++.++.|++.+.++|.+-.+.+......+++++.+..++.+++.....+...+++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666678888888999999999999999999999999877666777788888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000553 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1428)
Q Consensus 348 ~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~ 425 (1428)
.|+...+...+|+|.|++|...++++++|++++.++ |.+.|.+++.. +..+...++-++. +.+++.+-+.-+++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~-l~vm~~ys~~L~li~l 300 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIF-LAVMFLYSWKLTLIVL 300 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999885 78888886543 2333334444333 4444455555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1428)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1428)
+.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+-|+.+..++++.-.+.++...+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 66667777788888999999999999999999999999999999999999999999999988888888888777766665
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000553 506 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1428)
Q Consensus 506 ~~~~~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1428)
.+......+ +.+++||++.+.++.+|.|+.+++.++.+.+.+|+..+...+..+.++.++.+|+.+.++.|..++...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 555444444 346889999999999999999999999999999999999999999999999999999998875433111
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC
Q 000553 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1428)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~ 663 (1428)
... ......+.|+++|++|+|..+++ + +|+|+||+|++||.++|||+||||||||+|+|+|.++|
T Consensus 461 ~~~-----------~~~~~~g~I~~~nvsf~y~~~~~-~---vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p 525 (709)
T COG2274 461 TLI-----------HLPKLQGEIEFENVSFRYGPDDP-P---VLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP 525 (709)
T ss_pred ccc-----------cccccCceEEEEEEEEEeCCCCc-c---hhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 000 01245678999999999987532 3 49999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCCh-HHHHHHHHHhcchHHHhcccCCCcccccC
Q 000553 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDP-QSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1428)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~-~~~~~v~~~c~l~~di~~l~~gd~t~ig~ 729 (1428)
++|+|.++| +|+||+|++.+|+|||+|||.++.+... |+..++++..+.+++|..+|.|++|.+||
T Consensus 526 ~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 526 QQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred CCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccccc
Confidence 999999987 5999999999999999999999988644 78888888889999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCC
Q 000553 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1428)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 809 (1428)
+|.+||||||||++||||++++|+|+||||||||||+++++.|.+++ .. ...++|+|+||||++.+..||+|+||++|
T Consensus 606 ~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 606 GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999984 33 56789999999999999999999999999
Q ss_pred eEEEecChHHHHhccccCcc
Q 000553 810 QVKWIGSSADLAVSLYSGFW 829 (1428)
Q Consensus 810 ~i~~~g~~~el~~~~~~~~~ 829 (1428)
+|+++|+++|+++..+.+.+
T Consensus 684 kiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 684 KIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred ceeccCCHHHHHHhcChHHH
Confidence 99999999999987665543
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.2e-70 Score=694.42 Aligned_cols=517 Identities=25% Similarity=0.381 Sum_probs=433.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 985 (1428)
++.++..++..+.+++++...+.............+..+++++.++..++.+++.++....+.+....+++.+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455555555566666655543211111111223344566677777888888888999999999999999999999999
Q ss_pred CccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++.+.+|+++++++.+.++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888888888777766666666666666665666
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ--------------- 1130 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~--------------- 1130 (1428)
..+......+...+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677788899999999999999999999999999998888877766554433332221111
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1131 ------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1131 ------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
+..++.++..+...+..+...+.++.....+.+|+.++++.+++...... +. -+..+.|+++||+
T Consensus 261 ~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~~~v~ 337 (571)
T TIGR02203 261 FQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEFRNVT 337 (571)
T ss_pred HHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEEEEEE
Confidence 12223445566677778888899999999999999999987665422111 11 1245789999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|++..+++|+|+||+|+|||+|+|+|+||||||||+++|+|+++|++|+|++||+|+++++.+++|++++||||||++
T Consensus 338 f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~l 417 (571)
T TIGR02203 338 FRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVL 417 (571)
T ss_pred EEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCccc
Confidence 99986556899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000553 1279 FEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1354 (1428)
Q Consensus 1279 f~gTIR~NLdp~~--~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaT 1354 (1428)
|+|||||||..++ +.+|++++++++++++++++.++ ||||.++|+|.+||||||||+|||||++++|+|++|||||
T Consensus 418 f~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpt 497 (571)
T TIGR02203 418 FNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEAT 497 (571)
T ss_pred ccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 9999999998875 57899999999999999999998 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1355 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1355 S~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
|+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++++++ +.|+++++.+
T Consensus 498 s~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~~~~ 568 (571)
T TIGR02203 498 SALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN-GLYAQLHNMQ 568 (571)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC-CHHHHHHHHh
Confidence 9999999999999999988999999999999999999999999999999999999999864 6899988753
No 24
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-70 Score=634.91 Aligned_cols=471 Identities=23% Similarity=0.363 Sum_probs=398.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHH
Q 000553 949 CMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLL 1028 (1428)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l 1028 (1428)
++...+..++--+.......+.-.+++.++|+++...+..-..+-..|+++||+..|++.+|+..-..+...+..++..+
T Consensus 68 aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~ 147 (573)
T COG4987 68 AILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIA 147 (573)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHH
Confidence 34444444444455566777888899999999999999889999999999999999999999999999999998888888
Q ss_pred HHhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHH
Q 000553 1029 GIAVVLSYVQVFFLLLLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEH 1107 (1428)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~ 1107 (1428)
++.+.+++.+|++++.+... ++....+...+.+..|...+--...+..++++|.|.+.|....+.||.++.|.+.+.+.
T Consensus 148 ~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~ 227 (573)
T COG4987 148 VVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEAT 227 (573)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHH
Confidence 88888888887766544333 33334444455555666666666778899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-------------------------HHHHHHHHHHHH-HHHHHHHHHH
Q 000553 1108 VVLYQRTSYSELTASLWLSLRLQ--VGLALSY-------------------------AAPIVSLLGNFL-SSFTETEKEM 1159 (1428)
Q Consensus 1108 ~~~~~~~~~~~~~~~~wl~~~l~--~gl~l~~-------------------------~~~~~~~l~~~i-~~~~~~e~~~ 1159 (1428)
.+...+.......+..|-...+. .|+.+.+ ++.....+.-+. ..+.++....
T Consensus 228 e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~ 307 (573)
T COG4987 228 EASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVI 307 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHH
Confidence 88888888887777777665554 1222111 111122222233 4456777788
Q ss_pred HHHHHHHhhhcCCccccccCCCCCCCCCCCc-cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHH
Q 000553 1160 VSLERVLEYMDVPQEELCGYQSLSPDWPFQG-LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNA 1238 (1428)
Q Consensus 1160 ~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g-~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~ 1238 (1428)
.|..|+.+..+.++|...+.. .-|..+ .++++||+|+|+++.+++|+|+||++++||||||+|||||||||++++
T Consensus 308 ~Sa~Rl~~i~~q~~e~~~~~~----~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqL 383 (573)
T COG4987 308 ASARRLNDILDQKPEVTFPDE----QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQL 383 (573)
T ss_pred HHHHHHhhhccCCcccCCCcc----ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHH
Confidence 899999999888776532211 112222 799999999999888899999999999999999999999999999999
Q ss_pred HhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--C
Q 000553 1239 LFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--G 1315 (1428)
Q Consensus 1239 L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--g 1315 (1428)
|.|.++|++|+|.++|.+++.++.+++|+.|++++|.+++|+||+|+||...+ ..||||+|++++++||.+++++. |
T Consensus 384 l~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~g 463 (573)
T COG4987 384 LAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDG 463 (573)
T ss_pred HHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhh
Confidence 99999999999999999999999999999999999999999999999997765 36999999999999999999999 9
Q ss_pred CchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEE
Q 000553 1316 LETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEIL 1395 (1428)
Q Consensus 1316 Ldt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~ 1395 (1428)
|+|.+||+|.+||||||||++|||+||++.+++||||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..||||+
T Consensus 464 l~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIi 543 (573)
T COG4987 464 LNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRII 543 (573)
T ss_pred hhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000553 1396 ILDHGHLVEQGNPQTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1396 Vl~~G~ive~g~p~eLl~~~~s~f~~l~~ 1424 (1428)
|||+|+++|+|+|.+|+++ +|.|++|++
T Consensus 544 vl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 544 VLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred EEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 9999999999999999995 579999976
No 25
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.2e-70 Score=652.92 Aligned_cols=535 Identities=20% Similarity=0.234 Sum_probs=437.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1428)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 350 (1428)
.+.+..||.+..+.++.++.......-|.++.+++|.+.. .+....-.-....+..++++.+++...+.+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677888888888999999999999999999999876 333222223455666777888888888888888889999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHH
Q 000553 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAIT 428 (1428)
Q Consensus 351 r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~w~~p~~i~i~~-~lL~~~lg~a~l~g~~v~ 428 (1428)
-..+...+|++.++...+.+++..+|++++.++.|++.+.+.+ .++.+..-+.++...++ +|++..+-++.+. ++++
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~-~i~~ 298 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVT-LIVV 298 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHH-HHHh
Confidence 9999999999999999999999999999999999999998855 45666555666654443 3444444444332 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1428)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1428)
.+.+.+..+++++.++..++..++..+-.+...|.|++||+||+|+-|+...++..+.=++-++..+|......+....+
T Consensus 299 P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~ 378 (716)
T KOG0058|consen 299 PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGST 378 (716)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHH
Confidence 33344556777777788888888888888999999999999999999988777776654444444444443333332222
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000553 509 ATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1428)
Q Consensus 509 ~~~--~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1428)
... ...++++.+|.|++.++.||++...+++.+-..+..++..+...++.++++..+-+|+.+|++.++.-+... .
T Consensus 379 ~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G--~ 456 (716)
T KOG0058|consen 379 NLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTG--T 456 (716)
T ss_pred HHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCC--c
Confidence 222 234567788999999999999999999999999999999999999999999999999999997654322110 0
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCe
Q 000553 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1428)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G 666 (1428)
..| ....+.|+|+|++|+||.+++. ++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|
T Consensus 457 ~~p----------~~~~G~IeF~~VsFaYP~Rp~~---~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 457 LAP----------DHLQGVIEFEDVSFAYPTRPDV---PVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccc----------ccccceEEEEEeeeecCCCCCc---hhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 011 1345789999999999987554 459999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
+|.+|| +||+|.|+|.||++||+|||.+|.+ .++++..++.+.+.-++.|..+|+|++|.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 999998 5999999999999999999999976 56788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
.|||||||||||||||++||.||||||+|||||++.+.. .+.++.. ..+++|||+|+||++.+++||+|+++++|+++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~l-Vq~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYL-VQEALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHH-HHHHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 999999999999999999999999999999999997654 4444544 67789999999999999999999999999999
Q ss_pred EecChHHHHhcc
Q 000553 813 WIGSSADLAVSL 824 (1428)
Q Consensus 813 ~~g~~~el~~~~ 824 (1428)
|.|+|+|+++..
T Consensus 682 E~G~h~eLl~~~ 693 (716)
T KOG0058|consen 682 EMGTHDELLSKP 693 (716)
T ss_pred ecccHHHHhhCc
Confidence 999999999876
No 26
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-72 Score=630.05 Aligned_cols=467 Identities=25% Similarity=0.444 Sum_probs=389.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 000553 952 NSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIA 1031 (1428)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~ 1031 (1428)
++++..+|+|+......-..+.+--.+++++....++|.-...+|+.+.-+.+..+.+. .+.....+..-.+.-+...+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 35667778888888888899999999999999999999999999999888877766665 22222222222222222222
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHH
Q 000553 1032 VV-LSYVQVFFLLLLVPFWFIYSKLQ----FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1106 (1428)
Q Consensus 1032 ~~-~~~~~~~~~~~~~p~~~~~~~i~----~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1106 (1428)
+. .....+|+.+++...+..|..+. ..--+..|.+...+.+++ +.-.+++-+.+|+|-|+.|++..++|.+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYre 426 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYRE 426 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHH
Confidence 22 22346777776666655554322 222223333333333333 4557899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1107 HVVLYQRTSYSELTASLWLSLRLQ------------------------V---GLALSYAAPIVSLLGNFLSSFTETEKEM 1159 (1428)
Q Consensus 1107 ~~~~~~~~~~~~~~~~~wl~~~l~------------------------~---gl~l~~~~~~~~~l~~~i~~~~~~e~~~ 1159 (1428)
.++.+|+..++....-..+..... + .+..+|.+++...++++-..+..++++.
T Consensus 427 Ail~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nf 506 (790)
T KOG0056|consen 427 AILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNF 506 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 999999988776544333332211 2 2567899999999999999999999999
Q ss_pred HHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHH
Q 000553 1160 VSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNAL 1239 (1428)
Q Consensus 1160 ~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L 1239 (1428)
.-+|++.+.++.++|-.+.+..+|-. -.+|.|+|+||+|.|.++ +|||+||||+++||+.||+|||||+||||++++|
T Consensus 507 iDmEnmfdllkee~eVvd~P~a~pl~-~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTimRlL 584 (790)
T KOG0056|consen 507 IDMENMFDLLKEEPEVVDLPGAPPLK-VTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLL 584 (790)
T ss_pred hhHHHHHHHhhcCchhhcCCCCCCcc-ccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHHHHHH
Confidence 99999999998877754333333322 257999999999999876 5799999999999999999999999999999999
Q ss_pred hcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CC
Q 000553 1240 FRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GL 1316 (1428)
Q Consensus 1240 ~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gL 1316 (1428)
+|+++.++|+|+|||+||+++..+.||++||+||||.+||++||..||.+.. ..+|||+.+|.+.++++|.|-++ |+
T Consensus 585 fRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY 664 (790)
T KOG0056|consen 585 FRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGY 664 (790)
T ss_pred HHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhh
Confidence 9999999999999999999999999999999999999999999999998875 46899999999999999999998 99
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEE
Q 000553 1317 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILI 1396 (1428)
Q Consensus 1317 dt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~V 1396 (1428)
+|+|||+|-.||||||||+++||++||+|.|++||||||+||..||+.||.++.+.++++|.|+|||||+||.++|.|+|
T Consensus 665 ~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 665 NTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1397 LDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1397 l~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
+++|+|+|.|+|+||+++++|.|++||+.
T Consensus 745 i~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 99999999999999999999999999953
No 27
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-70 Score=643.15 Aligned_cols=482 Identities=24% Similarity=0.377 Sum_probs=401.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHH
Q 000553 938 TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFIL 1017 (1428)
Q Consensus 938 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l 1017 (1428)
...+++.++++.++..++...+......++.++...+++.+++++.+.+..+-...|+|++....+..++.++..+...+
T Consensus 39 l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 39 LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777788888888888888899999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHH---HHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHhhcchhHHHHHHhhcchHHHH
Q 000553 1018 NILLANFVGLLGIAVVLSYVQVF---FLLLLVPFWFIYSKL-QFFYR-STSRELRRLDSVSRSPIYASFTETLNGSSTIR 1092 (1428)
Q Consensus 1018 ~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~p~~~~~~~i-~~~y~-~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIr 1092 (1428)
...+.+.+..+.+++.+++.+|. ++++..|++.++..+ ...-. ...++. .+...+.+||.+.++|+.|+|
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~-----~~~~~ls~~FLD~LrGL~TLr 193 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQF-----SALARLSGHFLDRLRGLETLR 193 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHHHHHHHhcChHHHH
Confidence 88888887777777777766654 445556666655433 22221 222222 333457789999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH-------HH-----------------HHHHHH
Q 000553 1093 AFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ----VGLALS-------YA-----------------APIVSL 1144 (1428)
Q Consensus 1093 af~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~----~gl~l~-------~~-----------------~~~~~~ 1144 (1428)
+||..++..++..+.-++..+..+....++.--+..++ .|.++. |. --+..+
T Consensus 194 ~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~P 273 (559)
T COG4988 194 AFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQP 273 (559)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999888877766665555555 111111 11 111223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEE
Q 000553 1145 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGI 1224 (1428)
Q Consensus 1145 l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgI 1224 (1428)
+..+-..|........+.+.+..+.+.|.+...........|..+.+++.+|++++|+++. ++++|+||+++|||++||
T Consensus 274 lR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~tal 352 (559)
T COG4988 274 LRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTAL 352 (559)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEE
Confidence 3344455666667778899999999887765332222233344455677779999998664 899999999999999999
Q ss_pred ECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHH
Q 000553 1225 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLE 1303 (1428)
Q Consensus 1225 vGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~ 1303 (1428)
||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+.+|+++++|||+|++|+|||||||.+++. .+|++|+++++
T Consensus 353 vG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~ 432 (559)
T COG4988 353 VGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALD 432 (559)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998876 68999999999
Q ss_pred HccHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEec
Q 000553 1304 KCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIA 1382 (1428)
Q Consensus 1304 ~~~l~~~i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~Ia 1382 (1428)
++++.++++. .||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||+||
T Consensus 433 ~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~it 512 (559)
T COG4988 433 QAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVIT 512 (559)
T ss_pred HhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEE
Confidence 9999999986 499999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1383 HRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1383 Hrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
||++.+.++|+|+|||+|+++|.|+|++|.+++ |.|+.|++++
T Consensus 513 Hrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~-~~y~~l~~~q 555 (559)
T COG4988 513 HRLEDAADADRIVVLDNGRLVEQGTHEELSEKQ-GLYANLLKQQ 555 (559)
T ss_pred cChHHHhcCCEEEEecCCceeccCCHHHHhhcC-cHHHHHHHHH
Confidence 999999999999999999999999999999865 6999999864
No 28
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-69 Score=701.70 Aligned_cols=515 Identities=23% Similarity=0.345 Sum_probs=410.6
Q ss_pred HHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000553 908 AILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 987 (1428)
Q Consensus 908 ~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 987 (1428)
.++..+.....++.++...|..-..........+...++++.++..++.+++.++....+.+...+++.++++++++.|+
T Consensus 148 s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 227 (694)
T TIGR01846 148 SLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPL 227 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 33444444555666666555321111111122233445556666778888889999999999999999999999999999
Q ss_pred cccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 988 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1067 (1428)
Q Consensus 988 ~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~ 1067 (1428)
.||++.++|++++|+ +|++.+.+.+...+..++..++.++..++++++.+|.++++++..++++..+.....+..+...
T Consensus 228 ~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~ 306 (694)
T TIGR01846 228 GYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRV 306 (694)
T ss_pred HHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 6999999888776666665555555556666777776665544333333332222222222222
Q ss_pred HHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHH
Q 000553 1068 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW------------------LSLRL 1129 (1428)
Q Consensus 1068 rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w------------------l~~~l 1129 (1428)
+...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+ ++..+
T Consensus 307 ~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~l 386 (694)
T TIGR01846 307 EDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHL 386 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 223344556779999999999999999999999999988887776665543322222 21111
Q ss_pred H------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEE
Q 000553 1130 Q------VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMR 1200 (1428)
Q Consensus 1130 ~------~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~ 1200 (1428)
- +| ....+...+...+..+...+.+++....+.+|+.++++.|+|...... ....+..|.|+|+||+|+
T Consensus 387 v~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~~~~~~~~~i~~~~vsf~ 464 (694)
T TIGR01846 387 VIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGL--AALPELRGAITFENIRFR 464 (694)
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC--CCCCCCCCeEEEEEEEEE
Confidence 0 22 223344456667788888999999999999999999988776432111 111123578999999999
Q ss_pred ECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccC
Q 000553 1201 YKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE 1280 (1428)
Q Consensus 1201 Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~ 1280 (1428)
|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+|+++++.+++|+++++|||||.+|+
T Consensus 465 y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~ 544 (694)
T TIGR01846 465 YAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFS 544 (694)
T ss_pred cCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehh
Confidence 98766779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCC
Q 000553 1281 GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1357 (1428)
Q Consensus 1281 gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~l 1357 (1428)
|||||||..++ ..+|++++++++.++++++++.+ |+||.++++|.+||||||||++||||++++|+|||||||||+|
T Consensus 545 ~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~L 624 (694)
T TIGR01846 545 RSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSAL 624 (694)
T ss_pred hhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCC
Confidence 99999998765 47899999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1358 DAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1358 D~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
|++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++..
T Consensus 625 D~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 625 DYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL-QGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc-CChHHHHHHhh
Confidence 999999999999998889999999999999999999999999999999999999986 47999999753
No 29
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.1e-69 Score=687.50 Aligned_cols=533 Identities=19% Similarity=0.188 Sum_probs=418.9
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 270 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 270 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
++...+.+++.++...++.++..++..++|++++.++|.+.. +.+....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888888999999999999999999999997642 2222223334555666677777888788888889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHhHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 424 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~---lL~~~lg~a~l~g 424 (1428)
++...+...+|+|.++++...+.+.++|+++|.+++|++++.+... .+..++...+.+++++. .+.+.+++.+++.
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 172 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGT 172 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999998654 45555555444443333 2333344433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000553 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYL 500 (1428)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~ 500 (1428)
+++...+..++.++.++..++.++..++..+.+.|.++|+++||.+++|+.+.+++.+ .|+.+.+..+.....
T Consensus 173 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 173 ---APLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233334456778888888999999999999999999999999999999988877744 444444443333223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 501 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDA---------AMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 571 (1428)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~f~~y~~~~~~Lt~---------~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~ 571 (1428)
......+... +. +.++.++.+.+. +.++. ..+|.++.+...+..|+..++..+..+.++.++.+||.+
T Consensus 250 ~~~~~~~~~~-~~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-SI-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222222211 11 122233333333 33443 445666677788899999999999999999999999999
Q ss_pred hhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHH
Q 000553 572 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 651 (1428)
Q Consensus 572 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKS 651 (1428)
+++.++.++.... ...+ ......|+++|++|.|+++ + ++|+|+||++++|+.++||||||||||
T Consensus 327 ~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~--~---~vL~~i~l~i~~G~~vaIvG~SGsGKS 390 (588)
T PRK11174 327 FLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG--K---TLAGPLNFTLPAGQRIALVGPSGAGKT 390 (588)
T ss_pred HHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC--C---eeeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 9976643211000 0000 0123469999999987642 2 359999999999999999999999999
Q ss_pred HHHHHHHcCccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHh
Q 000553 652 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 717 (1428)
Q Consensus 652 tll~~llG~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~ 717 (1428)
||+++|+|++ |++|+|.++| +|+||||+||+|++||||||.+|++ .+++++.++++.|+++++++
T Consensus 391 TL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~ 469 (588)
T PRK11174 391 SLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLP 469 (588)
T ss_pred HHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHH
Confidence 9999999999 8999999987 5999999999999999999999964 89999999999999999999
Q ss_pred cccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh
Q 000553 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1428)
Q Consensus 718 ~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 797 (1428)
.+|+|++|.+||+|.+|||||||||+||||++++|+|+||||||||||++++++|.+. +.. +.+++|+|+|||+++.+
T Consensus 470 ~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~i 547 (588)
T PRK11174 470 LLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLEDL 547 (588)
T ss_pred hcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 444 55789999999999999
Q ss_pred hcCCEEEEEeCCeEEEecChHHHHhccccC
Q 000553 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSG 827 (1428)
Q Consensus 798 ~~ad~i~~l~~G~i~~~g~~~el~~~~~~~ 827 (1428)
..||+|++|++|+++++|+++|++++.+.+
T Consensus 548 ~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y 577 (588)
T PRK11174 548 AQWDQIWVMQDGQIVQQGDYAELSQAGGLF 577 (588)
T ss_pred HhCCEEEEEeCCeEeecCCHHHHHhcchHH
Confidence 999999999999999999999998765543
No 30
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.6e-68 Score=676.78 Aligned_cols=518 Identities=24% Similarity=0.336 Sum_probs=406.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000553 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1428)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 983 (1428)
+++..++..++....++++....|.... ......++.+++++.++..+..++......+...+....+..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555666667777766653221 1111222233333333333333333444444555555566679999999
Q ss_pred CCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1063 (1428)
Q Consensus 984 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~s 1063 (1428)
+.|..+|++.+.|++++|+++|++.+...+...+...+..++..++.++++.+.+|+++++++.+++++..+...+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877766666666666666666666677777776666555555555666666666
Q ss_pred HHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------
Q 000553 1064 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL------------------ 1125 (1428)
Q Consensus 1064 r~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl------------------ 1125 (1428)
++..+......+.+.+++.|+++|+.+||+||.++.+.+++.+..+...+..........+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677888899999999999999999999998888887777665543322211111
Q ss_pred HHHH------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEE
Q 000553 1126 SLRL------QVG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQN 1196 (1428)
Q Consensus 1126 ~~~l------~~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~n 1196 (1428)
+..+ .+| .++.++..+...+..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|+|+|
T Consensus 261 g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I~~~~ 339 (588)
T PRK13657 261 GAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAVEFDD 339 (588)
T ss_pred HHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeEEEEE
Confidence 1110 022 2234455566677778888888888999999999998765442211111111 12346899999
Q ss_pred EEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc
Q 000553 1197 VTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP 1276 (1428)
Q Consensus 1197 vs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp 1276 (1428)
|+|+|+++ +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||||
T Consensus 340 vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~ 418 (588)
T PRK13657 340 VSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDA 418 (588)
T ss_pred EEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCc
Confidence 99999743 56999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000553 1277 FLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1353 (1428)
Q Consensus 1277 ~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEa 1353 (1428)
.+|+|||||||..++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+|||||||
T Consensus 419 ~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEp 498 (588)
T PRK13657 419 GLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEA 498 (588)
T ss_pred ccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 999999999998774 46899999999999999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1354 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1354 TS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
||+||++|++.|.+.|++..+++|+|+||||++.+..||||++|++|+++|.|+|++|+++ ++.|++|+++.+
T Consensus 499 ts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 499 TSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred ccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 9999999999999999988789999999999999999999999999999999999999986 579999987653
No 31
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-68 Score=679.18 Aligned_cols=519 Identities=24% Similarity=0.386 Sum_probs=411.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000553 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1428)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 986 (1428)
+.++..+.....++.+....+..-..........++.+++++.++..++.+++.++....+.+....++..+++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~ 105 (576)
T TIGR02204 26 ALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLS 105 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34445555555555555544431101111111223334444455556667777788888899999999999999999999
Q ss_pred ccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1428)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l 1066 (1428)
.++|+....|++++|+++|++.+++.....+..++..++.+++.++++++..|++.++++...+++..+...+.+..+..
T Consensus 106 ~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~ 185 (576)
T TIGR02204 106 PSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKL 185 (576)
T ss_pred HHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888877777777777777777777665544333333333333333333444
Q ss_pred HHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
Q 000553 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL----------------- 1129 (1428)
Q Consensus 1067 ~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l----------------- 1129 (1428)
.+.....+....+++.|.++|+++||+|+.++++.+++.+..+...+..........|+....
T Consensus 186 ~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 265 (576)
T TIGR02204 186 SRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAH 265 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455666778999999999999999999999988888877765554433222211111110
Q ss_pred -------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEE
Q 000553 1130 -------QVG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTM 1199 (1428)
Q Consensus 1130 -------~~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~ 1199 (1428)
.+| ....+...+...+..+...+.++.....+.+|+.++++.++|........+..+|..+.|+|+||+|
T Consensus 266 ~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f 345 (576)
T TIGR02204 266 DVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNF 345 (576)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEE
Confidence 011 2233445566777888899999999999999999998876542211111112234557899999999
Q ss_pred EECCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1200 RYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1200 ~Y~~~~-~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+||||++
T Consensus 346 ~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~l 425 (576)
T TIGR02204 346 AYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVL 425 (576)
T ss_pred ECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCcc
Confidence 997543 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1279 FEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1279 f~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
|+|||||||.+++ ..+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+|||||||||
T Consensus 426 f~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts 505 (576)
T TIGR02204 426 FAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATS 505 (576)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCccc
Confidence 9999999999865 45789999999999999999998 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1356 NVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
+||.+|++.+.+.+++..+++|+|+||||++.+..||||++|++|+++|.|+|++|+++ ++.|++|++.+
T Consensus 506 ~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 506 ALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYARLARLQ 575 (576)
T ss_pred ccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHHHHhhc
Confidence 99999999999999998889999999999999999999999999999999999999885 57999998753
No 32
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.4e-68 Score=671.08 Aligned_cols=476 Identities=20% Similarity=0.263 Sum_probs=375.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVV--LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 983 (1428)
++.++..++....++.+++.++..... ......+..+ ++++.++..++.++..++....+.+...+++.+++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~id~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 20 LLGALALGSAVALLGVSAWLISRAAEM--PPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334445555555566666555532111 1111111111 122344556666777777788888999999999999999
Q ss_pred CCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000553 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRST 1062 (1428)
Q Consensus 984 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~-~~i~~~y~~~ 1062 (1428)
+.|.+||++.++|++++|+++|++.+++.+...+..++..++.+++.++++++.+|.++++++..+.++ .....++.+.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 177 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRA 177 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888888888888888888888888887766554433322 2233344444
Q ss_pred HHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------H
Q 000553 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL------------------W 1124 (1428)
Q Consensus 1063 sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~------------------w 1124 (1428)
.+...+......+.+.+++.|+++|+++||+|++|+.+.+++.+..++..+.......... |
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455667888999999999999999999999999998888777666544322211 1
Q ss_pred HHHHH------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCC-CCCCCCCCCccEEE
Q 000553 1125 LSLRL------QVG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQGLIEF 1194 (1428)
Q Consensus 1125 l~~~l------~~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~-~~~~~wp~~g~I~f 1194 (1428)
++..+ .+| ..+.++..+...+..+...+.++.....+.+|+.++++.++|...... .+...+|..+.|+|
T Consensus 258 ~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~ 337 (529)
T TIGR02868 258 AGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLEL 337 (529)
T ss_pred HHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEE
Confidence 11110 012 222344455566777777888899999999999999987765322111 11123445678999
Q ss_pred EEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeC
Q 000553 1195 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1274 (1428)
Q Consensus 1195 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1274 (1428)
+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|++++ .+++|++++||||
T Consensus 338 ~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q 415 (529)
T TIGR02868 338 RDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQ 415 (529)
T ss_pred EEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEcc
Confidence 9999999754 4699999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1275 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1275 dp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
||++|+|||||||.+++ +.+|+++++|++.++++++++++ |+||.+||+|.+||||||||+|||||++++|+|||||
T Consensus 416 ~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLD 495 (529)
T TIGR02868 416 DAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLD 495 (529)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999875 46899999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRI 1385 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl 1385 (1428)
||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 496 E~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 496 EPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999988999999999996
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-68 Score=614.73 Aligned_cols=477 Identities=23% Similarity=0.366 Sum_probs=370.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHH
Q 000553 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1428)
Q Consensus 940 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1019 (1428)
.-+..|++..+...++..++.+.+.+...++-+....+.+++.++..+++|....+|.+-+...+....|...+...+..
T Consensus 75 ~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~ 154 (591)
T KOG0057|consen 75 ALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFN 154 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999999999998888887777777666665555
Q ss_pred HHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhc
Q 000553 1020 LLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKL----QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1094 (1428)
Q Consensus 1020 ~~~~~~~~l~~~~~~~~-~~~~~~~~~~p~~~~~~~i----~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf 1094 (1428)
++..++.+......+.+ ..+.++++.+.....|..+ ..+--+-.+++. .+....-....|++.+-.+||+|
T Consensus 155 i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N----~Adn~as~~~~dsL~Nye~VKsf 230 (591)
T KOG0057|consen 155 IIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMN----NADNSASRRAYDSLINYEIVKSF 230 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHH----hhhhHHHHHHHHHHhhHHHHHHc
Confidence 55554444333322222 2333333333333333221 111111222222 23333345678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH-----------------------HHHHHHHHHHHHHH
Q 000553 1095 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQ----VGL-----------------------ALSYAAPIVSLLGN 1147 (1428)
Q Consensus 1095 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~----~gl-----------------------~l~~~~~~~~~l~~ 1147 (1428)
+.|++..+++...+..+.+......+....+.+-.. +.+ ..+...++...++.
T Consensus 231 NnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~ 310 (591)
T KOG0057|consen 231 NNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNF 310 (591)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHH
Confidence 999999999999998887776554333222222111 111 11122233333344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECC
Q 000553 1148 FLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGR 1227 (1428)
Q Consensus 1148 ~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGr 1227 (1428)
+-..+.++-.++.-.+-.....+ .+...... +.+.-+.+|.|+|+||+|.|+++ +++|+|+||+|++||||||||+
T Consensus 311 Lg~vyr~~~q~l~Dm~~~~~l~~--~~~~i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~ 386 (591)
T KOG0057|consen 311 LGSVYRELRQALTDMRTLFILLE--VDEDIQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGS 386 (591)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhh--hhhhhhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECC
Confidence 44444444444443333332211 11111111 22223456789999999999865 5699999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHcc
Q 000553 1228 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCH 1306 (1428)
Q Consensus 1228 TGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~ 1306 (1428)
|||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.+++++++
T Consensus 387 nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 387 NGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG 465 (591)
T ss_pred CCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC
Confidence 99999999999999999 99999999999999999999999999999999999999999998875 68999999999999
Q ss_pred HHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000553 1307 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1384 (1428)
Q Consensus 1307 l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHr 1384 (1428)
++|.+.++ |++|.+||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|++...++|+|+|+||
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~ 545 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHR 545 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999 9999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred hhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1385 ISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1385 l~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
++++++||+|++||+|+|+|.|+|+||++ +++.|+++|..+
T Consensus 546 l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 546 LDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred chhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 99999999999999999999999999999 778999988653
No 34
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.6e-69 Score=639.01 Aligned_cols=475 Identities=25% Similarity=0.365 Sum_probs=359.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCC----CeEEEEcC--------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~----~G~i~~~~-------- 672 (1428)
.++++|.+..+.... .+ ..+++||||++.+||.++|||.|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~-~~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDG-GR-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCC-cc-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 678999998887652 22 45799999999999999999999999999999999999887 89998765
Q ss_pred ---------cEEEEcCCCC-CCcc--cHHHHHhc----CCCC-C---hHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 673 ---------SIAYVPQVPW-ILSG--TIRDNILF----GKNY-D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 673 ---------~i~y~~Q~p~-l~~~--ti~~nI~~----g~~~-~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
.|||++|+|+ .+|. ||.+-|.- .... . .++..+.++..+|.+.... +....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 4999999996 4554 77766642 2222 1 2233344455555433221 45677
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 811 (1428)
.|||||||||.||+||..+|++||+||||+|||+.++..|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999987332223457799999999999876 999999999999
Q ss_pred EEecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHH
Q 000553 812 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 891 (1428)
Q Consensus 812 ~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 891 (1428)
+|.|+.+++.++...-+. . .+
T Consensus 234 VE~G~~~~i~~~p~hpYT------~-----------------------------------~L------------------ 254 (539)
T COG1123 234 VETGPTEEILSNPQHPYT------R-----------------------------------GL------------------ 254 (539)
T ss_pred EEecCHHHHHhccCCccc------H-----------------------------------HH------------------
Confidence 999999998653211000 0 00
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 892 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 971 (1428)
Q Consensus 892 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 971 (1428)
|.. .+...
T Consensus 255 ---------------------------------l~a-----~p~~~---------------------------------- 262 (539)
T COG1123 255 ---------------------------------LAA-----VPRLG---------------------------------- 262 (539)
T ss_pred ---------------------------------Hhh-----CCCcc----------------------------------
Confidence 000 00000
Q ss_pred HHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000553 972 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1051 (1428)
Q Consensus 972 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~ 1051 (1428)
T Consensus 263 -------------------------------------------------------------------------------- 262 (539)
T COG1123 263 -------------------------------------------------------------------------------- 262 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1052 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQV 1131 (1428)
Q Consensus 1052 ~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~ 1131 (1428)
T Consensus 263 -------------------------------------------------------------------------------- 262 (539)
T COG1123 263 -------------------------------------------------------------------------------- 262 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCC-------
Q 000553 1132 GLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS------- 1204 (1428)
Q Consensus 1132 gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~------- 1204 (1428)
.+.... ......-+....++++|++++|...
T Consensus 263 -----------------------------------------~~~~~~-~~~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~ 300 (539)
T COG1123 263 -----------------------------------------DEKIIR-LPRRGPLRAEPLLSVRNLSKRYGSRKGLFVRE 300 (539)
T ss_pred -----------------------------------------cccccc-cccccccccCceeEeeeeeeeecccccccccc
Confidence 000000 0000000023468999999999741
Q ss_pred --CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCee--CCCCChHhHhcceEEEeCCccc--
Q 000553 1205 --LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN--IINTPVRDLRGRFAVVPQSPFL-- 1278 (1428)
Q Consensus 1205 --~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~d--i~~i~~~~lR~~i~~VpQdp~l-- 1278 (1428)
...+++||||++++||.+||||.||||||||.++|+|+++|++|+|.++|.| .+.-....+|+++-+|.|||+-
T Consensus 301 ~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SL 380 (539)
T COG1123 301 RGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSL 380 (539)
T ss_pred ccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCccccc
Confidence 2468999999999999999999999999999999999999999999999977 3333456688899999999973
Q ss_pred c-CCcHHHhcC-cCCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1279 F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1279 f-~gTIR~NLd-p~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
- ..||+++|. |...+.... .+-.+..+.+.++..||.. .++.....||||||||+||||||..+|++||+|||||
T Consensus 381 nPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~S 458 (539)
T COG1123 381 NPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVS 458 (539)
T ss_pred CccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCcc
Confidence 3 359999984 322111100 1111112333344446665 4667778899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1356 NVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
+||+-+.+.|.+.|.+.-+ +.|.|+|+|++..++. ||||+||++|+|||.|+.+++.+++.-.|.+...+
T Consensus 459 aLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 459 ALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred ccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 9999999999999877543 7999999999999997 89999999999999999999999887777776544
No 35
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.6e-67 Score=675.58 Aligned_cols=537 Identities=21% Similarity=0.262 Sum_probs=441.9
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1428)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1428)
.+++..++.+++.++...+..++..++.++.|++++.++|.+-........+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455466778888888899999999999999999999998764333334445566666677777888888888899999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000553 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1428)
Q Consensus 348 ~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~ 425 (1428)
.++...+...+|+|.++++...+.+.+.|++++.++ |++.+.+.... +..+...++-+ +++++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFAL-LNLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888889999999987 78888875432 23333444433 333333333344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1428)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1428)
+++++.+.+..++.+.+.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556677788888899999999999999999999999999999999999988888776666666555555554444
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000553 506 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1428)
Q Consensus 506 ~~~~~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1428)
.+......+ +.++.+|+|.+.++.+|.+.++++.+++..+..|+..++..+..+.++.++++|+.++++.++..+...
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 442 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc
Confidence 433333222 234566778888889999999999999999999999999999999999999999999997654221100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC
Q 000553 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1428)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~ 663 (1428)
..+ ......|+++|++|+|++++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 443 ---~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 443 ---TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred ---CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 000 11235799999999997432 2359999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCC
Q 000553 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1428)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~ 730 (1428)
++|+|.++| +||||+|+|++|++||+|||.+|++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988899999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
|.+|||||||||+||||++++|+|++||||||+||+++++++.+. +.. . ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988 433 2 589999999999999999999999999
Q ss_pred EEEecChHHHHhccccC
Q 000553 811 VKWIGSSADLAVSLYSG 827 (1428)
Q Consensus 811 i~~~g~~~el~~~~~~~ 827 (1428)
|+++|+++|+.+..+.+
T Consensus 662 iv~~G~~~~Ll~~~~~y 678 (686)
T TIGR03797 662 VVQQGTYDELMAREGLF 678 (686)
T ss_pred EEEECCHHHHHhCCcHH
Confidence 99999999998765443
No 36
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1e-66 Score=677.37 Aligned_cols=543 Identities=20% Similarity=0.206 Sum_probs=444.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1428)
Q Consensus 271 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 350 (1428)
+..++.+++.++..++..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKL 225 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777888888999999999999999999998764333333445556666667777888888888899999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000553 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1428)
Q Consensus 351 r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~ 429 (1428)
...+...+|+|.++++...+.+.++|+++|.++.| +.+.++.. .+..+....+.+++.+.+++..-++.+++.++.++
T Consensus 226 ~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 304 (710)
T TIGR03796 226 AVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAA 304 (710)
T ss_pred HHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888999999999888 56776543 34444444455444444444444444444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1428)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1428)
+.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++.+.++.+...+......+...+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (710)
T TIGR03796 305 INVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPT 384 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777888888888999999999999999999999999999999999999999888888877766665555444333
Q ss_pred HHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000553 510 TTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1428)
Q Consensus 510 ~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1428)
....+ +.++++|+|.+.++.+|.+.++++.++++.+..|+..++..+..+.++.++++|+.++++.++..+..... .
T Consensus 385 ~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~-~ 463 (710)
T TIGR03796 385 LLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE-A 463 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-c
Confidence 32222 34567788888889999999999999999999999999999999999999999999999765432211000 0
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeE
Q 000553 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1428)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~ 667 (1428)
.... ..........|+++|++|+|+..+ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+
T Consensus 464 ~~~~----~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 464 PAAG----SEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred cccc----cccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 0000 000011235799999999997532 23599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCcccHHHHHhcCC-CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCc
Q 000553 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1428)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~ 733 (1428)
|.++| .|+||||+|++|++||||||.++. +.+++++.++++.+++++++..+|+|++|.+||+|.+
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99986 599999999999999999999875 5789999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEE
Q 000553 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 813 (1428)
Q Consensus 734 LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~ 813 (1428)
|||||||||+||||++++|+|+|||||||+||+++++++++.+. . .++|+|+||||++.+..||+|++|++|++++
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~-~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLR-R---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHH-h---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999842 2 4799999999999999999999999999999
Q ss_pred ecChHHHHhccccC
Q 000553 814 IGSSADLAVSLYSG 827 (1428)
Q Consensus 814 ~g~~~el~~~~~~~ 827 (1428)
+|+++|+++..+.+
T Consensus 692 ~G~~~~Ll~~~~~y 705 (710)
T TIGR03796 692 RGTHEELWAVGGAY 705 (710)
T ss_pred ecCHHHHHHcCCcH
Confidence 99999998765443
No 37
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-67 Score=666.53 Aligned_cols=481 Identities=22% Similarity=0.302 Sum_probs=387.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHH
Q 000553 941 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNIL 1020 (1428)
Q Consensus 941 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~ 1020 (1428)
|+++++++.++..++.++..++....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+.......+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44455555555666667767777778899999999999999999999999999999999999999999987666666666
Q ss_pred HHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHH
Q 000553 1021 LANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1099 (1428)
Q Consensus 1021 ~~~~~~~l~~~~~~-~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~ 1099 (1428)
+..++..++.++++ .+.+|.++++++..+.++..+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 66555444444443 34556554443333333333333333333333333444567788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHH------HHHH---HHHHHHHHHHHHHHHHHHH
Q 000553 1100 FMAKFKEHVVLYQRTSYSELTASL------------------WLSLRL------QVGL---ALSYAAPIVSLLGNFLSSF 1152 (1428)
Q Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~------------------wl~~~l------~~gl---~l~~~~~~~~~l~~~i~~~ 1152 (1428)
+.+++.+..++..+..+....... |++..+ .+|. ++.|...+...+..+...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998877765555443221111 111111 0221 2233444556666777788
Q ss_pred HHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcH
Q 000553 1153 TETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1232 (1428)
Q Consensus 1153 ~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGK 1232 (1428)
.++.....+.+|+.++.+.++|........+ +.+|.|+|+||+|+|+++.+++|+|+||+|+|||++||+|+|||||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGK 354 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGSGK 354 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCCCH
Confidence 8999999999999999987654322111111 2356899999999998655679999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHH
Q 000553 1233 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEV 1311 (1428)
Q Consensus 1233 STL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i 1311 (1428)
|||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||+|++|+||+||||.++. ..+|++++++++.+++++++
T Consensus 355 STLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i 434 (569)
T PRK10789 355 STLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDI 434 (569)
T ss_pred HHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999998774 57899999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhh
Q 000553 1312 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1389 (1428)
Q Consensus 1312 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~ 1389 (1428)
.++ |+||.++++|.+||||||||++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++++.
T Consensus 435 ~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~ 514 (569)
T PRK10789 435 LRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALT 514 (569)
T ss_pred HhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHH
Confidence 988 999999999999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred hcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1390 NMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1390 ~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
.||+|++|++|+++|.|+|++|++++ +.|++|++.
T Consensus 515 ~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~ 549 (569)
T PRK10789 515 EASEILVMQHGHIAQRGNHDQLAQQS-GWYRDMYRY 549 (569)
T ss_pred cCCEEEEEeCCEEEEecCHHHHHHcC-ChHHHHHHH
Confidence 99999999999999999999999865 699999874
No 38
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.8e-66 Score=671.08 Aligned_cols=535 Identities=21% Similarity=0.289 Sum_probs=443.8
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
.++..++.+++.+....+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555677888888888899999999999999999999987543333334445555666667777887788888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~ 426 (1428)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++-++..++ ++..-++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLV-IAIIGGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHH
Confidence 999999999999999999876 567899999998 799999986542 3334444444433333 33333444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1428)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1428)
++++.+.+..++.+++.+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778888899999999999999999999999999999999999999999999888777777776666655444
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhh
Q 000553 507 FWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 584 (1428)
Q Consensus 507 ~~~~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 584 (1428)
+......+ +.++++|+|.+.++.+|++.+++++.++..+..|+..++..+..+.++.++++|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 43333222 3356678888888899999999999999999999999999999999999999999999987643221000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCC
Q 000553 585 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 664 (1428)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~ 664 (1428)
..+ .......|+++|++|+|+... +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 --~~~---------~~~~~~~I~~~~vsf~Y~~~~----~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 --FLH---------RPRLQGEIEFRNVSFAYPGQE----TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred --CCC---------CCCccceEEEEEEEEEeCCCC----ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 012235799999999997431 23599999999999999999999999999999999999999
Q ss_pred CeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCC
Q 000553 665 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1428)
Q Consensus 665 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~ 730 (1428)
+|+|.++| .|+||+|+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 6999999999999999999999986 789999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
|.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|+||||++.+..||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 443 456899999999999999999999999999
Q ss_pred EEEecChHHHHhc
Q 000553 811 VKWIGSSADLAVS 823 (1428)
Q Consensus 811 i~~~g~~~el~~~ 823 (1428)
++++|+++|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999764
No 39
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.5e-66 Score=658.70 Aligned_cols=516 Identities=23% Similarity=0.320 Sum_probs=404.7
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000553 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1428)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1428)
+++.++..++....++.+++.++..... .....++.+++++.++..+..++..........+....+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 101 (585)
T TIGR01192 25 VIANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIIS 101 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444555566666666666655532111 1111222222223333333333334444455555666677799999999
Q ss_pred CCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1428)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr 1064 (1428)
.|++||+++++|++++|+++|++.+.......+...+..++.+++.+++++..+|.++++++.+.+++..+.+.+.+..+
T Consensus 102 l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~ 181 (585)
T TIGR01192 102 MPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTK 181 (585)
T ss_pred CCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887777777777777666666777777777766655555555555566666666
Q ss_pred HHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHH
Q 000553 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS------------------LWLS 1126 (1428)
Q Consensus 1065 ~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~------------------~wl~ 1126 (1428)
+..+......+.+.+++.|+++|++|||+|+.++.+.+++.+..++..+..+...... .|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 261 (585)
T TIGR01192 182 NGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIG 261 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666677788999999999999999999999998888887776555433321111 1111
Q ss_pred HHHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCC-CCCccEEEEE
Q 000553 1127 LRLQ------VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW-PFQGLIEFQN 1196 (1428)
Q Consensus 1127 ~~l~------~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~w-p~~g~I~f~n 1196 (1428)
..+- +| ..+.++..+...+..+...+.++.....+.+|+.++.+.+++...... + ..+ +..+.|+|+|
T Consensus 262 ~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~~~ 339 (585)
T TIGR01192 262 TVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAVEFRH 339 (585)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeEEEEE
Confidence 1110 22 123344455666777788888888899999999999876654321111 1 112 2356899999
Q ss_pred EEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc
Q 000553 1197 VTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP 1276 (1428)
Q Consensus 1197 vs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp 1276 (1428)
|+|+|+++ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+++++|||||
T Consensus 340 v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~ 418 (585)
T TIGR01192 340 ITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDA 418 (585)
T ss_pred EEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCC
Confidence 99999754 46899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000553 1277 FLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1353 (1428)
Q Consensus 1277 ~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEa 1353 (1428)
.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++|||||+++|+|||||||
T Consensus 419 ~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEp 498 (585)
T TIGR01192 419 GLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEA 498 (585)
T ss_pred ccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 999999999998764 46889999999999999999887 999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1354 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1354 TS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
||+||.+|++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|+++++...
T Consensus 499 ts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (585)
T TIGR01192 499 TSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKLLRRSG 571 (585)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHHHHhCc
Confidence 9999999999999999988889999999999999999999999999999999999999986 469999997653
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.8e-66 Score=665.89 Aligned_cols=535 Identities=19% Similarity=0.191 Sum_probs=421.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 274 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 353 (1428)
Q Consensus 274 ~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 353 (1428)
++.+++.++...++.++..++..+.|++++.++|.+....+...-...+..++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777888999999999999999999998864322222222223333444455555555555566677777788
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000553 354 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 432 (1428)
Q Consensus 354 L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~ 432 (1428)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+... .+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88899999999999888888999999999999999987543 45555555555555444443322222333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1428)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1428)
.+..++.++.++..++..+..++..+...|.++|+++||.+++|+.+.+++.+..++-.+...+.....+..........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888888999999999999999999999999999988777776654444433333332222222221111
Q ss_pred --HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000553 513 --TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1428)
Q Consensus 513 --~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1428)
..+.++.++.|.+.++.+|++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..|
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 223345677788888899999999999999999999999999999999999999999999976543221100 001
Q ss_pred cccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEE
Q 000553 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1428)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~ 670 (1428)
......|+++|++|+|+++++ +++|+|+||+|++||.++||||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 122356999999999985432 34599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
+| +|+||+|+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecC
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 816 (1428)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.+..||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999988872 2 346899999999999999999999999999999999
Q ss_pred hHHHHhccccC
Q 000553 817 SADLAVSLYSG 827 (1428)
Q Consensus 817 ~~el~~~~~~~ 827 (1428)
|+|++++.+.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765443
No 41
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.7e-66 Score=654.20 Aligned_cols=489 Identities=22% Similarity=0.312 Sum_probs=382.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhcccC-CCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000553 906 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1428)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1428)
++.++..++....++.+++..+... ..........+++.++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455555555666665555321 111111123345556666677778888888888999999999999999999999
Q ss_pred CCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1428)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr 1064 (1428)
.|..+|++.++|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++...++...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777777777766666666666766544333222222122222222222
Q ss_pred HHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HH
Q 000553 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL-------------------WL 1125 (1428)
Q Consensus 1065 ~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------wl 1125 (1428)
...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+.......... |.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334445677899999999999999999999999998877666554433221111 11
Q ss_pred HHHHH-----HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEE
Q 000553 1126 SLRLQ-----VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNV 1197 (1428)
Q Consensus 1126 ~~~l~-----~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nv 1197 (1428)
+..+. +| .++.++..+...+..+...+.++.....+.+|+.++++.++++.... +...+..+.|+|+||
T Consensus 250 ~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i~~~~v 326 (529)
T TIGR02857 250 GFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSLEFSGL 326 (529)
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeEEEEEE
Confidence 11110 22 12233444556667777888999999999999999998654322111 111223468999999
Q ss_pred EEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcc
Q 000553 1198 TMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF 1277 (1428)
Q Consensus 1198 s~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~ 1277 (1428)
+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||+
T Consensus 327 ~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~ 406 (529)
T TIGR02857 327 SVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPF 406 (529)
T ss_pred EEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCc
Confidence 99998655679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000553 1278 LFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1354 (1428)
Q Consensus 1278 lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaT 1354 (1428)
+|+|||||||.++. ..+|++++++++.++++++++++ ||||.++|+|.+||||||||++||||++++|+|+||||||
T Consensus 407 lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~t 486 (529)
T TIGR02857 407 LFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPT 486 (529)
T ss_pred ccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 99999999998764 46889999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEE
Q 000553 1355 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1397 (1428)
Q Consensus 1355 S~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl 1397 (1428)
|+||++|++.|++.|++..+++|+|+||||++++..||+|+||
T Consensus 487 s~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 487 AHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999888899999999999999999999986
No 42
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.1e-65 Score=661.71 Aligned_cols=535 Identities=21% Similarity=0.244 Sum_probs=431.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1428)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir 351 (1428)
..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777788889999999999999999999987543333333444555566667777777777888889999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000553 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-F-HDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1428)
Q Consensus 352 ~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~-~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~ 429 (1428)
..+...+|+|.++++...+++.+.|++++.++ |++.+.+.... + ..+...++.++..+++++.. ++.+++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~l~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQN-MLLFLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHH
Confidence 99999999999999999888899999999998 99998875432 2 22333343333333333322 223333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1428)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1428)
+.+.+..++.+++++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667788888899999999999999999999999999999999999888877765555554444444333333222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000553 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1428)
Q Consensus 510 ~~~--~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1428)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.++.++++|+.++++.++..+.....
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~-- 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR-- 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--
Confidence 222 2234567788888899999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeE
Q 000553 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1428)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~ 667 (1428)
.+ .....+.|+++|++|+|+.+ + ++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~--~---~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG--S---NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC--C---cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01233579999999999632 2 3599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCcccHHHHHhcCC--CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
|.++| .|+||||+|++|++||||||.+|. +.++++..++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 478889999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+|||||||||+||||++++|+|+|||||||+||+++++++.+.+ .. . +++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~-~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN-L-QDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH-h-cCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998884 33 3 679999999999999999999999999999
Q ss_pred EecChHHHHhccccC
Q 000553 813 WIGSSADLAVSLYSG 827 (1428)
Q Consensus 813 ~~g~~~el~~~~~~~ 827 (1428)
+.|+++|+++..+.+
T Consensus 688 ~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 688 EQGSHDELLDRNGFY 702 (708)
T ss_pred EECCHHHHHhcCCcH
Confidence 999999998765443
No 43
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-67 Score=665.73 Aligned_cols=492 Identities=22% Similarity=0.304 Sum_probs=355.7
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
+..++++|+++.|..... ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 10 ~~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccc
Confidence 346899999999964211 12469999999999999999999999999999999999999999987643
Q ss_pred -----------------cEEEEcCCC--CCCc-ccHHHHHhcCC----CCCh----HHHHHHHHHhcchHHHhcccCCCc
Q 000553 673 -----------------SIAYVPQVP--WILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDM 724 (1428)
Q Consensus 673 -----------------~i~y~~Q~p--~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~c~l~~di~~l~~gd~ 724 (1428)
.||||+|+| .++. .||+|||.++. ..+. ++..++++..+|.. . .
T Consensus 88 ~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-------~-~ 159 (623)
T PRK10261 88 IELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE-------A-Q 159 (623)
T ss_pred cccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC-------h-h
Confidence 489999998 4554 59999998752 1222 23444555555521 0 1
Q ss_pred ccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCE
Q 000553 725 AYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADM 802 (1428)
Q Consensus 725 t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~ 802 (1428)
........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+. .||+
T Consensus 160 ~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adr 238 (623)
T PRK10261 160 TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADR 238 (623)
T ss_pred hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCE
Confidence 123456679999999999999999999999999999999999999888875 33311 23789999999999876 4999
Q ss_pred EEEEeCCeEEEecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcC
Q 000553 803 VVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEG 882 (1428)
Q Consensus 803 i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 882 (1428)
|++|++|++++.|+++++...... ... ..
T Consensus 239 i~vl~~G~i~~~g~~~~~~~~~~~------~~~-----------------------------------~~---------- 267 (623)
T PRK10261 239 VLVMYQGEAVETGSVEQIFHAPQH------PYT-----------------------------------RA---------- 267 (623)
T ss_pred EEEeeCCeecccCCHHHhhcCCCC------hhh-----------------------------------hh----------
Confidence 999999999999988776321000 000 00
Q ss_pred cchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 000553 883 RVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFS 962 (1428)
Q Consensus 883 ~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 962 (1428)
++. ..+. +..+.. ..
T Consensus 268 ---------l~~---------------------~~~~--~~~~~~---~~------------------------------ 282 (623)
T PRK10261 268 ---------LLA---------------------AVPQ--LGAMKG---LD------------------------------ 282 (623)
T ss_pred ---------hhh---------------------ccCc--cccccc---cc------------------------------
Confidence 000 0000 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000553 963 FAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL 1042 (1428)
Q Consensus 963 ~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 1042 (1428)
.| +. .
T Consensus 283 ----------------------~~---------~~---------------~----------------------------- 287 (623)
T PRK10261 283 ----------------------YP---------RR---------------F----------------------------- 287 (623)
T ss_pred ----------------------CC---------cc---------------c-----------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1043 LLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS 1122 (1428)
Q Consensus 1043 ~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1122 (1428)
|.
T Consensus 288 ---------------------------------~~--------------------------------------------- 289 (623)
T PRK10261 288 ---------------------------------PL--------------------------------------------- 289 (623)
T ss_pred ---------------------------------cc---------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEEC
Q 000553 1123 LWLSLRLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYK 1202 (1428)
Q Consensus 1123 ~wl~~~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~ 1202 (1428)
.+ + ++-. . ..+.+.. ...+ +....++++|++++|+
T Consensus 290 --------------------------------~~----~-~~~~-~-~~~~~~~---~~~~---~~~~~L~~~~l~~~y~ 324 (623)
T PRK10261 290 --------------------------------IS----L-EHPA-K-QEPPIEQ---DTVV---DGEPILQVRNLVTRFP 324 (623)
T ss_pred --------------------------------cc----c-cccc-c-cCccccc---cccc---CCCceEEEeeeEEEEc
Confidence 00 0 0000 0 0000000 0000 1123599999999996
Q ss_pred CC---------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHhcceE
Q 000553 1203 PS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGRFA 1270 (1428)
Q Consensus 1203 ~~---------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~i~ 1270 (1428)
.. ...+|+||||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+.. .+|++|+
T Consensus 325 ~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~ 404 (623)
T PRK10261 325 LRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQ 404 (623)
T ss_pred CCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeE
Confidence 21 13699999999999999999999999999999999999999999999999999877643 4578899
Q ss_pred EEeCCcc--ccCC-cHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1271 VVPQSPF--LFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1271 ~VpQdp~--lf~g-TIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
||||+|. +++. ||++|+... +....++.. ....+.++.+||+ .........||||||||++|||||+
T Consensus 405 ~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~ 479 (623)
T PRK10261 405 FIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA-----ARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALA 479 (623)
T ss_pred EEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH-----HHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHh
Confidence 9999983 6654 999998531 111111111 1123444455775 3456666789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
.+|+||||||||++||..+.+.|.+.|++.. .+.|||+|||+++.+.. ||||++|++|+|+|.|+++++..++...|
T Consensus 480 ~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~ 559 (623)
T PRK10261 480 LNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPY 559 (623)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHH
Confidence 9999999999999999999999999998764 37899999999999986 89999999999999999999987665445
Q ss_pred H-HHHH
Q 000553 1420 S-SFVR 1424 (1428)
Q Consensus 1420 ~-~l~~ 1424 (1428)
. .++.
T Consensus 560 ~~~l~~ 565 (623)
T PRK10261 560 TRKLMA 565 (623)
T ss_pred HHHHHh
Confidence 3 3443
No 44
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.4e-64 Score=640.89 Aligned_cols=539 Identities=18% Similarity=0.201 Sum_probs=428.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1428)
Q Consensus 271 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 350 (1428)
..+++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667777777777777777888899999999987654322212222333344455566666666667778888999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000553 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1428)
Q Consensus 351 r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~ 429 (1428)
...+...+|+|.++++.....+.+.|++++.++.|++.+.+.. ..+..++..++.+++.+.+++..-++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888899999999999999998754 345555666666555554444433333343444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1428)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1428)
+.+.+..+..+++++..++.++..++..+...|.++|+++||.+|+|+.+.++.++.-++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667778888888899999999999999999999999999999988888877654444444444443333323222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000553 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1428)
Q Consensus 510 ~~~--~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1428)
... ..+.++.++.|.+..+.++++.+.+.++++..+..|+..+...+..+.++..+++|+.++++.++..+....
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~--- 333 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR--- 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---
Confidence 222 223345666777777889999999999999999999999999999999999999999999976543221000
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeE
Q 000553 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1428)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~ 667 (1428)
. .+.....|+++|++|+|++.+ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+
T Consensus 334 -~---------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 334 -V---------IERAKGDIEFRNVTFTYPGKE----VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred -C---------CCCCCCeEEEEEEEEecCCCC----CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 0 011234699999999997531 23599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCcccHHHHHhcCC--CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
|.++| .|+||||+|.+|++||+|||.+|. ++++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99976 589999999999999999999985 378999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+||||||||++||||+|++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|+++
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~ 557 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIV 557 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 433 44679999999999999999999999999999
Q ss_pred EecChHHHHhccccCc
Q 000553 813 WIGSSADLAVSLYSGF 828 (1428)
Q Consensus 813 ~~g~~~el~~~~~~~~ 828 (1428)
++|+++++++..+.+.
T Consensus 558 e~g~~~~l~~~~~~y~ 573 (582)
T PRK11176 558 ERGTHAELLAQNGVYA 573 (582)
T ss_pred EeCCHHHHHhCCChHH
Confidence 9999999987655443
No 45
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.4e-64 Score=639.13 Aligned_cols=535 Identities=20% Similarity=0.229 Sum_probs=437.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1428)
Q Consensus 271 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 350 (1428)
..+++.+++.++..++..++..++...+|++++.+++...........+.++++++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888888889999999999999999999986544322222333344455566666777777777888899999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000553 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1428)
Q Consensus 351 r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~ 429 (1428)
...+...+|+|.++.+.....+.+.|++.|.++.|++++..... .+..++...+.+++++.+++..-.+.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888888999999999999999987553 45555555555555544444433333444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1428)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1428)
+.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677888888999999999999999999999999999999999998888888776666655555444444333332
Q ss_pred HHHH--HHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcC
Q 000553 510 TTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1428)
Q Consensus 510 ~~~~--~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 587 (1428)
.... .+.++.+|.|.+..+.+|++.+++++.+++.+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---- 321 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---- 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 2222 2334566777788889999999999999999999999999999999999999999999997654322100
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeE
Q 000553 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1428)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~ 667 (1428)
.+. ......++++|++|+|++++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+
T Consensus 322 ~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 322 RAI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 000 11234699999999997532 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------cEEEEcCCCCCCcccHHHHHhcCC--CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
|.++| .|+||||+|++|++|+||||.++. +.++++..++++.|++++++..+|+|.+|.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 99987 499999999999999999999985 589999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.+..||+|++|++|+++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~ 546 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIV 546 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999887 443 45679999999999999999999999999999
Q ss_pred EecChHHHHhcc
Q 000553 813 WIGSSADLAVSL 824 (1428)
Q Consensus 813 ~~g~~~el~~~~ 824 (1428)
+.|+++++.+..
T Consensus 547 ~~g~~~~l~~~~ 558 (571)
T TIGR02203 547 ERGTHNELLARN 558 (571)
T ss_pred eeCCHHHHHHcC
Confidence 999999997653
No 46
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-67 Score=586.87 Aligned_cols=461 Identities=26% Similarity=0.400 Sum_probs=379.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHH-HHH
Q 000553 961 FSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQV 1039 (1428)
Q Consensus 961 ~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~ 1039 (1428)
.++...+..+-+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+.+.+..++-+...++++.+ ..|
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 3455666677777888888999999999988877776655444444445554555555555444444333333332 356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1040 FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL 1119 (1428)
Q Consensus 1040 ~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~ 1119 (1428)
|++++.+..+++|.++...-..-.-..||.-..+.+...+.-.+++-+-+|++.||.|+++..+|.+.++.++++.....
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 66666555555544432222222223344444555566677889999999999999999999999999999999988877
Q ss_pred HHHHHHHHHHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 000553 1120 TASLWLSLRLQ---------------------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1172 (1428)
Q Consensus 1120 ~~~~wl~~~l~---------------------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~ 1172 (1428)
..-.|+++... ....-.+..++..+++.+-..+.++.++....|+..+..+.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 77777765433 112334566777778888888999999999999999999887
Q ss_pred ccccccCCCCCCCCC-CCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEE
Q 000553 1173 QEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1251 (1428)
Q Consensus 1173 ~e~~~~~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~ 1251 (1428)
.|....+ ..++-|| ..|.|.|+||+|.|.+. .++|+|+||++++|+++||||++|+||||+..+|+|+|++++|.|.
T Consensus 244 ~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~ 321 (497)
T COG5265 244 AEVSDAP-DAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSIT 321 (497)
T ss_pred hhhccCC-CCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEE
Confidence 7653322 2344564 46889999999999876 4799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCC
Q 000553 1252 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1328 (1428)
Q Consensus 1252 IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1328 (1428)
|||+||..+..+.+|+.||+||||.+||++|+..|+.++++ .+++|++.|++.++++++++.+ |+||.|||+|-.||
T Consensus 322 id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklS 401 (497)
T COG5265 322 IDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLS 401 (497)
T ss_pred EcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeecc
Confidence 99999999999999999999999999999999999998764 6899999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecCh
Q 000553 1329 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1329 gGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p 1408 (1428)
||||||+++||++|++|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.++|.|+||++|+|+|.|+|
T Consensus 402 ggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h 481 (497)
T COG5265 402 GGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTH 481 (497)
T ss_pred CchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhccCCcHHHHHHH
Q 000553 1409 QTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1409 ~eLl~~~~s~f~~l~~ 1424 (1428)
+||+++ +|.|++||.
T Consensus 482 ~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 482 EELLAA-GGLYAEMWR 496 (497)
T ss_pred HHHHHc-CChHHHHhc
Confidence 999997 789999986
No 47
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.6e-65 Score=691.80 Aligned_cols=531 Identities=20% Similarity=0.289 Sum_probs=418.3
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 891 NYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRA 970 (1428)
Q Consensus 891 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 970 (1428)
.|.....+..+++.+++.++..++....++.+...++... .......+...+++++++..++.+++.+++.+.+.+.
T Consensus 52 ~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 128 (1466)
T PTZ00265 52 KCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKI 128 (1466)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444445555555555555555555321 1112334455666777778888899999999999999
Q ss_pred HHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000553 971 AVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWF 1050 (1428)
Q Consensus 971 ~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~ 1050 (1428)
..+++.+++++++++|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.++++++.++.
T Consensus 129 ~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~p 208 (1466)
T PTZ00265 129 LKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFP 208 (1466)
T ss_pred HHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998889999988888888888888888876665444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH-----------
Q 000553 1051 IYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL----------- 1119 (1428)
Q Consensus 1051 ~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~----------- 1119 (1428)
+++.+...+.+..+...+......+...+.+.|+++|++|||+|+.|+.+.++|.+..+...+..+...
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~ 288 (1466)
T PTZ00265 209 LIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMIN 288 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344443344444444455667889999999999999999999999999887777665543321
Q ss_pred -------HHHHHHHHHHHH--------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc
Q 000553 1120 -------TASLWLSLRLQV--------------GL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1175 (1428)
Q Consensus 1120 -------~~~~wl~~~l~~--------------gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~ 1175 (1428)
....|++.++-. |- .+.+.+.....+..+...+..+..+..|.+|+.+.++.+++.
T Consensus 289 ~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~ 368 (1466)
T PTZ00265 289 GFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLV 368 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 122344433211 11 111111112233455667788899999999999999877653
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEECCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEE-C
Q 000553 1176 LCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-D 1253 (1428)
Q Consensus 1176 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~I-D 1253 (1428)
.... .....|..+.|+|+||+|+|+... .++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++ |
T Consensus 369 ~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~ 446 (1466)
T PTZ00265 369 ENND--DGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIIND 446 (1466)
T ss_pred CCCC--CCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeC
Confidence 2111 111223345899999999997532 46999999999999999999999999999999999999999999999 6
Q ss_pred CeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC------------------------------------------
Q 000553 1254 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------ 1291 (1428)
Q Consensus 1254 G~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~------------------------------------------ 1291 (1428)
|.|+++++.+++|++|++|||+|.+|++||+|||.++.
T Consensus 447 g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (1466)
T PTZ00265 447 SHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMS 526 (1466)
T ss_pred CcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcc
Confidence 79999999999999999999999999999999997631
Q ss_pred ----------------CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000553 1292 ----------------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1353 (1428)
Q Consensus 1292 ----------------~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEa 1353 (1428)
..+|++++++++.+++++++..+ |+||.++++|.+||||||||++|||||+++|+|||||||
T Consensus 527 ~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEp 606 (1466)
T PTZ00265 527 NTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEA 606 (1466)
T ss_pred cccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 24678999999999999999998 999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCC-------------------------------
Q 000553 1354 TANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG------------------------------- 1400 (1428)
Q Consensus 1354 TS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G------------------------------- 1400 (1428)
||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 607 TSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1466)
T PTZ00265 607 TSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDN 686 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccc
Confidence 99999999999999999875 489999999999999999999999986
Q ss_pred ----------------eEEEecChhHHhccCCcHHHHHHHhh
Q 000553 1401 ----------------HLVEQGNPQTLLQDECSVFSSFVRAS 1426 (1428)
Q Consensus 1401 ----------------~ive~g~p~eLl~~~~s~f~~l~~~~ 1426 (1428)
+|+|+|+|+||+++++|.|+.|++.+
T Consensus 687 ~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 687 NNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred cccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999987789999999764
No 48
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.3e-66 Score=651.07 Aligned_cols=455 Identities=25% Similarity=0.344 Sum_probs=345.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------- 672 (1428)
.++++|+++.|+... ....+|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 488999999996321 112469999999999999999999999999999999999986 799997753
Q ss_pred ----------cEEEEcCCCC--CCc-ccHHHHHhcCC----CCC----hHHHHHHHHHhcchHHHhcccCCCcccccCCC
Q 000553 673 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1428)
Q Consensus 673 ----------~i~y~~Q~p~--l~~-~ti~~nI~~g~----~~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g 731 (1428)
.++|++|+|. ++. .|+++|+.++. ..+ .++..++++.+++.... .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 4899999985 443 59999986421 122 23445566666664210 0123455
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCC
Q 000553 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKG 809 (1428)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G 809 (1428)
.+|||||||||+||||++.+|+++||||||++||+...+++.+. +..... .++|+|+|||+++.+. .||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 68999999999999999999999999999999999999988875 322112 3789999999999876 49999999999
Q ss_pred eEEEecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHH
Q 000553 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1428)
Q Consensus 810 ~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1428)
++++.|+++++..... . .. .
T Consensus 234 ~i~~~g~~~~~~~~~~-------------------------------------------~---------------~~-~- 253 (529)
T PRK15134 234 RCVEQNRAATLFSAPT-------------------------------------------H---------------PY-T- 253 (529)
T ss_pred EEEEeCCHHHHhhCCC-------------------------------------------C---------------HH-H-
Confidence 9998887665431000 0 00 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1428)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 969 (1428)
..+.
T Consensus 254 ~~~~---------------------------------------------------------------------------- 257 (529)
T PRK15134 254 QKLL---------------------------------------------------------------------------- 257 (529)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000553 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1428)
Q Consensus 970 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~ 1049 (1428)
T Consensus 258 -------------------------------------------------------------------------------- 257 (529)
T PRK15134 258 -------------------------------------------------------------------------------- 257 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1428)
Q Consensus 1050 ~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l 1129 (1428)
. . .+
T Consensus 258 -----------~---------~---~~----------------------------------------------------- 261 (529)
T PRK15134 258 -----------N---------S---EP----------------------------------------------------- 261 (529)
T ss_pred -----------H---------h---Cc-----------------------------------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECC------
Q 000553 1130 QVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP------ 1203 (1428)
Q Consensus 1130 ~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~------ 1203 (1428)
+ .++.. . ++ +....|+++|++++|+.
T Consensus 262 ----------------------------------~------~~~~~----~-~~---~~~~~l~~~~l~~~~~~~~~~~~ 293 (529)
T PRK15134 262 ----------------------------------S------GDPVP----L-PE---PASPLLDVEQLQVAFPIRKGILK 293 (529)
T ss_pred ----------------------------------c------ccccc----c-CC---CCCCcccccCcEEEeecCccccc
Confidence 0 00000 0 00 01125899999999952
Q ss_pred ---CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---HhcceEEEeCCc-
Q 000553 1204 ---SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGRFAVVPQSP- 1276 (1428)
Q Consensus 1204 ---~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~i~~VpQdp- 1276 (1428)
+..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+|.+||.++...+... +|++++||||+|
T Consensus 294 ~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~ 372 (529)
T PRK15134 294 RTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPN 372 (529)
T ss_pred cccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCch
Confidence 12469999999999999999999999999999999999985 8999999999998766543 477899999998
Q ss_pred -cccCC-cHHHhcCcCC-----CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1277 -FLFEG-SLRDNLDPFH-----MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1277 -~lf~g-TIR~NLdp~~-----~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
.+|+. |+++|+.... ..+..+. +....+.++.+|++ ........+||||||||++|||||+.+|+||
T Consensus 373 ~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~ll 447 (529)
T PRK15134 373 SSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLI 447 (529)
T ss_pred hhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEE
Confidence 36664 9999996421 0111111 11233445555775 3456667789999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1349 CLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+++++++++.
T Consensus 448 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 448 ILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred EeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 9999999999999999999998764 27899999999999876 89999999999999999999987553
No 49
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-64 Score=635.39 Aligned_cols=497 Identities=19% Similarity=0.227 Sum_probs=382.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000553 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1428)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 986 (1428)
+.++..++....++.+....|..-..........++.+++++.++..++.+++.++....+.+....+++++++++++.|
T Consensus 14 ~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~ 93 (544)
T TIGR01842 14 FSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSAT 93 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34444455555566666555532111111112234445555566677778888888889999999999999999999999
Q ss_pred ccccccCChhhHHHHHhcChhhhhhhhhH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1428)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~ 1065 (1428)
+.. .|...+++++|++.+...+.. .+..++..++.++. ++++++.+|+++++++...+++..+..+..+..+.
T Consensus 94 ~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~ 167 (544)
T TIGR01842 94 LRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATKK 167 (544)
T ss_pred ccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 842 356788999999999887655 34444444444333 34455666665544332222222222222232233
Q ss_pred HHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHH
Q 000553 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA------------------SLWLSL 1127 (1428)
Q Consensus 1066 l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~------------------~~wl~~ 1127 (1428)
..+...+..+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..+..... ..|++.
T Consensus 168 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 247 (544)
T TIGR01842 168 PLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGA 247 (544)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334455666788999999999999999999999999888777655544322111 111221
Q ss_pred HHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEE
Q 000553 1128 RLQ------VG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVT 1198 (1428)
Q Consensus 1128 ~l~------~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs 1198 (1428)
.+- +| .++.+...+...+..+...+.++.....+.+|+.++++.++|+.... .. -+.++.|+++||+
T Consensus 248 ~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~---~~~~~~i~~~~v~ 323 (544)
T TIGR01842 248 YLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL---PEPEGHLSVENVT 323 (544)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC---CCCCCeEEEEEEE
Confidence 111 22 22334455667778888889999999999999999998766542111 11 1235689999999
Q ss_pred EEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc
Q 000553 1199 MRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL 1278 (1428)
Q Consensus 1199 ~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l 1278 (1428)
|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+++++|||||++
T Consensus 324 ~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~l 403 (544)
T TIGR01842 324 IVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVEL 403 (544)
T ss_pred EEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCccc
Confidence 99976556899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1279 FEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1279 f~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
|++|+|||+..+++ .+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|||||||||
T Consensus 404 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts 483 (544)
T TIGR01842 404 FPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNS 483 (544)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 99999999986654 7899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhc
Q 000553 1356 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
+||++|++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 484 ~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 484 NLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred ccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999998875 6899999999999999999999999999999999999976
No 50
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-66 Score=646.56 Aligned_cols=443 Identities=23% Similarity=0.328 Sum_probs=339.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC--CCeEEEEcC----------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~--~~G~i~~~~---------- 672 (1428)
.++++|+++.|.. . .+|+|+||++++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG---V---KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC---e---EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4889999999852 2 359999999999999999999999999999999999986 899998865
Q ss_pred ----cEEEEcCCCCCCcc-cHHHHHhcCCC------CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 ----SIAYVPQVPWILSG-TIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 ----~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|+|.++.. |++||+.++.. .+.+ +.+++++..++.. .......+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-----------NPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHH
Confidence 38999999987764 99999998642 1222 2233333333321 224456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecC
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 816 (1428)
|||||+||||+..+|+++||||||++||+...+.+++. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999988876 33212357899999999999865 99999999999987765
Q ss_pred hHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhh
Q 000553 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1428)
Q Consensus 817 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1428)
.+++... +. . ..+.
T Consensus 227 ~~~~~~~------------------------------------------------~~------------~---~~~~--- 240 (506)
T PRK13549 227 AAGMTED------------------------------------------------DI------------I---TMMV--- 240 (506)
T ss_pred cccCCHH------------------------------------------------HH------------H---HHhh---
Confidence 3321000 00 0 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1428)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1428)
. .
T Consensus 241 ------------------------------~---~--------------------------------------------- 242 (506)
T PRK13549 241 ------------------------------G---R--------------------------------------------- 242 (506)
T ss_pred ------------------------------C---c---------------------------------------------
Confidence 0 0
Q ss_pred HHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1428)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~ 1056 (1428)
+.
T Consensus 243 ---------~~--------------------------------------------------------------------- 244 (506)
T PRK13549 243 ---------EL--------------------------------------------------------------------- 244 (506)
T ss_pred ---------Cc---------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALS 1136 (1428)
Q Consensus 1057 ~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~ 1136 (1428)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECC-CCCccceeeeEE
Q 000553 1137 YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP-SLPAALHDINFT 1215 (1428)
Q Consensus 1137 ~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~-~~~~vL~~is~~ 1215 (1428)
.+ . .+.+ .++ +....|+++|++++|+. +..++|+|+||+
T Consensus 245 --------------------------~~---~--~~~~------~~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~ 284 (506)
T PRK13549 245 --------------------------TA---L--YPRE------PHT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFS 284 (506)
T ss_pred --------------------------cc---c--cccc------ccC---CCCceEEEecCccccccccccccccceeeE
Confidence 00 0 0000 000 11225999999999953 234699999999
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhcCCC-CCCceEEECCeeCCCCCh-HhHhcceEEEeCCc---cccC-CcHHHhcCc
Q 000553 1216 IEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV-RDLRGRFAVVPQSP---FLFE-GSLRDNLDP 1289 (1428)
Q Consensus 1216 I~~GekvgIvGrTGSGKSTL~~~L~rl~~-~~~G~I~IDG~di~~i~~-~~lR~~i~~VpQdp---~lf~-gTIR~NLdp 1289 (1428)
|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+. +..|++++|+||+| .+|+ .|+.+|+..
T Consensus 285 i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~ 364 (506)
T PRK13549 285 LRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITL 364 (506)
T ss_pred EcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhh
Confidence 99999999999999999999999999998 599999999999865543 45677899999997 3665 599999964
Q ss_pred CC--CC------ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHH
Q 000553 1290 FH--MN------DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1360 (1428)
Q Consensus 1290 ~~--~~------~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~ 1360 (1428)
.. .. +..+ .+....+.++.+|++. ........||||||||++||||++.+|+||||||||++||+.
T Consensus 365 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~ 439 (506)
T PRK13549 365 AALDRFTGGSRIDDAA-----ELKTILESIQRLKVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVG 439 (506)
T ss_pred hhhhhhccCcccChHH-----HHHHHHHHHHhcCccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHh
Confidence 21 11 1111 1112344555557753 455666789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1361 TASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1361 te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..|+++++.
T Consensus 440 ~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 440 AKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 9999999998753 48999999999999876 8999999999999999998874
No 51
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.9e-66 Score=646.61 Aligned_cols=437 Identities=22% Similarity=0.364 Sum_probs=337.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc--cCCCeEEEEc------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------ 671 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~--~~~~G~i~~~------------ 671 (1428)
++++|++++|.. . .+|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG---K---EVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC---e---EeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 357889988842 2 3599999999999999999999999999999999996 7999999874
Q ss_pred -----------C-----------------------cEEEEcCC-CCCCc-ccHHHHHhcCCC---CC----hHHHHHHHH
Q 000553 672 -----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGKN---YD----PQSYSETLK 708 (1428)
Q Consensus 672 -----------~-----------------------~i~y~~Q~-p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~ 708 (1428)
| .++|++|+ +.+++ .|++||+.++.. ++ .++..++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1 38999997 56665 599999987521 22 234555666
Q ss_pred HhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceE
Q 000553 709 ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTR 787 (1428)
Q Consensus 709 ~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ 787 (1428)
.++++... .....+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +..... .++|+
T Consensus 155 ~~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tv 222 (520)
T TIGR03269 155 MVQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISM 222 (520)
T ss_pred HcCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEE
Confidence 66665332 234568999999999999999999999999999999999999998775 332112 37899
Q ss_pred EEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCC
Q 000553 788 ILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSV 866 (1428)
Q Consensus 788 ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1428)
|+|||+++.+. .||+|++|++|+++..|+++++...
T Consensus 223 iivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------- 259 (520)
T TIGR03269 223 VLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------- 259 (520)
T ss_pred EEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-------------------------------------------
Confidence 99999999986 4999999999999876654332100
Q ss_pred CchhhHHHHHHHHhcCcchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHH
Q 000553 867 SDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLC 946 (1428)
Q Consensus 867 ~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~ 946 (1428)
|. ..
T Consensus 260 -------------------------~~---------------------------------~~------------------ 263 (520)
T TIGR03269 260 -------------------------FM---------------------------------EG------------------ 263 (520)
T ss_pred -------------------------HH---------------------------------hh------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHH
Q 000553 947 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1026 (1428)
Q Consensus 947 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1026 (1428)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHH
Q 000553 1027 LLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1106 (1428)
Q Consensus 1027 ~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1106 (1428)
..
T Consensus 264 ---------------------------------------~~--------------------------------------- 265 (520)
T TIGR03269 264 ---------------------------------------VS--------------------------------------- 265 (520)
T ss_pred ---------------------------------------ch---------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCC
Q 000553 1107 HVVLYQRTSYSELTASLWLSLRLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1186 (1428)
Q Consensus 1107 ~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~w 1186 (1428)
..+. +. ..+
T Consensus 266 -----------------------------------------------~~~~--------------~~------~~~---- 274 (520)
T TIGR03269 266 -----------------------------------------------EVEK--------------EC------EVE---- 274 (520)
T ss_pred -----------------------------------------------hhcc--------------cc------ccC----
Confidence 0000 00 000
Q ss_pred CCCccEEEEEEEEEECC---CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEEC-Ce---eCCC
Q 000553 1187 PFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD-GL---NIIN 1259 (1428)
Q Consensus 1187 p~~g~I~f~nvs~~Y~~---~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~ID-G~---di~~ 1259 (1428)
+....++++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++..
T Consensus 275 ~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~ 354 (520)
T TIGR03269 275 VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTK 354 (520)
T ss_pred CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccc
Confidence 01225999999999953 23469999999999999999999999999999999999999999999996 64 3333
Q ss_pred CC---hHhHhcceEEEeCCccccCC-cHHHhcCcC-C-CCChHHHHHHHHHccHHHHHHhCCCch-----hhhcCCCCCC
Q 000553 1260 TP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVLEKCHVKEEVEAVGLET-----FVKESGISFS 1328 (1428)
Q Consensus 1260 i~---~~~lR~~i~~VpQdp~lf~g-TIR~NLdp~-~-~~~d~ei~~aL~~~~l~~~i~~lgLdt-----~v~e~G~~LS 1328 (1428)
.+ ...+|++++|+||++.+|+. |+++|+... . ....++. +....+.++.+|++. ........||
T Consensus 355 ~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~~~LS 429 (520)
T TIGR03269 355 PGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELA-----RMKAVITLKMVGFDEEKAEEILDKYPDELS 429 (520)
T ss_pred cchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHH-----HHHHHHHHHhCCCCCccchhhhhCChhhCC
Confidence 32 23467789999999988875 999999631 1 1111111 111234445556643 3455666899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEe
Q 000553 1329 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQ 1405 (1428)
Q Consensus 1329 gGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1405 (1428)
||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.
T Consensus 430 gGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 509 (520)
T TIGR03269 430 EGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKI 509 (520)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999998764 27899999999999986 899999999999999
Q ss_pred cChhHHhc
Q 000553 1406 GNPQTLLQ 1413 (1428)
Q Consensus 1406 g~p~eLl~ 1413 (1428)
|+++++.+
T Consensus 510 g~~~~~~~ 517 (520)
T TIGR03269 510 GDPEEIVE 517 (520)
T ss_pred CCHHHHHh
Confidence 99998864
No 52
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.5e-63 Score=631.24 Aligned_cols=539 Identities=18% Similarity=0.216 Sum_probs=424.0
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
.++.+++.+++.++...++.++..++.++.|++++.+++.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888888999999999999999999974322222222223333444444555556667778888999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-HH--HHHhHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-LL--YTQVKFAFVSG 424 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~-lL--~~~lg~a~l~g 424 (1428)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+... .+..++...+.+++++. ++ .+.+++.++++
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999998887788899999999999999987643 34444444444333332 22 23333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1428)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1428)
+++.+.+..++.+++++..+++++..++..+.+.|.++|+++||.+++|+.+.+++++..++..+...+......+.
T Consensus 168 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 168 ---VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233344567788888899999999999999999999999999999999988888877665555544444333332
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000553 505 VFFWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1428)
Q Consensus 505 ~~~~~~~--~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 582 (1428)
..+.... ...+.++.+|+|.+..+.+|.+.+++...+...+..|+..++..+..+.++..+++||.++++.++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 2222111 22334455678888888999999999999999999999999999999999999999999999765421110
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc
Q 000553 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1428)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~ 662 (1428)
.... ..+ ......++++|++|+|+.+++ +++|+|+||+++|||.++|+|+||||||||+++|+|+++
T Consensus 325 ~~~~-~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~ 391 (576)
T TIGR02204 325 AHPK-TLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYD 391 (576)
T ss_pred CCCc-cCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccC
Confidence 0000 000 012346999999999975322 245999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCccccc
Q 000553 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1428)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig 728 (1428)
|.+|+|.++| .|+||||+|++|++||||||.+|.+ .++++..++++.+++.++++.+|+|++|.+|
T Consensus 392 p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~ 471 (576)
T TIGR02204 392 PQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLG 471 (576)
T ss_pred CCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeC
Confidence 9999999986 5999999999999999999999875 5778899999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeC
Q 000553 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1428)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 808 (1428)
++|.+||||||||++||||++++|+++|||||||+||+++++.+++. +.. ..+++|+|+|||+.+.++.+|+|++|++
T Consensus 472 ~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~ 549 (576)
T TIGR02204 472 ERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQ 549 (576)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999988876 443 4568999999999999999999999999
Q ss_pred CeEEEecChHHHHhccc
Q 000553 809 GQVKWIGSSADLAVSLY 825 (1428)
Q Consensus 809 G~i~~~g~~~el~~~~~ 825 (1428)
|++++.|+++++.+..+
T Consensus 550 g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 550 GRIVAQGTHAELIAKGG 566 (576)
T ss_pred CEEEeeecHHHHHHcCC
Confidence 99999999999876543
No 53
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.8e-63 Score=630.74 Aligned_cols=532 Identities=18% Similarity=0.229 Sum_probs=414.1
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc-hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGH-LD-GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 349 (1428)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (1428)
.+++.+++.++...++.++..++..+.|+++..++|.+....+. .. ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677777778888999999999999999999976442221 11 12223334445556666666677778889999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHhHHHHHHHH
Q 000553 350 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYL---LYTQVKFAFVSGL 425 (1428)
Q Consensus 350 ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~w~~p~~i~i~~~l---L~~~lg~a~l~g~ 425 (1428)
+...+...+|+|.++.+...+.+.+.|+++|.++.|++.+.+.... +..+....+.+++++.+ +.+.+++..++++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~ 175 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIF 175 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888889999999999999999875543 33333333333332222 2233333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000553 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 504 (1428)
Q Consensus 426 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 504 (1428)
++.+.+..+..++.++..++..+..++..+...|.++|+++||.++.|+.+.+++.+..++..+...+........
T Consensus 176 ---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 176 ---PAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222334455566667777777888888899999999999999999999999888876654444433322222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000553 505 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1428)
Q Consensus 505 ---~~~~~~~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 581 (1428)
..+......+..++ ++.+ +..+.++.+.+++++.++..+..|+..++..+..+.++..+.+||.++++.++.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLM-LFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHH-HHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 11111111111112 2223 356789999999999999999999999999999999999999999999976532111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc
Q 000553 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1428)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~ 661 (1428)
... . ......++++|++|+|+.+ . ++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~~---~-----------~~~~~~i~~~~v~f~y~~~--~---~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 NDD---R-----------PLQSGRIDIDNVSFAYRDD--N---LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CCc---c-----------CCCCCeEEEEEEEEEeCCC--C---ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 000 0 1123469999999999742 2 3599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCccccc
Q 000553 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1428)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig 728 (1428)
+|++|+|.++| +|+||||+|++|++||+|||.+|++.++++..+++++++++++++.+|+|.+|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeC
Q 000553 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1428)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 808 (1428)
++|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. +.+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4467999999999999999999999999
Q ss_pred CeEEEecChHHHHhccccCcc
Q 000553 809 GQVKWIGSSADLAVSLYSGFW 829 (1428)
Q Consensus 809 G~i~~~g~~~el~~~~~~~~~ 829 (1428)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876554443
No 54
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-65 Score=641.94 Aligned_cols=446 Identities=21% Similarity=0.329 Sum_probs=338.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|.. . .+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP---V---HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999999852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCcc-cHHHHHhcCCC-----C-----Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++.. .......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCC
Confidence 38999999987765 99999987632 0 11 12333444444432 1234556899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 814 (1428)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||+|++|++|++++.
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999988876 3221234789999999999986 4999999999999887
Q ss_pred cChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHh
Q 000553 815 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 894 (1428)
Q Consensus 815 g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 894 (1428)
|+++++... +.. ....+.
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~~----------- 244 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVGR----------- 244 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcCC-----------
Confidence 765443100 000 000000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 895 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 974 (1428)
Q Consensus 895 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 974 (1428)
..
T Consensus 245 --------------------------------~~---------------------------------------------- 246 (510)
T PRK09700 245 --------------------------------EL---------------------------------------------- 246 (510)
T ss_pred --------------------------------Cc----------------------------------------------
Confidence 00
Q ss_pred HHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000553 975 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1054 (1428)
Q Consensus 975 h~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~ 1054 (1428)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1055 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLA 1134 (1428)
Q Consensus 1055 i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~ 1134 (1428)
. .
T Consensus 247 ------------~-----~------------------------------------------------------------- 248 (510)
T PRK09700 247 ------------Q-----N------------------------------------------------------------- 248 (510)
T ss_pred ------------c-----c-------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeE
Q 000553 1135 LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINF 1214 (1428)
Q Consensus 1135 l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~ 1214 (1428)
+ +....+. ..++ +.+..++++|+++.|. .+|+|+||
T Consensus 249 -----------------------------~---~~~~~~~-----~~~~---~~~~~l~~~~l~~~~~----~~l~~isl 284 (510)
T PRK09700 249 -----------------------------R---FNAMKEN-----VSNL---AHETVFEVRNVTSRDR----KKVRDISF 284 (510)
T ss_pred -----------------------------c---ccccccc-----cccC---CCCcEEEEeCccccCC----CcccceeE
Confidence 0 0000000 0000 0122599999998763 38999999
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcceEEEeCCc---cccCC-cHHHhcCc
Q 000553 1215 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVVPQSP---FLFEG-SLRDNLDP 1289 (1428)
Q Consensus 1215 ~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~VpQdp---~lf~g-TIR~NLdp 1289 (1428)
+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++++||||++ .+|++ |+++|+..
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~ 364 (510)
T PRK09700 285 SVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAI 364 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcc
Confidence 999999999999999999999999999999999999999999876543 45678999999984 57765 99999875
Q ss_pred CCCCChH------HH-HHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHH
Q 000553 1290 FHMNDDL------KI-WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQT 1361 (1428)
Q Consensus 1290 ~~~~~d~------ei-~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~t 1361 (1428)
....... .. ...-++....+.++.+|+. .........||||||||++|||||+++|+||||||||++||..+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~ 444 (510)
T PRK09700 365 SRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGA 444 (510)
T ss_pred ccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHH
Confidence 3210000 00 0000111234455555775 34566667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1362 ASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1362 e~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.+++.+
T Consensus 445 ~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 445 KAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 999999998753 48899999999998875 89999999999999887733
No 55
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.4e-63 Score=623.25 Aligned_cols=505 Identities=19% Similarity=0.188 Sum_probs=391.0
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1428)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir 351 (1428)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777778888889999999999999999876532221111111222223445555666566667778889999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHH
Q 000553 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAI 427 (1428)
Q Consensus 352 ~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~w~~p~~i~i~~~l---L~~~lg~a~l~g~~v 427 (1428)
..+...+|+|.++++...+.+.++|+++|.++.|++++.+.... +..+....+.+++++.+ +.+.+++.+++++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999888899999999999999999886553 34444444433333332 333444433333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1428)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1428)
+.++ ...+..+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....+
T Consensus 166 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (529)
T TIGR02868 166 AGFV--APLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAA 243 (529)
T ss_pred HHHH--HHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 12233333455567777888999999999999999999999999999999887766666655555555444333
Q ss_pred HHHHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhh
Q 000553 508 WATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1428)
Q Consensus 508 ~~~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 585 (1428)
......+ +.++.++.|.+.++.++.+.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+.....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 323 (529)
T TIGR02868 244 QLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVP 323 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 3332222 33456677777888899999999999999999999999999999999999999999999765432110000
Q ss_pred cCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC
Q 000553 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1428)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~ 665 (1428)
.+. ........|+++|++|+|+++ ++ +|+|+||++++||.++||||||||||||+++|+|+++|++
T Consensus 324 --~~~-------~~~~~~~~I~~~~vsf~Y~~~--~~---vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~ 389 (529)
T TIGR02868 324 --AAG-------ALGLGKPTLELRDLSFGYPGS--PP---VLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQ 389 (529)
T ss_pred --CCc-------ccCCCCceEEEEEEEEecCCC--Cc---eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 000 001123469999999999743 22 5999999999999999999999999999999999999999
Q ss_pred eEEEEcC------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 666 GSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 666 G~i~~~~------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
|+|.++| +||||||+|++|++||||||.+|.+ .+++++.++++.|+++++++.+|+|++|.+||+|.
T Consensus 390 G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~ 469 (529)
T TIGR02868 390 GEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGA 469 (529)
T ss_pred cEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccC
Confidence 9999998 7999999999999999999999865 68899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCc
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 794 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~ 794 (1428)
+||||||||++||||++++|+|+|||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 470 ~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 470 RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999884 33 56789999999985
No 56
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.7e-65 Score=637.27 Aligned_cols=436 Identities=21% Similarity=0.297 Sum_probs=336.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|.. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG---V---KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC---e---EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4789999998852 2 359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCCCCc-ccHHHHHhcCCC-------CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 --SIAYVPQVPWILS-GTIRDNILFGKN-------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~-~ti~~nI~~g~~-------~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.++|++|++.++. .|++||+.++.. ++.+ +..++++.+++... ......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-----------SDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-----------ccCchhhCCHHH
Confidence 3899999997765 499999998642 1222 23334444444221 234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecCh
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 817 (1428)
|||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||+|++|++|++++.|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988765 3221234789999999999886 4999999999999876643
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhh
Q 000553 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1428)
Q Consensus 818 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1428)
+++.. ++..
T Consensus 226 ~~~~~-----------------------------------------------------~~~~------------------ 234 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DSLI------------------ 234 (501)
T ss_pred CcCCH-----------------------------------------------------HHHH------------------
Confidence 22100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1428)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 977 (1428)
..+...
T Consensus 235 -------------------------~~~~~~------------------------------------------------- 240 (501)
T PRK10762 235 -------------------------EMMVGR------------------------------------------------- 240 (501)
T ss_pred -------------------------HHhcCC-------------------------------------------------
Confidence 000000
Q ss_pred HHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1428)
Q Consensus 978 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~ 1057 (1428)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSY 1137 (1428)
Q Consensus 1058 ~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~ 1137 (1428)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEe
Q 000553 1138 AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIE 1217 (1428)
Q Consensus 1138 ~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~ 1217 (1428)
+.. ..++.. ..+ |.+-.++++|+++ ++|+|+||+|+
T Consensus 241 --------------------------~~~---~~~~~~-----~~~---~~~~~l~~~~l~~-------~~l~~vsl~i~ 276 (501)
T PRK10762 241 --------------------------KLE---DQYPRL-----DKA---PGEVRLKVDNLSG-------PGVNDVSFTLR 276 (501)
T ss_pred --------------------------Ccc---cccccc-----ccC---CCCcEEEEeCccc-------CCcccceEEEc
Confidence 000 000000 000 1112589999984 37999999999
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcceEEEeCCc---cccC-CcHHHhcCcCCC
Q 000553 1218 GGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM 1292 (1428)
Q Consensus 1218 ~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~VpQdp---~lf~-gTIR~NLdp~~~ 1292 (1428)
+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++||||+| .+|. .|+++|+.....
T Consensus 277 ~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~ 356 (501)
T PRK10762 277 KGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTAL 356 (501)
T ss_pred CCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhh
Confidence 999999999999999999999999999999999999999977654 34678899999997 3555 599999964210
Q ss_pred ---------CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHH
Q 000553 1293 ---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1362 (1428)
Q Consensus 1293 ---------~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te 1362 (1428)
.+..+. .....+.++.+|++ .........||||||||++|||||+.+|+||||||||++||+.+.
T Consensus 357 ~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~ 431 (501)
T PRK10762 357 RYFSRAGGSLKHADE-----QQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAK 431 (501)
T ss_pred hhhcccccccCHHHH-----HHHHHHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHH
Confidence 111111 11234455555774 345666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1363 SILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1363 ~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 432 ~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 432 KEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 99999998864 47899999999999876 8999999999999999988764
No 57
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.5e-63 Score=676.07 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHhhh--cCCccccccCCCCCCCCCCCc--cEEEEEEEEEEC--CCCCccceeeeEEEeCCcEEEEEC
Q 000553 1153 TETEKEMVSLERVLEYM--DVPQEELCGYQSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVGIVG 1226 (1428)
Q Consensus 1153 ~~~e~~~~sveRi~~~~--~~~~e~~~~~~~~~~~wp~~g--~I~f~nvs~~Y~--~~~~~vL~~is~~I~~GekvgIvG 1226 (1428)
.+.|..+.++||..++. +.+.|.......... .+.+| .++++||+++|+ ++.+.+|+|||++|+|||++||+|
T Consensus 718 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G 796 (1394)
T TIGR00956 718 ETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDM-EKESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMG 796 (1394)
T ss_pred cccccccccccccccCCCCccccccccccccccc-cccCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEEC
Confidence 44555667888888763 333332111111000 01134 479999999995 334579999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCC---CCCceEEECCeeCCCCChHhHhcceEEEeCCccc-cCCcHHHhcCcCC------CCChH
Q 000553 1227 RTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL-FEGSLRDNLDPFH------MNDDL 1296 (1428)
Q Consensus 1227 rTGSGKSTL~~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l-f~gTIR~NLdp~~------~~~d~ 1296 (1428)
|||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.+ +..||||||++.. ..+++
T Consensus 797 ~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~ 872 (1394)
T TIGR00956 797 ASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKS 872 (1394)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHH
Confidence 999999999999999998 78899999999985 2578999999999765 4569999997421 23333
Q ss_pred H----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC-EEEEeccccCCCHHHHHHHHHHHHH
Q 000553 1297 K----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNAISS 1371 (1428)
Q Consensus 1297 e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~-ILlLDEaTS~lD~~te~~Iq~~i~~ 1371 (1428)
+ +.++++..++.+ ..|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||..+...|++.|++
T Consensus 873 ~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~ 947 (1394)
T TIGR00956 873 EKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRK 947 (1394)
T ss_pred HHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 3 334445444433 25788888888999999999999999999997 9999999999999999999999988
Q ss_pred h-cCCcEEEEeccChhhh--hhcCEEEEEeCC-eEEEecChhH
Q 000553 1372 E-CKGMTVITIAHRISTV--LNMDEILILDHG-HLVEQGNPQT 1410 (1428)
Q Consensus 1372 ~-~~~~TvI~IaHrl~ti--~~~DrI~Vl~~G-~ive~g~p~e 1410 (1428)
. .+++|||+++|+++.. ..||+|++|++| +++++|++.+
T Consensus 948 la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 948 LADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 7 4689999999999974 468999999997 9999999743
No 58
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-62 Score=632.64 Aligned_cols=541 Identities=19% Similarity=0.212 Sum_probs=437.4
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
.++..++.+++.+....+..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788888899999999999999999999987543333344445566666677778888888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v 427 (1428)
++...+...+|+|.++++...+.+.++|++++.+ .|++.+.++.. .+..+....+.+++.+.+++..-++.+++.+++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 287 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGS 287 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998889999999998 69999988653 333333222322222333333333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1428)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1428)
+++.+.+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++.+.-++..+...+..........+
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR01846 288 LVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQA 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556667777888888888999999999999999999999999999999888887666666655555554444333
Q ss_pred HHHHHH--HHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhh
Q 000553 508 WATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1428)
Q Consensus 508 ~~~~~~--~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 585 (1428)
...... .+.++.+|+|.+..+.+|.|.++++..+...+..|+..+...+..+.++.++++|+.++++.++..+.. .
T Consensus 368 ~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~- 445 (694)
T TIGR01846 368 IELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G- 445 (694)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C-
Confidence 322222 233466788888888999999999999999999999999999999999999999999999765432210 0
Q ss_pred cCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC
Q 000553 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1428)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~ 665 (1428)
... .+..+..|+++|++|+|+++. +.+|+|+||++++||.++|+|+||||||||+++|+|+++|++
T Consensus 446 --~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~ 511 (694)
T TIGR01846 446 --LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511 (694)
T ss_pred --CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 000 012235799999999997432 235999999999999999999999999999999999999999
Q ss_pred eEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCC
Q 000553 666 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1428)
Q Consensus 666 G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g 731 (1428)
|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.+++++.++.+|+|.+|.+|++|
T Consensus 512 G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred ceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 9999987 4899999999999999999999864 6788999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeE
Q 000553 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1428)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 811 (1428)
.+||||||||++||||++++|+|+|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i 669 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQI 669 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999887 433 4568999999999999999999999999999
Q ss_pred EEecChHHHHhccccCc
Q 000553 812 KWIGSSADLAVSLYSGF 828 (1428)
Q Consensus 812 ~~~g~~~el~~~~~~~~ 828 (1428)
+++|+++++++..+.+.
T Consensus 670 ~~~g~~~~l~~~~~~y~ 686 (694)
T TIGR01846 670 AESGRHEELLALQGLYA 686 (694)
T ss_pred EEeCCHHHHHHcCChHH
Confidence 99999999987655443
No 59
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.7e-65 Score=634.63 Aligned_cols=451 Identities=21% Similarity=0.362 Sum_probs=345.0
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35899999999853 2359999999999999999999999999999999999999999999875
Q ss_pred ---cEEEEcCCCCCCcc-cHHHHHhcCCCCC---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 673 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
.++|++|++.++.. |++||+.++.... +++..++++..++... ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999987765 9999999875322 2344555666655422 2334568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhcc
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSL 824 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~~ 824 (1428)
||++.+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+. .||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999988876 3321234789999999999876 49999999999999888766542100
Q ss_pred ccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhhHHHHHHH
Q 000553 825 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 904 (1428)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 904 (1428)
.. .. +.
T Consensus 232 ------------------------------------------------~~---~~------------~~----------- 237 (510)
T PRK15439 232 ------------------------------------------------II---QA------------IT----------- 237 (510)
T ss_pred ------------------------------------------------HH---HH------------Hh-----------
Confidence 00 00 00
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q 000553 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1428)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 984 (1428)
.. .....
T Consensus 238 ----------------------~~--~~~~~------------------------------------------------- 244 (510)
T PRK15439 238 ----------------------PA--AREKS------------------------------------------------- 244 (510)
T ss_pred ----------------------Cc--ccccc-------------------------------------------------
Confidence 00 00000
Q ss_pred CCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1428)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr 1064 (1428)
T Consensus 245 -------------------------------------------------------------------------------- 244 (510)
T PRK15439 245 -------------------------------------------------------------------------------- 244 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSYAAPIVSL 1144 (1428)
Q Consensus 1065 ~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~~~~~~~~ 1144 (1428)
.+.
T Consensus 245 -~~~---------------------------------------------------------------------------- 247 (510)
T PRK15439 245 -LSA---------------------------------------------------------------------------- 247 (510)
T ss_pred -ccc----------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEE
Q 000553 1145 LGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGI 1224 (1428)
Q Consensus 1145 l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgI 1224 (1428)
..+.. ...|... ...+ +.+-.++++|++. .+|+|+||+|++||++||
T Consensus 248 -----------------~~~~~--~~~~~~~----~~~~---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l 294 (510)
T PRK15439 248 -----------------SQKLW--LELPGNR----RQQA---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGL 294 (510)
T ss_pred -----------------ccccc--ccccccc----cccC---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEE
Confidence 00000 0000000 0000 1122589999983 269999999999999999
Q ss_pred ECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-HhcceEEEeCCc---cccCC-cHHHhcCcC--C---CC-
Q 000553 1225 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVVPQSP---FLFEG-SLRDNLDPF--H---MN- 1293 (1428)
Q Consensus 1225 vGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~~VpQdp---~lf~g-TIR~NLdp~--~---~~- 1293 (1428)
+|+||||||||+++|.|+.+|++|+|.+||.++...+... .|++++|+||++ .+|+. |+++|+... . ..
T Consensus 295 ~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~ 374 (510)
T PRK15439 295 AGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWI 374 (510)
T ss_pred ECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhcccc
Confidence 9999999999999999999999999999999998776554 467899999996 36654 999998432 1 00
Q ss_pred ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHh
Q 000553 1294 DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE 1372 (1428)
Q Consensus 1294 ~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~ 1372 (1428)
...+. +....+.++.+|++ .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.
T Consensus 375 ~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l 449 (510)
T PRK15439 375 KPARE-----NAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSI 449 (510)
T ss_pred ChHHH-----HHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHH
Confidence 11111 11234555666775 4566667789999999999999999999999999999999999999999999876
Q ss_pred c-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1373 C-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1373 ~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
. +++|||+|+|+++.+.+ ||||++|++|++++.|+++++..+
T Consensus 450 ~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 450 AAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred HhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccCCHH
Confidence 4 48999999999999987 899999999999999999887654
No 60
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=7.3e-65 Score=634.21 Aligned_cols=447 Identities=21% Similarity=0.298 Sum_probs=334.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC--CCeEEEEcC-----------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~--~~G~i~~~~----------- 672 (1428)
++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~---~---~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG---V---KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC---e---EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998852 2 359999999999999999999999999999999999986 799998865
Q ss_pred ---cEEEEcCCCCCCcc-cHHHHHhcCCCC-------ChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|+|.++.. |++||+.++..+ +.+ +.+++++.+++.... ......+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN----------VTRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc----------ccCchhhCCHH
Confidence 38999999987765 999999886431 111 223344444332110 11234589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecC
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 816 (1428)
|||||+||||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++++.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999998876 33212357899999999999865 99999999999976543
Q ss_pred hHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhh
Q 000553 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1428)
Q Consensus 817 ~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1428)
.+++. . . . ....+
T Consensus 225 ~~~~~------------------------------------------------~-----~-~---------~~~~~---- 237 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D-D---------IITMM---- 237 (500)
T ss_pred cccCC------------------------------------------------H-----H-H---------HHHHH----
Confidence 21100 0 0 0 00000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1428)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1428)
.. .
T Consensus 238 -----------------------------~~---~--------------------------------------------- 240 (500)
T TIGR02633 238 -----------------------------VG---R--------------------------------------------- 240 (500)
T ss_pred -----------------------------hC---c---------------------------------------------
Confidence 00 0
Q ss_pred HHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1428)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~ 1056 (1428)
+
T Consensus 241 ---------~---------------------------------------------------------------------- 241 (500)
T TIGR02633 241 ---------E---------------------------------------------------------------------- 241 (500)
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALS 1136 (1428)
Q Consensus 1057 ~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~ 1136 (1428)
.
T Consensus 242 --------------------~----------------------------------------------------------- 242 (500)
T TIGR02633 242 --------------------I----------------------------------------------------------- 242 (500)
T ss_pred --------------------c-----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCC-CCccceeeeEE
Q 000553 1137 YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFT 1215 (1428)
Q Consensus 1137 ~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~ 1215 (1428)
+ . ..+.+. .+ +.+-.++++|++++|+.+ ...+|+|+||+
T Consensus 243 -------------------~-------~-----~~~~~~-----~~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~ 282 (500)
T TIGR02633 243 -------------------T-------S-----LYPHEP-----HE----IGDVILEARNLTCWDVINPHRKRVDDVSFS 282 (500)
T ss_pred -------------------c-------c-----cccccc-----cC----CCCceEEEeCCcccccccccccccccceeE
Confidence 0 0 000000 00 011259999999999432 24699999999
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhcCCCC-CCceEEECCeeCCCCC-hHhHhcceEEEeCCc---cccC-CcHHHhcCc
Q 000553 1216 IEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-VRDLRGRFAVVPQSP---FLFE-GSLRDNLDP 1289 (1428)
Q Consensus 1216 I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-~~G~I~IDG~di~~i~-~~~lR~~i~~VpQdp---~lf~-gTIR~NLdp 1289 (1428)
|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ ...+|++++++||++ .+|+ .|+++|+..
T Consensus 283 i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~ 362 (500)
T TIGR02633 283 LRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITL 362 (500)
T ss_pred EeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcc
Confidence 999999999999999999999999999995 8999999999986543 356788999999996 3666 499999975
Q ss_pred CCC--CCh-HHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHH
Q 000553 1290 FHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASIL 1365 (1428)
Q Consensus 1290 ~~~--~~d-~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~I 1365 (1428)
... ... ..+...-.+....+.++.+|+.. ........||||||||++|||||+++|++|||||||++||+.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l 442 (500)
T TIGR02633 363 SVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEI 442 (500)
T ss_pred hhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHH
Confidence 311 000 00000011122334555556642 34555568999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1366 QNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1366 q~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
.+.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++..++
T Consensus 443 ~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 443 YKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 99987753 47899999999999976 799999999999988766554
No 61
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.2e-62 Score=614.25 Aligned_cols=520 Identities=19% Similarity=0.224 Sum_probs=414.8
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 276 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 355 (1428)
Q Consensus 276 ~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~ 355 (1428)
.+++.++..+++.++..++..+.|++++.++|.+....+....+.+++.++++.++..++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777888889999999999999999999764322222334455556666777788888888888999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHH--HHHHHHHHhHHHHHHHHHHHHHH
Q 000553 356 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGV--ALYLLYTQVKFAFVSGLAITILL 431 (1428)
Q Consensus 356 ~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~w~~p~~i~i--~~~lL~~~lg~a~l~g~~v~~~~ 431 (1428)
..+|+|.++++... .+...+.++.|++++.+.... +..+...++.++. .++.+.+.+++.+++++++ .
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l---~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAVV---L 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---H
Confidence 99999999998732 245667788999999876543 3334444443333 2333344444444433322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 432 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 511 (1428)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 511 (1428)
..+..+..++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23445566777778888999999999999999999999999999999999888877666555554444443333332222
Q ss_pred H--HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCC
Q 000553 512 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 589 (1428)
Q Consensus 512 ~--~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~ 589 (1428)
. ..+.++++|.|.+.++.+|++.+++++.++..+..|+..+...+..+.++..+.+||.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 2 2234566788888888999999999999999999999999999999999999999999999765432110 00
Q ss_pred CcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEE
Q 000553 590 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 669 (1428)
Q Consensus 590 ~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~ 669 (1428)
. +..+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999997431 2359999999999999999999999999999999999999999999
Q ss_pred EcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 670 ASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 670 ~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
++| .++||||+|++|++|++|||.++.+ .+++++.++++.+++++.++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 876 5999999999999999999986554 78889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEec
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 815 (1428)
||||||++||||++++|+++|||||||+||+++++.+.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999999886 333123578999999999999999999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9999864
No 62
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=7.6e-62 Score=618.79 Aligned_cols=532 Identities=19% Similarity=0.206 Sum_probs=411.7
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1428)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~ 352 (1428)
.++.++..++..++..++..++.++.|+++..++|.+.++.. .. .+++.++++.++..+......+...++..+++.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888899999999999999999998764321 11 112222222233333333445556778888888
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH---HHHHHHHhHHHHHHHHHHH
Q 000553 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVA---LYLLYTQVKFAFVSGLAIT 428 (1428)
Q Consensus 353 ~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~---~~lL~~~lg~a~l~g~~v~ 428 (1428)
.+...+|+|.++++.....+.+.|++++.++.|++.+..... .+..+....+..++. ++.+.+.+++..+++ +
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~---~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVL---G 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 899999999999999888888999999999999999875432 333333332222222 223333344433333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1428)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1428)
++...+..++.+++.+.+++.++..++..+...|.++|+++||.++.|+.+.+++.+.-++-.+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344566777888888889999999999999999999999999999998777766554333333222222222222221
Q ss_pred H--HHHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000553 509 A--TTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1428)
Q Consensus 509 ~--~~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1428)
. .....+.++++++|.+..+.+|++.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1 112233456778888888899999999999999999999999999999999999999999999876432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCe
Q 000553 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1428)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G 666 (1428)
... .......|+++|++|+|+.+ ++ +|+|+||++++|+.++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~--~~---iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS--RQ---GVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC--Cc---eecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999742 23 59999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
+|.++| .|+||||+|++|++||||||.++++ .++++..++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999986 6999999999999999999999964 67888999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+||||||||++||||++++|+|+|||||||+||+++++.+++.+ .. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAAL-DE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998873 33 44679999999999999999999999999999
Q ss_pred EecChHHHHhccccCc
Q 000553 813 WIGSSADLAVSLYSGF 828 (1428)
Q Consensus 813 ~~g~~~el~~~~~~~~ 828 (1428)
++|+++++++..+.+.
T Consensus 549 ~~g~~~~l~~~~~~y~ 564 (588)
T PRK13657 549 ESGSFDELVARGGRFA 564 (588)
T ss_pred EeCCHHHHHHCCChHH
Confidence 9999999986654433
No 63
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.3e-62 Score=615.16 Aligned_cols=534 Identities=19% Similarity=0.209 Sum_probs=415.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1428)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (1428)
+.+.+++.++..++..++..++..+.|.+++.+++... .... .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999998642 2211 0111112333444556677777777778888999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHhHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 424 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~---lL~~~lg~a~l~g 424 (1428)
++...+...+|+|.++++....++.+.|++++.++.|++.+..+.. .+..+....+.+++++. .+.+.+++..+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888999999999999999998664 34444444444433332 3333444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1428)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1428)
++++ ...+..++.++.++..++..+..++..+.+.|.++|+++||.||.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 LLLL--LLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22233455677778888888999999999999999999999999999988888877655444444444443333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh
Q 000553 505 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1428)
Q Consensus 505 ~~~~~~~~--~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 581 (1428)
..+..... ..+.++.++.+. .++.++.+..++++.+..++ ..|+..++..+..+.++.++.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222221 122334556665 46678999888877665443 468888899999999999999999999976532111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc
Q 000553 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1428)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~ 661 (1428)
... .+. ......++++|++|+|++++ +++|+|+||++++||.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11235699999999997431 23599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccc
Q 000553 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 727 (1428)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~i 727 (1428)
+|++|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999986 4999999999999999999999875 688899999999999999999 99999999
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEe
Q 000553 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 807 (1428)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 807 (1428)
||+|.+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999887 433 456899999999999999999999999
Q ss_pred CCeEEEecChHHHHhccccCc
Q 000553 808 KGQVKWIGSSADLAVSLYSGF 828 (1428)
Q Consensus 808 ~G~i~~~g~~~el~~~~~~~~ 828 (1428)
+|++++.|+++|+++..+.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987765443
No 64
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-63 Score=625.23 Aligned_cols=472 Identities=17% Similarity=0.273 Sum_probs=333.5
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--cEEEEcCCCCC
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 683 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--~i~y~~Q~p~l 683 (1428)
++++|+++.|+. +++|+|+||+|++|++++|+||||||||||+++|.|+++|++|+|.+++ .|+|++|++.+
T Consensus 2 l~i~~ls~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~ 75 (530)
T PRK15064 2 LSTANITMQFGA------KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFA 75 (530)
T ss_pred EEEEEEEEEeCC------cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCc
Confidence 678999999853 2359999999999999999999999999999999999999999999975 69999999877
Q ss_pred Ccc-cHHHHHhcCCCC-------------------C--------------------hHHHHHHHHHhcchHHHhcccCCC
Q 000553 684 LSG-TIRDNILFGKNY-------------------D--------------------PQSYSETLKACTLDVDISLMVGGD 723 (1428)
Q Consensus 684 ~~~-ti~~nI~~g~~~-------------------~--------------------~~~~~~v~~~c~l~~di~~l~~gd 723 (1428)
+.. |++||+.++... + +++..++++..++....
T Consensus 76 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------- 148 (530)
T PRK15064 76 FEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQ------- 148 (530)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhH-------
Confidence 654 999999875310 0 01112222222222111
Q ss_pred cccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCE
Q 000553 724 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADM 802 (1428)
Q Consensus 724 ~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~ 802 (1428)
......+|||||||||+||||++.+|+++||||||++||+...+++.+. +. ..++|+|+|||+++.+.. ||+
T Consensus 149 ---~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~---~~~~tiiivsHd~~~~~~~~d~ 221 (530)
T PRK15064 149 ---HYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDV-LN---ERNSTMIIISHDRHFLNSVCTH 221 (530)
T ss_pred ---hcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHH-HH---hCCCeEEEEeCCHHHHHhhcce
Confidence 1234568999999999999999999999999999999999999988876 32 247899999999999865 999
Q ss_pred EEEEeCCeEE-EecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhc
Q 000553 803 VVVMDKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKE 881 (1428)
Q Consensus 803 i~~l~~G~i~-~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 881 (1428)
|++|++|+++ +.|+++++...... .. ... . ...+..+++.++
T Consensus 222 i~~l~~g~i~~~~g~~~~~~~~~~~----------------~~-------~~~-----~--------~~~~~~~~~~~~- 264 (530)
T PRK15064 222 MADLDYGELRVYPGNYDEYMTAATQ----------------AR-------ERL-----L--------ADNAKKKAQIAE- 264 (530)
T ss_pred EEEEeCCEEEEecCCHHHHHHHHHH----------------HH-------HHH-----H--------HHHHHHHHHHHH-
Confidence 9999999994 78888876431000 00 000 0 000000000000
Q ss_pred CcchHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHH
Q 000553 882 GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAF 961 (1428)
Q Consensus 882 g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~ 961 (1428)
+..|..... ..
T Consensus 265 ----------------------------------------~~~~~~~~~---~~-------------------------- 275 (530)
T PRK15064 265 ----------------------------------------LQSFVSRFS---AN-------------------------- 275 (530)
T ss_pred ----------------------------------------HHHHHHHhh---cc--------------------------
Confidence 000000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000553 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1041 (1428)
Q Consensus 962 ~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 1041 (1428)
+ +
T Consensus 276 -----------------------~------------------~------------------------------------- 277 (530)
T PRK15064 276 -----------------------A------------------S------------------------------------- 277 (530)
T ss_pred -----------------------c------------------h-------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1042 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1121 (1428)
Q Consensus 1042 ~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1121 (1428)
+ ........+
T Consensus 278 ---------------~-~~~~~~~~~------------------------------------------------------ 287 (530)
T PRK15064 278 ---------------K-AKQATSRAK------------------------------------------------------ 287 (530)
T ss_pred ---------------h-hHHHHHHHH------------------------------------------------------
Confidence 0 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-ccccCCC-CCCCCCCCccEEEEEEEE
Q 000553 1122 SLWLSLRLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE-ELCGYQS-LSPDWPFQGLIEFQNVTM 1199 (1428)
Q Consensus 1122 ~~wl~~~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e-~~~~~~~-~~~~wp~~g~I~f~nvs~ 1199 (1428)
..++... ...++. ....... +...-+.+..|+++|+++
T Consensus 288 ---------------------------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 327 (530)
T PRK15064 288 ---------------------------------------QIDKIKL-EEVKPSSRQNPFIRFEQDKKLHRNALEVENLTK 327 (530)
T ss_pred ---------------------------------------HHhhccc-cccCCccccCceeeCCCCCCCCCceEEEEeeEE
Confidence 0000000 000000 0000000 000001134699999999
Q ss_pred EECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcc--
Q 000553 1200 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-- 1277 (1428)
Q Consensus 1200 ~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-- 1277 (1428)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +++++|+||++.
T Consensus 328 ~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~ 394 (530)
T PRK15064 328 GFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDHAYD 394 (530)
T ss_pred eeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEccccccc
Confidence 9964 3599999999999999999999999999999999999999999999987 357999999984
Q ss_pred ccC-CcHHHhcCcCCC--CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000553 1278 LFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1353 (1428)
Q Consensus 1278 lf~-gTIR~NLdp~~~--~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEa 1353 (1428)
+++ .|+++|+..+.. ..++++.++++.. |+. .........||||||||++||||++++|+|||||||
T Consensus 395 ~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEP 465 (530)
T PRK15064 395 FENDLTLFDWMSQWRQEGDDEQAVRGTLGRL---------LFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEP 465 (530)
T ss_pred CCCCCcHHHHHHHhccCCccHHHHHHHHHHc---------CCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 443 599999864321 1223344444444 553 344556678999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEE-EecChhHHhccC
Q 000553 1354 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQDE 1415 (1428)
Q Consensus 1354 TS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~g~p~eLl~~~ 1415 (1428)
|++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ +.|+++++++.+
T Consensus 466 t~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~ 527 (530)
T PRK15064 466 TNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRSQ 527 (530)
T ss_pred CCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHHh
Confidence 9999999999999999876 4699999999999886 8999999999998 789999987643
No 65
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-64 Score=629.93 Aligned_cols=444 Identities=20% Similarity=0.279 Sum_probs=335.1
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG---V---KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC---E---EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4789999999853 1 359999999999999999999999999999999999999999998764
Q ss_pred --cEEEEcCCCCCCcc-cHHHHHhcCCC------CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.|+|++|+|.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 48999999988765 99999998631 122 233444555544311 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 818 (1428)
||++||||+..+|+++||||||++||+.+.+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVI-RELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 9999999999999999999999999999999988763 3212347899999999998765 9999999999987543200
Q ss_pred HHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhhH
Q 000553 819 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 898 (1428)
Q Consensus 819 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 898 (1428)
+ . . . .+. +..
T Consensus 226 ~-------------~---------------------------~-------~------~~~-------------~~~---- 235 (501)
T PRK11288 226 A-------------Q---------------------------V-------D------RDQ-------------LVQ---- 235 (501)
T ss_pred c-------------c---------------------------C-------C------HHH-------------HHH----
Confidence 0 0 0 0 000 000
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 899 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 978 (1428)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~l 978 (1428)
.+...
T Consensus 236 -------------------------~~~~~-------------------------------------------------- 240 (501)
T PRK11288 236 -------------------------AMVGR-------------------------------------------------- 240 (501)
T ss_pred -------------------------HhcCC--------------------------------------------------
Confidence 00000
Q ss_pred HhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 979 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1058 (1428)
Q Consensus 979 l~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~ 1058 (1428)
+
T Consensus 241 -------~------------------------------------------------------------------------ 241 (501)
T PRK11288 241 -------E------------------------------------------------------------------------ 241 (501)
T ss_pred -------C------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1059 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSYA 1138 (1428)
Q Consensus 1059 y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~~ 1138 (1428)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeC
Q 000553 1139 APIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEG 1218 (1428)
Q Consensus 1139 ~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~ 1218 (1428)
.++. .+.++ . + +.+..++++|++++ .+++|+||+|++
T Consensus 242 -----------------------~~~~-----~~~~~----~--~---~~~~~l~~~~~~~~------~~l~~isl~i~~ 278 (501)
T PRK11288 242 -----------------------IGDI-----YGYRP----R--P---LGEVRLRLDGLKGP------GLREPISFSVRA 278 (501)
T ss_pred -----------------------cccc-----ccccc----c--C---CCCcEEEEeccccC------CcccceeEEEeC
Confidence 0000 00000 0 0 01125899999742 489999999999
Q ss_pred CcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC-hHhHhcceEEEeCCcc---ccC-CcHHHhcCcCCC-
Q 000553 1219 GTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFAVVPQSPF---LFE-GSLRDNLDPFHM- 1292 (1428)
Q Consensus 1219 GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~~VpQdp~---lf~-gTIR~NLdp~~~- 1292 (1428)
||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|++++|+||+|. +|+ .|+.+|+.....
T Consensus 279 Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~ 358 (501)
T PRK11288 279 GEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARR 358 (501)
T ss_pred CcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccch
Confidence 9999999999999999999999999999999999999987543 3456789999999973 555 699999864311
Q ss_pred C-ChHHH--HHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHH
Q 000553 1293 N-DDLKI--WSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNA 1368 (1428)
Q Consensus 1293 ~-~d~ei--~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~ 1368 (1428)
. ..... ...-++....+.++.+|++ ........+||||||||++|||||+.+|++|||||||++||..+.+.+.+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 438 (501)
T PRK11288 359 HHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNV 438 (501)
T ss_pred hhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHH
Confidence 0 00000 0000011233455555773 345556678999999999999999999999999999999999999999999
Q ss_pred HHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1369 ISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1369 i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|++.. .+.|||+|||+++.+.. ||||++|++|++++.|++++...
T Consensus 439 l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 485 (501)
T PRK11288 439 IYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQATE 485 (501)
T ss_pred HHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEccccCCH
Confidence 97764 48899999999999976 79999999999999999987653
No 66
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.6e-62 Score=614.44 Aligned_cols=521 Identities=20% Similarity=0.240 Sum_probs=410.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000553 288 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 366 (1428)
Q Consensus 288 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~ 366 (1428)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556777889999999999875422 12223334444555556666666666677778889999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 367 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 444 (1428)
Q Consensus 367 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~w~~p~~i~i~~~lL~~~lg~-a~l~g~~v~~~~~~~~~~~~~~~~~ 444 (1428)
...+.+.+.|++++.+++|++.+.... ..+..++..++.+++++++++..++| .+++.++++++...+...+.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999998654 34555665555544444333223333 2233333333344455666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000553 445 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 522 (1428)
Q Consensus 445 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 522 (1428)
..++..+..++..+.+.|.++|+++||.+++|+.+.++..+..++..+...+.....+....+..... ..+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888899999999999999999999998887776544433333333333332222221111 1233456677
Q ss_pred HHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCC
Q 000553 523 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 602 (1428)
Q Consensus 523 y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1428)
|.+.++.+|++.+++++.+...+..|+..+++.+..+.++.++.+||.++++.++..+... .+ .+..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~---------~~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EP---------VPEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CC---------CCCC
Confidence 8888889999999999999999999999999999999999999999999997653211000 00 0112
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
+..|+++|++|+|+..+ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997431 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCcccHHHHHhcCC-CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000553 673 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1428)
.++||+|+|++|++|++|||.++. +.+++++.++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4788899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccC
Q 000553 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSG 827 (1428)
Q Consensus 749 y~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~ 827 (1428)
+++|+++|||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+++++|+++++.+..+.+
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y 543 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWY 543 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChH
Confidence 999999999999999999999999887 433 45689999999999999999999999999999999999998765443
No 67
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-64 Score=623.24 Aligned_cols=435 Identities=22% Similarity=0.320 Sum_probs=329.0
Q ss_pred EccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------cE
Q 000553 609 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 674 (1428)
Q Consensus 609 ~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------------~i 674 (1428)
+|+++.|+. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 467777742 2359999999999999999999999999999999999999999999865 38
Q ss_pred EEEcCCCCCCc-ccHHHHHhcCCC------CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 675 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 675 ~y~~Q~p~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
+|++|++.++. .|++||+.++.. .+.+ +.+++++.+++. ........+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHH
Confidence 99999997765 599999987632 1222 222333333332 1234456789999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||||+..+|+++||||||++||+.+.+++.+. +......++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999998876 3321235789999999999876 499999999999987765433100
Q ss_pred ccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhhHHHHH
Q 000553 823 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 902 (1428)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 902 (1428)
. +.. ..
T Consensus 224 ~------------------------------------------------~~~---~~----------------------- 229 (491)
T PRK10982 224 D------------------------------------------------KII---AM----------------------- 229 (491)
T ss_pred H------------------------------------------------HHH---HH-----------------------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000553 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1428)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 982 (1428)
+.. .
T Consensus 230 ----------------------~~~---~--------------------------------------------------- 233 (491)
T PRK10982 230 ----------------------MVG---R--------------------------------------------------- 233 (491)
T ss_pred ----------------------HhC---C---------------------------------------------------
Confidence 000 0
Q ss_pred cCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1428)
Q Consensus 983 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~ 1062 (1428)
+
T Consensus 234 ---~---------------------------------------------------------------------------- 234 (491)
T PRK10982 234 ---S---------------------------------------------------------------------------- 234 (491)
T ss_pred ---C----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSYAAPIV 1142 (1428)
Q Consensus 1063 sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~~~~~~ 1142 (1428)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEE
Q 000553 1143 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1222 (1428)
Q Consensus 1143 ~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~Gekv 1222 (1428)
+ .+ ..+.+. .+ +.+..|+++|++++| +++|+|+||+|++||++
T Consensus 235 ----------------~---~~-----~~~~~~-----~~----~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~ 277 (491)
T PRK10982 235 ----------------L---TQ-----RFPDKE-----NK----PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEIL 277 (491)
T ss_pred ----------------c---cc-----cccccc-----CC----CCCcEEEEeCccccc----CcccceeeEEEeCCcEE
Confidence 0 00 000000 00 112259999999975 25999999999999999
Q ss_pred EEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH-hHhcceEEEeCCcc---ccC-CcHHHh-----cCcCCC
Q 000553 1223 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFAVVPQSPF---LFE-GSLRDN-----LDPFHM 1292 (1428)
Q Consensus 1223 gIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~-~lR~~i~~VpQdp~---lf~-gTIR~N-----Ldp~~~ 1292 (1428)
||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++|+||++. +|+ .|+++| +.....
T Consensus 278 ~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (491)
T PRK10982 278 GIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKN 357 (491)
T ss_pred EEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcc
Confidence 99999999999999999999999999999999999876653 45778999999963 565 477766 321111
Q ss_pred ----CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHH
Q 000553 1293 ----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQN 1367 (1428)
Q Consensus 1293 ----~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~ 1367 (1428)
.+..+.. ....+.++.+|+. .........||||||||++||||++++|+||||||||++||+.+.+.+.+
T Consensus 358 ~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~ 432 (491)
T PRK10982 358 KVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQ 432 (491)
T ss_pred cccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHH
Confidence 1111111 1123445555663 23456667899999999999999999999999999999999999999999
Q ss_pred HHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1368 AISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1368 ~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++++++.
T Consensus 433 ~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 433 LIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 997753 58999999999999976 7999999999999888776554
No 68
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.5e-61 Score=650.96 Aligned_cols=220 Identities=22% Similarity=0.322 Sum_probs=187.7
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
...|+++|++++|+....++|+||||+|++||.+||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997534579999999999999999999999999999999999999999999999999965 45677889
Q ss_pred eEEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
|||+||++.+++. |++|||..+. ..+.+++.+. ..+.++.+||+...+.....||||||||++|||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 22344445666555666668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|+||+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999998853 58999999999999986 899999999999999999999654
No 69
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.5e-62 Score=558.48 Aligned_cols=530 Identities=20% Similarity=0.268 Sum_probs=446.5
Q ss_pred cchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 267 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 346 (1428)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1428)
.....+....++..|+..+++..+.+++.+..|+++-++.|.+-.+.+......+.+....+|+++.+++....+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777788888999999999999999999999999999998776777777888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000553 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-----NSFHDAWSLPFQIGVALYLLYTQVKFAF 421 (1428)
Q Consensus 347 ~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-----~~~~~~w~~p~~i~i~~~lL~~~lg~a~ 421 (1428)
+.++...|...||.-+++.+..........+.+ .|.+.+..+. ..+.++.+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976654433222222333 2666666654 347788889999887 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 422 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 501 (1428)
Q Consensus 422 l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 501 (1428)
++|.++++.+..+|-.+++ +..++-.++.-+|....+..++|..+|+.+|+.+...+++.+....-++...+.....
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999988888887776665 4566777888899999999999999999999999999999887766666554443333
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 000553 502 AWCVFFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 579 (1428)
Q Consensus 502 ~~~~~~~~~~~~~--~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 579 (1428)
.....+.-..-.+ +.++..|+|++.++++|++.++++..+......|+......+.++..|+.|++|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3222222222222 34567788999999999999999999999999999999999999999999999999999653322
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHc
Q 000553 580 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 659 (1428)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG 659 (1428)
++.. .. +.++..+.++++++.-|.. + +++++|+||++++|+-++|+||||||||||.++|.|
T Consensus 323 ~~~m---~L-----------P~P~g~L~Ve~l~~~PPg~-~---~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM---PL-----------PAPQGALSVERLTAAPPGQ-K---KPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC---CC-----------CCCCceeeEeeeeecCCCC-C---CcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 2111 11 2356788999999965432 2 345999999999999999999999999999999999
Q ss_pred CccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHh-cCCCCChHHHHHHHHHhcchHHHhcccCCCcc
Q 000553 660 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 725 (1428)
Q Consensus 660 ~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~-~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t 725 (1428)
..+|.+|.|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+|++|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999995 88889999999999999999999999999999
Q ss_pred cccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEE
Q 000553 726 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 805 (1428)
Q Consensus 726 ~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~ 805 (1428)
.||+.|.+|||||||||+||||+|.+|.+++||||.|+||.+-+..+.+. +.....+|.|+|+||||++.+..+|+|.+
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988877766 55546778899999999999999999999
Q ss_pred EeCCeEEEecChHHHHhc
Q 000553 806 MDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 806 l~~G~i~~~g~~~el~~~ 823 (1428)
|++|++...|+.+|..++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998765
No 70
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6e-61 Score=608.04 Aligned_cols=527 Identities=23% Similarity=0.285 Sum_probs=415.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 277 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1428)
Q Consensus 277 ~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~ 356 (1428)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++...+.+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77888888899999999999999999988762 1222223333444444455666666666677777899999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHH
Q 000553 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLL---YTQVKFAFVSGLAITILLI 432 (1428)
Q Consensus 357 ~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~-~p~~i~i~~~lL---~~~lg~a~l~g~~v~~~~~ 432 (1428)
.+|+|.++++...+++...|++++.++.|++.+............ .++.++..+.++ .+.+++..+++ .+++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI---LPLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Confidence 999999999998888888999999999999999987766422222 333332222222 22333333332 23333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Q 000553 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW--AT 510 (1428)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~--~~ 510 (1428)
....++.++.++..++..+..++..+.+.|.++|++.||.++.|+...++..+..++..+...+..........+. ..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566788888888999999999999999999999999997766665544333333322222222222111 11
Q ss_pred HHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000553 511 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1428)
Q Consensus 511 ~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1428)
.-....++.++.+.+..+.++.+.+.+.+.++..+..|+..+...+..+..+..+.+|+.++++.++....... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~----~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD----P- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC----C-
Confidence 22233445566777778889999999999999999999999999999999999999999999987543111000 0
Q ss_pred cccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEE
Q 000553 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1428)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~ 670 (1428)
.......|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999852 23499999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
+| +||||+|+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 76 5999999999999999999999988 588899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecC
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 816 (1428)
|||||++||||++++|+|++||||||+||+++++.|.+.+ .. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l-~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDAL-KK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHH-HH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999998874 32 457789999999999999999999999999999999
Q ss_pred hHHHHhccccCcc
Q 000553 817 SADLAVSLYSGFW 829 (1428)
Q Consensus 817 ~~el~~~~~~~~~ 829 (1428)
|+||+++.+.+.+
T Consensus 547 h~eLl~~~g~y~~ 559 (567)
T COG1132 547 HEELLAKGGLYAR 559 (567)
T ss_pred HHHHHHcCCHHHH
Confidence 9999987655543
No 71
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=7.5e-61 Score=603.00 Aligned_cols=507 Identities=21% Similarity=0.213 Sum_probs=399.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 278 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1428)
Q Consensus 278 ~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~ 356 (1428)
++.++..+++.++..++..+.|++++.++|.+. +.......+.+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889999999999999999999874 3222222333445555666677777777788888999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHH
Q 000553 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAITILLI 432 (1428)
Q Consensus 357 ~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~l---L~~~lg~a~l~g~~v~~~~~ 432 (1428)
.+|+|.++++.....+.++|+++|.++.|++.+.+... .+..+....+.+++++.+ +.+.+++..++++++ ..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l---~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPL---IP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH---HH
Confidence 99999999999888889999999999999999997654 355555544444333332 233444443333222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1428)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1428)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345677777788888899999999999999999999999999998888876654443433333333332222222222
Q ss_pred HHHH--HHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCC
Q 000553 513 TLFS--LFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1428)
Q Consensus 513 ~~~~--~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 590 (1428)
.+.. ++.++.+.+..+.+|.+.+++++.+...+..|+..+...+..+.++..+++|+.++++.++...... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 2211 1234445555778999999999999999999999999999999999999999999997442211000 000
Q ss_pred cccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEE
Q 000553 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1428)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~ 670 (1428)
......|+++|++|+|+..+ +++|+|+||++++|+.++|+||+|||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01224699999999997531 23599999999999999999999999999999999999999999999
Q ss_pred cC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
+| +++||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|.+|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 86 4999999999999999999999864 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEE
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l 806 (1428)
|||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+||||++.+..||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999985
No 72
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.8e-62 Score=614.84 Aligned_cols=479 Identities=23% Similarity=0.291 Sum_probs=331.5
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEc--CcEEEEcCCCC
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS--GSIAYVPQVPW 682 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~--~~i~y~~Q~p~ 682 (1428)
.++++|+++.|+.+ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++ ..||||+|+|+
T Consensus 6 ~l~i~~l~~~y~~~-----~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 80 (556)
T PRK11819 6 IYTMNRVSKVVPPK-----KQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQ 80 (556)
T ss_pred EEEEeeEEEEeCCC-----CeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCC
Confidence 58899999999521 235999999999999999999999999999999999999999999986 46999999999
Q ss_pred CCcc-cHHHHHhcCCC-C--------------C-h-H-------HHHHHHHHh---c---chHH----HhcccCCCcccc
Q 000553 683 ILSG-TIRDNILFGKN-Y--------------D-P-Q-------SYSETLKAC---T---LDVD----ISLMVGGDMAYI 727 (1428)
Q Consensus 683 l~~~-ti~~nI~~g~~-~--------------~-~-~-------~~~~v~~~c---~---l~~d----i~~l~~gd~t~i 727 (1428)
+++. |++||+.++.. + . + + .+.++.+.+ + .+.. ++.+ |- ...
T Consensus 81 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl-~~~ 157 (556)
T PRK11819 81 LDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL--RC-PPW 157 (556)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC--CC-Ccc
Confidence 8865 99999987521 0 0 0 0 011111100 0 0111 1111 00 012
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEE
Q 000553 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVM 806 (1428)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l 806 (1428)
.....+|||||||||+||||++.+|+++|||||||+||+...+++.+. +.. + +.|+|+|||+++++.. ||+|++|
T Consensus 158 ~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tviiisHd~~~~~~~~d~i~~l 233 (556)
T PRK11819 158 DAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQF-LHD-Y--PGTVVAVTHDRYFLDNVAGWILEL 233 (556)
T ss_pred cCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 445678999999999999999999999999999999999999988875 433 2 3599999999999875 9999999
Q ss_pred eCCeEE-EecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcch
Q 000553 807 DKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVE 885 (1428)
Q Consensus 807 ~~G~i~-~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 885 (1428)
++|+++ +.|+++++..... ... . ......+..+..
T Consensus 234 ~~g~i~~~~g~~~~~~~~~~----------~~~----------------~---------------~~~~~~~~~~~~--- 269 (556)
T PRK11819 234 DRGRGIPWEGNYSSWLEQKA----------KRL----------------A---------------QEEKQEAARQKA--- 269 (556)
T ss_pred eCCEEEEecCCHHHHHHHHH----------HHH----------------H---------------HHHHHHHHHHHH---
Confidence 999986 7788877642110 000 0 000000000000
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1428)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1428)
++ . +..|....
T Consensus 270 -------~~-----------------~---------~~~~~~~~------------------------------------ 280 (556)
T PRK11819 270 -------LK-----------------R---------ELEWVRQS------------------------------------ 280 (556)
T ss_pred -------HH-----------------H---------HHHHHHHh------------------------------------
Confidence 00 0 00000000
Q ss_pred HHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000553 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1428)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1428)
+ .+
T Consensus 281 --------------------~--------~~------------------------------------------------- 283 (556)
T PRK11819 281 --------------------P--------KA------------------------------------------------- 283 (556)
T ss_pred --------------------h--------hh-------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1428)
Q Consensus 1046 ~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1125 (1428)
+ .....+.
T Consensus 284 -----------~-~~~~~~~------------------------------------------------------------ 291 (556)
T PRK11819 284 -----------R-QAKSKAR------------------------------------------------------------ 291 (556)
T ss_pred -----------h-HHHHHHH------------------------------------------------------------
Confidence 0 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCccccccCCCCCCCCCCCccEEEEEEEEEECCC
Q 000553 1126 SLRLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM-DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS 1204 (1428)
Q Consensus 1126 ~~~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~-~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~ 1204 (1428)
....+|..+.. ..+++.. ....++...+.+..|+++|++++|++
T Consensus 292 ---------------------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~- 336 (556)
T PRK11819 292 ---------------------------------LARYEELLSEEYQKRNETN-EIFIPPGPRLGDKVIEAENLSKSFGD- 336 (556)
T ss_pred ---------------------------------HHHHHHhhcccccccCCCc-eeecCCCCCCCCeEEEEEeEEEEECC-
Confidence 00001111000 0000000 00001111122346999999999964
Q ss_pred CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc-cccCC-c
Q 000553 1205 LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP-FLFEG-S 1282 (1428)
Q Consensus 1205 ~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp-~lf~g-T 1282 (1428)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+++|+||++ .+++. |
T Consensus 337 -~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~t 404 (556)
T PRK11819 337 -RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKT 404 (556)
T ss_pred -eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEEEEEeCchhhcCCCCC
Confidence 3699999999999999999999999999999999999999999999954 2 1699999997 56654 9
Q ss_pred HHHhcCcCCCC----C-hHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccC
Q 000553 1283 LRDNLDPFHMN----D-DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTAN 1356 (1428)
Q Consensus 1283 IR~NLdp~~~~----~-d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~ 1356 (1428)
+++|+...... . +.+.. +.++.+|+.. ........||||||||++||||++.+|++|||||||++
T Consensus 405 v~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~ 475 (556)
T PRK11819 405 VWEEISGGLDIIKVGNREIPSR---------AYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTND 475 (556)
T ss_pred HHHHHHhhcccccccccHHHHH---------HHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 99998643211 1 11122 2344456643 34555668999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeC-CeEEE-ecChhHHhccC
Q 000553 1357 VDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QGNPQTLLQDE 1415 (1428)
Q Consensus 1357 lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-G~ive-~g~p~eLl~~~ 1415 (1428)
||+.+.+.+.+.|++. + .|||+|||+++.+.. ||||++|++ |++.+ .|+++++++++
T Consensus 476 LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 476 LDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred CCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 9999999999999875 4 489999999999876 899999986 88874 68898887654
No 73
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.2e-63 Score=617.98 Aligned_cols=443 Identities=19% Similarity=0.234 Sum_probs=332.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~ 76 (490)
T PRK10938 3 SLQISQGTFRLSD---T---KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQ 76 (490)
T ss_pred eEEEEeEEEEcCC---e---eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHH
Confidence 3789999999853 1 259999999999999999999999999999999999999999998754
Q ss_pred -cEEEEcCCCCC---------CcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.++|++|+|.+ +..|++||+.++.. ++++.+++++..+++... .....+|||||||||
T Consensus 77 ~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 144 (490)
T PRK10938 77 KLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKT 144 (490)
T ss_pred HHhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHH
Confidence 27999998743 14599999876532 345566777777765332 334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
+||||+..+|+++||||||++||+...+++.+.+ .....+++|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 145 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 223 (490)
T PRK10938 145 LLCQALMSEPDLLILDEPFDGLDVASRQQLAELL-ASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEIL 223 (490)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999888863 3212347899999999998765 9999999999999888766542
Q ss_pred hccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhhHHHH
Q 000553 822 VSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFIT 901 (1428)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~ 901 (1428)
.... . .+..+.
T Consensus 224 ~~~~----------------------------~-----------------------~~~~~~------------------ 234 (490)
T PRK10938 224 QQAL----------------------------V-----------------------AQLAHS------------------ 234 (490)
T ss_pred cchh----------------------------h-----------------------hhhhhh------------------
Confidence 1000 0 000000
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000553 902 LVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 981 (1428)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 981 (1428)
..+ ...
T Consensus 235 ---------------------~~~-~~~---------------------------------------------------- 240 (490)
T PRK10938 235 ---------------------EQL-EGV---------------------------------------------------- 240 (490)
T ss_pred ---------------------hcc-Ccc----------------------------------------------------
Confidence 000 000
Q ss_pred ccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 982 IVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRS 1061 (1428)
Q Consensus 982 vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~ 1061 (1428)
+
T Consensus 241 ----~--------------------------------------------------------------------------- 241 (490)
T PRK10938 241 ----Q--------------------------------------------------------------------------- 241 (490)
T ss_pred ----c---------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1062 TSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSYAAPI 1141 (1428)
Q Consensus 1062 ~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~~~~~ 1141 (1428)
.|
T Consensus 242 -------------~~----------------------------------------------------------------- 243 (490)
T PRK10938 242 -------------LP----------------------------------------------------------------- 243 (490)
T ss_pred -------------cC-----------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcE
Q 000553 1142 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQ 1221 (1428)
Q Consensus 1142 ~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~Gek 1221 (1428)
. ..+... ....+ +.+..|+++|++++|++ ..+|+|+||+|++||+
T Consensus 244 ----------------------------~-~~~~~~-~~~~~---~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~ 288 (490)
T PRK10938 244 ----------------------------E-PDEPSA-RHALP---ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEH 288 (490)
T ss_pred ----------------------------c-cccccc-ccccC---CCCceEEEeceEEEECC--eeEEeeceEEEcCCCE
Confidence 0 000000 00000 01235999999999964 3599999999999999
Q ss_pred EEEECCCCCcHHHHHHHHhcCCCC-CCceEEECCeeCCC-CChHhHhcceEEEeCCccccC---CcHHHhcCcC--C---
Q 000553 1222 VGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGRFAVVPQSPFLFE---GSLRDNLDPF--H--- 1291 (1428)
Q Consensus 1222 vgIvGrTGSGKSTL~~~L~rl~~~-~~G~I~IDG~di~~-i~~~~lR~~i~~VpQdp~lf~---gTIR~NLdp~--~--- 1291 (1428)
+||+|+||||||||+++|.|+.++ ++|+|.+||.++.. .+....|++++++||++.++. .|+++++.+. .
T Consensus 289 ~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (490)
T PRK10938 289 WQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIG 368 (490)
T ss_pred EEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccc
Confidence 999999999999999999998876 69999999987632 233456789999999986542 3677776421 1
Q ss_pred CC--ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHH
Q 000553 1292 MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNA 1368 (1428)
Q Consensus 1292 ~~--~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~ 1368 (1428)
.. .+.+. +....+.++.+|++. ........||||||||++|||||+++|+||||||||++||+++.+.+.+.
T Consensus 369 ~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 443 (490)
T PRK10938 369 IYQAVSDRQ-----QKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRF 443 (490)
T ss_pred cccCCCHHH-----HHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHH
Confidence 01 01111 011234444456665 45556678999999999999999999999999999999999999999999
Q ss_pred HHHhcC-C-cEEEEeccChhhhhh--cCEEEEEeCCeEEEec
Q 000553 1369 ISSECK-G-MTVITIAHRISTVLN--MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1369 i~~~~~-~-~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~g 1406 (1428)
|++..+ + .|||+|||+++.+.. ||+|++|++|++++.-
T Consensus 444 L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 444 VDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred HHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEee
Confidence 988643 3 479999999999975 6999999999998764
No 74
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.1e-61 Score=607.02 Aligned_cols=486 Identities=17% Similarity=0.171 Sum_probs=366.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 000553 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1428)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 986 (1428)
+.++...+....++.++.+.+.... ... ..+..++++.++..++.++..++....+.+...+++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444444555556666666543110 000 11223444455566677777888888999999999999999999999
Q ss_pred ccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1428)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l 1066 (1428)
+.||++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.++++++.++++...+..+..+..+..
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998775 356666666777777777777777766554433333222222222222222
Q ss_pred HHHHHhhcchhHHHHHHhhcchHHHHhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHH------------------HHHH
Q 000553 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTAS------------------LWLS 1126 (1428)
Q Consensus 1067 ~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~--~~~~~~~~~~~~~~~~~~~~~~~~------------------~wl~ 1126 (1428)
.+......+.+.+++.|.+.|+++||+|+.++ ...+++.+..++..+......... .|.+
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAA 259 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333445678899999999999999999953 445566665555544432211100 0110
Q ss_pred H---HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc-cc--cCC-C-C--CCCCCCCccEE
Q 000553 1127 L---RLQVG---LALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE-LC--GYQ-S-L--SPDWPFQGLIE 1193 (1428)
Q Consensus 1127 ~---~l~~g---l~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~-~~--~~~-~-~--~~~wp~~g~I~ 1193 (1428)
. .+.+| ..+.++..+...+..+...+.+++....|.+|+.++.+.+.++ .. ... . . .+.....+.|+
T Consensus 260 ~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 339 (555)
T TIGR01194 260 AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIE 339 (555)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEE
Confidence 0 00122 2233455566777888889999999999999999997642221 10 000 0 0 01112346899
Q ss_pred EEEEEEEECCC---CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1194 FQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1194 f~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++
T Consensus 340 ~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 419 (555)
T TIGR01194 340 LKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFS 419 (555)
T ss_pred EEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCc
Confidence 99999999753 246999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1271 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1271 ~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+|||||++|++|+|+|+.+ ..++++++++++.++++++++.+ |+||. .+||||||||++||||++++|+||
T Consensus 420 ~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~il 492 (555)
T TIGR01194 420 AIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPIL 492 (555)
T ss_pred EEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999999999999743 46788999999999999999888 99984 589999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHH-h-cCCcEEEEeccChhhhhhcCEEEEEeCCeEEEe
Q 000553 1349 CLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1405 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~-~-~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1405 (1428)
|||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 493 ilDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 493 LFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999887643 3 368999999999999999999999999999985
No 75
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-60 Score=561.22 Aligned_cols=523 Identities=22% Similarity=0.272 Sum_probs=415.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000553 285 GLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 364 (1428)
Q Consensus 285 ~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~ 364 (1428)
.++..+..+....|-.++-..++.+-..+.....+.++++++++.++++++.....+..++.+.++|..|...+++|..+
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~ 85 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAK 85 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555666667667666666554433344455667778888899999999999999999999999999999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 365 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 440 (1428)
Q Consensus 365 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~ 440 (1428)
++....+..++|++.+++..-+|.+...+. .....-..|+-+.++++++.+.-|...++.+..+.+++ ..+++
T Consensus 86 ~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---ilvg~ 162 (559)
T COG4988 86 LGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---ILVGL 162 (559)
T ss_pred CChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 998888888899999999999998877432 33344457778888888888776666655554444443 34455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 441 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWL----MKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFS 516 (1428)
Q Consensus 441 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i----~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1428)
..++..+++++.-..-.+..-+-|+|+.++|.|+-.+.-.++| ++.|+.-|+.++-.....+..-++... .+...
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l-siAlv 241 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL-SIALV 241 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 5556677777777777888889999999999999876655555 445665566554333222223333222 22222
Q ss_pred HHHHHHHHHhC-CCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCC
Q 000553 517 LFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 595 (1428)
Q Consensus 517 ~~~f~~y~~~~-~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~ 595 (1428)
.+.+ .+.+.+ ++++-...|.+|.+---+-.|+..+...+..-.++.++.+++..|++.|............
T Consensus 242 Av~~-g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~------- 313 (559)
T COG4988 242 AVYI-GFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV------- 313 (559)
T ss_pred HHHH-HHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc-------
Confidence 2333 334455 6899999999999999999999999999999999999999999999877643311100000
Q ss_pred CccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC---
Q 000553 596 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 672 (1428)
Q Consensus 596 ~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--- 672 (1428)
.+.+...+..+|.+|.|+..+ ++++|+||++++|++++|||+||||||||+++|+|+.+|++|+|.++|
T Consensus 314 ---~~~~~~ei~~~~l~~~y~~g~-----~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l 385 (559)
T COG4988 314 ---ANEPPIEISLENLSFRYPDGK-----PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDL 385 (559)
T ss_pred ---ccCCCceeeecceEEecCCCC-----cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccc
Confidence 012334555669999997542 459999999999999999999999999999999999999999999986
Q ss_pred ----------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
+++||+|+|.||++||||||+++++ -+++...++++..+|.+.++. |+|.+|.+||+|.+|||||+||
T Consensus 386 ~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 386 RDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred cccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHH
Confidence 5999999999999999999999987 568899999999999999998 9999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
|+||||+++++++||||||||+||+++++.|.+. +.. +.++||+|+||||++.+..+|+|++|++|+++++|+|+++.
T Consensus 465 laLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 465 LALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 9999999999999999999999999999988887 443 67789999999999999999999999999999999999998
Q ss_pred hccccCccc
Q 000553 822 VSLYSGFWS 830 (1428)
Q Consensus 822 ~~~~~~~~~ 830 (1428)
++.+.+.++
T Consensus 543 ~~~~~y~~l 551 (559)
T COG4988 543 EKQGLYANL 551 (559)
T ss_pred hcCcHHHHH
Confidence 777665543
No 76
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.8e-60 Score=598.54 Aligned_cols=532 Identities=18% Similarity=0.218 Sum_probs=411.5
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1428)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~ 352 (1428)
.++.+++.++..+++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..+++.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888899999999999999999999977542211 1111122222333334333445556778888898
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHH
Q 000553 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAIT 428 (1428)
Q Consensus 353 ~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~---lL~~~lg~a~l~g~~v~ 428 (1428)
.+...+|+|.++++...+.+.++|++++.++.|++.+..... .+..+...++.++++++ .+.+.+++.++ +++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l---~~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM---VLG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999988888999999999999999986543 33333444444433322 22233333333 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1428)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1428)
++...+..++.+++++..++..+..++..+.+.|.++|+++||.+|.|+.+.+++++..++-.+...+..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456677777788888888889999999999999999999999998887776654433333222222222222222
Q ss_pred HHHH--HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhc
Q 000553 509 ATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1428)
Q Consensus 509 ~~~~--~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 586 (1428)
.... ..+.++.+|.|.+.++.++.+.+++.+.++..+..|+..+...+..+.++..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 1111 123445678888888899999999999999999999999999999999999999999999976432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCe
Q 000553 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1428)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G 666 (1428)
.+. .+.....++++|++|+|+.+ . ++|+|+||++++|+.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~--~---~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS--S---QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC--C---ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999742 1 349999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
+|.++| .++||+|+|++|++|++|||.++.+ .++++..++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 5899999999999999999999864 56778888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998876 433 45689999999999999999999999999999
Q ss_pred EecChHHHHhccccCc
Q 000553 813 WIGSSADLAVSLYSGF 828 (1428)
Q Consensus 813 ~~g~~~el~~~~~~~~ 828 (1428)
++|+++++.++.+.+.
T Consensus 549 ~~g~~~~l~~~~~~y~ 564 (585)
T TIGR01192 549 EKGSFQELIQKDGRFY 564 (585)
T ss_pred EECCHHHHHHCCChHH
Confidence 9999999987655443
No 77
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=9.2e-62 Score=611.49 Aligned_cols=480 Identities=22% Similarity=0.285 Sum_probs=333.7
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--cEEEEcCCCC
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--~i~y~~Q~p~ 682 (1428)
.++++|++++|+.+ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ .|||++|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 47899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCc-ccHHHHHhcCCC-------------------CC--------hHHHHHHHHHhcch---HH----HhcccCCCcccc
Q 000553 683 ILS-GTIRDNILFGKN-------------------YD--------PQSYSETLKACTLD---VD----ISLMVGGDMAYI 727 (1428)
Q Consensus 683 l~~-~ti~~nI~~g~~-------------------~~--------~~~~~~v~~~c~l~---~d----i~~l~~gd~t~i 727 (1428)
+++ .|++|||.++.. .+ ..++.++++.++.. .. ++.+ |- ...
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l-~~~ 155 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RC-PPW 155 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CC-Ccc
Confidence 875 599999987521 01 01233444444432 11 1111 11 112
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEE
Q 000553 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVM 806 (1428)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l 806 (1428)
.....+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . ++|+|+|||+++++.. ||+|++|
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l 231 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILEL 231 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 456679999999999999999999999999999999999999988876 332 2 3699999999999875 8999999
Q ss_pred eCCeEE-EecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcch
Q 000553 807 DKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVE 885 (1428)
Q Consensus 807 ~~G~i~-~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 885 (1428)
++|+++ ..|+++++..... ... + ....+.+..
T Consensus 232 ~~g~i~~~~g~~~~~~~~~~----------~~~----------------~---------------~~~~~~~~~------ 264 (552)
T TIGR03719 232 DRGRGIPWEGNYSSWLEQKE----------KRL----------------E---------------QEEKEESAR------ 264 (552)
T ss_pred ECCEEEEecCCHHHHHHHHH----------HHH----------------H---------------HHHHHHHHH------
Confidence 999975 6788877643110 000 0 000000000
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1428)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 965 (1428)
...+.. ...|....
T Consensus 265 ----~~~~~~--------------------------~~~~~~~~------------------------------------ 278 (552)
T TIGR03719 265 ----QKALKR--------------------------ELEWVRSS------------------------------------ 278 (552)
T ss_pred ----HHHHHH--------------------------HHHHHHhh------------------------------------
Confidence 000000 00000000
Q ss_pred HHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000553 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1428)
Q Consensus 966 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1428)
+ .+
T Consensus 279 --------------------~--------~~------------------------------------------------- 281 (552)
T TIGR03719 279 --------------------P--------KA------------------------------------------------- 281 (552)
T ss_pred --------------------h--------hh-------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1428)
Q Consensus 1046 ~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl 1125 (1428)
. ..+.
T Consensus 282 -----------~-~~~~--------------------------------------------------------------- 286 (552)
T TIGR03719 282 -----------R-QAKS--------------------------------------------------------------- 286 (552)
T ss_pred -----------H-HHHH---------------------------------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcCCccccccCCCCCCCCCCCccEEEEEEEEEECCC
Q 000553 1126 SLRLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS 1204 (1428)
Q Consensus 1126 ~~~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~-~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~ 1204 (1428)
+......++..+. ...+++... ...+...-+.+..++++|++++|+.
T Consensus 287 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~- 334 (552)
T TIGR03719 287 ------------------------------KARLARYEELLSQEFQKRNETAE-IYIPPGPRLGDKVIEAENLSKGFGD- 334 (552)
T ss_pred ------------------------------HHHHHHHHhhhhhcccccCCCce-eecCCCCCCCCeEEEEeeEEEEECC-
Confidence 0000000111100 000000000 0000000012336999999999964
Q ss_pred CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcc-ccC-Cc
Q 000553 1205 LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFE-GS 1282 (1428)
Q Consensus 1205 ~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lf~-gT 1282 (1428)
.++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ ++ +++|+||++. +++ -|
T Consensus 335 -~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~t 402 (552)
T TIGR03719 335 -KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKT 402 (552)
T ss_pred -eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCc
Confidence 3699999999999999999999999999999999999999999999954 21 6999999973 665 49
Q ss_pred HHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCC
Q 000553 1283 LRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1358 (1428)
Q Consensus 1283 IR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD 1358 (1428)
+++|+..... ....+. ...+.++.+|++. ........||||||||++|||||+.+|++|||||||++||
T Consensus 403 v~e~l~~~~~~~~~~~~~~-------~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD 475 (552)
T TIGR03719 403 VWEEISGGLDIIQLGKREV-------PSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLD 475 (552)
T ss_pred HHHHHHhhccccccCcchH-------HHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Confidence 9999965321 111110 0123444456653 3455567899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeC-CeEEE-ecChhHHhcc
Q 000553 1359 AQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVE-QGNPQTLLQD 1414 (1428)
Q Consensus 1359 ~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-G~ive-~g~p~eLl~~ 1414 (1428)
+.+.+.+.+.|++. . .|||+|||+++.+.. ||||++|++ |++++ .|+++++.+.
T Consensus 476 ~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 476 VETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred HHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 99999999999876 3 489999999999986 899999997 68874 4888777643
No 78
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.4e-62 Score=541.82 Aligned_cols=460 Identities=25% Similarity=0.354 Sum_probs=348.4
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------ 672 (1428)
..+.++|.+.++.... ....++++|||++++||.+++||.||||||-..++++|.++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 3567888887776543 335679999999999999999999999999999999999865 467888765
Q ss_pred -----------cEEEEcCCCCC-Ccc--cHHHHH----hcCCCCC----hHHHHHHHHHhcchHHHhcccCCCcccccCC
Q 000553 673 -----------SIAYVPQVPWI-LSG--TIRDNI----LFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1428)
Q Consensus 673 -----------~i~y~~Q~p~l-~~~--ti~~nI----~~g~~~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~ 730 (1428)
+|++++|+|-- .|. ||-.-| ...+..+ +++.-+.++..++.+- ...+...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 332 665554 3333333 2333444445554321 1234556
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCC
Q 000553 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKG 809 (1428)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G 809 (1428)
...|||||||||-||.||..+||+||-||||.|||..+..+|++-+..-....|..+++||||+..+.. ||+|+||.+|
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G 234 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHG 234 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEecc
Confidence 679999999999999999999999999999999999999999986322113347799999999999986 9999999999
Q ss_pred eEEEecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHH
Q 000553 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1428)
Q Consensus 810 ~i~~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1428)
+++|+|+.+++...... .
T Consensus 235 ~ivE~~~t~~lF~~PqH-------------------------------------------------------------p- 252 (534)
T COG4172 235 EIVETGTTETLFAAPQH-------------------------------------------------------------P- 252 (534)
T ss_pred EEeecCcHHHHhhCCCC-------------------------------------------------------------h-
Confidence 99999876665321000 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1428)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 969 (1428)
|.
T Consensus 253 --YT---------------------------------------------------------------------------- 254 (534)
T COG4172 253 --YT---------------------------------------------------------------------------- 254 (534)
T ss_pred --HH----------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000553 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1428)
Q Consensus 970 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~ 1049 (1428)
T Consensus 255 -------------------------------------------------------------------------------- 254 (534)
T COG4172 255 -------------------------------------------------------------------------------- 254 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1428)
Q Consensus 1050 ~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l 1129 (1428)
|+
T Consensus 255 --------------r~---------------------------------------------------------------- 256 (534)
T COG4172 255 --------------RK---------------------------------------------------------------- 256 (534)
T ss_pred --------------HH----------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCC-----
Q 000553 1130 QVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS----- 1204 (1428)
Q Consensus 1130 ~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~----- 1204 (1428)
+++ .|+.. ..+|..-...-.++.+||...|+-.
T Consensus 257 --------------------------------------Ll~--aeP~g--~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~ 294 (534)
T COG4172 257 --------------------------------------LLA--AEPSG--DPPPLPEDAPVLLEVEDLRVWFPIKGGFLR 294 (534)
T ss_pred --------------------------------------HHh--cCCCC--CCCCCCCCCCceEEecceEEEEecCCcccc
Confidence 000 01111 1111111123367888888888532
Q ss_pred ----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---HhcceEEEeCCcc
Q 000553 1205 ----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGRFAVVPQSPF 1277 (1428)
Q Consensus 1205 ----~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~i~~VpQdp~ 1277 (1428)
.-.+.++|||+.++||.+||||+||||||||-.+|+|+++++ |+|.++|.||...+.++ +|+++-+|.|||+
T Consensus 295 r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPy 373 (534)
T COG4172 295 RTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPY 373 (534)
T ss_pred ccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCC
Confidence 124789999999999999999999999999999999999976 99999999999888765 5799999999997
Q ss_pred --ccC-CcHHHhcC----cCC-CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1278 --LFE-GSLRDNLD----PFH-MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1278 --lf~-gTIR~NLd----p~~-~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|=+ .||-+-+. -.. ..+ |+.+.+||+.+||+.. .....+..||||||||++||||+.-+|
T Consensus 374 gSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~--------~r~RYPhEFSGGQRQRIAIARAliLkP 445 (534)
T COG4172 374 GSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPA--------TRNRYPHEFSGGQRQRIAIARALILKP 445 (534)
T ss_pred CCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChh--------HhhcCCcccCcchhhHHHHHHHHhcCC
Confidence 222 25544432 111 112 3445666666654332 234556789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHH
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSF 1422 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l 1422 (1428)
++++||||||+||.--...|.+.+++.- .+-+-++|+|+|..++. ||+|+||.+|+|||+|+-+++++++...|.+-
T Consensus 446 ~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 446 ELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred cEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 9999999999999999999999998764 47799999999999987 89999999999999999999999998777653
No 79
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.9e-60 Score=652.76 Aligned_cols=522 Identities=19% Similarity=0.206 Sum_probs=372.7
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 887 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 966 (1428)
Q Consensus 887 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 966 (1428)
+..+..++..++..+... +..++..++....++.++..++.....+.......|..++++..++..++.....+.....
T Consensus 290 ~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (1495)
T PLN03232 290 WLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRV 368 (1495)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555565555444333 3345556666666777766555332111111111111111111122222211112223466
Q ss_pred HHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000553 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1428)
Q Consensus 967 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1046 (1428)
+.+....+...+++++++.|..++++..+|+++||+++|++.+++.. ..+..+....+.++..++++.....+..++.+
T Consensus 369 ~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~ 447 (1495)
T PLN03232 369 GFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASLFGS 447 (1495)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 77777888889999999999999999999999999999999999875 33444443333333333332221111112122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000553 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL--- 1123 (1428)
Q Consensus 1047 p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--- 1123 (1428)
++++++..+..++.+..+..++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........
T Consensus 448 ~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~ 527 (1495)
T PLN03232 448 LILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNS 527 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223333333334444445555677899999999999999999999999988766654443322211111
Q ss_pred -------------HHHHHH------HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCC
Q 000553 1124 -------------WLSLRL------QVGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQS 1181 (1428)
Q Consensus 1124 -------------wl~~~l------~~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~ 1181 (1428)
+++..+ .+|. ++.+...+...+..+...+..+.....|.+|+.++++.+++.... .
T Consensus 528 ~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~--~ 605 (1495)
T PLN03232 528 FILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ--N 605 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--c
Confidence 111110 0222 223344455566777778889999999999999999876542111 1
Q ss_pred CCCCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC
Q 000553 1182 LSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT 1260 (1428)
Q Consensus 1182 ~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i 1260 (1428)
+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 606 ~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--------- 675 (1495)
T PLN03232 606 P-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--------- 675 (1495)
T ss_pred C-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---------
Confidence 1 111234679999999999753 46799999999999999999999999999999999999999999773
Q ss_pred ChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHH
Q 000553 1261 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1261 ~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
.+|++|+||||+|++|+|||||||.++.++++++++++++.|++.+.++.+ |+||.+||+|.+||||||||+|||
T Consensus 676 ---~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLA 752 (1495)
T PLN03232 676 ---VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMA 752 (1495)
T ss_pred ---EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHH
Confidence 368899999999999999999999998888999999999999999999988 999999999999999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~I-q~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+++|.|+|+||+++ ++
T Consensus 753 RAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~ 831 (1495)
T PLN03232 753 RAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GS 831 (1495)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-ch
Confidence 999999999999999999999999876 5567766789999999999999999999999999999999999999975 56
Q ss_pred HHHHHHHhh
Q 000553 1418 VFSSFVRAS 1426 (1428)
Q Consensus 1418 ~f~~l~~~~ 1426 (1428)
.|+++++..
T Consensus 832 ~~~~l~~~~ 840 (1495)
T PLN03232 832 LFKKLMENA 840 (1495)
T ss_pred hHHHHHHhc
Confidence 899988654
No 80
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.8e-60 Score=647.81 Aligned_cols=445 Identities=20% Similarity=0.236 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Q 000553 964 AFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL 1043 (1428)
Q Consensus 964 ~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~ 1043 (1428)
...+.+....+...+++++++.|..+++..++|+++|++++|++.++.... .+..++...+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777788899999999999999999999999999999999998764 3444444444444333333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000553 1044 LLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS- 1122 (1428)
Q Consensus 1044 ~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~- 1122 (1428)
+.++++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+.........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222333333333333344444444556667789999999999999999999999998776654433322111111
Q ss_pred ----H-----------HHHHHH------HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccccc
Q 000553 1123 ----L-----------WLSLRL------QVGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1178 (1428)
Q Consensus 1123 ----~-----------wl~~~l------~~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~ 1178 (1428)
. +++..+ .+|. ++++...+...+..+...+..+..+.+|.+|+.++++.+++....
T Consensus 525 ~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~ 604 (1622)
T PLN03130 525 FNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLP 604 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 1 111110 1222 222333444556677778888999999999999999765432111
Q ss_pred CCCCCCCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC-ceEEECCee
Q 000553 1179 YQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQILVDGLN 1256 (1428)
Q Consensus 1179 ~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~-G~I~IDG~d 1256 (1428)
. ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|.+
T Consensus 605 -~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l---- 677 (1622)
T PLN03130 605 -N-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI---- 677 (1622)
T ss_pred -C-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE----
Confidence 1 11 11234579999999999753 3579999999999999999999999999999999999999999 99974
Q ss_pred CCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHH
Q 000553 1257 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1257 i~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQr 1334 (1428)
|++|+||||+|++|+|||||||.++.++++++++++++.|++.+.++.+ |++|.+||+|.+||||||||
T Consensus 678 ---------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQR 748 (1622)
T PLN03130 678 ---------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQR 748 (1622)
T ss_pred ---------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHH
Confidence 7799999999999999999999999888999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~I-q~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|+||++
T Consensus 749 IaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~ 828 (1622)
T PLN03130 749 VSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSN 828 (1622)
T ss_pred HHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999866 667877778999999999999999999999999999999999999997
Q ss_pred cCCcHHHHHHHhh
Q 000553 1414 DECSVFSSFVRAS 1426 (1428)
Q Consensus 1414 ~~~s~f~~l~~~~ 1426 (1428)
+ ++.|+++++..
T Consensus 829 ~-~~~~~~l~~~~ 840 (1622)
T PLN03130 829 N-GPLFQKLMENA 840 (1622)
T ss_pred c-chhHHHHHHhc
Confidence 5 56899988754
No 81
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-60 Score=605.35 Aligned_cols=469 Identities=20% Similarity=0.320 Sum_probs=322.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--cEEEEcCCCCC
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 683 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--~i~y~~Q~p~l 683 (1428)
+.++|++++|.. +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++..
T Consensus 2 i~i~nls~~~g~------~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~ 75 (638)
T PRK10636 2 IVFSSLQIRRGV------RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPA 75 (638)
T ss_pred EEEEEEEEEeCC------ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCC
Confidence 578999999853 2359999999999999999999999999999999999999999999986 48999997644
Q ss_pred CcccHHHHHhcCCC-C---------------------------------ChHHHHHHHHHhcchHHHhcccCCCcccccC
Q 000553 684 LSGTIRDNILFGKN-Y---------------------------------DPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1428)
Q Consensus 684 ~~~ti~~nI~~g~~-~---------------------------------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~ 729 (1428)
+..|+.+.+.-+.. + .+.+.+++++.+++.. .....
T Consensus 76 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~----------~~~~~ 145 (638)
T PRK10636 76 LPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSN----------EQLER 145 (638)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCc----------hhhcC
Confidence 44566665532100 0 0111222222222211 11234
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeC
Q 000553 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK 808 (1428)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~ 808 (1428)
...+|||||||||+|||||..+|++|||||||++||+.+..++.+. +.. .+.|+|+|||+++++.. ||+|++|++
T Consensus 146 ~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~-L~~---~~~tviivsHd~~~l~~~~d~i~~L~~ 221 (638)
T PRK10636 146 PVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKW-LKS---YQGTLILISHDRDFLDPIVDKIIHIEQ 221 (638)
T ss_pred chhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHH-HHh---CCCeEEEEeCCHHHHHHhcCEEEEEeC
Confidence 5568999999999999999999999999999999999999998776 322 25799999999999875 999999999
Q ss_pred CeEE-EecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHH
Q 000553 809 GQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELT 887 (1428)
Q Consensus 809 G~i~-~~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 887 (1428)
|++. ..|+|++....... ... . ... ..+..+.+.++. .
T Consensus 222 G~i~~~~g~~~~~~~~~~~----------~~~--~---------~~~---------------~~~~~~~~~~~~-----~ 260 (638)
T PRK10636 222 QSLFEYTGNYSSFEVQRAT----------RLA--Q---------QQA---------------MYESQQERVAHL-----Q 260 (638)
T ss_pred CEEEEecCCHHHHHHHHHH----------HHH--H---------HHH---------------HHHHHHHHHHHH-----H
Confidence 9996 46777765421000 000 0 000 000000000000 0
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1428)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1428)
-|+..+-.
T Consensus 261 --------------------------------~~i~r~~~---------------------------------------- 268 (638)
T PRK10636 261 --------------------------------SYIDRFRA---------------------------------------- 268 (638)
T ss_pred --------------------------------HHHHHhhh----------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000553 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1428)
Q Consensus 968 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1428)
+
T Consensus 269 -~------------------------------------------------------------------------------ 269 (638)
T PRK10636 269 -K------------------------------------------------------------------------------ 269 (638)
T ss_pred -h------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1428)
Q Consensus 1048 ~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 1127 (1428)
.+..++.
T Consensus 270 ------------a~~~~~a------------------------------------------------------------- 276 (638)
T PRK10636 270 ------------ATKAKQA------------------------------------------------------------- 276 (638)
T ss_pred ------------hhhHHHH-------------------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-c-cccCCCCCCCCCCCccEEEEEEEEEECCCC
Q 000553 1128 RLQVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE-E-LCGYQSLSPDWPFQGLIEFQNVTMRYKPSL 1205 (1428)
Q Consensus 1128 ~l~~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e-~-~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~ 1205 (1428)
+......+|+.. .. +++ . .....-+++.-+.+..|+++||+++|++
T Consensus 277 ----------------------------~~r~~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~-- 324 (638)
T PRK10636 277 ----------------------------QSRIKMLERMEL-IA-PAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGD-- 324 (638)
T ss_pred ----------------------------HHHHHHHHHhhc-cc-ccccCCceeEecCCCccCCCceEEEEeeEEEeCC--
Confidence 000000111111 00 110 0 0000001111112336999999999964
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc--cccC-Cc
Q 000553 1206 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP--FLFE-GS 1282 (1428)
Q Consensus 1206 ~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp--~lf~-gT 1282 (1428)
.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .+++|+||++ .+.. .|
T Consensus 325 ~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~igy~~Q~~~~~l~~~~~ 393 (638)
T PRK10636 325 RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLGYFAQHQLEFLRADES 393 (638)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEEEecCcchhhCCccch
Confidence 46999999999999999999999999999999999999999999999741 2699999985 3443 37
Q ss_pred HHHhcCcCC-CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHH
Q 000553 1283 LRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1360 (1428)
Q Consensus 1283 IR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~ 1360 (1428)
+.+++.... ...++++. +.+..+|+.. ........||||||||++||||++++|++|||||||++||..
T Consensus 394 ~~~~~~~~~~~~~~~~~~---------~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~ 464 (638)
T PRK10636 394 PLQHLARLAPQELEQKLR---------DYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLD 464 (638)
T ss_pred HHHHHHHhCchhhHHHHH---------HHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 887763211 11122233 3344445542 345556689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEE-EecChhHHhc
Q 000553 1361 TASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLLQ 1413 (1428)
Q Consensus 1361 te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~g~p~eLl~ 1413 (1428)
+...+.+.|++. . .|||+|||+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 465 ~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 465 MRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred HHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 999999999876 4 599999999999976 8999999999998 6799988743
No 82
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-59 Score=589.19 Aligned_cols=446 Identities=19% Similarity=0.250 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHh
Q 000553 952 NSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIA 1031 (1428)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~ 1031 (1428)
..++.++..++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++..++.+++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~ 139 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSA 139 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 344566777788888999999999999999999999999999999999999999999987554 4555666677777777
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcH---HHHHHHHHHHH
Q 000553 1032 VVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHV 1108 (1428)
Q Consensus 1032 ~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e---~~~~~~~~~~~ 1108 (1428)
+++++.+|.++++++..+.+...+..+..+..+...+...+..+.+.+++.|.++|+.+++ ++.+ +.+.+++.+..
T Consensus 140 ~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~ 218 (547)
T PRK10522 140 AYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDA 218 (547)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHH
Confidence 7777778877665554444333333333333333333334556778899999999999996 5443 45666776666
Q ss_pred HHHHHHHHHHH----HHHHH--------------HHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1109 VLYQRTSYSEL----TASLW--------------LSLRLQ---VGL---ALSYAAPIVSLLGNFLSSFTETEKEMVSLER 1164 (1428)
Q Consensus 1109 ~~~~~~~~~~~----~~~~w--------------l~~~l~---~gl---~l~~~~~~~~~l~~~i~~~~~~e~~~~sveR 1164 (1428)
+...+..+... ....+ ++.... .+. ...+...+...+..+...+.++.....+.+|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~r 298 (547)
T PRK10522 219 QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNK 298 (547)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55543322211 11111 110000 011 1112223445677788888899999999999
Q ss_pred HHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC
Q 000553 1165 VLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP 1244 (1428)
Q Consensus 1165 i~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~ 1244 (1428)
+.++.+.++|+......+ -|..+.|+|+||+|+|+++ +++|+|+||+|+|||++||+|+||||||||+++|+|+++
T Consensus 299 i~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 299 LNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred HHHHhccccccccccccc---cCcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 999976554322111111 1223679999999999743 569999999999999999999999999999999999999
Q ss_pred CCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhc--
Q 000553 1245 ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKE-- 1322 (1428)
Q Consensus 1245 ~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e-- 1322 (1428)
|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+. .++
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~ 444 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE-------LEDGR 444 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-------ccccC
Confidence 999999999999999999999999999999999999999999 23456778888887776654432 222
Q ss_pred -CCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeC
Q 000553 1323 -SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH 1399 (1428)
Q Consensus 1323 -~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1399 (1428)
+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||+|++|++
T Consensus 445 ~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 445 ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 378999999999999999999999999999999999999999999987654 48999999999999999999999999
Q ss_pred CeEEEe-cChhHHhc
Q 000553 1400 GHLVEQ-GNPQTLLQ 1413 (1428)
Q Consensus 1400 G~ive~-g~p~eLl~ 1413 (1428)
|+++|. |++.+-+.
T Consensus 525 G~i~e~~~~~~~~~~ 539 (547)
T PRK10522 525 GQLSELTGEERDAAS 539 (547)
T ss_pred CEEEEecCCchhhhh
Confidence 999987 55554443
No 83
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.8e-58 Score=632.12 Aligned_cols=545 Identities=19% Similarity=0.179 Sum_probs=397.9
Q ss_pred chHHHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 268 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 345 (1428)
Q Consensus 268 ~l~~~l~~~~~~~~~~-~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 345 (1428)
+.++..+++.++.... .+++.++..++....|+.++...+.-. +.......+. .+.++++.++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555443322 233444555666778888876654221 1111111221 122333333334433334445556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000553 346 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 424 (1428)
Q Consensus 346 ~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g 424 (1428)
.+.+.-..+...+|+|.++.+...++..+.|+++|.++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888888889999999999999999999999999999999988654 344555566665555444433333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1428)
Q Consensus 425 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1428)
++++++...+..+..+..+..++...+.++...+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333334444444455555566667777899999999999999999999988887766554444433322223332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000553 505 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1428)
Q Consensus 505 ~~~~~~~~~~~~~~~f~~y~~-~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1428)
.........+ .++..+.+.+ ..+.++++.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1122233333 3467999999999999999999999999999999999999999999997654322100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC
Q 000553 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1428)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~ 663 (1428)
. ...++. .-+..+.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~-------~wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS-------GWPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC-------CCCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000100 002346799999999997542 2359999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCC
Q 000553 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1428)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~ 730 (1428)
++|+|.++| +|+||||+|.+|+|||||||....+++++...++++.|++++.+..+|+|.+|.+||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999987 5999999999999999999983336888899999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 731 g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. +.. ..+++|+|+|+||++.+..||+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999887776 443 567899999999999999999999999999
Q ss_pred EEEecChHHHHhccccCc
Q 000553 811 VKWIGSSADLAVSLYSGF 828 (1428)
Q Consensus 811 i~~~g~~~el~~~~~~~~ 828 (1428)
|+|.|+|+||+++.+.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654433
No 84
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-58 Score=532.53 Aligned_cols=511 Identities=24% Similarity=0.302 Sum_probs=407.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000553 289 VVNDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 364 (1428)
Q Consensus 289 l~~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~ 364 (1428)
+..-.+....|++++.+++.+.+ ..+ .......+.+++++.++.+++.-........+..++-......+|++.+.
T Consensus 40 ~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ 119 (591)
T KOG0057|consen 40 LGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMS 119 (591)
T ss_pred HhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33356677899999999999864 222 22334566677777788888877777777888888888888999999999
Q ss_pred CCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000553 365 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI-LLIPVNKWIANLI 442 (1428)
Q Consensus 365 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~-~~~~~~~~~~~~~ 442 (1428)
++.+...+..+|++.+.|.--...|..... .+..+....+++.++...+++..|.+..+...+.+ ........+..+-
T Consensus 120 ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~R 199 (591)
T KOG0057|consen 120 LDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWR 199 (591)
T ss_pred hhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHH
Confidence 999988888999999999888888887654 45666777888999888999999987655443333 3334455566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000553 443 ANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTR-SSEVKHLSTRKYLDAWCVFFWATTPTLF-SLFTF 520 (1428)
Q Consensus 443 ~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R-~~El~~~~~~~~~~~~~~~~~~~~~~~~-~~~~f 520 (1428)
.+.+++++++.++..+..-+.|.|-.+||.|+-|+...++....- +.|-...+..+ ..++.++. ...+. ...++
T Consensus 200 n~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~-sl~~lnfg---Q~~iFsv~~~~ 275 (591)
T KOG0057|consen 200 NRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSS-SLAFLNFG---QKAIFSVALTF 275 (591)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHh-HHHHHHHH---HHHHHHHHHHH
Confidence 788999999999999999999999999999999999888876653 22322222221 12222222 11111 22333
Q ss_pred HHHH----HhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCC
Q 000553 521 GLFA----LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGL 596 (1428)
Q Consensus 521 ~~y~----~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~ 596 (1428)
..|. +.++.+|.+...-..+++..|..|+..|...+..+.++..-++-....++.++ + . +....|.
T Consensus 276 im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~-i-~~~~~~i------ 345 (591)
T KOG0057|consen 276 IMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D-I-QEAALPI------ 345 (591)
T ss_pred HHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h-h-hhccCCc------
Confidence 3333 44568999999999999999999999999999999888877765543332111 1 1 1000111
Q ss_pred ccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----
Q 000553 597 SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---- 672 (1428)
Q Consensus 597 ~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---- 672 (1428)
...+..|+|+|++|+|.++ +++|+++||+|++||.+||+|+|||||||++++|+++++ ++|+|.++|
T Consensus 346 ---~~~~~~I~F~dV~f~y~~k-----~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik 416 (591)
T KOG0057|consen 346 ---ELFGGSIEFDDVHFSYGPK-----RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIK 416 (591)
T ss_pred ---ccCCCcEEEEeeEEEeCCC-----CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHh
Confidence 1334569999999999742 346999999999999999999999999999999999999 999999988
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCCC-ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.||||||+..|||+||.+||.+|++. .+++..++++..++++-+..+|+|++|.+||+|..|||||||||
T Consensus 417 ~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrv 496 (591)
T KOG0057|consen 417 EVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRV 496 (591)
T ss_pred hhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHH
Confidence 49999999999999999999999874 56677788888899999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+||||+.+||+|+++|||||+||.+|++.+++. +.+ ...+||+|+|-||+..++.+|+|++++||++.++|+++|++.
T Consensus 497 slaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 497 SLARAFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred HHHHHHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999999999999999998 555 678999999999999999999999999999999999999987
Q ss_pred cc
Q 000553 823 SL 824 (1428)
Q Consensus 823 ~~ 824 (1428)
..
T Consensus 575 ~s 576 (591)
T KOG0057|consen 575 PS 576 (591)
T ss_pred hh
Confidence 43
No 85
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5.5e-59 Score=593.74 Aligned_cols=203 Identities=24% Similarity=0.299 Sum_probs=165.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999964 46999999999999999999999999999999999999999999999 4332 599
Q ss_pred EEeCCc-cccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSP-FLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp-~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
|++|++ .+++. ||++|+..... ....... ..+.+.+..+|+.. ........||||||||++||||++.+|+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~ 460 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRP-----RHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSN 460 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchH-----HHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCC
Confidence 999986 46655 99999964321 1100000 01223344445532 3445556899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe-CCeEEEe-cChhHHhc
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLVEQ-GNPQTLLQ 1413 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-~G~ive~-g~p~eLl~ 1413 (1428)
+|||||||++||..+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 461 lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 461 LLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999875 5699999999999876 89999998 8999875 78888754
No 86
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.6e-58 Score=621.36 Aligned_cols=211 Identities=20% Similarity=0.299 Sum_probs=172.7
Q ss_pred cEEEEEEEEEECC-----------CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCceEEECCeeC
Q 000553 1191 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1257 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~-----------~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~--~~G~I~IDG~di 1257 (1428)
.+.|+||++.++. +...+|+|||++|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998752 123699999999999999999999999999999999999873 689999999886
Q ss_pred CCCChHhHhcceEEEeCCccccCC-cHHHhcCcCC------CCChHH----HHHHHHHccHHHHHHhCCCchhhhcCC-C
Q 000553 1258 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESG-I 1325 (1428)
Q Consensus 1258 ~~i~~~~lR~~i~~VpQdp~lf~g-TIR~NLdp~~------~~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G-~ 1325 (1428)
. ....|+.++||+|++.+++. ||+|||.+.. ..++++ +.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 24567889999999988765 9999996421 122222 3344555544332 255565433 4
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-h-hhcCEEEEEeC-Ce
Q 000553 1326 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GH 1401 (1428)
Q Consensus 1326 ~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~-G~ 1401 (1428)
.||||||||++|||+|+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 799999999999999999999999999999999999999999998864 48999999999984 4 56899999996 89
Q ss_pred EEEecChh
Q 000553 1402 LVEQGNPQ 1409 (1428)
Q Consensus 1402 ive~g~p~ 1409 (1428)
++++|++.
T Consensus 1099 ~v~~G~~~ 1106 (1470)
T PLN03140 1099 VIYSGPLG 1106 (1470)
T ss_pred EEEECCcc
Confidence 99999874
No 87
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.2e-57 Score=579.87 Aligned_cols=200 Identities=22% Similarity=0.330 Sum_probs=162.3
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
+..++++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.+
T Consensus 506 ~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 506 PPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred CceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 3469999999999643 4699999999999999999999999999999999999999999999875 347
Q ss_pred eEEEeCCccccCCcHHHhcC-c----CCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1269 FAVVPQSPFLFEGSLRDNLD-P----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1269 i~~VpQdp~lf~gTIR~NLd-p----~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
++|+||++. ...++.+|.. . +...+++++.++|+.. |++. ........||||||||++||||++
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~---------gl~~~~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSF---------GVTGNLALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHC---------CCChHHhcCCccccCHHHHHHHHHHHHHh
Confidence 999999973 2224444421 1 1122344454444444 4542 334556789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEE-EecChhHHh
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-EQGNPQTLL 1412 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv-e~g~p~eLl 1412 (1428)
++|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999998888764 4 499999999999986 8999999999998 568887653
No 88
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-55 Score=604.59 Aligned_cols=469 Identities=18% Similarity=0.212 Sum_probs=353.9
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000553 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1428)
Q Consensus 349 ~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v 427 (1428)
+....+...+|++.++.+...++..+.|+++|.++.|++.+...+. .+..+....+.++.++.++.....+.+++.+++
T Consensus 1028 ~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~ 1107 (1560)
T PTZ00243 1028 RGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPC 1107 (1560)
T ss_pred HHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344667889999999999999999999999999999999998654 344555555555544444333322333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1428)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1428)
+++...+..++.+..+..++......+.-.+.++|.++|+++||.|+.|+.+.++..+.-+...+...+......+....
T Consensus 1108 ~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~ 1187 (1560)
T PTZ00243 1108 GYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVR 1187 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333334445555556666666777778899999999999999999999988887665444443333222222222221
Q ss_pred HHHHH--HHHHHHHHHHH--HHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCch--h
Q 000553 508 WATTP--TLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH--E 581 (1428)
Q Consensus 508 ~~~~~--~~~~~~~f~~y--~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~--~ 581 (1428)
..... ..+.++.++++ ....+.++++.+..++.+...+..|+..+...+..+.++..|++||.+|++..+.++ .
T Consensus 1188 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~ 1267 (1560)
T PTZ00243 1188 VEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPE 1267 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 11111 11112222222 222345789988888888899999999999999999999999999999996432111 0
Q ss_pred hhh-------hcCCCCc------ccCCC----ccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEc
Q 000553 582 LEQ-------AANSPSY------ISNGL----SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIG 644 (1428)
Q Consensus 582 ~~~-------~~~~~~~------~~~~~----~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG 644 (1428)
... ....+.+ ..... .......+.|+|+|++|+|+++. +++|+|+||+|++||.++|||
T Consensus 1268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaIVG 1343 (1560)
T PTZ00243 1268 LDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGIVG 1343 (1560)
T ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEEEC
Confidence 000 0000000 00000 00011245799999999997532 235999999999999999999
Q ss_pred CCCCcHHHHHHHHHcCccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhc
Q 000553 645 EVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACT 711 (1428)
Q Consensus 645 ~~GsGKStll~~llG~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~ 711 (1428)
++|||||||+++|+|.++|++|+|.++| .|+|+||+|.||+|||||||..+.++++++..++++.|+
T Consensus 1344 rTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~ 1423 (1560)
T PTZ00243 1344 RTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVG 1423 (1560)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCC
Confidence 9999999999999999999999999987 599999999999999999998877889999999999999
Q ss_pred chHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC-CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEE
Q 000553 712 LDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILC 790 (1428)
Q Consensus 712 l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~-~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilv 790 (1428)
+++.+..+|+|.+|.+||+|.+|||||||||+||||++++ |+|||||||||+||+++.+.|.+. +.. ..+++|+|+|
T Consensus 1424 l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI~I 1501 (1560)
T PTZ00243 1424 LRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVITI 1501 (1560)
T ss_pred ChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEEEE
Confidence 9999999999999999999999999999999999999996 899999999999999999988776 443 4578999999
Q ss_pred ccCcchhhcCCEEEEEeCCeEEEecChHHHHhc
Q 000553 791 THNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 791 th~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
+||++.+..||+|++|++|+|++.|+++|++++
T Consensus 1502 AHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~ 1534 (1560)
T PTZ00243 1502 AHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN 1534 (1560)
T ss_pred eccHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999864
No 89
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-55 Score=509.76 Aligned_cols=487 Identities=21% Similarity=0.271 Sum_probs=365.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000553 322 AIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS 401 (1428)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~ 401 (1428)
+++.=+..+..++..+.-.........++-+.+...+|+|....+......+..|++.|.+..|++.+++...-+..-|.
T Consensus 61 ~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~ 140 (573)
T COG4987 61 SAGVRGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAV 140 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHH
Confidence 33444556677776665566677788899999999999999999988888889999999999999999997654433332
Q ss_pred H--HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHH
Q 000553 402 L--PFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIF 479 (1428)
Q Consensus 402 ~--p~~i~i~~~lL~~~lg~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~ 479 (1428)
. .+.+++.+.+-+..++.+.+.++...++...+...+.+.-++..++..+.+..--+.+.+.+.|..-.+++|-++.+
T Consensus 141 ~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~ 220 (573)
T COG4987 141 VALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAY 220 (573)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHH
Confidence 2 22233333344566777777776655555555555666666666666666777778889999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCCCCc-HhHHHHHHHHHHHHHHHHHHHHHH
Q 000553 480 SSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNSFPWV 555 (1428)
Q Consensus 480 ~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~---~~~~f~~y~~~~~~Lt-~~~~ft~l~l~~~l~~pl~~l~~~ 555 (1428)
.+.+.+.-..=.+.-+|...+..+..++..+...+. .+++++.-.-.| ..+ +..+...+..|..+..-....|.+
T Consensus 221 ~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G-~~~~~~aa~~ll~~f~~~eaf~~L~~~A 299 (573)
T COG4987 221 RTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAG-ALAQPGAALALLVIFAALEAFEPLAPGA 299 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC-CcchhHHHHHHHHHHHHHHHHhhhcchh
Confidence 887765432222222333333333333322221111 112222111122 343 333333333343333211222367
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEec
Q 000553 556 INGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLP 635 (1428)
Q Consensus 556 i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~ 635 (1428)
+..+.+...|.+|+.+.++.++..... . ... ...+..++++|++|+|+..+ .++|+|+||+++
T Consensus 300 ~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~ 362 (573)
T COG4987 300 FQHLGQVIASARRLNDILDQKPEVTFP-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLA 362 (573)
T ss_pred HHHhhHHHHHHHHHhhhccCCcccCCC-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeec
Confidence 788889999999999998765432211 0 001 11222789999999998642 345999999999
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCC-ChH
Q 000553 636 KGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQ 701 (1428)
Q Consensus 636 ~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~ 701 (1428)
+||.++|+|++|||||||++.|.|.++|++|+|..+| .|++++|.+.+|++|+|||+..+++. ++|
T Consensus 363 ~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDE 442 (573)
T COG4987 363 QGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDE 442 (573)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHH
Confidence 9999999999999999999999999999999999987 58999999999999999999999874 678
Q ss_pred HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc
Q 000553 702 SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH 781 (1428)
Q Consensus 702 ~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~ 781 (1428)
...++++..+|++-++..|+|.+|.+||+|..||||||||++|||++.+|++++||||||.+||+.|++++++. +.. .
T Consensus 443 el~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~ 520 (573)
T COG4987 443 ELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-H 520 (573)
T ss_pred HHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-H
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999997 443 6
Q ss_pred cCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCc
Q 000553 782 MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 828 (1428)
Q Consensus 782 ~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~ 828 (1428)
.+|||+|+|||++..++.+|+|++|++|+++++|+|.+++.+++.+.
T Consensus 521 ~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~~g~~~ 567 (573)
T COG4987 521 AEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLANNGRYK 567 (573)
T ss_pred hcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhccccHHH
Confidence 77999999999999999999999999999999999999987665543
No 90
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.2e-57 Score=551.09 Aligned_cols=484 Identities=23% Similarity=0.310 Sum_probs=338.4
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--cEEEEcCCCC
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--~i~y~~Q~p~ 682 (1428)
.+.++|++.++.. +.+|+|+||++.+|+.++|||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4788899999843 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCcc-cHHHHHhcCCCCC---hHHHHHHH---------------------HHhcchHHHhcccCC--CcccccCCCCccc
Q 000553 683 ILSG-TIRDNILFGKNYD---PQSYSETL---------------------KACTLDVDISLMVGG--DMAYIGEKGVNLS 735 (1428)
Q Consensus 683 l~~~-ti~~nI~~g~~~~---~~~~~~v~---------------------~~c~l~~di~~l~~g--d~t~ig~~g~~LS 735 (1428)
.... ||+|.+..|...- ..+|+.+. +...++.+++..-.| .... .....+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9865 9999998774210 01111111 111222233222222 1111 34556899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEE-E
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 813 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~-~ 813 (1428)
||||.||+|||||..+||+|||||||++||..+.+|+-+.+. ..+| |+|+||||.+||+. |++|+.++.|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~---~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLK---RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHH---hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 999999999999999999999999999999999999988732 2345 99999999999997 9999999999775 5
Q ss_pred ecChHHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHH
Q 000553 814 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 893 (1428)
Q Consensus 814 ~g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 893 (1428)
.|.|+...+..... . .. +. ...+..+++.++
T Consensus 232 ~Gny~~~~~~r~~~----------~---~~----------------~~-------~~~~~~~~~~~~------------- 262 (530)
T COG0488 232 KGNYSSYLEQKAER----------L---RQ----------------EA-------AAYEKQQKELAK------------- 262 (530)
T ss_pred cCCHHHHHHHHHHH----------H---HH----------------HH-------HHHHHHHHHHHH-------------
Confidence 67777665321000 0 00 00 000000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 894 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 973 (1428)
Q Consensus 894 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1428)
+..|++.
T Consensus 263 ----------------------------~~~~i~r--------------------------------------------- 269 (530)
T COG0488 263 ----------------------------EQEWIRR--------------------------------------------- 269 (530)
T ss_pred ----------------------------HHHHHHH---------------------------------------------
Confidence 0001100
Q ss_pred HHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000553 974 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1053 (1428)
Q Consensus 974 lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~ 1053 (1428)
+.
T Consensus 270 ----------------------------~~-------------------------------------------------- 271 (530)
T COG0488 270 ----------------------------GK-------------------------------------------------- 271 (530)
T ss_pred ----------------------------HH--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1054 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGL 1133 (1428)
Q Consensus 1054 ~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl 1133 (1428)
....++++.
T Consensus 272 ----~~~~~~k~a------------------------------------------------------------------- 280 (530)
T COG0488 272 ----AAASKAKKA------------------------------------------------------------------- 280 (530)
T ss_pred ----hccchHHHH-------------------------------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCccccccC--CCCCCC-CCCCccEEEEEEEEEECCCCCcc
Q 000553 1134 ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY--MDVPQEELCGY--QSLSPD-WPFQGLIEFQNVTMRYKPSLPAA 1208 (1428)
Q Consensus 1134 ~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~--~~~~~e~~~~~--~~~~~~-wp~~g~I~f~nvs~~Y~~~~~~v 1208 (1428)
+......+|+.+- ...|.+..... ..+++. -+.+-.++++|+++.|+++ +++
T Consensus 281 ----------------------~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l 337 (530)
T COG0488 281 ----------------------KSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLL 337 (530)
T ss_pred ----------------------HHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC-cee
Confidence 0001111222211 00111100000 011111 1224479999999999765 679
Q ss_pred ceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc-cccC-CcHHHh
Q 000553 1209 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP-FLFE-GSLRDN 1286 (1428)
Q Consensus 1209 L~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp-~lf~-gTIR~N 1286 (1428)
++++||.|.+|++|||+||||+|||||+++|.|...|.+|+|.+.- .-++||.+|+- .+++ .|+-++
T Consensus 338 ~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~ 406 (530)
T COG0488 338 LKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE-----------TVKIGYFDQHRDELDPDKTVLEE 406 (530)
T ss_pred ecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC-----------ceEEEEEEehhhhcCccCcHHHH
Confidence 9999999999999999999999999999999999999999998753 12699999998 3443 388888
Q ss_pred cCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHH
Q 000553 1287 LDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASIL 1365 (1428)
Q Consensus 1287 Ldp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~I 1365 (1428)
+..... ..+.++...|.+.++... .+......||||||-|+.||+.++.+|++|||||||++||.+|.+.+
T Consensus 407 l~~~~~~~~e~~~r~~L~~f~F~~~--------~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aL 478 (530)
T COG0488 407 LSEGFPDGDEQEVRAYLGRFGFTGE--------DQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEAL 478 (530)
T ss_pred HHhhCccccHHHHHHHHHHcCCChH--------HHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHH
Confidence 865432 235666666666554321 12233447999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEe-cChhHHhccC
Q 000553 1366 QNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNPQTLLQDE 1415 (1428)
Q Consensus 1366 q~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~-g~p~eLl~~~ 1415 (1428)
.++|.++ +-|||+|+|+.+.+.. |++|+++++ ++.++ |.+++..+..
T Consensus 479 e~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~ 527 (530)
T COG0488 479 EEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQK 527 (530)
T ss_pred HHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhh
Confidence 9999864 4599999999999987 799999999 88887 8998887643
No 91
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.5e-55 Score=549.69 Aligned_cols=521 Identities=15% Similarity=0.113 Sum_probs=373.5
Q ss_pred HHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 273 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1428)
Q Consensus 273 l~~-~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir 351 (1428)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+ + +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLF-S---FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 111111 1 112233334455556666788889999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHH
Q 000553 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYL-LYTQVKFAFVSGLAITIL 430 (1428)
Q Consensus 352 ~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~l-L~~~lg~a~l~g~~v~~~ 430 (1428)
..+...+|+|.++++...+.+.++|++++.++.|++.+......+..+....+.+++++.+ ++....++.+ .++++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~~~ 164 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAIII 164 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 9999999999999999888888999999999999999998765555555444444333332 2222222222 2222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 431 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1428)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1428)
.+.+..+..++.++..++..+..++..+.+.|.+.|+++||.++.++ ...+++.+.-++-.+...+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334445566667777788888899999999999999999999854 3333333322111111111111111111111
Q ss_pred HHHHHHHHHHHHHHHHH---hCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhh
Q 000553 509 ATTPTLFSLFTFGLFAL---MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1428)
Q Consensus 509 ~~~~~~~~~~~f~~y~~---~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 585 (1428)
... ..+.++.+.+ ..+.++.+.+++++.+...+..|+..+...++.+.++.+|.+||.++++.++.++.....
T Consensus 245 ~~~----~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~ 320 (555)
T TIGR01194 245 QLL----FFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELEL 320 (555)
T ss_pred HHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 111 1111111111 125799999999999999999999999999999999999999999998642211100000
Q ss_pred cCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC
Q 000553 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1428)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~ 665 (1428)
..... ............++++|++|+|+..+. ..+++|+|+||++++|++++|+||||||||||+++|+|+++|++
T Consensus 321 ~~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~ 396 (555)
T TIGR01194 321 SDADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQE 396 (555)
T ss_pred ccccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 00000 000000012356999999999975311 11246999999999999999999999999999999999999999
Q ss_pred eEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 666 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 666 G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
|+|.++| .++|++|+|++|++|+++|+ ..+.++++..++++.++++++++.+|+|++|. .
T Consensus 397 G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~ 469 (555)
T TIGR01194 397 GEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----T 469 (555)
T ss_pred cEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----c
Confidence 9999876 48999999999999999996 33456778889999999999999999999984 7
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
+||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+|||+++.+..||+|++|++|+++
T Consensus 470 ~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~ 549 (555)
T TIGR01194 470 ALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIV 549 (555)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEE
Confidence 89999999999999999999999999999999999999988764322123579999999999999999999999999998
Q ss_pred Ee
Q 000553 813 WI 814 (1428)
Q Consensus 813 ~~ 814 (1428)
+.
T Consensus 550 ~~ 551 (555)
T TIGR01194 550 KD 551 (555)
T ss_pred Ee
Confidence 64
No 92
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=4e-57 Score=566.15 Aligned_cols=191 Identities=21% Similarity=0.290 Sum_probs=161.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEeCCcccc-CCcHHHhcCcCC-CCC-hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1271 VVPQSPFLF-EGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1271 ~VpQdp~lf-~gTIR~NLdp~~-~~~-d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
|+||++.++ +.|+++|+.... ... +... .+.++.+|++.........||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~---------~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYK---------SEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHH---------HHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999998754 569999986431 111 1122 3344445666555666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||||++|++ ++...|+
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999998864 37899999999999876 899999964 8877666
No 93
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.7e-56 Score=506.91 Aligned_cols=460 Identities=22% Similarity=0.282 Sum_probs=343.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHH-HHHHHHHH
Q 000553 946 CIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI-LNILLANF 1024 (1428)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~-l~~~~~~~ 1024 (1428)
..+.++.+++..+|.+.+.+.+.+.-.+++..++...+++|..--...+....++ |++.+...+... ...++..=
T Consensus 70 l~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDaP 145 (580)
T COG4618 70 LGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDAP 145 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCCc
Confidence 3445567788889999999999999999999999999888775544444444443 555554443211 11111100
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHH
Q 000553 1025 VGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKF 1104 (1428)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~ 1104 (1428)
... ..+.+++...||+.++.+.-.++...+...-...+++--....+....-..+..-+..+.++|+|.|......+++
T Consensus 146 W~P-~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW 224 (580)
T COG4618 146 WMP-LYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRW 224 (580)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHH
Confidence 011 1122333445665554443333332222222222222222233333444567778899999999999987666665
Q ss_pred HHH----HHHHHHHHHHHH---HHHHHHHHHHH-----------------HHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 000553 1105 KEH----VVLYQRTSYSEL---TASLWLSLRLQ-----------------VGLALSYAAP---IVSLLGNFLSSFTETEK 1157 (1428)
Q Consensus 1105 ~~~----~~~~~~~~~~~~---~~~~wl~~~l~-----------------~gl~l~~~~~---~~~~l~~~i~~~~~~e~ 1157 (1428)
.+. ++...++..... ...+-+-..++ .|..+.-.+. ....+-..+..|.+...
T Consensus 225 ~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~ 304 (580)
T COG4618 225 GRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVA 304 (580)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHH
Confidence 544 333333332221 22233322233 2222222222 12345678999999999
Q ss_pred HHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHH
Q 000553 1158 EMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN 1237 (1428)
Q Consensus 1158 ~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~ 1237 (1428)
+..|..|+.++++..++.... ...|. .+|.+.++++++.=|+..+++|+|+||+++|||-+||+||||||||||.+
T Consensus 305 Ar~s~~Rl~~lL~~~p~~~~~-m~LP~---P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR 380 (580)
T COG4618 305 ARQSYKRLNELLAELPAAAER-MPLPA---PQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLAR 380 (580)
T ss_pred HHHHHHHHHHHHHhCccccCC-CCCCC---CCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHH
Confidence 999999999999766554221 11111 36899999999976666679999999999999999999999999999999
Q ss_pred HHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--
Q 000553 1238 ALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV-- 1314 (1428)
Q Consensus 1238 ~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l-- 1314 (1428)
+|.|..+|.+|.|.+||-|+++++.+++-++|||.|||-.||+|||+|||.-|+ +.+++.|.+|.+.++.+|.|-.+
T Consensus 381 ~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~ 460 (580)
T COG4618 381 LLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQ 460 (580)
T ss_pred HHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcC
Confidence 999999999999999999999999999999999999999999999999997766 66778899999999999999999
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCE
Q 000553 1315 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDE 1393 (1428)
Q Consensus 1315 gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~Dr 1393 (1428)
||||.+||+|..||||||||++||||+..+|++++||||.||||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|+
T Consensus 461 GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dk 540 (580)
T COG4618 461 GYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDK 540 (580)
T ss_pred CccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcce
Confidence 99999999999999999999999999999999999999999999999999999987664 69999999999999999999
Q ss_pred EEEEeCCeEEEecChhHHhcc
Q 000553 1394 ILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1394 I~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|+||++|++..+|+-+|.+++
T Consensus 541 ilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 541 ILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred eeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999874
No 94
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-56 Score=502.20 Aligned_cols=515 Identities=23% Similarity=0.304 Sum_probs=380.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 286 LLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLA---IALGLTS---ILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1428)
Q Consensus 286 l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~ir~~L~~~Iy 359 (1428)
++.++.-++...-|.+.+.+++.+.. +...-+.+. +.+.+.+ .+..++.+...+...++..-..-.+...+|
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~lta--p~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lf 299 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTA--PDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELF 299 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcC--cchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHH
Confidence 34444556677789999999888763 222222222 2222222 122455555666555666556667788899
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHHHHHH
Q 000553 360 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI---LLIPVNK 436 (1428)
Q Consensus 360 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v~~---~~~~~~~ 436 (1428)
+|...++...--...+|++...|..-++.+...-..+..+-...+.+++++. |..+..-...|+++++ +...+..
T Consensus 300 rHlh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~v--YF~~~Fn~wFgLIVfl~m~lY~~~Ti 377 (790)
T KOG0056|consen 300 RHLHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMV--YFFIKFNIWFGLIVFLMMLLYCYVTI 377 (790)
T ss_pred HHHHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhh--hhhhhHhHHHHHHHHHHHHHHhheee
Confidence 9999988766555678999999877766665332333333334444554443 3333333444444333 2222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 437 WIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSW----LMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1428)
Q Consensus 437 ~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~----i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1428)
.+...-.+++++++..-.+--..-.+.|-|-.+||.|+.|+...++ |.+..++|-+.+.....+....+.+....
T Consensus 378 ~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg- 456 (790)
T KOG0056|consen 378 KITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG- 456 (790)
T ss_pred eeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH-
Confidence 3444445667776666556566677888999999999998765554 44444555554443333332222221111
Q ss_pred HHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcc
Q 000553 513 TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYI 592 (1428)
Q Consensus 513 ~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~ 592 (1428)
+....-+.+|.+..+.+|.|...-.+.++-.+..|++.+......+....+-++|+.+.++.++...+.. +.++
T Consensus 457 -ll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P---~a~p-- 530 (790)
T KOG0056|consen 457 -LLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP---GAPP-- 530 (790)
T ss_pred -HhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC---CCCC--
Confidence 1122234566667788999988888889999999999999999999999999999999997543221111 1111
Q ss_pred cCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC
Q 000553 593 SNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG 672 (1428)
Q Consensus 593 ~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~ 672 (1428)
.....+.|+++|++|+|+++ +| +|+||||+++||+.+++|||+|+||||+++.+.+.++..+|+|.++|
T Consensus 531 ------l~~~~G~i~fsnvtF~Y~p~--k~---vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDg 599 (790)
T KOG0056|consen 531 ------LKVTQGKIEFSNVTFAYDPG--KP---VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDG 599 (790)
T ss_pred ------ccccCCeEEEEEeEEecCCC--Cc---eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcC
Confidence 12356789999999999854 34 49999999999999999999999999999999999999999999987
Q ss_pred -------------cEEEEcCCCCCCcccHHHHHhcCCCC-ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
+||.|||+..|||+||..||.++++- ..|...++.+|.+.++.|..+|+|++|.|||+|-.||||+
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGE 679 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGE 679 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcc
Confidence 59999999999999999999999874 3455567789999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChH
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|||||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|+++++|+|+|.|+|+
T Consensus 680 KQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~He 757 (790)
T KOG0056|consen 680 KQRVAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHE 757 (790)
T ss_pred hhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHH
Confidence 9999999999999999999999999999999987654 433 67899999999999999999999999999999999999
Q ss_pred HHHhcc
Q 000553 819 DLAVSL 824 (1428)
Q Consensus 819 el~~~~ 824 (1428)
|+.+.+
T Consensus 758 eLl~rd 763 (790)
T KOG0056|consen 758 ELLKRD 763 (790)
T ss_pred HHHhcc
Confidence 998773
No 95
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-54 Score=561.16 Aligned_cols=521 Identities=23% Similarity=0.283 Sum_probs=370.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 888 VYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT-KYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 966 (1428)
Q Consensus 888 ~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 966 (1428)
..+.-++..++..+...++.. +........+..+...++....... ......|....++..++.+++.-...+.....
T Consensus 191 l~~al~~~f~~~~~~~~~~~~-~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~ 269 (1381)
T KOG0054|consen 191 LLRALLRTFGRTFLLSGIFLF-LRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRV 269 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 444444444444433333322 2233355666677666554322211 22223344444444555555555555666778
Q ss_pred HHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000553 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1428)
Q Consensus 967 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1046 (1428)
+.|.-..+-..++++.++..-.--..++.|+|+|-++.|.+.+++..+..-..+...+-.+++...+.-...+ -+++.+
T Consensus 270 g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~-sa~~G~ 348 (1381)
T KOG0054|consen 270 GMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGP-SALAGV 348 (1381)
T ss_pred hhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-HHHHHH
Confidence 8888888888999999999988888889999999999999999998876655554444333322222111111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHH----H-HHHHHH
Q 000553 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRT----S-YSELTA 1121 (1428)
Q Consensus 1047 p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~----~-~~~~~~ 1121 (1428)
.+++++.-++.+..+..+..+......+..-....+|.++|+++||.|+||+.|.++..+.-+.-.+. . +.....
T Consensus 349 ~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~ 428 (1381)
T KOG0054|consen 349 AVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNS 428 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222333333333333333334444455678999999999999999999999886654432222 2 222222
Q ss_pred HHHHH-HHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCC
Q 000553 1122 SLWLS-LRLQ--------------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1180 (1428)
Q Consensus 1122 ~~wl~-~~l~--------------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~ 1180 (1428)
..|.. -.+- +-.++++.-.+...+..+-.....+-+..+|++|+.+|+..++.+.....
T Consensus 429 ~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~ 508 (1381)
T KOG0054|consen 429 FLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVE 508 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccc
Confidence 22321 1111 01112222222233444445555666778999999999976543321111
Q ss_pred CCCCCCCCCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC
Q 000553 1181 SLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1259 (1428)
Q Consensus 1181 ~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~ 1259 (1428)
. .+.-+.+..|+++|.+|++.++ .++.|+||||+|++||.+||||++|||||||+++|+|.++..+|++.++|.
T Consensus 509 ~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gs---- 583 (1381)
T KOG0054|consen 509 R-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGS---- 583 (1381)
T ss_pred c-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCe----
Confidence 1 1222345579999999999863 445999999999999999999999999999999999999999999999883
Q ss_pred CChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHH
Q 000553 1260 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1260 i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~L 1337 (1428)
++||||.|++|+|||||||.++.+++++...++++.|+|.+.++.+ |-.|+|||+|.|||||||||++|
T Consensus 584 ---------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsL 654 (1381)
T KOG0054|consen 584 ---------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISL 654 (1381)
T ss_pred ---------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHH-HHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASI-LQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~-Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
|||++++++|.+||+|-|+||.++.+. +++.|+...+++|+|.|||.++.+..+|+|+||++|+|+|.|+|+||++. +
T Consensus 655 ARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~ 733 (1381)
T KOG0054|consen 655 ARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-G 733 (1381)
T ss_pred HHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-c
Confidence 999999999999999999999999765 56778878899999999999999999999999999999999999999974 5
Q ss_pred cHHHHHHHh
Q 000553 1417 SVFSSFVRA 1425 (1428)
Q Consensus 1417 s~f~~l~~~ 1425 (1428)
+.|.++.++
T Consensus 734 ~~~~~l~~~ 742 (1381)
T KOG0054|consen 734 GDFAELAHE 742 (1381)
T ss_pred hhHHHHhhc
Confidence 688887544
No 96
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.2e-53 Score=579.24 Aligned_cols=483 Identities=18% Similarity=0.214 Sum_probs=358.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 000553 339 YSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQV 417 (1428)
Q Consensus 339 ~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~l 417 (1428)
..+...+.+.+.-..+...++++.++.+...+...+.|+++|.++.|++.+..... .+..+....+.+++.+.++....
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777777888889999999999998889999999999999999987544 34555555555555554444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Q 000553 418 KFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTR 497 (1428)
Q Consensus 418 g~a~l~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~ 497 (1428)
++.+++.++++++++.+..+..+..+..++.....++...+...|.++|+.+||.||+|+.+.++..+.-+...+.....
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444445555555566667777888899999999999999999999999888776544322221111
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 000553 498 KYLDAWCVFFWAT-TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 576 (1428)
Q Consensus 498 ~~~~~~~~~~~~~-~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 576 (1428)
.....+....... ...++..+.+ ..+.....+++.+-.++++...+..++..+...+..+..+.+|.+||.+|++.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~ 1182 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLP 1182 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111121111111 1011111111 111112345666666677777888899988889999999999999999999765
Q ss_pred CCchhhhhhcCCC--C---cccCCCc-cCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcH
Q 000553 577 EYKHELEQAANSP--S---YISNGLS-NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1428)
Q Consensus 577 e~~~~~~~~~~~~--~---~~~~~~~-~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1428)
+..+......... . ....... ..-+..+.|+++|++|+|+++. +++|+|+||+|++||.++|||++||||
T Consensus 1183 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~----~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1183 QEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAG----RAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred CccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCC----cceeeccEEEEcCCCEEEEECCCCCCH
Confidence 4322100000000 0 0000000 0002346799999999997532 245999999999999999999999999
Q ss_pred HHHHHHHHcCccCCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHh
Q 000553 651 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDIS 717 (1428)
Q Consensus 651 Stll~~llG~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~ 717 (1428)
|||+++|+|.++ .+|+|.++| +|+|+||+|.+|+|||||||....++++++..++++.|+|.+.+.
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999997 799999987 599999999999999999998767788999999999999999999
Q ss_pred cccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh
Q 000553 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1428)
Q Consensus 718 ~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 797 (1428)
.+|+|.+|.|||+|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. +.. ..+++|+|+||||++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~-~~~~~TvI~IaHRl~ti 1415 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQ-SFSNCTVILSEHRVEAL 1415 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999988876 443 45789999999999999
Q ss_pred hcCCEEEEEeCCeEEEecChHHHHhccccCccc
Q 000553 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 830 (1428)
Q Consensus 798 ~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~ 830 (1428)
..+|+|++|++|+|++.|+++++.+..+.+.++
T Consensus 1416 ~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l 1448 (1490)
T TIGR01271 1416 LECQQFLVIEGSSVKQYDSIQKLLNETSLFKQA 1448 (1490)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHH
Confidence 999999999999999999999998755444443
No 97
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.1e-52 Score=526.96 Aligned_cols=508 Identities=17% Similarity=0.154 Sum_probs=361.7
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1428)
+++.+++.+++.++...++.++..++.++. |++.+.+++.+.. .....+.+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT--SLLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 566778888888888888888888888874 7787888876532 111111111111111 223334555666778
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000553 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1428)
Q Consensus 348 ~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~v 427 (1428)
.++...+...+|+|.++++...+.+.+.|+++|.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888899999999999999888888999999999999999988665666677777776666655544333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1428)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1428)
+++.+.+..++.++..+..++.++..+++.+.+.|.++|++++++.+ .++.+.++..+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44445566777888888888999999999999999999999997433 2234444444432221111112111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhh
Q 000553 506 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1428)
Q Consensus 506 ~~~~~~~~~~~~~~f~~y~~~~~---~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 582 (1428)
.+.. +...+.++.+.+.++ ..+.+.+.....+...+..|+..+...++.+.++..+++||.+++..++..+..
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111 111111222222221 122222222222233467899999999999999999999999998654321100
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc
Q 000553 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1428)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~ 662 (1428)
. ..+ .+....++++|++|+|+.+ + ++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 313 -~--~~~----------~~~~~~i~~~~v~f~y~~~--~---~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 313 -R--PQA----------FPDWQTLELRNVTFAYQDN--G---FSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred -c--ccc----------cCcCceEEEEEEEEEeCCC--C---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 0 000 0112469999999999732 2 35999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccC
Q 000553 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1428)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~ 729 (1428)
|++|+|.++| +++|++|+|++|++|++|| +...+++...++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 456677788888888888776652 3331 2
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEeC
Q 000553 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDK 808 (1428)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~ 808 (1428)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .... .+++|+|+|||+++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 47899999999999999999999999999999999999999888763 2212 247899999999999999999999999
Q ss_pred CeEEEe
Q 000553 809 GQVKWI 814 (1428)
Q Consensus 809 G~i~~~ 814 (1428)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999875
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-54 Score=512.04 Aligned_cols=442 Identities=25% Similarity=0.349 Sum_probs=334.3
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|++-+|+. ..+|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 46789999888863 3569999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCC-cccHHHHHhcCCCC-------ChHHH----HHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 ---SIAYVPQVPWIL-SGTIRDNILFGKNY-------DPQSY----SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~-~~ti~~nI~~g~~~-------~~~~~----~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.|+.+.|++-|+ +-||.|||.+|++. |..+. +++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 499999999876 45999999888653 32322 233333333211 23344589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecC
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 816 (1428)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++.+.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435678899999999998765 99999999999875432
Q ss_pred h-HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhh
Q 000553 817 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 895 (1428)
Q Consensus 817 ~-~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 895 (1428)
. .++. .++.. .
T Consensus 229 ~~~~~~------------------------------------------------~~~lv----------~---------- 240 (500)
T COG1129 229 TAAETS------------------------------------------------EDELV----------R---------- 240 (500)
T ss_pred cccCCC------------------------------------------------HHHHH----------H----------
Confidence 1 1100 00000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 896 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 975 (1428)
Q Consensus 896 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 975 (1428)
+.
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000553 976 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1055 (1428)
Q Consensus 976 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i 1055 (1428)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1056 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLAL 1135 (1428)
Q Consensus 1056 ~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l 1135 (1428)
|++
T Consensus 245 --------r~~--------------------------------------------------------------------- 247 (500)
T COG1129 245 --------REL--------------------------------------------------------------------- 247 (500)
T ss_pred --------cch---------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEE
Q 000553 1136 SYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFT 1215 (1428)
Q Consensus 1136 ~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~ 1215 (1428)
.+..++. +..-+....++++|++.. ..++|+||+
T Consensus 248 ---------------------------------~~~~~~~-------~~~~~~~~~l~v~~l~~~------~~~~dvSf~ 281 (500)
T COG1129 248 ---------------------------------EDLFPEP-------PEEGIGEPVLEVRNLSGG------GKVRDVSFT 281 (500)
T ss_pred ---------------------------------hhhcccc-------cccCCCCcEEEEecCCCC------CceeCceeE
Confidence 0000000 000011224677777642 258999999
Q ss_pred EeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC-hHhHhcceEEEeCCcc---cc-CCcHHHhcCcC
Q 000553 1216 IEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFAVVPQSPF---LF-EGSLRDNLDPF 1290 (1428)
Q Consensus 1216 I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~~VpQdp~---lf-~gTIR~NLdp~ 1290 (1428)
+++||.+||.|--|||+|-++.+|+|.-++.+|+|.+||.++.--+ .+..+..|+|||-|-- +| ..+|++|+...
T Consensus 282 vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~ 361 (500)
T COG1129 282 VRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLA 361 (500)
T ss_pred EeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehH
Confidence 9999999999999999999999999999999999999999886554 5688899999999873 44 55999998643
Q ss_pred C--CCChH-HHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHH
Q 000553 1291 H--MNDDL-KIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQ 1366 (1428)
Q Consensus 1291 ~--~~~d~-ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq 1366 (1428)
. .++.. -+...-++.-..++++.++..+. ....-.+||||.+|+++|||.|..+|+||||||||.++|..+.+.|.
T Consensus 362 ~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy 441 (500)
T COG1129 362 SLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIY 441 (500)
T ss_pred hhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHH
Confidence 1 11100 12233344445566666633321 11223479999999999999999999999999999999999999999
Q ss_pred HHHHHhc-CCcEEEEeccChhhhh-hcCEEEEEeCCeEEEecChhH
Q 000553 1367 NAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1367 ~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~g~p~e 1410 (1428)
+.|++.. +|.+||+|+-.+..+. .||||+||.+|+++..=+.++
T Consensus 442 ~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 442 RLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEecccc
Confidence 9999875 6899999999999988 599999999999997544443
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.8e-53 Score=540.30 Aligned_cols=484 Identities=15% Similarity=0.128 Sum_probs=365.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCcc---chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 900 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYS---TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1428)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~---~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 976 (1428)
.+++.+++.++...+....+++.+...+.....+.... ...++.+++++.++..+..++...+......+..+++|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455556666666677777766654321111000 112233334444455555556666667778888899999
Q ss_pred HHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHH
Q 000553 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKL 1055 (1428)
Q Consensus 977 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~p~~~~~~~i 1055 (1428)
+.+++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.+++.++.+.. ..|.+.++++.+.++...+
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999997 8899999999999999999999999999888888877766664 5565555444444444555
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Q 000553 1056 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLR------- 1128 (1428)
Q Consensus 1056 ~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~------- 1128 (1428)
.+++.+..+.+.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+..........++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5556665566666666677788899999999999999999999988888777766655544332222111111
Q ss_pred --------------HH----------HHH----HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccc
Q 000553 1129 --------------LQ----------VGL----ALSY---AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC 1177 (1428)
Q Consensus 1129 --------------l~----------~gl----~l~~---~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~ 1177 (1428)
+. .|. .+.| ...+...+..+...+.++....++.+|+.++.+.++|...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 011 1111 2334556677788888999999999999999976443210
Q ss_pred c-------CC-C--------C------CCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHH
Q 000553 1178 G-------YQ-S--------L------SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSI 1235 (1428)
Q Consensus 1178 ~-------~~-~--------~------~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL 1235 (1428)
. .. . + .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0 00 0 0 0001134679999999999643 469999999999999999999999999999
Q ss_pred HHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcC--------CCCChHHHHHHHHHccH
Q 000553 1236 LNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--------HMNDDLKIWSVLEKCHV 1307 (1428)
Q Consensus 1236 ~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~--------~~~~d~ei~~aL~~~~l 1307 (1428)
+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+... ...++++++++++.+++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999753 23467889999999999
Q ss_pred HHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChh
Q 000553 1308 KEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRIS 1386 (1428)
Q Consensus 1308 ~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ 1386 (1428)
.++++.- |+|+..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++. ++|+|+||||++
T Consensus 564 ~~~~~~~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~~ 640 (659)
T TIGR00954 564 THILEREGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRKS 640 (659)
T ss_pred HHHHhhcCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCchH
Confidence 9988766 9999876 45699999999999999999999999999999999999999999999874 899999999999
Q ss_pred hhhhcCEEEEEeC
Q 000553 1387 TVLNMDEILILDH 1399 (1428)
Q Consensus 1387 ti~~~DrI~Vl~~ 1399 (1428)
++..||+|++|+.
T Consensus 641 ~~~~~d~il~l~~ 653 (659)
T TIGR00954 641 LWKYHEYLLYMDG 653 (659)
T ss_pred HHHhCCEEEEEeC
Confidence 9999999999973
No 100
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.9e-52 Score=478.19 Aligned_cols=446 Identities=26% Similarity=0.374 Sum_probs=343.0
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..+++++.+-.|+. ..+++||||++++||++++.|+||+|||||++.|.|.++|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 46788998888762 3469999999999999999999999999999999999999999999988
Q ss_pred ---cEEEEcCCCCCCcc-cHHHHHhcCCCC------C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.||+|.|++-|+.. ||.|||..|.+- | .++.++..+.++|+-|.+ ++...||=|+
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999998865 999999999753 2 345566667777766543 3445899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecCh
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 817 (1428)
||||.|-+|||++|++||||||||.|-|...+++|+. +......|+|||+|||+++.+.. ||++-||+.|+++..-
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~-- 222 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTV-- 222 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeee--
Confidence 9999999999999999999999999999999999987 33325578999999999998765 9999999999975321
Q ss_pred HHHHhccccCcccccccchhhhhhhhhhcccccchhhhhhhhcccccCCCchhhHHHHHHHHhcCcchHHHHHHHHhhhh
Q 000553 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1428)
Q Consensus 818 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1428)
+... + . ..+++. +--.|
T Consensus 223 ~~~~-----------~---------------------------~-------t~~ela---~lMvG--------------- 239 (501)
T COG3845 223 DPVA-----------E---------------------------T-------TEEELA---ELMVG--------------- 239 (501)
T ss_pred cCCC-----------C---------------------------C-------CHHHHH---HHhcC---------------
Confidence 1000 0 0 000000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1428)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 977 (1428)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1428)
Q Consensus 978 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~ 1057 (1428)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQVGLALSY 1137 (1428)
Q Consensus 1058 ~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~gl~l~~ 1137 (1428)
+++
T Consensus 240 ------~~v----------------------------------------------------------------------- 242 (501)
T COG3845 240 ------REV----------------------------------------------------------------------- 242 (501)
T ss_pred ------Ccc-----------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEe
Q 000553 1138 AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIE 1217 (1428)
Q Consensus 1138 ~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~ 1217 (1428)
..+.+ .++.-|..-.++++|++..-+.+ -+.+++|||+|+
T Consensus 243 --------------------------------~~~~~-------~~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr 282 (501)
T COG3845 243 --------------------------------VLRVV-------KPPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVR 282 (501)
T ss_pred --------------------------------ccccc-------cCCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEe
Confidence 00000 01111334478999999865433 368999999999
Q ss_pred CCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeC-CCCChHhHh-cceEEEeCCcc----ccCCcHHHhcCcCC
Q 000553 1218 GGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDLR-GRFAVVPQSPF----LFEGSLRDNLDPFH 1291 (1428)
Q Consensus 1218 ~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di-~~i~~~~lR-~~i~~VpQdp~----lf~gTIR~NLdp~~ 1291 (1428)
+||.+||.|-.|-|-+-|+.+|.|+.+|.+|+|.++|.|+ ...+....| ..+++||.|.+ ..+-|+.||+-+..
T Consensus 283 ~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~ 362 (501)
T COG3845 283 AGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGR 362 (501)
T ss_pred cCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhh
Confidence 9999999999999999999999999999999999999997 566776665 46999999984 45679999985432
Q ss_pred CCCh-----H-HHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHH
Q 000553 1292 MNDD-----L-KIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASI 1364 (1428)
Q Consensus 1292 ~~~d-----~-ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~ 1364 (1428)
...+ - -=|+++++ ...+.++..+..+ .-.....+||||++|++-+||-|.++|++||..+||-+||..+.+.
T Consensus 363 ~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~ 441 (501)
T COG3845 363 HDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEF 441 (501)
T ss_pred ccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHH
Confidence 2111 0 00222222 1234455442221 1112234799999999999999999999999999999999999999
Q ss_pred HHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1365 LQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1365 Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|++.|.+.. +|+.|+.|+-+|+.+.. ||||.||.+|+++...+|++
T Consensus 442 I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 442 IHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred HHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 999887764 69999999999999886 89999999999998887776
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.2e-49 Score=508.29 Aligned_cols=515 Identities=16% Similarity=0.182 Sum_probs=376.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYV-LAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTII 358 (1428)
Q Consensus 280 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~I 358 (1428)
.++..+++.++.+++....|.+.+.+++.+.+.+. ..+. .++.++++.++.+++.....|...++..++|..+...+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~--~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l 174 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP--RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYL 174 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778888889999999999999998764322 1111 11122223333444444455556666677777777777
Q ss_pred HHHHhcC----CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHH
Q 000553 359 YQKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLI 432 (1428)
Q Consensus 359 y~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~lL~~~lg~a~-l~g~~v~~~~~ 432 (1428)
+++.++. +...+++ ..|++.+.+++|++.+.+... .+..+...++.++.+++.|+..++|.. ++.++.+++.+
T Consensus 175 ~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~ 253 (659)
T TIGR00954 175 YSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATG 253 (659)
T ss_pred HHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 6666654 2222232 579999999999999988654 456666777777777777776666644 33334445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1428)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1428)
.+..++.+++.+..++..+..++-.+..+|.++|++.||+|+.|+.+.+++.+.-++-.+...+.....+....+.....
T Consensus 254 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 333 (659)
T TIGR00954 254 VVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVA 333 (659)
T ss_pred HHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 66677888888899999999999999999999999999999999998888877655555555555555554444433222
Q ss_pred ----HHHHHHHHHHHHHh-C----CCCcHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 000553 513 ----TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 579 (1428)
Q Consensus 513 ----~~~~~~~f~~y~~~-~----~~Lt~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 579 (1428)
..+..+..+...+. . +.+|.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++..
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 334 KYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222332222 2 5688876544 2 33467789999999999999999999999999999653211
Q ss_pred hhhh-hhcCCCC--c---------ccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCC
Q 000553 580 HELE-QAANSPS--Y---------ISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVG 647 (1428)
Q Consensus 580 ~~~~-~~~~~~~--~---------~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~G 647 (1428)
+... .....+. . ...+..........++++|++|.|+.+ +.+|+|+||++++||.++|+||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nG 488 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNG 488 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCC
Confidence 1000 0000000 0 000000011123469999999998632 235999999999999999999999
Q ss_pred CcHHHHHHHHHcCccCCCeEEEEcC--cEEEEcCCCCCCcccHHHHHhcCC--------CCChHHHHHHHHHhcchHHHh
Q 000553 648 SGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDIS 717 (1428)
Q Consensus 648 sGKStll~~llG~~~~~~G~i~~~~--~i~y~~Q~p~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~c~l~~di~ 717 (1428)
||||||+++|+|+++|++|+|.+++ +++||+|+|+++++|++|||.++. ..++++..++++.+++++.++
T Consensus 489 sGKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~ 568 (659)
T TIGR00954 489 CGKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILE 568 (659)
T ss_pred CCHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHh
Confidence 9999999999999999999998864 699999999999999999999874 245667788999999988777
Q ss_pred cccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh
Q 000553 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1428)
Q Consensus 718 ~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 797 (1428)
. |.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ .. .++|+|+|||+++.+
T Consensus 569 ~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l-~~---~~~tvI~isH~~~~~ 642 (659)
T TIGR00954 569 R-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLC-RE---FGITLFSVSHRKSLW 642 (659)
T ss_pred h-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHH-HH---cCCEEEEEeCchHHH
Confidence 6 899999876 56799999999999999999999999999999999999999988763 22 378999999999999
Q ss_pred hcCCEEEEEeC
Q 000553 798 SAADMVVVMDK 808 (1428)
Q Consensus 798 ~~ad~i~~l~~ 808 (1428)
+.||++++|+.
T Consensus 643 ~~~d~il~l~~ 653 (659)
T TIGR00954 643 KYHEYLLYMDG 653 (659)
T ss_pred HhCCEEEEEeC
Confidence 99999999973
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.6e-52 Score=478.36 Aligned_cols=236 Identities=34% Similarity=0.623 Sum_probs=225.8
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.|||+|+.+++...+|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1270 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1270 ~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||||+|.+|++|+++|+++++..++++++++++.+++.+.+..+ +|++.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999887 899999999999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHhhC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRAST 1427 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~~~ 1427 (1428)
|||||||++||+++++.+++.|++.++++|||+||||++++..||||+||++|+++|.|+|++|++++ +.|++++++++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEK-SHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCc-HHHHHHHhhcc
Confidence 99999999999999999999999888899999999999999999999999999999999999999964 79999998765
No 103
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.8e-50 Score=448.38 Aligned_cols=464 Identities=20% Similarity=0.257 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000553 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1428)
Q Consensus 348 ~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~ 426 (1428)
....-.+.-..|.|++.|+.....+..+|.+..-+.--.+-|....++ +..+....++++++..++++..||......+
T Consensus 11 q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~ 90 (497)
T COG5265 11 QIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTL 90 (497)
T ss_pred HHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHH
Confidence 333445566778888888876655556666655444444445544443 3344456688999999999999987766555
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 427 ITILLIPVNKWI-ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1428)
Q Consensus 427 v~~~~~~~~~~~-~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1428)
+.++++.+-.+. ...-...+++.+++-.+......+.|-+-.++|.||-|+.+..+.....+.--+...|......+.+
T Consensus 91 vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln 170 (497)
T COG5265 91 VTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLN 170 (497)
T ss_pred HHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 555544332222 2222334444444444556677899999999999999998887766554332222222221111211
Q ss_pred HHHHH--HHHHHHHHHHHHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhh
Q 000553 506 FFWAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1428)
Q Consensus 506 ~~~~~--~~~~~~~~~f~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 583 (1428)
+.... ...+....+.+...+..+.+|.+...-.-++...+..|++.+......+-+++.-.++..+.+..+-......
T Consensus 171 ~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~p 250 (497)
T COG5265 171 FGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAP 250 (497)
T ss_pred HhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCC
Confidence 11110 0111122333344456788999999999999999999999999999999999999999988876542211110
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC
Q 000553 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1428)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~ 663 (1428)
. .|.. .....+.|.|++++|.|.++ +++|+++||++++|+.++|||++|+||||+++.|.+++++
T Consensus 251 d---a~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~ 315 (497)
T COG5265 251 D---APPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDV 315 (497)
T ss_pred C---Cccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCC
Confidence 0 1110 00234679999999999754 3459999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------cEEEEcCCCCCCcccHHHHHhcCCCC-ChHHHHHHHHHhcchHHHhcccCCCcccccC
Q 000553 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1428)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~ 729 (1428)
.+|.|.++| .||.|||+..|||+|+..||.+|++. .++...++.++.++...|+.+|+|++|.|||
T Consensus 316 ~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vge 395 (497)
T COG5265 316 NSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGE 395 (497)
T ss_pred cCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccch
Confidence 999999987 39999999999999999999999874 5677788999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCC
Q 000553 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1428)
Q Consensus 730 ~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 809 (1428)
+|-.||||+|||||+||++.++|+|++|||.|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||+|+||++|
T Consensus 396 rglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl~~g 473 (497)
T COG5265 396 RGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVLDNG 473 (497)
T ss_pred heeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEeeCC
Confidence 9999999999999999999999999999999999999999988776 443 56889999999999999999999999999
Q ss_pred eEEEecChHHHHhccccCc
Q 000553 810 QVKWIGSSADLAVSLYSGF 828 (1428)
Q Consensus 810 ~i~~~g~~~el~~~~~~~~ 828 (1428)
+|+|.|+|+||+..++.+.
T Consensus 474 ~i~erg~h~~ll~~~g~ya 492 (497)
T COG5265 474 RIVERGTHEELLAAGGLYA 492 (497)
T ss_pred EEEecCcHHHHHHcCChHH
Confidence 9999999999998876554
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-49 Score=461.01 Aligned_cols=255 Identities=25% Similarity=0.390 Sum_probs=216.9
Q ss_pred HHHHHHHHHHhhhcCCccccc-------c-C---CCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEE
Q 000553 1157 KEMVSLERVLEYMDVPQEELC-------G-Y---QSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIV 1225 (1428)
Q Consensus 1157 ~~~~sveRi~~~~~~~~e~~~-------~-~---~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIv 1225 (1428)
..+.+++|+.+|...+.|... . . ...+..||..|.|+|+|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 345667777777665544311 0 0 0113469999999999999999765567999999999999999999
Q ss_pred CCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCC--CCChHhHhcceEEEeCCccccCCcHHHhcCcC---CCCCh
Q 000553 1226 GRTGAGKSSILNALFRLTP-----ICGGQILVDGLNII--NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDD 1295 (1428)
Q Consensus 1226 GrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~--~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~---~~~~d 1295 (1428)
||||||||||+++|+|+++ |++|+|.|||+|+. ++++..+|++++||||+|.+|++|+++|+++. ...++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 45667899999999999999999999999842 23445
Q ss_pred HHH-----HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHH
Q 000553 1296 LKI-----WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAIS 1370 (1428)
Q Consensus 1296 ~ei-----~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~ 1370 (1428)
++. .++++.+++++ ++++.+++.|.+||||||||+|||||++++|+||||||||++||+++.+.+++.|+
T Consensus 195 ~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~ 269 (329)
T PRK14257 195 RKILEKIVEKSLKSAALWD-----EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELIL 269 (329)
T ss_pred HHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 544 34455555433 45678899999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1371 SECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1371 ~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
+.++++|+|+|||+++++.+ ||||+||++|+|+|.|+|+++..++.
T Consensus 270 ~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~ 316 (329)
T PRK14257 270 ELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPK 316 (329)
T ss_pred HHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCC
Confidence 98889999999999999998 99999999999999999999998765
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-46 Score=386.61 Aligned_cols=220 Identities=28% Similarity=0.439 Sum_probs=191.0
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC-CCChHhHhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1269 (1428)
.|+++||+.+|+.. .||||||++|++||++.||||||||||||+++|.++-+|++|+|.|||.++. ..++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 6999999999999999999999999999999999999999999999998774 33789999999
Q ss_pred EEEeCCccccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
|+|+|+..||+- |+-||+.... ..+.+|-. ++ ..+.++..||.......+..||||||||++|||||..+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~---~~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAR---EK--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHH---HH--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999986 9999985431 12222211 11 12334444676677777889999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
|+|+++|||||+|||+.-..+.+++++.. .|.|.|+|||.+...++ +|||+.||+|+++|.|+|+++..++..
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~ 229 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKS 229 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCC
Confidence 99999999999999999999999998875 58899999999999998 699999999999999999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=402.27 Aligned_cols=220 Identities=29% Similarity=0.444 Sum_probs=192.0
Q ss_pred EEEEEEEEEECCC---CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC---hHhH
Q 000553 1192 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1265 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~---~~~l 1265 (1428)
|+++||++.|+.. ...+|+||||+|++||..||+|+||||||||++++-++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 346999999999999999999999999999999999999999999999999987765 5667
Q ss_pred hcceEEEeCCccccC-CcHHHhcCcC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1266 RGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~-gTIR~NLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
|++||+|+|++-|++ -||.+|+.+- ...+.+|+.+ ...+.++-.||....+..+.+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~-----RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQ-----RVAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHH-----HHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 889999999999998 6999999642 1234444432 122333334888888888899999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
..+|+||+.|||||+|||+|.+.|.+.|++.- -|-|+++|||-++.+++ ||||.||++|+|+|.|+-.++..++.
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk 234 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPK 234 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcc
Confidence 99999999999999999999999999987753 38999999999999998 99999999999999999999999885
No 107
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=417.17 Aligned_cols=196 Identities=23% Similarity=0.309 Sum_probs=157.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|.|+||+|+|.++. ..+++++|-|.++++|++|||||+|||||++++.+.+.|..|.|.-.-. .+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 699999999998664 8999999999999999999999999999999999999999999864321 1233
Q ss_pred EEeCCc---cccCCcHHHhcCcC-C-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSP---FLFEGSLRDNLDPF-H-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp---~lf~gTIR~NLdp~-~-~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
.--|.- .-++-|.-+|+.|- . ....+++...|.++||.... .+.++ .+||+|||.|+++||++++.|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 334432 34566777776442 2 24456777788888765321 12222 379999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEe-cCh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ-GNP 1408 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~-g~p 1408 (1428)
.||+|||||++||.+|-....++|.+. ..+||+|+|+...|.. +++|++.++|.+... |..
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccH
Confidence 999999999999999999999999764 4589999999999988 699999999998764 443
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5.2e-44 Score=407.78 Aligned_cols=238 Identities=44% Similarity=0.744 Sum_probs=221.6
Q ss_pred CCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhc
Q 000553 1188 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1267 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1267 (1428)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754456999999999999999999999999999999999999999999999999999999889999
Q ss_pred ceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1268 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+++++||+|.+|++|+++|+++.....+++++++++..++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544556788899999999988888 9999999999999999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999988777899999999999999999999999999999999999998878889998764
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-45 Score=376.33 Aligned_cols=220 Identities=30% Similarity=0.430 Sum_probs=200.2
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC-----ceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~-----G~I~IDG~di~~--i~~ 1262 (1428)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 469999999999999999999999999999999999999876 999999999965 678
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCCC----C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
-.||+++|+|.|.|.-|+.||+||+.++-. . -|+-+.++|++++||+.+.. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999976521 1 24557889999999998863 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
||||||.-+|+||+||||||+||+-+...|.+.|.+..++.||++|||.+.-... +|+...+-.|+++|+|+-+++..+
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 9999999999999999999999999999999999999999999999999998776 699999999999999999999987
Q ss_pred CC
Q 000553 1415 EC 1416 (1428)
Q Consensus 1415 ~~ 1416 (1428)
+.
T Consensus 239 P~ 240 (253)
T COG1117 239 PK 240 (253)
T ss_pred cc
Confidence 74
No 110
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.8e-43 Score=395.01 Aligned_cols=232 Identities=35% Similarity=0.569 Sum_probs=211.9
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544579999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+||++.+|+.|+++|+..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999976432 3455677778888888888887 8888888888999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000553 1349 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~ 1424 (1428)
||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999986 467887765
No 111
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=375.81 Aligned_cols=223 Identities=31% Similarity=0.473 Sum_probs=195.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+|+||+++|. ...+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~--~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYG--NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcC--CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 79999999997 3579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|=|.--||+- ||.+||..-. ..+.+++.+- ..+.+...|||. .....+..|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 9999985322 2344444322 334444448875 455677889999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHH
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1421 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~ 1421 (1428)
+||+||||.++||+-|...+|+-+.+..+ ++|+|+|||+++.... +|||.||++|+++.+|+|+++++++...|-+
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~FV~ 233 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPANDFVE 233 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHHHHH
Confidence 99999999999999999999998876543 8999999999998655 8999999999999999999999998766643
No 112
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-43 Score=415.18 Aligned_cols=262 Identities=21% Similarity=0.291 Sum_probs=217.7
Q ss_pred CCCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEE
Q 000553 528 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 607 (1428)
Q Consensus 528 ~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 607 (1428)
+.++++++|+++++++.+..|+..+|..... ..|+++|+..++.+...... . .+.+..++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--D-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--C-----------CCcCceEE
Confidence 5789999999999999999999887765433 56999998766533210000 0 12345799
Q ss_pred EEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEc-----------
Q 000553 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHAS----------- 671 (1428)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~----------- 671 (1428)
++|+++.|.... +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++
T Consensus 83 ~~nls~~y~~~~----~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNRT----KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 999999996421 235999999999999999999999999999999999996 579998764
Q ss_pred ----CcEEEEcCCCCCCcccHHHHHhcCCCCC----hH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 672 ----GSIAYVPQVPWILSGTIRDNILFGKNYD----PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 672 ----~~i~y~~Q~p~l~~~ti~~nI~~g~~~~----~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
+.++||||+||++++||+|||.|+..++ ++ .|+++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 3599999999999999999999875322 22 3677888998866553 678999999999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 818 (1428)
|||+||||++++|+|+||||||||||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999986554 554 4567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9864
No 113
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-42 Score=387.87 Aligned_cols=219 Identities=53% Similarity=0.912 Sum_probs=205.6
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|.++++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1270 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1270 ~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+|+||+|.+|++|+++|++++....++++.++++..++.+.+..+ |+++.+++.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666777889999999999998876 999999888999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecCh
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p 1408 (1428)
+||||||++||+.+.+.+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 114
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.2e-43 Score=401.53 Aligned_cols=194 Identities=21% Similarity=0.280 Sum_probs=162.3
Q ss_pred CCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhc
Q 000553 1188 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1267 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1267 (1428)
....+++.+|+|.|.++.++.+++++++++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3457999999999998877899999999999999999999999999999999999999999988765 78
Q ss_pred ceEEEeCCcccc-CCcHHH-----hcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHH
Q 000553 1268 RFAVVPQSPFLF-EGSLRD-----NLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1268 ~i~~VpQdp~lf-~gTIR~-----NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G-~~LSgGQrQrl~LARA 1340 (1428)
+|++-.|.-+=| +-.+-. -..|+ .+++|+.+.|... |++..+...+ ..||||||-|+++|-.
T Consensus 428 ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG--~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~ 496 (582)
T KOG0062|consen 428 RIKYFAQHHVDFLDKNVNAVDFMEKSFPG--KTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAAC 496 (582)
T ss_pred eecchhHhhhhHHHHHhHHHHHHHHhCCC--CCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHH
Confidence 999999977532 222211 11222 3788887776655 5565555444 4699999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEe
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQ 1405 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~ 1405 (1428)
.+.+|.+|||||||..||.++-..+-++|+. |.| -||+|+|+.+.+.. |+.++|.++|+|...
T Consensus 497 ~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 497 TWNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred hcCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999999999999999999999999999976 444 69999999999987 899999999999763
No 115
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.8e-42 Score=378.08 Aligned_cols=207 Identities=46% Similarity=0.864 Sum_probs=187.6
Q ss_pred CCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH
Q 000553 1186 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1265 (1428)
Q Consensus 1186 wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l 1265 (1428)
||..+.++++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543479999999999999999999999999999999999999999999999999988888888
Q ss_pred hcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1266 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998765444444433332 24556789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecCh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p 1408 (1428)
+|+||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999998875
No 116
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-42 Score=399.63 Aligned_cols=223 Identities=24% Similarity=0.382 Sum_probs=190.7
Q ss_pred CCccEEEEEEEEEECCC---CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----
Q 000553 1188 FQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1260 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i---- 1260 (1428)
....|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 34469999999999743 23699999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChHhHhcceEEEeCCc--cccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhc
Q 000553 1261 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1322 (1428)
Q Consensus 1261 ------------~~~~lR~~i~~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e 1322 (1428)
+...+|+++++|+|+| .+|++||++|+.+... .++++. .++ ..+.++.+|++ ...++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~--~~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKL--AKFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHH--HHHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 223322 222 23456666886 56788
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhh-hcCEEEEEeCC
Q 000553 1323 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1400 (1428)
Q Consensus 1323 ~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G 1400 (1428)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998753 5899999999999885 59999999999
Q ss_pred eEEEecChhHHhccC
Q 000553 1401 HLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1401 ~ive~g~p~eLl~~~ 1415 (1428)
++++.|+|+++.+++
T Consensus 253 ~i~~~g~~~~~~~~~ 267 (320)
T PRK13631 253 KILKTGTPYEIFTDQ 267 (320)
T ss_pred EEEEeCCHHHHhcCH
Confidence 999999999887643
No 117
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9.4e-42 Score=399.99 Aligned_cols=223 Identities=25% Similarity=0.388 Sum_probs=188.6
Q ss_pred EEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---Hh
Q 000553 1192 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1266 (1428)
|+++||+++|+.+ ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887554 58
Q ss_pred cceEEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1267 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
++|++|||++.+|+ .|+++|+.... ..+.+++.+ ...+.++.+||+......+..||||||||++|||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~ 156 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999996 69999996421 122222221 1223333446655556667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
.+|+|||||||||+||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|+++|.|++++++.++...+
T Consensus 157 ~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~~~~ 236 (343)
T TIGR02314 157 SNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPKTPL 236 (343)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCCcHH
Confidence 99999999999999999999999999988753 7999999999999976 89999999999999999999987664434
No 118
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=382.95 Aligned_cols=230 Identities=34% Similarity=0.582 Sum_probs=208.4
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+....++++|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+||+|.+|+.|++||+..+.. .+.+++.+.++..++.+.++.+ |+++.++....+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999986533 3445666777888888888887 8888888888899999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHH
Q 000553 1349 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSF 1422 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l 1422 (1428)
||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.++. +.|+.+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~ 233 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG-GVYAKL 233 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC-cchhhh
Confidence 9999999999999999999999887889999999999999999999999999999999999998754 455543
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-41 Score=378.96 Aligned_cols=225 Identities=40% Similarity=0.652 Sum_probs=206.7
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|.|+++|++++|+. .+++++|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 24699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1270 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1270 ~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+|+||+|.+|++|+++|+..+.. ..++++.++++.+++.+.++.+ |+++.++.....||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999976543 3456777888889999888887 89998888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|+++++.++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 999999999999999999999998876789999999999999889999999999999999999887653
No 120
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-41 Score=379.39 Aligned_cols=232 Identities=37% Similarity=0.639 Sum_probs=211.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 469999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EeCCccccCCcHHHhcCcCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~-~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997643 34566778888888998888887 8999998888899999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHHHh
Q 000553 1349 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFVRA 1425 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~~ 1425 (1428)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++..
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~~ 235 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWKA 235 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHhc
Confidence 999999999999999999999887668899999999999999999999999999999999999875 4677777653
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.4e-42 Score=376.02 Aligned_cols=214 Identities=29% Similarity=0.456 Sum_probs=187.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+ .+++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.|+.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccc-cCCcHHHhcCcCC--------CCC--hH-HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000553 1271 VVPQSPFL-FEGSLRDNLDPFH--------MND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1271 ~VpQdp~l-f~gTIR~NLdp~~--------~~~--d~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
||||++.. |.-||+|-+..+. ..+ |+ .+.+||+.+++.++.+ ..-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~---------r~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD---------RPVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc---------CcccccChhHHHHHHHH
Confidence 99999754 5559998775332 122 33 4667788887766542 23346999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|||.++|+||+||||||+||....-.+.+.+++.. ++.|+|+|.|+++.... ||++++|++|+++..|+|+|.+..+
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~e 230 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTEE 230 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCHH
Confidence 99999999999999999999999999999998875 47999999999987765 7999999999999999999998743
No 122
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=372.16 Aligned_cols=210 Identities=29% Similarity=0.457 Sum_probs=184.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|... +||+||||+|++||.+||+||||||||||+++++|+++|.+|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999755 49999999999999999999999999999999999999999999999998765433 57899
Q ss_pred EEeCCc---cccCCcHHHhcCcCCC-----------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000553 1271 VVPQSP---FLFEGSLRDNLDPFHM-----------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1271 ~VpQdp---~lf~gTIR~NLdp~~~-----------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1336 (1428)
||||.. .-|+-||+|-+..+.. .+.+++.+||++++++++. +.+++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999965 3588999999865421 1237788999999988764 33444 59999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|||||+++|++|+|||||+++|+.++..|.+.|++..+ ||||++|+|+++.+.+ ||+|+.|. +++...|+|++.+..
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 99999999999999999999999999999999988764 9999999999999987 79999995 678899999999875
Q ss_pred C
Q 000553 1415 E 1415 (1428)
Q Consensus 1415 ~ 1415 (1428)
+
T Consensus 229 ~ 229 (254)
T COG1121 229 E 229 (254)
T ss_pred H
Confidence 4
No 123
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-40 Score=416.86 Aligned_cols=198 Identities=25% Similarity=0.336 Sum_probs=162.5
Q ss_pred CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCceEEECCeeCCCCChHhHhcceEEEeCCcccc-C
Q 000553 1204 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF-E 1280 (1428)
Q Consensus 1204 ~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~--~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf-~ 1280 (1428)
+....|+|||=-++||--.|++|.||||||||++.|.+=..- .+|+|+|||.+..+ +..++++|||.|++.-. .
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 345689999999999999999999999999999999976532 47999999998765 78899999999988644 4
Q ss_pred CcHHHhcCcC------CCCChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC-CEEE
Q 000553 1281 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1349 (1428)
Q Consensus 1281 gTIR~NLdp~------~~~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~-~ILl 1349 (1428)
-||||-|.+. .+.+++| +.++++..+|.+.- |..||..|..||..||.||.||=-|+.|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 5999998542 2334443 23344444443332 45678878889999999999999999999 8999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh--hhhcCEEEEEeC-CeEEEecChh
Q 000553 1350 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLVEQGNPQ 1409 (1428)
Q Consensus 1350 LDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~t--i~~~DrI~Vl~~-G~ive~g~p~ 1409 (1428)
||||||+||.++...|.+.+|+.. .|+||+..-|.++. .+.+||++.|++ |+.|.+|++.
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG 1017 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLG 1017 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcc
Confidence 999999999999999999999875 69999999999885 356899999974 8999888764
No 124
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-42 Score=355.48 Aligned_cols=200 Identities=28% Similarity=0.361 Sum_probs=172.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.|+++|++-+|.. ..+|+|||++|++||.++|+|||||||||||++|.|+-+|++|+|.++|
T Consensus 2 mi~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 3678888887753 2359999999999999999999999999999999999999999999988
Q ss_pred --cEEEEcCCCCCCcc-cHHHHHhcCCC----CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPWILSG-TIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~----~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
++|+|+|+..||.- ||.|||..+.- .+ +++-.+.++..+|.+..+..|. .||||||||
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQR 144 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQR 144 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHH
Confidence 37899999999865 99999998631 22 3445567778888777666665 899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
|||||||..+|+++|+|||||||||+....+.+- +......|.|.|+|||.+.+... ||||+.|++|+|+++|+++++
T Consensus 145 VAIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 145 VAIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred HHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 33324567899999999999986 999999999999999999988
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 224 f~ 225 (240)
T COG1126 224 FD 225 (240)
T ss_pred hc
Confidence 54
No 125
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=8.6e-41 Score=377.60 Aligned_cols=231 Identities=37% Similarity=0.611 Sum_probs=207.2
Q ss_pred EEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1192 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1271 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1271 ~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
|+||+|.+|+.|+++|+..... ...+++.+.++..++.+.+..+ |+++.++....+||+|||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976432 3455677778888888888877 888888888889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
|||||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+.. +..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK-GVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC-hhHHHHh
Confidence 99999999999999999999998876789999999999999889999999999999999999998754 4555554
No 126
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-41 Score=383.96 Aligned_cols=221 Identities=29% Similarity=0.459 Sum_probs=193.6
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++||+++|++.. +|+|+|++|+.||.++++||||||||||+++|.|+.+|++|+|.|||.|+.++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999999875 7899
Q ss_pred EEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+|+|+..||+- ||++||.+.-. .+.+|+.+.. .+..+.++++..+...+..||||||||++|||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV-----~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRV-----KEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHH-----HHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999986 99999986532 2334443222 233344577777888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
+++||||.|+||......+..-|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|.|+.+++...|-
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n~fV 230 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPANLFV 230 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccchhh
Confidence 9999999999999999998888877543 7899999999998876 799999999999999999999998877663
No 127
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-41 Score=356.47 Aligned_cols=225 Identities=29% Similarity=0.463 Sum_probs=185.7
Q ss_pred cEEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC-ChHhHhc
Q 000553 1191 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-PVRDLRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i-~~~~lR~ 1267 (1428)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+.... +....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997542 2599999999999999999999999999999999999999999999999776543 3446788
Q ss_pred ceEEEeCCcc--ccC-CcHHHhcC-cCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000553 1268 RFAVVPQSPF--LFE-GSLRDNLD-PFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1268 ~i~~VpQdp~--lf~-gTIR~NLd-p~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1339 (1428)
.+-+|+|||. |=+ -||++-|. |... ...++++++|+.+||.+. .....+..||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~--------~l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPS--------FLDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHH--------HHhcCchhcChhHHHHHHHHH
Confidence 8999999996 222 26666552 2221 123456777777665432 344566679999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
||.-+|++||+|||||+||.-..+.|.+.+.+..+ +-|.|+|||++..+.. ||||+||++|+++|.++-.++.+.+.
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~~~ 234 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSHPS 234 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcCCc
Confidence 99999999999999999999999999999987765 4599999999999987 89999999999999999999998755
Q ss_pred cHHHHHH
Q 000553 1417 SVFSSFV 1423 (1428)
Q Consensus 1417 s~f~~l~ 1423 (1428)
..|.+.+
T Consensus 235 h~ytr~L 241 (252)
T COG1124 235 HPYTREL 241 (252)
T ss_pred cHHHHHH
Confidence 5555543
No 128
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.6e-41 Score=353.94 Aligned_cols=229 Identities=28% Similarity=0.451 Sum_probs=196.6
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hH
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1265 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1265 (1428)
.-.|++++|+++|.+ ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 347999999999964 4699999999999999999999999999999999999999999999999999888764 56
Q ss_pred hcceEEEeCCccccCC-cHHHhcCc-CCCC---ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHH
Q 000553 1266 RGRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~g-TIR~NLdp-~~~~---~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LAR 1339 (1428)
|+++|++.|+..||+. ||+||+.+ ..++ +++++.+ +.. ..++..||... ....++.||||.+.|++|||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~-lv~----~KL~~VGL~~~~~~~~PsELSGGM~KRvaLAR 158 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRE-LVL----MKLELVGLRGAAADLYPSELSGGMRKRVALAR 158 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHH-HHH----HHHHhcCCChhhhhhCchhhcchHHHHHHHHH
Confidence 9999999999999987 99999964 3333 3343332 111 11233377776 44567789999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
|+.-+|+||++|||||+||+-+...+-+.|++..+ +.|+++|||+++++.. ||||+++.+|+|+-.|+|+|+.+.++
T Consensus 159 AialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~sd~ 238 (263)
T COG1127 159 AIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLASDD 238 (263)
T ss_pred HHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhCCC
Confidence 99999999999999999999999999888877643 8999999999999987 69999999999999999999999888
Q ss_pred cHHHHHHH
Q 000553 1417 SVFSSFVR 1424 (1428)
Q Consensus 1417 s~f~~l~~ 1424 (1428)
-..++.++
T Consensus 239 P~v~qf~~ 246 (263)
T COG1127 239 PWVRQFFN 246 (263)
T ss_pred HHHHHHhc
Confidence 77777664
No 129
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=376.41 Aligned_cols=226 Identities=31% Similarity=0.450 Sum_probs=192.6
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000553 1271 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLC 1349 (1428)
Q Consensus 1271 ~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILl 1349 (1428)
++||+|.+|+.|+++|+.......+.+ ...+.+.++.+|++ .........||||||||++||||++++|++||
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 154 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEK------NVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLL 154 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcH------HHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999997532211111 01123344445665 34566677899999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000553 1350 LDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1350 LDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~ 1424 (1428)
|||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++..++...+.+.+.
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~ 232 (241)
T PRK14250 155 LDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTKLFI 232 (241)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHHHHH
Confidence 999999999999999999998764 37999999999999876 8999999999999999999998766545655443
No 130
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-41 Score=370.04 Aligned_cols=215 Identities=32% Similarity=0.511 Sum_probs=192.6
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC-CCChHhHhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1269 (1428)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999877 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEeCCc--cccCCcHHHhcCcCCC---CChHHH----HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1270 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLKI----WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1270 ~~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei----~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
|+|.|+| .+|..||.+.+.++.. .+.+|+ .++|+.+ |+.........+||||||||+|||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~v---------gl~~~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELV---------GLEELLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHc---------CchhhccCCccccCCcceeeHHhhHH
Confidence 9999999 7999999999987643 244443 3444444 44444566777999999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|..+|+|||||||||+||+...+.+.+.+++..+ +.|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999998754 4799999999999998 8999999999999999999999864
No 131
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=375.38 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=184.8
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1268 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999963 469999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEEeCCccccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
++++||+|.+|++ |+++|+.... ..+.++..+. ..+.++.+|++.........||||||||++|||||++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996431 1222222211 2233444466555556666899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|++++.|+++++.+..
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 228 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRASD 228 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCCC
Confidence 9999999999999999999999999988643 7899999999999876 8999999999999999999998643
No 132
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-40 Score=370.70 Aligned_cols=217 Identities=37% Similarity=0.540 Sum_probs=196.8
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999965335699999999999999999999999999999999999999999999999999888777788999
Q ss_pred EEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1270 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1270 ~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+++||+|.+|+.|+++|+..... .+.+++.+.++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3445677888999998888776 89988888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEec
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g 1406 (1428)
+|||||||++||.++.+.+.+.|++..+++|||++||+++.+.-||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998764
No 133
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=391.25 Aligned_cols=224 Identities=27% Similarity=0.428 Sum_probs=190.8
Q ss_pred EEEEEEEEEECC--CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---Hh
Q 000553 1192 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1266 (1428)
|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2357999999999999999999999999999999999999999999999999998877654 47
Q ss_pred cceEEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1267 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
++++||||++.+|+ .|+++|+.... ..++++..+ .+.+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999887 69999996431 122222211 2334555557776667777789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++..++...+
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 236 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKHPL 236 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCcHH
Confidence 99999999999999999999999999988643 7899999999999886 89999999999999999999987654434
Q ss_pred H
Q 000553 1420 S 1420 (1428)
Q Consensus 1420 ~ 1420 (1428)
.
T Consensus 237 ~ 237 (343)
T PRK11153 237 T 237 (343)
T ss_pred H
Confidence 3
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9.6e-41 Score=374.42 Aligned_cols=213 Identities=32% Similarity=0.463 Sum_probs=180.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC-----CCCCceEEECCeeCCCCC--hHh
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~-----~~~~G~I~IDG~di~~i~--~~~ 1264 (1428)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 567
Q ss_pred HhcceEEEeCCccccCCcHHHhcCcCCC---C-ChHHHHHHHHHccHHHHHHhCCCchhhhcC--CCCCChhHHHHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DDLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQLICLA 1338 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~-~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~--G~~LSgGQrQrl~LA 1338 (1428)
+|++++|+||++.+|..|+++|+.+... . .+++..+ .+.+.++.+|++...... +.+||||||||++||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la 153 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDE-----RVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLA 153 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHH
Confidence 7889999999999998899999965321 1 1111111 122333444555444444 468999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
|||+++|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 154 RALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999987656899999999999876 899999999999999998764
No 135
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-40 Score=356.23 Aligned_cols=208 Identities=30% Similarity=0.421 Sum_probs=173.7
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhH-
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDL- 1265 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~l- 1265 (1428)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++- ..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997543 368999999999999999999999999999999999999999999999999999884 334
Q ss_pred hcceEEEeCCccccCC-cHHHhcCc---CCCCChHHHHHHHHHccHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHH
Q 000553 1266 RGRFAVVPQSPFLFEG-SLRDNLDP---FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~g-TIR~NLdp---~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~LARA 1340 (1428)
|++||+|+|+..|++. |++||+.. +......+..++ ..+..+.+||..... .....||||||||+|||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARA 156 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARA 156 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHH
Confidence 4679999999999876 99999862 222221111111 122333346665444 5577899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEE
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVE 1404 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive 1404 (1428)
|+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.+|++.+
T Consensus 157 L~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 157 LINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999998874 3789999999999999999999999999543
No 136
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=381.53 Aligned_cols=218 Identities=30% Similarity=0.505 Sum_probs=185.3
Q ss_pred EEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC--hHhHh
Q 000553 1192 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR 1266 (1428)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997432 46999999999999999999999999999999999999999999999999998753 45788
Q ss_pred cceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000553 1267 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1267 ~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLd--t~v~e~G~~LSgGQrQrl~LAR 1339 (1428)
++++||||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+||+ .........||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 578899999997432 1233332211 12333444665 4456667789999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|++++++++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999988653 7899999999999865 899999999999999999998763
No 137
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-40 Score=373.10 Aligned_cols=219 Identities=26% Similarity=0.430 Sum_probs=187.6
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCCceEEECCeeCCCCChHhHhc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~ 1267 (1428)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999964 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEeCCccccCCcHHHhcCcCCCC---------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000553 1268 RFAVVPQSPFLFEGSLRDNLDPFHMN---------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~gTIR~NLdp~~~~---------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
+++|+||+|.+|+.|+++|+.++... .++++.++++.+++.+.+ .....+.+.+||+|||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 99999999999999999999754211 111233444444432221 1234566778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
|||+++|++|||||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 233 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENPK 233 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCCC
Confidence 9999999999999999999999999999999887678999999999998875 89999999999999999999987553
No 138
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=387.62 Aligned_cols=223 Identities=29% Similarity=0.434 Sum_probs=189.9
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
+..|+++|++++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.+ |++
T Consensus 4 ~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 79 (351)
T PRK11432 4 KNFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRD 79 (351)
T ss_pred CcEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 347999999999963 4699999999999999999999999999999999999999999999999999887653 578
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+++|+|++.+|+. ||++|+.+.-. .+++++.+. +.+.++.+|++.........||||||||++|||||+++
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~ 154 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELVDLAGFEDRYVDQISGGQQQRVALARALILK 154 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999999986 99999975321 222322211 12233333555555666778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
|+||+||||||+||..+.+.+++.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.+++...|.
T Consensus 155 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~~ 233 (351)
T PRK11432 155 PKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRFM 233 (351)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchHH
Confidence 999999999999999999999999988754 7999999999999866 899999999999999999999988876554
No 139
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.2e-40 Score=369.75 Aligned_cols=214 Identities=27% Similarity=0.394 Sum_probs=181.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++||+++|+.+.+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999753356999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred EeCCcccc-CCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf-~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||+|.+| ..|+++|+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999988 569999986421 112211111 123344444665555555668999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999987777999999999999976 899999999999999999875
No 140
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-40 Score=379.30 Aligned_cols=220 Identities=28% Similarity=0.440 Sum_probs=187.6
Q ss_pred cEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1191 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
.++++||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEeCCcc--ccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~--lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+++||+|. ++..||++|+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~ 158 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKE-----RVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMR 158 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 99999983 566799999975321 22222111 112333444565556666778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+++
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 159 PKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999987643 89999999999999889999999999999999999988653
No 141
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.3e-40 Score=373.72 Aligned_cols=222 Identities=26% Similarity=0.442 Sum_probs=187.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1270 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988776554 57899
Q ss_pred EEeCCccccCC-cHHHhcCcCCCC-ChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~~-~d~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++||+|.+|++ |+++|+...... ....+ ...-......+.++.+|++...+.....||||||||++|||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000111234556666887777777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNNP 234 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccCC
Confidence 99999999999999999999999999998764 68999999999999977 8999999999999999999997643
No 142
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=349.39 Aligned_cols=221 Identities=28% Similarity=0.430 Sum_probs=190.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC---hHhHhc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~ 1267 (1428)
.|+++||+.+|+ +...+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 589999999997 4567999999999999999999999999999999999999999999999999998887 677789
Q ss_pred ceEEEeCCccccCC-cHHHhcCc------------CCCCChH---HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000553 1268 RFAVVPQSPFLFEG-SLRDNLDP------------FHMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1331 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~g-TIR~NLdp------------~~~~~d~---ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1331 (1428)
++|+|.|++-|-+. |+-+|+.. ++.++.+ ...++|+++|+.+.. -.+..+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A---------~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA---------YQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH---------HHHhccCCcch
Confidence 99999999998875 89999742 2334433 345666666665543 33445799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
+||++|||||..+|+|++-|||+|+||+.+.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+..|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998864 58999999999999987 699999999999999999
Q ss_pred hHHhccCCcHHHHHHH
Q 000553 1409 QTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1409 ~eLl~~~~s~f~~l~~ 1424 (1428)
+||-+ ..+.+.|.
T Consensus 233 ~el~~---~~~~~iYg 245 (258)
T COG3638 233 SELTD---EALDEIYG 245 (258)
T ss_pred hhhhH---HHHHHHhc
Confidence 99643 24555543
No 143
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=388.70 Aligned_cols=222 Identities=23% Similarity=0.352 Sum_probs=189.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999422 4699999999999999999999999999999999999999999999999999887764 47899
Q ss_pred EEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
||||++.+|+. ||++|+.+... .+..+..+ ...+.++.+|++...+.....||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975422 22222211 12233444466666666777899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
+||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPASTFV 231 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCccHHH
Confidence 9999999999999999999999987653 7899999999998865 899999999999999999999988765554
No 144
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6e-40 Score=387.65 Aligned_cols=221 Identities=28% Similarity=0.421 Sum_probs=192.0
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.. +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
||||++.+|+ .||++|+.+... .+..+.. ....+.++.+||+.........||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 599999975321 1222221 123445555678777777888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|-
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~~ 231 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPFV 231 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHHH
Confidence 9999999999999999999999987653 7899999999999865 899999999999999999999998876663
No 145
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=374.87 Aligned_cols=221 Identities=28% Similarity=0.405 Sum_probs=188.1
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CC
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1261 (1428)
++.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 578999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
...+|++++|+||+|.+|+.|+++|+.... ..+. ++++++++.+++.+. ++...++...+||+||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 234444444443221 124456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
|++|||||+++|+||||||||++||.++.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987678899999999999875 8999999999999999999998
Q ss_pred ccCC
Q 000553 1413 QDEC 1416 (1428)
Q Consensus 1413 ~~~~ 1416 (1428)
+.+.
T Consensus 244 ~~~~ 247 (260)
T PRK10744 244 TKPA 247 (260)
T ss_pred hCCC
Confidence 7543
No 146
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=380.60 Aligned_cols=219 Identities=27% Similarity=0.431 Sum_probs=187.4
Q ss_pred cEEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----ChH
Q 000553 1191 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1263 (1428)
.|+++||+++|+++. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 379999999996432 3699999999999999999999999999999999999999999999999999654 346
Q ss_pred hHhcceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000553 1264 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1337 (1428)
.+|++|+||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||++ ..+..+.+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~l 156 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAI 156 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 7899999999998 588889999996532 1232222221 234555668874 4566788999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 157 araL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 157 VSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999998764 48999999999999865 799999999999999999998874
No 147
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-40 Score=369.70 Aligned_cols=216 Identities=28% Similarity=0.393 Sum_probs=183.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876553 3678999
Q ss_pred EeCCccccC-CcHHHhcCcCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||+|.+|+ .|+++|+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999753211 111111 112344455577666666677899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
+|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 229 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHPA 229 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCCC
Confidence 9999999999999999999999999987643 7899999999998765 89999999999999999999986543
No 148
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-40 Score=371.97 Aligned_cols=226 Identities=29% Similarity=0.453 Sum_probs=190.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+||+|.+|+ .|+++|+..... .+.++. .....+.++.+|++. .....+.+||+|||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999986 599999964321 111111 112344555567764 556777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCc-HHHH
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS-VFSS 1421 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s-~f~~ 1421 (1428)
++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.. .+..
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPANDFVAE 234 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCCChHHHH
Confidence 9999999999999999999999998864 37999999999998765 899999999999999999999765433 3344
Q ss_pred HH
Q 000553 1422 FV 1423 (1428)
Q Consensus 1422 l~ 1423 (1428)
+.
T Consensus 235 ~~ 236 (242)
T cd03295 235 FV 236 (242)
T ss_pred Hh
Confidence 43
No 149
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.5e-40 Score=371.81 Aligned_cols=221 Identities=29% Similarity=0.437 Sum_probs=186.7
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CceEEECCeeCCCC--ChHh
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~-----~G~I~IDG~di~~i--~~~~ 1264 (1428)
++++||+++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4566
Q ss_pred HhcceEEEeCCccccCCcHHHhcCcCC---C-CChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~gTIR~NLdp~~---~-~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1336 (1428)
.|++++|+||++.+|+.|+++|+.... . .+.++..+ ...+.++.+|++ ........+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 11111111 122333444554 4556667789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|||||+++|+++||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 234 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTNP 234 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 999999999999999999999999999999999987667899999999999876 8999999999999999999998765
Q ss_pred CcHH
Q 000553 1416 CSVF 1419 (1428)
Q Consensus 1416 ~s~f 1419 (1428)
...+
T Consensus 235 ~~~~ 238 (247)
T TIGR00972 235 KEKR 238 (247)
T ss_pred CChH
Confidence 4444
No 150
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.6e-40 Score=367.80 Aligned_cols=215 Identities=26% Similarity=0.423 Sum_probs=182.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1270 (1428)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988776554 67899
Q ss_pred EEeCCccccCC-cHHHhcCcCCCCC-hHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~~~-d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
|+||++.+|++ |+++|+.+..... +.+..+ .+.+.++.+ +++...+.....||+|||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 111111 122233333 455555666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 99999999999999999999998764 57999999999999876 89999999999999999988864
No 151
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=373.08 Aligned_cols=223 Identities=26% Similarity=0.390 Sum_probs=187.7
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1262 (1428)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 36999999999964 4699999999999999999999999999999999999997 48999999999863 345
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
...|++++|+||+|.+|+.|+++|+.+... .+ ++++.++++.+++.+.+ +......+.+||||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQR 158 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHH
Confidence 667889999999999999999999964321 11 22344555555543222 223344567899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988778999999999999866 89999999999999999999987
Q ss_pred cCCcHH
Q 000553 1414 DECSVF 1419 (1428)
Q Consensus 1414 ~~~s~f 1419 (1428)
++.-.|
T Consensus 239 ~~~~~~ 244 (254)
T PRK14273 239 NPKNTK 244 (254)
T ss_pred CCCChH
Confidence 654333
No 152
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.4e-40 Score=367.01 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.0
Q ss_pred CCccEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHh
Q 000553 1188 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR 1266 (1428)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999753 24699999999999999999999999999999999999999999999999999888877888
Q ss_pred cceEEEeCCccccCCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1267 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
++++++||+|.+|++|+++|+++... ....++++..+..++.+.++.+ |+++.+++...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999985432 2334555666667788888888 89988898899999999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeE
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1402 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1402 (1428)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987778999999999999988999999999975
No 153
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=377.78 Aligned_cols=218 Identities=29% Similarity=0.460 Sum_probs=184.7
Q ss_pred EEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC----CChHh
Q 000553 1192 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1264 (1428)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEeCCc--cccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000553 1265 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1265 lR~~i~~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1338 (1428)
+|++++||+|+| .+|+.|+.+|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999964321 22222211 123344445664 345667778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+|+++..+
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999999998754 48999999999998865 899999999999999999999764
No 154
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.5e-40 Score=335.44 Aligned_cols=207 Identities=28% Similarity=0.373 Sum_probs=180.7
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1268 (1428)
|+|+||+++|+.+ +++|+||||+|++||.+=++||||||||||+++|++...|++|+|.++|.|+++++. .-||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999877 789999999999999999999999999999999999999999999999999988765 458999
Q ss_pred eEEEeCCccccCC-cHHHhcCcCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~---~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
||+|.||--|.+. ||.||+.+-- ..+. +++.++|+.+||.+ ....-+..|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~---------k~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKH---------KARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccch---------hhhcCccccCchHHHHHHHHHH
Confidence 9999999987765 9999986421 1222 23455666665554 4444566899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhc-CEEEEEeCCeEEEecCh
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~-DrI~Vl~~G~ive~g~p 1408 (1428)
+..+|++||-||||-|||+++...|.+.+.+.- .|.||++.||+.+.+.++ -|++.+++|+++....+
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999998764 599999999999999997 78999999999987654
No 155
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-40 Score=370.16 Aligned_cols=219 Identities=28% Similarity=0.434 Sum_probs=185.3
Q ss_pred EEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHh
Q 000553 1192 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1266 (1428)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999876643 347
Q ss_pred cceEEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1267 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
++++|+||+|.+|+ .|+++|+.... ..+..+. .....+.++.+|++........+||+|||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999986421 1121111 112234455557766666667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||++++|++|++++.|+++++.+++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 232 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFANP 232 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999998764 37899999999999876 8999999999999999999987643
No 156
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=372.53 Aligned_cols=219 Identities=28% Similarity=0.422 Sum_probs=185.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1263 (1428)
.|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 369999999999999999999999999999999999975 589999999999875 3455
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++|+||++.+|++|+++|+.+.. ... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 111 22344445544443221 2334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999999987667899999999999865 899999999999999999999876
Q ss_pred CC
Q 000553 1415 EC 1416 (1428)
Q Consensus 1415 ~~ 1416 (1428)
+.
T Consensus 239 ~~ 240 (253)
T PRK14242 239 PR 240 (253)
T ss_pred CC
Confidence 54
No 157
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.2e-40 Score=374.79 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=195.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.|+++|+++.|+... ..+|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996432 235999999999999999999999999999999999998 799999876
Q ss_pred -cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000553 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1428)
.|+||+|+|++|++|++||+....++++++..++++.++|+..+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999964445677888999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhccccCccc
Q 000553 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 830 (1428)
Q Consensus 752 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~~~~~~~~ 830 (1428)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....+..+
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~ 233 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQA 233 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHH
Confidence 999999999999999999877776 443 34578999999999999899999999999999999999998765444433
No 158
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=374.87 Aligned_cols=216 Identities=25% Similarity=0.406 Sum_probs=183.0
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999633 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCc--cccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|+||+| .++..|+++|+.+... .+..+..+ .+.+.++.+|+..........||||||||++|||||+++|
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p 157 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDP 157 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999998 6788999999975321 12111111 1222333335544455555689999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 158 DVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999998764 48999999999999865 8999999999999999997653
No 159
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=374.26 Aligned_cols=220 Identities=25% Similarity=0.468 Sum_probs=189.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+++.+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999744457999999999999999999999999999999999999999999999999998888788899999
Q ss_pred EEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|+||+| .++..|+++|+.+.. ..++++..+ .+.+.++.+|++..+.....+||+|||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999996531 123332221 1233445557776677777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+++
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999988643 48999999999999889999999999999999999987653
No 160
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=373.57 Aligned_cols=223 Identities=25% Similarity=0.390 Sum_probs=188.8
Q ss_pred CCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--
Q 000553 1187 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN-- 1259 (1428)
Q Consensus 1187 p~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~-- 1259 (1428)
|....|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34567999999999964 369999999999999999999999999999999999987 689999999999863
Q ss_pred CChHhHhcceEEEeCCccccCCcHHHhcCcCCC---CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1260 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1260 i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
.+...+|++++|+||+|.+|+.|+++|+.+... .. ++++.++++.++++. +++.........||+||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHH
Confidence 456778899999999999999999999975422 11 233444555554432 2233455566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeC-----------Ce
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GH 1401 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----------G~ 1401 (1428)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999987668999999999999876 899999996 67
Q ss_pred EEEecChhHHhccCC
Q 000553 1402 LVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1402 ive~g~p~eLl~~~~ 1416 (1428)
++|.|++++++.++.
T Consensus 242 ~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 242 LVEFNETKKIFNSPK 256 (269)
T ss_pred EEEeCCHHHHHhCcC
Confidence 999999999987553
No 161
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-40 Score=370.78 Aligned_cols=215 Identities=29% Similarity=0.424 Sum_probs=183.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC---hHhHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~~ 1268 (1428)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998776 4567889
Q ss_pred eEEEeCCccccC-CcHHHhcCcCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1269 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1269 i~~VpQdp~lf~-gTIR~NLdp~~~------------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
++++||++.+|+ .|+++|+..... .+++. .....+.++.+|++......+..||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEE------KQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHH------HHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999998887 599999964211 11110 11123344455776666777789999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999998864 37999999999999985 8999999999999999999974
Q ss_pred c
Q 000553 1413 Q 1413 (1428)
Q Consensus 1413 ~ 1413 (1428)
+
T Consensus 234 ~ 234 (241)
T cd03256 234 D 234 (241)
T ss_pred H
Confidence 3
No 162
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-39 Score=367.51 Aligned_cols=215 Identities=27% Similarity=0.422 Sum_probs=185.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EeCCcccc-CCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf-~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.++ ..|+++|+..... .+..+.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999874 5799999965321 1111111 1233455556787777777789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999998765 47999999999999988999999999999999999999875
No 163
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=374.32 Aligned_cols=219 Identities=25% Similarity=0.459 Sum_probs=188.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCc--cccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
|+||+| .+++.|+++|+..... .+.++..+ ...+.++.+||+..+......||||||||++|||||+.+|
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 4667899999975321 12222211 1223333346665566666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999987653 7899999999999999999999999999999999998764
No 164
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=382.89 Aligned_cols=220 Identities=24% Similarity=0.375 Sum_probs=187.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3889999999964 469999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEeCCccccCC-cHHHhcCcCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
||||++.+|+. |+++|+.+... .+.+++.+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975321 12222211 1233444446665566667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
++|++||||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++...|
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p~~~~ 232 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREPATRF 232 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccchH
Confidence 99999999999999999999999999988653 7899999999999876 89999999999999999999998776544
No 165
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=9.5e-40 Score=380.45 Aligned_cols=217 Identities=28% Similarity=0.415 Sum_probs=184.9
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
..|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999997755 4578999
Q ss_pred EEEeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+|+||+|.+|+ .|++||+.++.. .++.+..+. ..+.++.+|++........+||+|||||++|||||+++|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999886 599999975332 122222111 223344445554444455589999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++|+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999998864 47899999999999976 899999999999999999999764
No 166
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.6e-40 Score=385.27 Aligned_cols=209 Identities=26% Similarity=0.386 Sum_probs=180.1
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH----hcceEEEeCCccccCC
Q 000553 1206 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1281 (1428)
Q Consensus 1206 ~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lf~g 1281 (1428)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999988877 7899999999999985
Q ss_pred -cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCC
Q 000553 1282 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1357 (1428)
Q Consensus 1282 -TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~l 1357 (1428)
||++|+.+... .+.++..+ ...+.++.+||+...+..+.+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999964321 22222211 1223344447776777788899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1358 DAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1358 D~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
|+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999998764 38999999999998755 89999999999999999999998764444
No 167
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=374.83 Aligned_cols=218 Identities=28% Similarity=0.434 Sum_probs=186.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC--CCChHhHhcc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1268 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~ 1268 (1428)
.|+++||+++|++ .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 5899999999963 246999999999999999999999999999999999999999999999999984 3445678899
Q ss_pred eEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1269 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1269 i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
++|+||+| .+|+.|+++|+.... ..+.++.++. ..+.++.+|++........+||+|||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996421 1233222221 2233444566666667778999999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|+++++++.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999988753 7999999999999974 899999999999999999999864
No 168
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=364.50 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=180.7
Q ss_pred cEEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---H
Q 000553 1191 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1265 (1428)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cceEEEeCCccccCC-cHHHhcCcC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1266 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1266 R-~~i~~VpQdp~lf~g-TIR~NLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
| ++++|+||+|.+|++ |+++|+... .....++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999999876 999998642 1122221111 12344555577766677777899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecC
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~ 1407 (1428)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.++
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998763 4799999999999999999999999999998775
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.4e-39 Score=368.94 Aligned_cols=220 Identities=30% Similarity=0.397 Sum_probs=182.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1268 (1428)
|+++||+++|+. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 446889
Q ss_pred eEEEeCCccccC-CcHHHhcCcCCCCCh---HHHH---HHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1269 FAVVPQSPFLFE-GSLRDNLDPFHMNDD---LKIW---SVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1269 i~~VpQdp~lf~-gTIR~NLdp~~~~~d---~ei~---~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++++||++.+|+ .|+++|+........ ..+. ..-+.....+.++.+|++........+||||||||++|||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 160 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARAL 160 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHH
Confidence 999999998887 599999964211000 0000 000011223344455676666777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 161 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 161 AQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 99999999999999999999999999998764 37899999999999865 8999999999999999999974
No 170
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=371.25 Aligned_cols=224 Identities=24% Similarity=0.342 Sum_probs=186.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCC--CCChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~--~i~~~ 1263 (1428)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 5899999999964 4699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred hHhcceEEEeCCccccCC-cHHHhcCcCC---C--CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M--NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~g-TIR~NLdp~~---~--~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
.+|++++++||+|.+|++ |+++|+.... . ... +++.++++..++.+.+ .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 1 011 2233344443332111 12345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 8999999999999999999998
Q ss_pred ccCCcHHHH
Q 000553 1413 QDECSVFSS 1421 (1428)
Q Consensus 1413 ~~~~s~f~~ 1421 (1428)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14267 237 ENPEHELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 765433433
No 171
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=376.71 Aligned_cols=218 Identities=29% Similarity=0.432 Sum_probs=185.0
Q ss_pred EEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC----CChHh
Q 000553 1192 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1264 (1428)
++++|++++|++.. .++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 469999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000553 1265 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1265 lR~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1338 (1428)
.|++++||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||+ .........||||||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 688889999996431 1233332211 23344555775 334666778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999987643 7899999999999865 899999999999999999998764
No 172
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=371.41 Aligned_cols=222 Identities=27% Similarity=0.402 Sum_probs=186.9
Q ss_pred CCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--C
Q 000553 1188 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1260 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i 1260 (1428)
+.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999964 4699999999999999999999999999999999999975 89999999999875 3
Q ss_pred ChHhHhcceEEEeCCccccCCcHHHhcCcCCC---C--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000553 1261 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1331 (1428)
Q Consensus 1261 ~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~--~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1331 (1428)
+...+|++++++||+|.+|++|+++|+.+... . + ++++.++++.+++.+.+ ....+..+.+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 45678899999999999999999999964211 1 1 12233444444432211 123456677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999887667899999999999966 79999999999999999999
Q ss_pred HhccCC
Q 000553 1411 LLQDEC 1416 (1428)
Q Consensus 1411 Ll~~~~ 1416 (1428)
+..++.
T Consensus 249 ~~~~~~ 254 (267)
T PRK14235 249 MFTNPD 254 (267)
T ss_pred HHhCCC
Confidence 986543
No 173
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.2e-40 Score=375.61 Aligned_cols=218 Identities=26% Similarity=0.413 Sum_probs=191.6
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.|+..|++|+|.+||.|+..+|.+ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999997 45799999999999999999999999999999999999999999999999999999986 6789
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC----CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~----~~d~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
++|+|+..||+- ||++|+.++-. ..++ .+.++|+.+++. ..-......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~---------~~~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE---------GFADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch---------hhhhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999976533 2333 344555555544 44455667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
|..+|++|+||||-|+||.+-...+|.-+++.. .+.|.|+|||+-+.... +|||+||++|+|...|+|+|+..++.+
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~~ 230 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPAT 230 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcch
Confidence 999999999999999999999999998887653 38999999999998765 799999999999999999999999887
Q ss_pred HHH
Q 000553 1418 VFS 1420 (1428)
Q Consensus 1418 ~f~ 1420 (1428)
.|-
T Consensus 231 ~fV 233 (352)
T COG3842 231 RFV 233 (352)
T ss_pred HHH
Confidence 764
No 174
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.5e-39 Score=384.67 Aligned_cols=223 Identities=25% Similarity=0.409 Sum_probs=191.8
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC--ceEEECCeeCCCCChHhHh
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~--G~I~IDG~di~~i~~~~lR 1266 (1428)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999964 369999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cceEEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1267 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
+++++|+|++.+|+. ||++|+.+.- ..+++++.+ ...+.++.+||+........+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999987 9999997432 123333222 1233445557777677777899999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC---CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1418 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~---~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~ 1418 (1428)
++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.+++...
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p~~~ 233 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAPADG 233 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcCcH
Confidence 99999999999999999999999999987643 6899999999999866 8999999999999999999999887655
Q ss_pred HH
Q 000553 1419 FS 1420 (1428)
Q Consensus 1419 f~ 1420 (1428)
|-
T Consensus 234 ~~ 235 (362)
T TIGR03258 234 FA 235 (362)
T ss_pred HH
Confidence 53
No 175
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-40 Score=359.51 Aligned_cols=205 Identities=27% Similarity=0.353 Sum_probs=173.1
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
|++++++..|... ......+|+|+||+|++||+.+|+|.||+|||||+++|.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6788999888764 22334579999999999999999999999999999999999999999999987
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCCC----ChHHHHHHHHHh---cchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQSYSETLKAC---TLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~----~~~~~~~v~~~c---~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
+||+++|++-|++ .||.|||.|..+. .++..++|.+.+ +|.+. -+....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhH
Confidence 5999999999997 5999999997542 234444454444 44422 345567999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. ||++.+|++|+++|+|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986432223457799999999999987 999999999999999999887
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 230 F~ 231 (339)
T COG1135 230 FA 231 (339)
T ss_pred hc
Confidence 54
No 176
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.2e-39 Score=362.80 Aligned_cols=202 Identities=29% Similarity=0.394 Sum_probs=171.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1268 (1428)
++++|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999999776543 46889
Q ss_pred eEEEeCCccccC-CcHHHhcCcCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1269 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1269 i~~VpQdp~lf~-gTIR~NLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
++|+||+|.+|+ .|+++|+.... ... ++++.+++ +.+|++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l---------~~~~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAAL---------EKVGLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHH---------HHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 49999996421 111 12233334 44455554555566899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
|+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998764 47899999999999986 799999999975
No 177
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=368.02 Aligned_cols=226 Identities=26% Similarity=0.383 Sum_probs=188.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCCChHhH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i~~~~l 1265 (1428)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 4699999999999999999999999999999999999974 69999999999988888888
Q ss_pred hcceEEEeCCcccc-CCcHHHhcCcCCC-----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1266 RGRFAVVPQSPFLF-EGSLRDNLDPFHM-----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf-~gTIR~NLdp~~~-----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
|++++|+||+|.+| ..|+++|+.+... .. ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999765 5699999964211 01 12334444444432211 1234555668999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcC
Confidence 9999999999999999999999999999999999987678999999999999865 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000553 1415 ECSVFSSFV 1423 (1428)
Q Consensus 1415 ~~s~f~~l~ 1423 (1428)
+...+.+.+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14247 236 PRHELTEKY 244 (250)
T ss_pred CccHHHHHH
Confidence 554454433
No 178
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-39 Score=362.54 Aligned_cols=206 Identities=29% Similarity=0.447 Sum_probs=174.4
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999976543 4678999
Q ss_pred EeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||+|.+|+ .|+++|+..... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 599999964311 11111111 123444555776666666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998864 37899999999998876 8999999999998865
No 179
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-40 Score=352.51 Aligned_cols=191 Identities=31% Similarity=0.390 Sum_probs=162.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------cEEE
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 676 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------~i~y 676 (1428)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|.|...|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888864 3459999999999999999999999999999999999999999999976 5899
Q ss_pred EcCCCCCCcc-cHHHHHhcCCCCC-------hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000553 677 VPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1428)
Q Consensus 677 ~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1428)
|+|++-|+.- ||+|||.||-+.. +++.++.++..+|...-+..| ..||||||||||||||+
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHH
Confidence 9999988875 9999999986541 346777888888876555555 48999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeC--CeEE
Q 000553 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 812 (1428)
Q Consensus 749 y~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~--G~i~ 812 (1428)
..+|++|||||||+|||+.|..++.+.++.-....++|+++|||+++..- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998887744332345689999999998854 5999999998 4553
No 180
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=374.76 Aligned_cols=219 Identities=25% Similarity=0.370 Sum_probs=184.3
Q ss_pred cEEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC--------
Q 000553 1191 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN-------- 1259 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~-------- 1259 (1428)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997532 269999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHhHhcceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCc-
Q 000553 1260 ----------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE- 1317 (1428)
Q Consensus 1260 ----------------i~~~~lR~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLd- 1317 (1428)
.+...+|++++||||+| .+|..||++|+.+.. ..+.+++.+. ..+.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~ 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDE 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCCh
Confidence 13456789999999987 678889999997532 1233333221 22344445775
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEE
Q 000553 1318 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEIL 1395 (1428)
Q Consensus 1318 t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~ 1395 (1428)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||+
T Consensus 157 ~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 157 SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEE
Confidence 45667778999999999999999999999999999999999999999999998764 48999999999998765 89999
Q ss_pred EEeCCeEEEecChhHHhcc
Q 000553 1396 ILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1396 Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|++|++++.|+++++.++
T Consensus 237 vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 237 FFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEECCEEEEECCHHHHhcC
Confidence 9999999999999999875
No 181
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=9.4e-40 Score=364.15 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.3
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh----H
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1265 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~----l 1265 (1428)
|+++||+++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996531 46999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcceEEEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1266 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
|++++|+||+|.+|++ |+++|+..... ....+. ...+.+.++.+|++........+||||||||++|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999965321 111111 11234455556777767777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeE
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1402 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1402 (1428)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988754 7999999999999888999999999974
No 182
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=371.90 Aligned_cols=220 Identities=23% Similarity=0.379 Sum_probs=187.7
Q ss_pred cEEEEEEEEEECCC-CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1191 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999743 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+|+||+| .++..|+.+|+.+.. ..+++++.+. ..+.++.+|++.........||||||||++|||||+++
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~ 158 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALR 158 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 9999998 467789999997431 1233332211 12233333555455556678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++.
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (277)
T PRK13642 159 PEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATS 231 (277)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCH
Confidence 999999999999999999999999987653 79999999999999889999999999999999999998643
No 183
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.3e-39 Score=379.77 Aligned_cols=226 Identities=23% Similarity=0.386 Sum_probs=189.3
Q ss_pred cEEEEEEEEEECCC-----------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC
Q 000553 1191 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1259 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-----------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~ 1259 (1428)
.++++|++++|+.. ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2468999999999999999999999999999999999999999999999999998
Q ss_pred CChH---hHhcceEEEeCCc--cccC-CcHHHhcCc----CC-CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCC
Q 000553 1260 TPVR---DLRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1327 (1428)
Q Consensus 1260 i~~~---~lR~~i~~VpQdp--~lf~-gTIR~NLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~L 1327 (1428)
++.+ .+|++++||+|+| .+++ .||.+|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 8754 4678999999999 4774 699999852 11 1233333221 12344445663 3456677789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEE
Q 000553 1328 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVE 1404 (1428)
Q Consensus 1328 SgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1404 (1428)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999986 89999999999999
Q ss_pred ecChhHHhccCCcHHHH
Q 000553 1405 QGNPQTLLQDECSVFSS 1421 (1428)
Q Consensus 1405 ~g~p~eLl~~~~s~f~~ 1421 (1428)
.|+++++++++...|.+
T Consensus 243 ~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 243 LGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EcCHHHHHcCCCCHHHH
Confidence 99999999876545544
No 184
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-39 Score=366.21 Aligned_cols=220 Identities=22% Similarity=0.371 Sum_probs=187.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1269 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 469999999999999999999999999999999999999999999999999988776543 5679
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCCChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
+++||++.+|++ |+++|+....... ..+ ........+.+.++.+|++.........||||||||++||||+
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999999987 9999997532110 000 0001111234455555777767777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
+++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999987678999999999999976 89999999999999999999875
No 185
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-39 Score=366.01 Aligned_cols=216 Identities=25% Similarity=0.413 Sum_probs=185.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1270 (1428)
++++||+++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999988776553 57899
Q ss_pred EEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++||++.+|++ |+++|+..... ...++.. ..+.+.++.+|++........+||+|||||++||||++.+|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 1111111 123445555678777777778999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999998764 47899999999988776 899999999999999999998753
No 186
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.7e-39 Score=381.68 Aligned_cols=221 Identities=25% Similarity=0.444 Sum_probs=189.6
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
..++++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999964 4699999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++|+|++.+|+. ||++|+.+.-. .++.++.+ .+.+.++.+|++.........||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 22222211 1223344446666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+|++.|+|+++.+++...|
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~~~ 240 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLF 240 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 99999999999999999999999988653 7999999999999765 89999999999999999999998876555
No 187
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.7e-39 Score=371.26 Aligned_cols=227 Identities=26% Similarity=0.343 Sum_probs=189.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHhc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~ 1267 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999876543 4578
Q ss_pred ceEEEeCCccccCC-cHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1268 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~g-TIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
+++|+||++.+|++ |+++|+.+. ...+.++.. ....+.++.+|++.........||||||||++|||||+
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999987 999998642 111211111 11223344456665556666789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+++....
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~ 239 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANPDPRV 239 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCCcHHH
Confidence 99999999999999999999999999987643 7899999999999876 89999999999999999999987654444
Q ss_pred HHHHH
Q 000553 1420 SSFVR 1424 (1428)
Q Consensus 1420 ~~l~~ 1424 (1428)
+.++.
T Consensus 240 ~~~~~ 244 (269)
T PRK11831 240 RQFLD 244 (269)
T ss_pred HHHHH
Confidence 55543
No 188
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.5e-39 Score=364.55 Aligned_cols=227 Identities=26% Similarity=0.384 Sum_probs=189.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC--------h
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1262 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~--------~ 1262 (1428)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 4899999999964 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HhHhcceEEEeCCccccC-CcHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~-gTIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1337 (1428)
..+|++++++||+|.+|+ .|+++|+... .....++..+ ...+.++.+|++.........||||||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 467889999999999886 5999999642 1112211111 12345555677766677778999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
||||+.+|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 235 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFADP 235 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcCC
Confidence 999999999999999999999999999999998764 47899999999999976 8999999999999999999998654
Q ss_pred C-cHHHHHHH
Q 000553 1416 C-SVFSSFVR 1424 (1428)
Q Consensus 1416 ~-s~f~~l~~ 1424 (1428)
. ...+.++.
T Consensus 236 ~~~~~~~~~~ 245 (250)
T PRK11264 236 QQPRTRQFLE 245 (250)
T ss_pred CCHHHHHHHH
Confidence 3 23344443
No 189
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=9.7e-39 Score=364.77 Aligned_cols=221 Identities=23% Similarity=0.360 Sum_probs=186.9
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC--------
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-------- 1260 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i-------- 1260 (1428)
.+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 4699999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHhHhcceEEEeCCccccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCCh
Q 000553 1261 -----PVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1329 (1428)
Q Consensus 1261 -----~~~~lR~~i~~VpQdp~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSg 1329 (1428)
....+|++++|+||+|.+|++ |+++|+.... ...+.+.. ..+.+.++.+|++... +.....||+
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHcCCChhhhhCCcccCCH
Confidence 134678899999999999985 9999996421 11211111 1123445555776554 566778999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1330 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1330 GQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999987 89999999999999999
Q ss_pred hhHHhccCC
Q 000553 1408 PQTLLQDEC 1416 (1428)
Q Consensus 1408 p~eLl~~~~ 1416 (1428)
++++.+.+.
T Consensus 236 ~~~~~~~~~ 244 (257)
T PRK10619 236 PEQLFGNPQ 244 (257)
T ss_pred HHHhhhCcc
Confidence 999986543
No 190
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=348.10 Aligned_cols=196 Identities=29% Similarity=0.399 Sum_probs=167.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.+++++|+.+|+. ..||+||||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999976 5799999999999999999999999999999999999999999999999988432 45799
Q ss_pred EEeCCccccCC-cHHHhcCcCCCC---Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHMN---DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~~---~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
||+|++.||+- ||++|+...-+. +. +...+.|+.+ ||...-+..+..||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~V---------gL~~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELV---------GLAGFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHc---------CCcchhhcCccccChHHHHHHHHHHHHh
Confidence 99999999997 999998654222 11 2233444444 5555556677789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeC--CeE
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH--GHL 1402 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~--G~i 1402 (1428)
.+|+||+||||.++||..|...+|+-+.+.. .++||++|||+.+.... +|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887764 36999999999998665 799999999 555
No 191
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=368.27 Aligned_cols=223 Identities=27% Similarity=0.389 Sum_probs=185.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1263 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 5899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCC---CCh-----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~~d-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|+.++++||+|.+|++|+++|+.+... ..+ +++.++++.+++++. .....+....+||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKE-----TKDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcc-----hHHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975311 111 122333333333210 01234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++++|++|||||||++||+++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++...
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIA 236 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999876
Q ss_pred CCcHHH
Q 000553 1415 ECSVFS 1420 (1428)
Q Consensus 1415 ~~s~f~ 1420 (1428)
+.-.|.
T Consensus 237 ~~~~~~ 242 (251)
T PRK14251 237 PKKQIT 242 (251)
T ss_pred CCCHHH
Confidence 543343
No 192
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-39 Score=363.53 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=186.4
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC--ChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i--~~~~lR~~i 1269 (1428)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999764 345678899
Q ss_pred EEEeCCccccC-CcHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+|+||++.+|. .|+++|+.... ..+..+..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996431 112222111 123455556787777777789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999998764 47999999999999976 8999999999999999999998654
No 193
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=368.88 Aligned_cols=220 Identities=23% Similarity=0.377 Sum_probs=187.0
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1262 (1428)
..|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999953 469999999999999999999999999999999999997 579999999999864 345
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|+.++++||+|.+|++|+++|+.... ..++ +++.++++.+++.+.+ +...+..+..||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67789999999999999999999996531 1111 2233444444443221 234566777999999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++||||++++|++|||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999866 89999999999999999999987
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
.+.
T Consensus 252 ~~~ 254 (267)
T PRK14237 252 NPK 254 (267)
T ss_pred CCC
Confidence 543
No 194
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-38 Score=365.27 Aligned_cols=217 Identities=27% Similarity=0.379 Sum_probs=189.9
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
.+.|+++|++++. +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4579999999852 4699999999999999999999999999999999999999999999998 3
Q ss_pred eEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1269 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1269 i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865434445566778888888877766 67788888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHH-HHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1347 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~-i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
||||||||++||+++...+.+. ++...++.|||+|||+++.+..||+|++|++|++++.|+++++.+.. +.|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR-PDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc-hHHHHHH
Confidence 9999999999999999888764 45555689999999999999889999999999999999999998643 3455433
No 195
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.4e-39 Score=348.84 Aligned_cols=178 Identities=33% Similarity=0.566 Sum_probs=166.2
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975434699999999999999999999999999999999999999999999999998766 5678899999
Q ss_pred EeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
+||+|.+|++|+++|+ ..+||+|||||++||||++++|++||||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCeEEEec
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g 1406 (1428)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999998877789999999999999889999999999999865
No 196
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-39 Score=361.58 Aligned_cols=209 Identities=28% Similarity=0.442 Sum_probs=176.7
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 78999999997432 269999999999999999999999999999999999999999999999999976 345678899
Q ss_pred EEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+++||+|.+|++ |+++|+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985321 112222111 1233444456666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 47999999999999876 7999999999998865
No 197
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=384.22 Aligned_cols=220 Identities=28% Similarity=0.393 Sum_probs=187.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
||||++.+|+. |+++|+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999976 99999975321 22222111 12334444566665666667899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
+||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~~~ 229 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPANRF 229 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcccHH
Confidence 9999999999999999999999987643 7899999999998875 89999999999999999999998766544
No 198
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.5e-39 Score=361.46 Aligned_cols=207 Identities=25% Similarity=0.383 Sum_probs=175.7
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---Hh
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1266 (1428)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996432 46999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cceEEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1267 -GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1267 -~~i~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++++|+||+|.+|+ .|+++|+.... ..+..+.. + ...+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK---E--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH---H--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 59999996421 11211111 1 123455556777667777778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEE
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLV 1403 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~iv 1403 (1428)
+++|+||||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999889999999999986
No 199
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=374.22 Aligned_cols=226 Identities=25% Similarity=0.411 Sum_probs=187.1
Q ss_pred cEEEEEEEEEECCC--------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh
Q 000553 1191 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1262 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~ 1262 (1428)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999988864
Q ss_pred ---HhHhcceEEEeCCcc--ccCC-cHHHhcCc----CCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhH
Q 000553 1263 ---RDLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1331 (1428)
Q Consensus 1263 ---~~lR~~i~~VpQdp~--lf~g-TIR~NLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1331 (1428)
..+|+++++|||||. |++. ||.+|+.. .......+. +....+.++.+||+. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 356789999999994 5554 89888742 111122111 112234445556643 3456677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
|||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 8999999999999986 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000553 1409 QTLLQDECSVFSS 1421 (1428)
Q Consensus 1409 ~eLl~~~~s~f~~ 1421 (1428)
+++++++...|.+
T Consensus 240 ~~~~~~p~hpyt~ 252 (327)
T PRK11308 240 EQIFNNPRHPYTQ 252 (327)
T ss_pred HHHhcCCCCHHHH
Confidence 9999876555554
No 200
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=367.28 Aligned_cols=220 Identities=27% Similarity=0.413 Sum_probs=183.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcC---CCC--CCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl---~~~--~~G~I~IDG~di~~i--~~~ 1263 (1428)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 4699999999999999999999999999999999997 454 589999999999754 346
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCC---CC-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++|+||+|.+|++|+++|+.... .. .. +++.++++.+++.+. ++......+.+||||||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDE-----VKDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcc-----hhhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 11 11 123333333333211 12345666778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~ 235 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999999999988778999999999999865 899999999999999999999876
Q ss_pred CCc
Q 000553 1415 ECS 1417 (1428)
Q Consensus 1415 ~~s 1417 (1428)
+..
T Consensus 236 ~~~ 238 (250)
T PRK14245 236 PEK 238 (250)
T ss_pred CCC
Confidence 543
No 201
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.5e-39 Score=364.76 Aligned_cols=218 Identities=30% Similarity=0.487 Sum_probs=186.0
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC----------
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1261 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~---------- 1261 (1428)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHhHhcceEEEeCCccccC-CcHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1262 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1262 ---~~~lR~~i~~VpQdp~lf~-gTIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
...+|++++++||++.+|+ .|+++|+.... ....++..+ .+.+.++.+|++.........||+||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999886 69999996421 112211111 2344555557776677777889999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++.|++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987653 7899999999999965 89999999999999999999
Q ss_pred HhccCC
Q 000553 1411 LLQDEC 1416 (1428)
Q Consensus 1411 Ll~~~~ 1416 (1428)
+.+++.
T Consensus 234 ~~~~~~ 239 (252)
T TIGR03005 234 IFRQPK 239 (252)
T ss_pred HhcCCC
Confidence 987654
No 202
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-39 Score=371.48 Aligned_cols=220 Identities=28% Similarity=0.460 Sum_probs=188.7
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC---ceEEECCeeCCCCChHhHh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~---G~I~IDG~di~~i~~~~lR 1266 (1428)
+.|+++|++++|++...++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997544469999999999999999999999999999999999999987 8999999999887777889
Q ss_pred cceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1267 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1267 ~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++++|+||+| .+++.|+++|+.+.. ..+++++.+ ...+.++.+|++...+....+||+|||||++|||||
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999998 466789999997431 123322211 122334444666666667779999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|++++++.+
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999988653 7899999999999988999999999999999999998764
No 203
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-39 Score=371.96 Aligned_cols=218 Identities=30% Similarity=0.463 Sum_probs=185.1
Q ss_pred EEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----ChHh
Q 000553 1192 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1264 (1428)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000553 1265 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1265 lR~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1338 (1428)
+|++++|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++. ........||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 578899999996421 1223222211 233445557753 45666778999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 37899999999999876 899999999999999999998764
No 204
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-39 Score=365.94 Aligned_cols=220 Identities=29% Similarity=0.439 Sum_probs=185.3
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1262 (1428)
|.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~----~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+..+.+||+|||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964311 11 1223333444433221 1234456677899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999998876 89999999999999999999987
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
++.
T Consensus 235 ~~~ 237 (250)
T PRK14240 235 NPK 237 (250)
T ss_pred CCC
Confidence 654
No 205
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.8e-39 Score=354.50 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=178.5
Q ss_pred EEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1192 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
|+++||+++|++.. +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 4699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1269 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1269 i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++|+||+|.+|++|+++|+.+....++++.+++++.+++.+.+..+ |+++.+++.+..||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555566778888888988888877 88998988889999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH-HHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCe
Q 000553 1347 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1401 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~-~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1401 (1428)
+++|||||++||+++.+.+.+ .+++.. ++.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877766 566553 4689999999999999999999999985
No 206
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-39 Score=368.46 Aligned_cols=219 Identities=24% Similarity=0.412 Sum_probs=186.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|++..+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCcc-cc-CCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSPF-LF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp~-lf-~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++||+|. +| ..|+++|+..... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 44 5589999864311 12222111 1223344446655556667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++..+
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999988643 7899999999999988999999999999999999999765
No 207
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=367.56 Aligned_cols=223 Identities=23% Similarity=0.375 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCC--Ch
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i--~~ 1262 (1428)
..|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999963 4699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~~d~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
..+|+.++|+||++.+|+.|+++|+.... ..+.+ ++.++++.+++.+. ++.........||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDE-----TSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcc-----hhhhhcCChhhCCHHHHHHH
Confidence 56788999999999999999999996421 12222 23334444433211 12334556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+|+++.++
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887668999999999999876 899999999999999999999876
Q ss_pred CCcHH
Q 000553 1415 ECSVF 1419 (1428)
Q Consensus 1415 ~~s~f 1419 (1428)
+...+
T Consensus 244 ~~~~~ 248 (258)
T PRK14268 244 PREKS 248 (258)
T ss_pred CCCHH
Confidence 54433
No 208
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=373.23 Aligned_cols=221 Identities=24% Similarity=0.373 Sum_probs=185.4
Q ss_pred CccEEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC----C-
Q 000553 1189 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1260 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~----i- 1260 (1428)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47799999999996532 259999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHhHhcceEEEeCCc--cccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000553 1261 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1261 ~~~~lR~~i~~VpQdp--~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQr 1334 (1428)
+...+|++++|+||+| .+|+.|+++|+.+... ...++..+. +.+.++.+|++ ...+.....||+|||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 222222211 22344444773 45566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998764 37899999999998865 899999999999999999998
Q ss_pred hcc
Q 000553 1412 LQD 1414 (1428)
Q Consensus 1412 l~~ 1414 (1428)
.++
T Consensus 239 ~~~ 241 (289)
T PRK13645 239 FSN 241 (289)
T ss_pred hcC
Confidence 764
No 209
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=366.43 Aligned_cols=226 Identities=24% Similarity=0.406 Sum_probs=188.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1263 (1428)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++++||+|.+|+.|+++|+.... ...+ +++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997421 1111 2233344444432211 2335566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++++|+||||||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVER 235 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999999999987778999999999998765 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000553 1415 ECSVFSSFV 1423 (1428)
Q Consensus 1415 ~~s~f~~l~ 1423 (1428)
+...|.+.+
T Consensus 236 ~~~~~~~~~ 244 (250)
T PRK14262 236 PKNKLTEEY 244 (250)
T ss_pred CCChHHHHH
Confidence 544455443
No 210
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=367.24 Aligned_cols=221 Identities=26% Similarity=0.399 Sum_probs=184.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCCCC--hHh
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~i~--~~~ 1264 (1428)
-+++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcceEEEeCCccccCCcHHHhcCcCC---CC--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~--~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
+|++++|+||+|.+|++|+++|+.... .. . ++++.++++..++.+. +.+.++..+.+||+|||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-----LGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-----hhhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999986421 11 1 1223333333333211 11245566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKN 238 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999987
Q ss_pred CCcHH
Q 000553 1415 ECSVF 1419 (1428)
Q Consensus 1415 ~~s~f 1419 (1428)
+...+
T Consensus 239 ~~~~~ 243 (251)
T PRK14244 239 PQSSK 243 (251)
T ss_pred CCChH
Confidence 65544
No 211
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=368.68 Aligned_cols=220 Identities=27% Similarity=0.436 Sum_probs=184.1
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1262 (1428)
..|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 20 ~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 20 HILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred ceEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 36999999999964 469999999999999999999999999999999999865 789999999999865 344
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|++++|+||+|.+|++|+++|+.... ... ++.+.++++..++.+. +....+....+||||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qr 172 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQR 172 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHH
Confidence 56788999999999999999999986421 101 1223333433333211 1233456677899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++..
T Consensus 173 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 173 LCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999998875 89999999999999999999987
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
++.
T Consensus 253 ~~~ 255 (268)
T PRK14248 253 SPK 255 (268)
T ss_pred CCC
Confidence 643
No 212
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=366.16 Aligned_cols=219 Identities=22% Similarity=0.379 Sum_probs=183.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~--~---~~G~I~IDG~di~~i--~~~ 1263 (1428)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999964 369999999999999999999999999999999999953 6 499999999998653 345
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcC----CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~----~~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|+.++++||+|.+|+.|+++|+... +...+ +++.++++.+++.+. +....+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDE-----VKDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchh-----HHHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999998642 11111 223334444443221 12345566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999987667999999999998876 899999999999999999999876
Q ss_pred CC
Q 000553 1415 EC 1416 (1428)
Q Consensus 1415 ~~ 1416 (1428)
+.
T Consensus 238 ~~ 239 (252)
T PRK14239 238 PK 239 (252)
T ss_pred CC
Confidence 54
No 213
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6e-39 Score=382.50 Aligned_cols=220 Identities=26% Similarity=0.416 Sum_probs=189.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCccc-cCCcHHHhcCcCCC-----C---C---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000553 1271 VVPQSPFL-FEGSLRDNLDPFHM-----N---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1271 ~VpQdp~l-f~gTIR~NLdp~~~-----~---~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
++||++.+ |+.|+++|+..... . . ++.+.++++.++ +..........||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vg---------l~~~~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTG---------VAQFADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcC---------CchhhcCChhhCCHHHHHHHHHH
Confidence 99999987 56799999965321 1 1 223445555554 44334445568999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
|||+++|+||||||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||||++|++|++++.|+|++++..+
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~~- 230 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTAD- 230 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCcH-
Confidence 99999999999999999999999999999998875 47899999999999965 8999999999999999999998743
Q ss_pred cHHHHHH
Q 000553 1417 SVFSSFV 1423 (1428)
Q Consensus 1417 s~f~~l~ 1423 (1428)
.+.+++
T Consensus 231 -~l~~~~ 236 (402)
T PRK09536 231 -TLRAAF 236 (402)
T ss_pred -HHHHHh
Confidence 455544
No 214
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8.1e-39 Score=366.76 Aligned_cols=228 Identities=25% Similarity=0.383 Sum_probs=186.8
Q ss_pred cEEEEEEEEEECCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH
Q 000553 1191 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~ 1263 (1428)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 35799999999999999999999999999999999999999999999999999877654
Q ss_pred h---HhcceEEEeCCcc--ccC-CcHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000553 1264 D---LRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1332 (1428)
Q Consensus 1264 ~---lR~~i~~VpQdp~--lf~-gTIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQr 1332 (1428)
. +|++++|+||+|. +++ .|+++|+... .....++ ....+.+.++.+|++ ...+..+..||||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~ 156 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMVGLRSEDADKLPRQLSGGQL 156 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHcCCChhhhhCChhhCCHHHH
Confidence 3 6788999999983 443 6999998521 1111111 111233445555775 345667778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChh
Q 000553 1333 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1409 (1428)
Q Consensus 1333 Qrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~ 1409 (1428)
||++|||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 157 QRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987643 7899999999999985 8999999999999999999
Q ss_pred HHhccCCcHHHHHH
Q 000553 1410 TLLQDECSVFSSFV 1423 (1428)
Q Consensus 1410 eLl~~~~s~f~~l~ 1423 (1428)
+++..++...+.+.
T Consensus 237 ~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 237 QLLSFKHPAGRNLQ 250 (265)
T ss_pred HHcCCCCHHHHHHH
Confidence 99875442333343
No 215
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=366.65 Aligned_cols=221 Identities=24% Similarity=0.363 Sum_probs=186.6
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CC
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1261 (1428)
...++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999964 369999999999999999999999999999999999997 699999999999853 35
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCC---CCChH-----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~~d~-----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
...+|++++|+||+|.+|..|+++|+.+.. ..+++ .+.++++..++.+ ++....+..+..|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 567788999999999999999999996421 12221 1223333332211 2334456677789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887778999999999999876 8999999999999999999998
Q ss_pred ccCC
Q 000553 1413 QDEC 1416 (1428)
Q Consensus 1413 ~~~~ 1416 (1428)
.++.
T Consensus 255 ~~~~ 258 (271)
T PRK14238 255 SNPS 258 (271)
T ss_pred cCCC
Confidence 7654
No 216
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-39 Score=366.24 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=184.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1263 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 369999999999999999999999999999999999997 3 58999999999864 4456
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCC----CChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~----~~d~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++|+||+|.+|++|+++|+.+... .++++ +.++++..++.+.+ .......+.+||+|||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 77899999999999999999999964311 12222 22233333332111 2334566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++++|+||+|||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+|+++.++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 244 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSN 244 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 9999999999999999999999999999999999987678999999999999876 899999999999999999999876
Q ss_pred CCcH
Q 000553 1415 ECSV 1418 (1428)
Q Consensus 1415 ~~s~ 1418 (1428)
+...
T Consensus 245 ~~~~ 248 (259)
T PRK14274 245 PDDQ 248 (259)
T ss_pred CCCH
Confidence 5443
No 217
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-39 Score=356.76 Aligned_cols=202 Identities=30% Similarity=0.463 Sum_probs=174.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 778899999
Q ss_pred EeCCccccCC-cHHHhcCcCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~---~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||+|.+|.+ |+++|+.... ..+. +++.++++.. |++.........||+|||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV---------NLGDRAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC---------CCHHHHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 1121 2233444444 44433444556799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987767999999999999975 8999999999998865
No 218
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=364.80 Aligned_cols=222 Identities=23% Similarity=0.367 Sum_probs=184.9
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCceEEECCeeCCCC--C
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~--~---~~G~I~IDG~di~~i--~ 1261 (1428)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 4 689999999999754 3
Q ss_pred hHhHhcceEEEeCCccccC-CcHHHhcCcC----CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1332 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~-gTIR~NLdp~----~~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1332 (1428)
...+|++++++||++.+|+ .|+++|+... ...+. +++.++++.+++.+.+ +...+..+.+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567889999999999998 5999999642 11121 1223333333332211 1234456778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1333 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1333 Qrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
||++||||++++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999865 899999999999999999999
Q ss_pred hccCCc
Q 000553 1412 LQDECS 1417 (1428)
Q Consensus 1412 l~~~~s 1417 (1428)
..++.-
T Consensus 235 ~~~~~~ 240 (252)
T PRK14256 235 FTTPEK 240 (252)
T ss_pred HhCCCc
Confidence 876543
No 219
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-39 Score=368.23 Aligned_cols=221 Identities=25% Similarity=0.366 Sum_probs=183.2
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH----hcc
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1268 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~ 1268 (1428)
.++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 56688888864 469999999999999999999999999999999999999999999999999988765543 468
Q ss_pred eEEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
++|+||+|.+|+ .|+++|+.... .....+..+ ...+.++.+|++..+.....+||+|||||++|||||+++
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999885 59999996421 111111111 122344444665555666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++++...|.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~~~~ 257 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYV 257 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCcCcHHH
Confidence 99999999999999999999999998764 37999999999999865 899999999999999999999876654443
No 220
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-39 Score=368.17 Aligned_cols=218 Identities=26% Similarity=0.415 Sum_probs=185.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+.+ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999643 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|+..........||+|||||++|||||+.+|
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p 156 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEP 156 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 477889999996422 122222111 1223333445555555566789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhh-hcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++|||||||++||+.+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 157 ~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 157 QVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999987653 799999999999996 4899999999999999999999864
No 221
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.8e-39 Score=357.43 Aligned_cols=204 Identities=31% Similarity=0.469 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEE
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1272 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1272 (1428)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred eCCcc--ccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1273 PQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1273 pQdp~--lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
||+|. +++.|+++|+..... .++.+..+ ...+.++.+|++.........||||||||++|||||+++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 677899999965311 12221111 123344555776666677778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCe
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1401 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1401 (1428)
|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998764 47999999999999988 89999999985
No 222
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=362.18 Aligned_cols=217 Identities=24% Similarity=0.410 Sum_probs=182.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-Hhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1269 (1428)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 5899999999964 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+++||++.+|++ |+++|+..... .+..+..+. +.+.++.+ +++.........||+|||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999986 99999965321 122222211 12222223 24333444566899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+++++..+
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999998764 48999999999998765 899999999999999999999753
No 223
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-39 Score=367.49 Aligned_cols=217 Identities=28% Similarity=0.470 Sum_probs=185.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC-hHhHhcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~ 1270 (1428)
++++|++++|+++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 45999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEeCCcc--ccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp~--lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++||+|. +++.|+++|+.+... .+..+..+ .+.+.++.+|++.........||+|||||++|||||+++|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975321 12222211 1223344457766666777789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998754 48999999999999988999999999999999999998764
No 224
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=363.01 Aligned_cols=217 Identities=28% Similarity=0.444 Sum_probs=186.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-Hhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1269 (1428)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 4889999999964 46999999999999999999999999999999999999999999999999998877544 57889
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCC----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+++||++.+|++ |+++|+...... +.++. .....+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 12234556666887777777788999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999987754 48899999999987765 799999999999999999999764
No 225
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=378.89 Aligned_cols=223 Identities=27% Similarity=0.424 Sum_probs=190.1
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcc
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1268 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1268 (1428)
...++++|++++|+. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+.+. .|++
T Consensus 17 ~~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 17 TPLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred CceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 346999999999964 469999999999999999999999999999999999999999999999999987764 4778
Q ss_pred eEEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
++||+|++.+|+. ||+||+.+.- ..+..++.+ .+.+.++.+|++.........||||||||++|||||+++
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~ 167 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKR 167 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999999986 9999997532 122222221 123444555776666667778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
|++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++...|-
T Consensus 168 P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~~~~ 246 (377)
T PRK11607 168 PKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYS 246 (377)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCccHHH
Confidence 99999999999999999999988777653 37999999999998765 899999999999999999999988776554
No 226
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-39 Score=359.09 Aligned_cols=212 Identities=27% Similarity=0.431 Sum_probs=177.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 46999999999999999999999999999999999999999999999999987633 567889999
Q ss_pred EeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.++++ |+++|+.... ..+..+..+ ...+.++.+|++.........||||||||++||||++.+|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~l 152 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEV 152 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998876 9999996421 111111111 122333344555444555568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
|||||||++||+++.+.+.+.|++.. + ++|||+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 153 LFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999998764 2 7899999999999876 899999999999999998875
No 227
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=360.77 Aligned_cols=219 Identities=25% Similarity=0.394 Sum_probs=185.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC------CCChHh
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII------NTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~------~i~~~~ 1264 (1428)
.++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 46999999999999999999999999999999999999999999999999874 123456
Q ss_pred HhcceEEEeCCccccCC-cHHHhcCcC--C--CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~g-TIR~NLdp~--~--~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1339 (1428)
.|++++|+||+|.+|++ |+++|+..+ . ....++.. ....+.++.+|++..++....+||||||||++|||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lar 154 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIAR 154 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHH
Confidence 78899999999999976 999999631 1 11222211 12344555667877777777899999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
|++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.+.
T Consensus 155 al~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~~ 233 (242)
T PRK11124 155 ALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQPQT 233 (242)
T ss_pred HHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcCccc
Confidence 9999999999999999999999999999998764 48999999999999976 89999999999999999999875443
No 228
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-39 Score=376.14 Aligned_cols=226 Identities=19% Similarity=0.319 Sum_probs=182.7
Q ss_pred cEEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC----CCCceEEECCeeCCCCChHh
Q 000553 1191 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1264 (1428)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 479999999997532 359999999999999999999999999999999999997 48999999999999888766
Q ss_pred Hhc----ceEEEeCCcc--ccCC-cHHHhc----CcCCCCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChh
Q 000553 1265 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVG 1330 (1428)
Q Consensus 1265 lR~----~i~~VpQdp~--lf~g-TIR~NL----dp~~~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgG 1330 (1428)
+|+ ++++|||+|. +++. |+.+|+ ........++.. ....+.++.+||+ ..++..+..||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~gL~~~~~~l~~~p~~LSgG 157 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQVGIPDPASRLDVYPHQLSGG 157 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 543 6999999995 4432 665554 222111211111 1122333444553 3456677789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1331 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1331 QrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||+||++|+|+|.|+
T Consensus 158 q~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~ 237 (326)
T PRK11022 158 MSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGK 237 (326)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999998864 37899999999999964 89999999999999999
Q ss_pred hhHHhccCCcHHHH
Q 000553 1408 PQTLLQDECSVFSS 1421 (1428)
Q Consensus 1408 p~eLl~~~~s~f~~ 1421 (1428)
++++++++...|.+
T Consensus 238 ~~~~~~~p~hpyt~ 251 (326)
T PRK11022 238 AHDIFRAPRHPYTQ 251 (326)
T ss_pred HHHHhhCCCChHHH
Confidence 99999876555544
No 229
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-39 Score=369.97 Aligned_cols=219 Identities=28% Similarity=0.486 Sum_probs=184.6
Q ss_pred cEEEEEEEEEECCCC---CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----ChH
Q 000553 1191 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1263 (1428)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997432 4699999999999999999999999999999999999999999999999998653 245
Q ss_pred hHhcceEEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHH
Q 000553 1264 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~L 1337 (1428)
..|++++++||+| .+|+.|+++|+.+.. ..+.++..+ ...+.++.+|++ ........+||+|||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 577889999996321 122222211 123445555776 34566677999999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
||||+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFSD 235 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 47899999999999865 899999999999999999998764
No 230
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-39 Score=363.90 Aligned_cols=220 Identities=27% Similarity=0.383 Sum_probs=186.2
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CceEEECCeeCCCC--Ch
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~-----~G~I~IDG~di~~i--~~ 1262 (1428)
+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 3 PKIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred ceEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 36899999999964 46999999999999999999999999999999999999997 69999999998653 44
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCCC----CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~----~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|++++|+||+|.+|+.|+++|+.+... ... +.+.++++..++++.+ ....+..+.+||+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 577899999999999999999999975321 111 2233334444443322 234566777899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++|||||+++|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFS 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999887668999999999999987 69999999999999999999976
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
++.
T Consensus 236 ~~~ 238 (251)
T PRK14249 236 RPR 238 (251)
T ss_pred CCC
Confidence 543
No 231
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=366.26 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=186.4
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1262 (1428)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 4699999999999999999999999999999999999985 48999999999864 345
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|++++++||+|.+|+.|+++|+.+.. ..++ +.+.++++.+++.+.+ ....+..+..||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-----KDKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67788999999999999999999996421 1121 2234555555543322 223455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe-----CCeEEEecCh
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLVEQGNP 1408 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-----~G~ive~g~p 1408 (1428)
++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||++++|+ +|++++.|++
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987777999999999999976 79999997 5999999999
Q ss_pred hHHhccCCc
Q 000553 1409 QTLLQDECS 1417 (1428)
Q Consensus 1409 ~eLl~~~~s 1417 (1428)
+++.+++..
T Consensus 239 ~~~~~~~~~ 247 (259)
T PRK14260 239 TQIFSNPLD 247 (259)
T ss_pred HHHhcCCCC
Confidence 999876543
No 232
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=363.36 Aligned_cols=219 Identities=27% Similarity=0.401 Sum_probs=185.2
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCC--Ch
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i--~~ 1262 (1428)
..|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 3 IKMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred cEEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 36899999999964 4699999999999999999999999999999999999975 799999999999653 34
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCCC---C-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|++++|+||++.+|+.|+++|+.+... . +. +++.++++.+++.+.+ ....+.....||+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 155 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQR 155 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 567889999999999999999999974321 1 11 2233444444432211 223455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++||||++++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 156 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 235 (251)
T PRK14270 156 LCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIFL 235 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987767999999999999876 89999999999999999999986
Q ss_pred cC
Q 000553 1414 DE 1415 (1428)
Q Consensus 1414 ~~ 1415 (1428)
++
T Consensus 236 ~~ 237 (251)
T PRK14270 236 EP 237 (251)
T ss_pred CC
Confidence 54
No 233
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-39 Score=361.92 Aligned_cols=211 Identities=27% Similarity=0.422 Sum_probs=179.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-HhcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~ 1270 (1428)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 478999999974 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEeCCccccCC-cHHHhcCcCC-CC--ChHHHHHHHHHccHHHHHHhCC-CchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLKIWSVLEKCHVKEEVEAVG-LETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~-~~--~d~ei~~aL~~~~l~~~i~~lg-Ldt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++||++.+|++ |+++|+.... .. .+++. ..+.++.++ ++........+||||||||++|||||+++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~--------~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKI--------PDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHH--------HHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 9999996431 11 11111 112222222 444455666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999988653 7899999999999986 8999999999999999999983
No 234
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.1e-39 Score=372.87 Aligned_cols=216 Identities=28% Similarity=0.397 Sum_probs=183.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 4699999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
|+||++.+++ .|+++|+..+. ..+..+..+. +.+.++.+|++.........||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 1222222221 1223344466555555666899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998764 48899999999999976 899999999999999999999754
No 235
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=363.63 Aligned_cols=223 Identities=23% Similarity=0.392 Sum_probs=188.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~i--~~~ 1263 (1428)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.+++.. +..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 469999999999999999999999999999999999875 3899999999998753 466
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCC---CCCh-----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~~d-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++|+||+|.+|++|+++|+.... ...+ +++.++++.+++.+.+. ...+..+.+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-----DKLDKSALGLSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-----HHHhCCcccCCHHHHHHH
Confidence 7899999999999999999999996431 1111 22444555555544332 224556678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||+++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFIN 235 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999999887 799999999999999999999877
Q ss_pred CCcHHH
Q 000553 1415 ECSVFS 1420 (1428)
Q Consensus 1415 ~~s~f~ 1420 (1428)
+.+.+.
T Consensus 236 ~~~~~~ 241 (250)
T PRK14266 236 PKDKRT 241 (250)
T ss_pred CCChHH
Confidence 655443
No 236
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=366.00 Aligned_cols=222 Identities=28% Similarity=0.400 Sum_probs=187.5
Q ss_pred CCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--C
Q 000553 1188 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1260 (1428)
Q Consensus 1188 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i 1260 (1428)
..+.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3699999999999999999999999999999999999984 89999999999875 3
Q ss_pred ChHhHhcceEEEeCCccccCCcHHHhcCcCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000553 1261 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1332 (1428)
Q Consensus 1261 ~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~-~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1332 (1428)
+...+|++++|+||++.+|++|+++|+.+.. . .. ++++.++++.+++.+.+ .+..+..+.+||+|||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHH
Confidence 4567889999999999999999999996431 1 11 12234444444433221 1345566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHH
Q 000553 1333 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1333 Qrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..++.|+|++||+++.+.. ||||++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999875 899999999999999999999
Q ss_pred hccCC
Q 000553 1412 LQDEC 1416 (1428)
Q Consensus 1412 l~~~~ 1416 (1428)
.+++.
T Consensus 255 ~~~~~ 259 (272)
T PRK14236 255 FTSPA 259 (272)
T ss_pred hcCCC
Confidence 87543
No 237
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.9e-38 Score=372.41 Aligned_cols=226 Identities=25% Similarity=0.402 Sum_probs=185.3
Q ss_pred cEEEEEEEEEECC--CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC---CceEEECCeeCCCCChHhH
Q 000553 1191 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~---~G~I~IDG~di~~i~~~~l 1265 (1428)
.++++|++++|+. +...+++||||+|++||.+||+|+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 6999999999963 2246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cceEEEeCCc--cccC-CcHHHhcC----cCCCCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChhH
Q 000553 1266 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQ 1331 (1428)
Q Consensus 1266 R----~~i~~VpQdp--~lf~-gTIR~NLd----p~~~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQ 1331 (1428)
| ++|++||||| .+++ -|+.+|+. .....+.++..+ ...+.++.+||+ ..++..+..|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~-----~~~~~L~~vgL~~~~~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFE-----ESVRMLDAVKMPEARKRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCCChHHHhcCCcccCCHHH
Confidence 3 4799999999 4555 37777762 222222222211 112223333553 23566778899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
|||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|++
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhccCCcHHHH
Q 000553 1409 QTLLQDECSVFSS 1421 (1428)
Q Consensus 1409 ~eLl~~~~s~f~~ 1421 (1428)
+++.+++...|.+
T Consensus 247 ~~i~~~p~~pyt~ 259 (330)
T PRK09473 247 RDVFYQPSHPYSI 259 (330)
T ss_pred HHHHhCCCCHHHH
Confidence 9999877655554
No 238
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.1e-39 Score=360.27 Aligned_cols=211 Identities=26% Similarity=0.419 Sum_probs=176.1
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhHh
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1266 (1428)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cceEEEeCCc--ccc-CCcHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000553 1267 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1267 ~~i~~VpQdp--~lf-~gTIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1338 (1428)
++++|+||+| .++ ..|+++|+... ....+++..+ .+ ..+.++.+|++ ........+||+|||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~---~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARK---EA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHH---HH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 1111111111 10 12344555774 456777789999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
|||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988753 7899999999999985 8999999999998765
No 239
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=363.73 Aligned_cols=226 Identities=24% Similarity=0.383 Sum_probs=188.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1263 (1428)
.|+++|++++|++ +++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCCC----C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~----~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
..|++++|+||+|.+|++|+++|+.+.... . ++.+.++++.+++.+ ++.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-----EVKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-----hhHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 112333444433322 123345667778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFEN 238 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhC
Confidence 9999999999999999999999999999999999987777999999999999975 899999999999999999999876
Q ss_pred CCcHHHHHH
Q 000553 1415 ECSVFSSFV 1423 (1428)
Q Consensus 1415 ~~s~f~~l~ 1423 (1428)
+...+.+.+
T Consensus 239 ~~~~~~~~~ 247 (253)
T PRK14261 239 PHEELTENY 247 (253)
T ss_pred CCcHHHHHH
Confidence 544444443
No 240
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.3e-39 Score=354.47 Aligned_cols=198 Identities=27% Similarity=0.414 Sum_probs=168.8
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEE
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1272 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1272 (1428)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred eCCc--cccCCcHHHhcCcCCC-C--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1273 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1273 pQdp--~lf~gTIR~NLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
||+| .+|+.|++||+..+.. . .++++.++++.+ |++.........||||||||++|||||+++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL---------DLYALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc---------CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 122344444444 454444555568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhhhh-cCEEEEEeCCeEE
Q 000553 1348 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLV 1403 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~-~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1403 (1428)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 357899999999999976 8999999999985
No 241
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=367.69 Aligned_cols=219 Identities=26% Similarity=0.439 Sum_probs=185.1
Q ss_pred cEEEEEEEEEECCC----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC-hHhH
Q 000553 1191 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~-~~~l 1265 (1428)
.++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999743 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEeCCcc--ccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1266 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1266 R~~i~~VpQdp~--lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
|++++++||+|. +|..|+.+|+.+... .+..+..+ .+.+.++.+||+.........||+|||||++||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~lara 158 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGI 158 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 899999999984 676789999965321 12222111 12233344466555566667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHhcc
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|+++|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+..||||++|++|++++.|+++++..+
T Consensus 159 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 159 LAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999998764 38999999999999988999999999999999999999864
No 242
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=366.93 Aligned_cols=221 Identities=26% Similarity=0.420 Sum_probs=185.0
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCCC--C
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1261 (1428)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 37 ~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 37 ETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 346999999999964 469999999999999999999999999999999999997 6899999999998653 4
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCC---CCC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
...+|++++|+||++.+|++|+++|+.... ... ++++.++++..++.+.+ ....+....+||||||||+
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv 189 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRL 189 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHH
Confidence 567788999999999999999999996421 111 22344444444332111 1234566778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEE-EEeCCeEEEecChhHHhc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~-Vl~~G~ive~g~p~eLl~ 1413 (1428)
+|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+|+|+++.+.. |||++ +|++|+|++.|+++++.+
T Consensus 190 ~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~~ 269 (285)
T PRK14254 190 CIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIFE 269 (285)
T ss_pred HHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999999988777899999999999886 89975 579999999999999987
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
++.
T Consensus 270 ~~~ 272 (285)
T PRK14254 270 NPE 272 (285)
T ss_pred CcC
Confidence 543
No 243
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-39 Score=358.60 Aligned_cols=207 Identities=30% Similarity=0.374 Sum_probs=173.5
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
|+++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+++||+|.+|+ .|+++|+..... .+..+.. ....+.++.+|++........+||||||||++|||||+++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864211 1111111 11233444456665566666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEe--CCeEEEecCh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1408 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~g~p 1408 (1428)
++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998865 89999999 7999998764
No 244
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1e-38 Score=375.34 Aligned_cols=216 Identities=28% Similarity=0.425 Sum_probs=184.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
|+||++.+|. .|+++|+..+.. .+..+..+. ..+.++.+||+........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222211 1233443466555555566899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998864 48999999999999976 899999999999999999999764
No 245
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=363.83 Aligned_cols=219 Identities=24% Similarity=0.366 Sum_probs=186.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1263 (1428)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999964 369999999999999999999999999999999999986 479999999999853 4556
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCC---CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1337 (1428)
.+|++++++||+|.+|+.|+++|+.+... .. ++++.++++.+++.+.+. ...+..+.+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 77899999999999998999999975321 11 233444556555544332 23455667899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe---------CCeEEEecC
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQGN 1407 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~ive~g~ 1407 (1428)
||||+++|+||||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999987777899999999999876 79999998 899999999
Q ss_pred hhHHhccCC
Q 000553 1408 PQTLLQDEC 1416 (1428)
Q Consensus 1408 p~eLl~~~~ 1416 (1428)
++++.+++.
T Consensus 243 ~~~~~~~~~ 251 (264)
T PRK14243 243 TEKIFNSPQ 251 (264)
T ss_pred HHHHHhCCC
Confidence 999987654
No 246
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=364.48 Aligned_cols=223 Identities=23% Similarity=0.343 Sum_probs=190.1
Q ss_pred CCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCC--
Q 000553 1186 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1258 (1428)
Q Consensus 1186 wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~-- 1258 (1428)
-|..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 356788999999999964 3699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCChHhHhcceEEEeCCccccCCcHHHhcCcCCC---C-----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCC
Q 000553 1259 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1328 (1428)
Q Consensus 1259 --~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1328 (1428)
......+|++++|+||+|.+|++|+++|+..... . .++++.++++.+++.+ ++....+.....||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 2344677899999999999999999999964311 1 1244555666555432 22344556677899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1329 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1329 gGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
+|||||++|||||+++|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987667899999999999975 89999999999999999
Q ss_pred hhHHhccC
Q 000553 1408 PQTLLQDE 1415 (1428)
Q Consensus 1408 p~eLl~~~ 1415 (1428)
++++..++
T Consensus 244 ~~~~~~~~ 251 (265)
T PRK14252 244 TDTIFIKP 251 (265)
T ss_pred HHHHHhCC
Confidence 99997654
No 247
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-38 Score=371.48 Aligned_cols=215 Identities=27% Similarity=0.386 Sum_probs=187.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 34578899999
Q ss_pred EeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||+|.+|++ |++||+..+.. ...++..+ ...+.++.+|++........+||+|||||++|||||+++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123445555777777777789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|+|||||++||+.+.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999988778999999999999887 899999999999999999999764
No 248
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8.3e-39 Score=353.82 Aligned_cols=202 Identities=27% Similarity=0.407 Sum_probs=174.0
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|+ .|+++|+..+. ..+++++.++++..++ +.........||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGL---------KDSAKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCC---------HHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998875 69999996532 1234445555555544 4344445567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998764 47999999999999976 8999999999999865
No 249
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.4e-39 Score=355.66 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=174.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ++++++
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|+ .|+++|+.... ....++..+ .+.+.++.+|++.........||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999996531 112222111 122334445666666667778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37999999999999887 8999999999999876
No 250
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=343.30 Aligned_cols=203 Identities=25% Similarity=0.371 Sum_probs=172.1
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
|+++|++..|.. ..+++|+||+|++||+++++|||||||||+|+.|.+.++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 688999998863 3459999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCc-ccHHHHHhcCC---CCChH----HHHHHHHHhcchH-HHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 SIAYVPQVPWILS-GTIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~~~----~~~~v~~~c~l~~-di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
+||||-|+.-||. .||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 5999999999885 59999998743 35554 4555666667764 22 23456699999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+||||..+|+|+|+||||+||||-+++.+-+....-...-++|+|+||||++. +.-||+|.+|++|+|++.++++++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999988776432223347899999999987 56699999999999999999999986
Q ss_pred cc
Q 000553 823 SL 824 (1428)
Q Consensus 823 ~~ 824 (1428)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 53
No 251
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-38 Score=360.90 Aligned_cols=219 Identities=28% Similarity=0.419 Sum_probs=186.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCCC-hHh
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i~-~~~ 1264 (1428)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999964 4699999999999999999999999999999999999986 6999999999997653 456
Q ss_pred HhcceEEEeCCccccCCcHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1336 (1428)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+. ..+.++.+|++ +.+...+.+||+|||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV-----AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999997431 1233333221 12233333443 3456677789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+.+
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999887667899999999999876 8999999999999999999998765
Q ss_pred C
Q 000553 1416 C 1416 (1428)
Q Consensus 1416 ~ 1416 (1428)
.
T Consensus 254 ~ 254 (276)
T PRK14271 254 K 254 (276)
T ss_pred C
Confidence 3
No 252
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.4e-39 Score=355.94 Aligned_cols=205 Identities=31% Similarity=0.391 Sum_probs=171.7
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh---HhHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1268 (1428)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987654 357889
Q ss_pred eEEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
++++||+|.+|++ |+++|+.... ..+.++..+ .+.+.++.+|++........+||+|||||++|||||+++
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 9999999999985 9999996431 112111111 122333444565555555668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998763 58999999999999986 899999999974
No 253
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=363.22 Aligned_cols=216 Identities=25% Similarity=0.403 Sum_probs=184.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999988888888889999
Q ss_pred EeCCccccCC-cHHHhcCcCCC-----CC--hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM-----ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~-----~~--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||++.++++ |+++|+++... .. +.+. .....+.++.+|++.........||||||||++||||+++
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 155 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQ 155 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999998877 99999975311 00 0110 0112223333456555566677899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 156 DTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999998764 47999999999999876 899999999999999999998753
No 254
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.8e-38 Score=360.11 Aligned_cols=225 Identities=23% Similarity=0.386 Sum_probs=188.0
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCee-----CCCCChHh-
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1264 (1428)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 469999999999999999999999999999999999999999999999999 87776554
Q ss_pred ---HhcceEEEeCCcc--ccC-CcHHHhcCc----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000553 1265 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1265 ---lR~~i~~VpQdp~--lf~-gTIR~NLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1333 (1428)
.|+.++|+||+|. ++. .|+++|+.. +......++.+ ...+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 478888742 11111112211 234566666886 4677888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999985 89999999999999999999
Q ss_pred HhccCCcHHHHH
Q 000553 1411 LLQDECSVFSSF 1422 (1428)
Q Consensus 1411 Ll~~~~s~f~~l 1422 (1428)
+..++...|.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (258)
T PRK11701 239 VLDDPQHPYTQL 250 (258)
T ss_pred HhcCCCCHHHHH
Confidence 987665445543
No 255
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=364.96 Aligned_cols=213 Identities=27% Similarity=0.402 Sum_probs=183.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCccccCC-cHHHhcCcCCC--------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~--------~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
++||++.++.+ |+++|+..... . .++++.++++.+ |++........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV---------GLKPLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999964311 0 112334444444 454444555568999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|||+.+|+||||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMRG 238 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcCH
Confidence 99999999999999999999999999999998764 37999999999999965 899999999999999999998753
No 256
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2e-38 Score=357.65 Aligned_cols=215 Identities=28% Similarity=0.399 Sum_probs=182.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999986653 4788999
Q ss_pred EeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+++.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 1111111 1223445555665445556678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+||||||++||.++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++++.+
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999987643 7999999999999876 8999999999999999999998654
No 257
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=378.46 Aligned_cols=208 Identities=27% Similarity=0.400 Sum_probs=176.6
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH----hcceEEEeCCccccCC-
Q 000553 1207 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1281 (1428)
Q Consensus 1207 ~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lf~g- 1281 (1428)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876554 4689999999999975
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCC
Q 000553 1282 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1358 (1428)
Q Consensus 1282 TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD 1358 (1428)
|+++|+.+.. ..+.++..+ ...+.++.+||+........+||||||||++|||||+.+|+||||||||++||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 9999997432 112222111 12334444567666666777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1359 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1359 ~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++++.++...|
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999998764 48999999999999875 89999999999999999999988664433
No 258
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=364.68 Aligned_cols=217 Identities=26% Similarity=0.433 Sum_probs=182.4
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC--CChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1269 (1428)
|+++||+++|+. .+++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 2469999999999999999999999999999999999999999999999999853 2345678999
Q ss_pred EEEeCCc--cccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp--~lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+|+||+| .+|+.|+++|+.... ..+.++..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998 478889999996321 122222211 122334444565545555678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
|++|||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+.. ||||++|++|++++.|+++++++.
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998764 47999999999999885 899999999999999999999864
No 259
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.4e-38 Score=341.07 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.+.+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
++|+|.+|++|+++|+ ||+|||||++||||++++|++||||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCeE
Q 000553 1352 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1402 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1402 (1428)
|||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 48899999999999988999999999975
No 260
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=365.09 Aligned_cols=217 Identities=24% Similarity=0.352 Sum_probs=181.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC--CCChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~i 1269 (1428)
++++||+++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 46999999999999999999999999999999999999999999999999985 33456778899
Q ss_pred EEEeCCcc--ccCCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~--lf~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+|+||+|. ++..|+.+|+.... ..++++..+ .+.+.++.+|++.........||||||||++|||||+.+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999985 56779999986421 112222211 122233334554444555678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999998764 47899999999999966 8999999999999999999987643
No 261
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-36 Score=332.40 Aligned_cols=453 Identities=20% Similarity=0.279 Sum_probs=324.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccCChhhHHHHHhcChhhhhhhhhHHHHH
Q 000553 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1428)
Q Consensus 940 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1019 (1428)
.++.-|+++..+..+...+.......++.+.-.+++.++.++++.+|+.-+++...++++.++++|+..|.... ..+..
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHH
Confidence 34444444444445555556667788899999999999999999999999999999999999999999998332 33444
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHH
Q 000553 1020 LLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1099 (1428)
Q Consensus 1020 ~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~ 1099 (1428)
+.+.....+++.+.+++.+|.+..+.+..+++..+.+....+..-+--+...++...++.+++-.++|.+..+..+-..+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 66667777788888888888776655554444333322211111111111223345688999999999999887765443
Q ss_pred HH--HHHHHHHHHH----HHHH--------------HHHHHHHHHHHHHHH---HHHHHHHHHH---HHHHHHHHHHHHH
Q 000553 1100 FM--AKFKEHVVLY----QRTS--------------YSELTASLWLSLRLQ---VGLALSYAAP---IVSLLGNFLSSFT 1153 (1428)
Q Consensus 1100 ~~--~~~~~~~~~~----~~~~--------------~~~~~~~~wl~~~l~---~gl~l~~~~~---~~~~l~~~i~~~~ 1153 (1428)
.. +.+...-... .+.. +.......|+.+... ...+.++++. +-+.+.+++..++
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP 287 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILP 287 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhh
Confidence 32 2221111111 1111 111122233333322 2233333332 3356777888888
Q ss_pred HHHHHHHHHHHHHhhhcCCccccccCCCCCCCCCCCccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHH
Q 000553 1154 ETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1233 (1428)
Q Consensus 1154 ~~e~~~~sveRi~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKS 1233 (1428)
.+-++.+|..||.++...|+.+.-....+.++| ..||++||.|+|.+.. --+..||++|+.||.|=|+|.||||||
T Consensus 288 ~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~NGsGKS 363 (546)
T COG4615 288 TLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGGNGSGKS 363 (546)
T ss_pred HHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECCCCCcHH
Confidence 899999999999998764433221122233335 4699999999998653 457889999999999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHh
Q 000553 1234 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA 1313 (1428)
Q Consensus 1234 TL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~ 1313 (1428)
|++++|.|+|.|++|+|++||.+++.-++++.|+-++.|.-|-+||+.++ .|.+..+.+.+..-|++..+....+-
T Consensus 364 T~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrLel~~ktsl 439 (546)
T COG4615 364 TLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRLELAHKTSL 439 (546)
T ss_pred HHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999998765 34444566777766766655443221
Q ss_pred CCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHh--cCCcEEEEeccChhhhhhc
Q 000553 1314 VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE--CKGMTVITIAHRISTVLNM 1391 (1428)
Q Consensus 1314 lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~--~~~~TvI~IaHrl~ti~~~ 1391 (1428)
. |.... ...||-|||.|+++--|++-+.+|+++||=-+.-||.=.+...+.+-.. -.|+||+.|||+-.....+
T Consensus 440 ~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~A 515 (546)
T COG4615 440 N--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHA 515 (546)
T ss_pred c--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhH
Confidence 1 11111 1259999999999999999999999999999999999998887766433 2599999999999999999
Q ss_pred CEEEEEeCCeEEEe
Q 000553 1392 DEILILDHGHLVEQ 1405 (1428)
Q Consensus 1392 DrI~Vl~~G~ive~ 1405 (1428)
||++.|++|+++|.
T Consensus 516 Drll~~~~G~~~e~ 529 (546)
T COG4615 516 DRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHhcCceeec
Confidence 99999999999986
No 262
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-38 Score=319.99 Aligned_cols=211 Identities=26% Similarity=0.425 Sum_probs=181.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|.+++|.++|.. .+ =..+++|++||+|||+|+||||||||++++.|+..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999963 23 256899999999999999999999999999999999999999999999887764 467999
Q ss_pred EeCCccccCC-cHHHhcCcCC----CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~----~~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+.||.-||.- ||++|+..+- +. ..+.+..++.++|+..+.+ .-+..||||||||++|||+|+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~---------RLP~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLK---------RLPGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhh---------hCccccCchHHHHHHHHHHHhc
Confidence 9999999986 9999987542 22 2345667777777665543 3355799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
+.+||+||||.|+||+.-.+.+...+.+.+ ++.|+++|||.++.+.. +||++++++|||++.|+-+++++.++.
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~~ 223 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKAS 223 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCCh
Confidence 999999999999999999999998887765 58899999999999876 799999999999999999999987653
No 263
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=363.83 Aligned_cols=217 Identities=22% Similarity=0.346 Sum_probs=185.9
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 4699999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEeCCccccC-CcHHHhcCcCCC-C-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFHM-N-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~~-~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
+|+||++.+|. .|+++|+.+... . .+. ......+.++.+|++.........||+|||||++||||
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lara 157 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKE------DEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMV 157 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHH------HHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHH
Confidence 99999998875 599999975311 0 111 01112233344466555566677899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++++|++|||||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|+++++...
T Consensus 158 l~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 234 (265)
T PRK10253 158 LAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTA 234 (265)
T ss_pred HhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhhH
Confidence 999999999999999999999999999998764 37899999999998876 899999999999999999998753
No 264
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=361.05 Aligned_cols=224 Identities=26% Similarity=0.405 Sum_probs=185.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~-----~G~I~IDG~di~~--i~~~ 1263 (1428)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred hHhcceEEEeCCccccCC-cHHHhcCcCC---CC-ChHHHHH----HHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWS----VLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~g-TIR~NLdp~~---~~-~d~ei~~----aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
.+|++++|+||+|.+|++ |+++|+.... .. .+++..+ .++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999885 9999996321 11 2222222 2223332221 2223344566899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++|||||+++|+||||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|++++++.
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 236 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLFT 236 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987678999999999999986 89999999999999999999988
Q ss_pred cCCcHHHH
Q 000553 1414 DECSVFSS 1421 (1428)
Q Consensus 1414 ~~~s~f~~ 1421 (1428)
++...+.+
T Consensus 237 ~~~~~~~~ 244 (252)
T PRK14272 237 NPRDERTE 244 (252)
T ss_pred CcCcHHHH
Confidence 76544543
No 265
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=362.14 Aligned_cols=219 Identities=24% Similarity=0.417 Sum_probs=182.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1263 (1428)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 5899999999964 3699999999999999999999999999999999999974 69999999999853 4456
Q ss_pred hHhcceEEEeCCccccCC-cHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~g-TIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
.+|+.++++||++.+|+. |+++|+.... ..+. +.+.++++.+++.+.+ +........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 788999999999999974 9999986321 1111 2233334444332111 234556667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe------CCeEEEecC
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLVEQGN 1407 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~------~G~ive~g~ 1407 (1428)
++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.|+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667999999999999875 89999996 899999999
Q ss_pred hhHHhccCC
Q 000553 1408 PQTLLQDEC 1416 (1428)
Q Consensus 1408 p~eLl~~~~ 1416 (1428)
+++++.++.
T Consensus 237 ~~~~~~~~~ 245 (258)
T PRK14241 237 TEKIFSNPT 245 (258)
T ss_pred HHHHHhCcC
Confidence 999987543
No 266
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.9e-38 Score=375.26 Aligned_cols=209 Identities=25% Similarity=0.378 Sum_probs=174.7
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCe----eCCCCChHhH---h-cceEEEeCCccc
Q 000553 1207 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDL---R-GRFAVVPQSPFL 1278 (1428)
Q Consensus 1207 ~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~----di~~i~~~~l---R-~~i~~VpQdp~l 1278 (1428)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||. |+...+...+ | ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 6777665544 3 589999999999
Q ss_pred cC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000553 1279 FE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1354 (1428)
Q Consensus 1279 f~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaT 1354 (1428)
|+ .|+++|+.+.. ..+.++.. ....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 69999996432 11222111 11233444446665556666789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1355 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1355 S~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|.
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999987653 7999999999999865 899999999999999999999977644333
No 267
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=366.29 Aligned_cols=225 Identities=24% Similarity=0.342 Sum_probs=186.0
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCCC--C
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1261 (1428)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346999999999964 359999999999999999999999999999999999865 4999999999998643 3
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCC---CC-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~-~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
...+|++++|+||+|.+|++|+++|+.... .. +. +++.++++..++.+. +..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDE-----VSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccc-----hhhHhhCChhhCCHHHHH
Confidence 345788999999999999899999997431 11 11 123344444433211 122345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887667899999999999876 8999999999999999999998
Q ss_pred ccCCcHHH
Q 000553 1413 QDECSVFS 1420 (1428)
Q Consensus 1413 ~~~~s~f~ 1420 (1428)
+++...+.
T Consensus 270 ~~~~~~~~ 277 (286)
T PRK14275 270 TNPKDRMT 277 (286)
T ss_pred hCCCcHHH
Confidence 76554343
No 268
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=359.76 Aligned_cols=219 Identities=25% Similarity=0.377 Sum_probs=185.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCC-CCChHh
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~-~i~~~~ 1264 (1428)
.++++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999963 4699999999999999999999999999999999999986 5999999999985 456677
Q ss_pred HhcceEEEeCCccccCCcHHHhcCcCC---CCC-h----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000553 1265 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MND-D----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~gTIR~NLdp~~---~~~-d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1336 (1428)
+|+.++|+||+|.+|++|+++|+.... ... + +++.++++.+++.+. +..........||+|||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDE-----VKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchh-----hhHHhhcCcccCCHHHHHHHH
Confidence 889999999999999999999997431 111 1 122333444433221 123445666789999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 235 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFSNP 235 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcCC
Confidence 999999999999999999999999999999999988677999999999999887 8999999999999999999997654
Q ss_pred C
Q 000553 1416 C 1416 (1428)
Q Consensus 1416 ~ 1416 (1428)
.
T Consensus 236 ~ 236 (249)
T PRK14253 236 K 236 (249)
T ss_pred C
Confidence 3
No 269
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=361.38 Aligned_cols=220 Identities=24% Similarity=0.376 Sum_probs=186.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1269 (1428)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999963 469999999999999999999999999999999999999999999999999988776554 4569
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC-----------CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM-----------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~-----------~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1333 (1428)
+++||+|.+|++ |+++|+..... .. +.+..+.. ....+.++.+|++...+....+||+||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEAL--DRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHH--HHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 00000111 12334455568877777888899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999976 89999999999999999999
Q ss_pred Hhcc
Q 000553 1411 LLQD 1414 (1428)
Q Consensus 1411 Ll~~ 1414 (1428)
+..+
T Consensus 241 ~~~~ 244 (255)
T PRK11300 241 IRNN 244 (255)
T ss_pred HhhC
Confidence 8764
No 270
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=7.1e-36 Score=360.11 Aligned_cols=466 Identities=20% Similarity=0.235 Sum_probs=321.0
Q ss_pred HHHHhhhhhhhhhhhcccCCCC---CCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcc
Q 000553 912 QASRNGNDLWLSYWVDTTGSSQ---TKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 988 (1428)
Q Consensus 912 ~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ 988 (1428)
.+.....++|+..|.....+.- .......-+.+|.+++.+.......+.++......+.-..+-+.++++-+... .
T Consensus 56 ~l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~ 134 (604)
T COG4178 56 ILLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-R 134 (604)
T ss_pred HHHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-c
Confidence 3344455677777764321100 00111223567777777777777788888888888888888888888888777 4
Q ss_pred ccccCChh------hHHHHHhcChhhhhhhhhHHHHHHHHHHHHHHHHhhhHH--------------HHHH----HHHHH
Q 000553 989 FFDQTPGG------RILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLS--------------YVQV----FFLLL 1044 (1428)
Q Consensus 989 ff~~~~~G------~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~--------------~~~~----~~~~~ 1044 (1428)
||.....| ..=+|..+|+...-+..-.....++.++++++...+++. +..| |++++
T Consensus 135 ~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~ 214 (604)
T COG4178 135 YYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVII 214 (604)
T ss_pred hHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHH
Confidence 44332222 334688888877666544444555555554443333322 1111 11112
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHhhcchHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 1045 LVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL 1123 (1428)
Q Consensus 1045 ~~p~~-~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1123 (1428)
.+++. .+...+.+...+..-+..++|..-|.- ..-.-+....|-.|+-|+...++..+..+.-.+.+......+.
T Consensus 215 Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~----Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~ 290 (604)
T COG4178 215 YAISASLLTHLIGRPLIRLNFERQKLEADFRYS----LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQI 290 (604)
T ss_pred HHHHHHHHHHHHccccccccHHHHHHHHHHHHH----HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22221 222345555555555555555554432 3344566778888888887777666655555444444433333
Q ss_pred HH----------HHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----
Q 000553 1124 WL----------SLRLQ-----------------VGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV----- 1171 (1428)
Q Consensus 1124 wl----------~~~l~-----------------~gl~l~~~~~~~~~l~~~i~~~~~~e~~~~sveRi~~~~~~----- 1171 (1428)
++ +..+- +..+.....++...++|++..+.++..-...+.|+.++.+.
T Consensus 291 ~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~ 370 (604)
T COG4178 291 RLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQ 370 (604)
T ss_pred hhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 22211 22233445566778899999999999999999999998732
Q ss_pred -CccccccCCCCCCCCCC--CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCc
Q 000553 1172 -PQEELCGYQSLSPDWPF--QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1248 (1428)
Q Consensus 1172 -~~e~~~~~~~~~~~wp~--~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G 1248 (1428)
+++...... ..-..-. +..|+|+|++..-+++. ..|++.||.|+|||.+-|.|+||||||||+++|.|+.+--+|
T Consensus 371 ~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G 448 (604)
T COG4178 371 MDTEKPARTG-RRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSG 448 (604)
T ss_pred CcccccCccc-ccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCC
Confidence 222111100 0000001 57899999999987654 789999999999999999999999999999999999999999
Q ss_pred eEEECCeeCCCCChHhHhcceEEEeCCccccCCcHHHhcC-cCCC--CChHHHHHHHHHccHHHHHHhC-CCchhhhcCC
Q 000553 1249 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLD-PFHM--NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESG 1324 (1428)
Q Consensus 1249 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~gTIR~NLd-p~~~--~~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G 1324 (1428)
+|..-. -+++-++||.|.+-.||+||-|. |... ++|+|+.++|.+|||.+.++++ +.+. -+
T Consensus 449 ~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-W~--- 513 (604)
T COG4178 449 RISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-WD--- 513 (604)
T ss_pred ceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-Hh---
Confidence 987641 23589999999999999999984 4433 7899999999999999999987 3333 22
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeC
Q 000553 1325 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDH 1399 (1428)
Q Consensus 1325 ~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1399 (1428)
.-||+|||||+++||.+|++|++++||||||+||.+++..+.+.++++..++|||.|+||.....-.++.+-+++
T Consensus 514 ~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 514 RVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 359999999999999999999999999999999999999999999999999999999999887777777666543
No 271
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=360.23 Aligned_cols=217 Identities=26% Similarity=0.373 Sum_probs=183.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 46999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCccc-cCCcHHHhcCcCCC-C--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc----
Q 000553 1271 VVPQSPFL-FEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL---- 1342 (1428)
Q Consensus 1271 ~VpQdp~l-f~gTIR~NLdp~~~-~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL---- 1342 (1428)
++||++.+ +..|+++|+..... . ..++.. ....+.++.+|++.........||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~ 154 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDD-----ALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWE 154 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHH-----HHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccc
Confidence 99999987 56799999865321 1 111100 01223333345655555666789999999999999999
Q ss_pred --cCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1343 --KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1343 --~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
++|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 155 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (258)
T PRK13548 155 PDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLTP 231 (258)
T ss_pred cCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhCh
Confidence 5999999999999999999999999998764 47899999999999875 899999999999999999998763
No 272
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-38 Score=360.54 Aligned_cols=223 Identities=24% Similarity=0.342 Sum_probs=188.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCC--ChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1263 (1428)
.+.+++.+++|+. .++|+|+||+|+|||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 4699999999999999999999999999999999999986 799999999998643 445
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCCC------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1337 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1337 (1428)
.+|++++++||+|.+|..|+++|+.+.... .++++.++++.+++.+.+ +...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEV-----KDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHHHH
Confidence 678899999999999999999999754211 123455556655543322 123445667899999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe--------CCeEEEecCh
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLVEQGNP 1408 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~--------~G~ive~g~p 1408 (1428)
||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999988778899999999999876 89999996 8999999999
Q ss_pred hHHhccCCcHHH
Q 000553 1409 QTLLQDECSVFS 1420 (1428)
Q Consensus 1409 ~eLl~~~~s~f~ 1420 (1428)
+++++++...+.
T Consensus 241 ~~~~~~~~~~~~ 252 (261)
T PRK14263 241 AQIFQNPREQLT 252 (261)
T ss_pred HHHHhCCCcHHH
Confidence 999876543343
No 273
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=363.01 Aligned_cols=221 Identities=25% Similarity=0.364 Sum_probs=186.6
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCC--CC
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TP 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~--i~ 1261 (1428)
.-.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 347999999999964 3699999999999999999999999999999999999863 59999999999864 34
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCCC---C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---~---~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+.+ .......+..||||||||+
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHH
Confidence 4567899999999999998999999965321 1 123344455555543322 2234456678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEe---------CCeEEEe
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVEQ 1405 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~ive~ 1405 (1428)
+|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988778999999999999976 79999997 8999999
Q ss_pred cChhHHhccCC
Q 000553 1406 GNPQTLLQDEC 1416 (1428)
Q Consensus 1406 g~p~eLl~~~~ 1416 (1428)
|+++++..++.
T Consensus 251 g~~~~~~~~~~ 261 (274)
T PRK14265 251 SPTEQMFGSPQ 261 (274)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 274
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=368.12 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=185.7
Q ss_pred CccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCceEEECCeeCCCC--C
Q 000553 1189 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1261 (1428)
Q Consensus 1189 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1261 (1428)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 447999999999964 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHhHhcceEEEeCCccccCCcHHHhcCcCCC---------------C-----ChHHHHHHHHHccHHHHHHhCCCchhhh
Q 000553 1262 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---------------N-----DDLKIWSVLEKCHVKEEVEAVGLETFVK 1321 (1428)
Q Consensus 1262 ~~~lR~~i~~VpQdp~lf~gTIR~NLdp~~~---------------~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~ 1321 (1428)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+ +++..++
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-----EVNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-----hhhHHhc
Confidence 5678899999999999999999999974210 0 0122334444443322 1234556
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEE-EEEeC
Q 000553 1322 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1399 (1428)
Q Consensus 1322 e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI-~Vl~~ 1399 (1428)
..+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++..++.|+|+|+|+++.+.. |||| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 677899999999999999999999999999999999999999999999988777899999999999876 8997 56899
Q ss_pred CeEEEecChhHHhccC
Q 000553 1400 GHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1400 G~ive~g~p~eLl~~~ 1415 (1428)
|++++.|+++++.+++
T Consensus 276 G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 276 GELVEYDDTDKIFENP 291 (305)
T ss_pred CEEEEeCCHHHHHhCc
Confidence 9999999999998654
No 275
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.7e-38 Score=354.85 Aligned_cols=211 Identities=24% Similarity=0.320 Sum_probs=176.0
Q ss_pred ccEEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---
Q 000553 1190 GLIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD--- 1264 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~--- 1264 (1428)
..|+++|++++|+++. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 3699999999997532 35999999999999999999999999999999999999999999999999998877643
Q ss_pred H-hcceEEEeCCccccCC-cHHHhcCcC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000553 1265 L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1265 l-R~~i~~VpQdp~lf~g-TIR~NLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1339 (1428)
. +++++++||+|.+|++ |+++|+... ...+..+. ...+.+.++.+|++.........||+|||||++|||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~ 159 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALAR 159 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHH
Confidence 2 3679999999999885 999998642 11111111 111233444445655555566689999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEEe
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1405 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1405 (1428)
||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 160 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 160 AFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998764 27899999999999988999999999999874
No 276
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=357.84 Aligned_cols=204 Identities=28% Similarity=0.375 Sum_probs=175.7
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 45999999999964 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEeCCccccC-CcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+|+||+|.+|+ .|+++|+.+... ..++++.+++ +.+|++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l---------~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQAL---------AAVGLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHH---------HHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975321 1123333333 344565556666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChh
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1409 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~ 1409 (1428)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999998763 37999999999999865 8999999999999988754
No 277
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-38 Score=353.40 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=174.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. +++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999963 469999999999999999999999999999999999999999999999998753 46789999
Q ss_pred EeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|++ |+++|+..... .+..+. ...+.+.++.+|++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999886 99999864321 111111 11234455556777666777778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998764 47899999999999876 8999999999998865
No 278
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=355.26 Aligned_cols=216 Identities=27% Similarity=0.406 Sum_probs=183.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. +++++|+||+|+|||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 478999999974 369999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||+|.+|.+ |+++|+.+... .+..+.. ....+.++.+|++........+||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999976 99999864211 1111110 1123344445676666666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
+||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++.+.+.
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~~ 223 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEPA 223 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCCc
Confidence 999999999999999999999987643 8999999999999876 79999999999999999999987553
No 279
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=6.7e-38 Score=359.36 Aligned_cols=225 Identities=24% Similarity=0.362 Sum_probs=185.1
Q ss_pred cEEEEEEEEEECCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH
Q 000553 1191 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~ 1263 (1428)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 24699999999999999999999999999999999999999999999999999765666
Q ss_pred hHhcceEEEeCCcc--ccCC-cHHHhcCcC---C-CCCh----HHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000553 1264 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MNDD----LKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1331 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~--lf~g-TIR~NLdp~---~-~~~d----~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQ 1331 (1428)
..|++++|+||+|. +++. |+.+|+... + .... +++.++++ .+|++ ........+||+||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~~LS~G~ 154 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLR---------QVGLLPDHASYYPHMLAPGQ 154 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHH---------HcCCChHHHhcCchhcCHHH
Confidence 66778999999985 4544 888887531 1 1111 22333344 34553 22334456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
|||++|||||+++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 234 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGST 234 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999999999998864 37899999999999987 899999999999999999
Q ss_pred hHHhccCC-cHHHHHHH
Q 000553 1409 QTLLQDEC-SVFSSFVR 1424 (1428)
Q Consensus 1409 ~eLl~~~~-s~f~~l~~ 1424 (1428)
+++.+++. ..+++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 235 ADVLASPLHELTKRLIA 251 (267)
T ss_pred HHHhcCCCCHHHHHHHH
Confidence 99987653 34556665
No 280
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-38 Score=353.41 Aligned_cols=200 Identities=31% Similarity=0.421 Sum_probs=170.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1268 (1428)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 4699999999999999999999999999999999999999999999999999877643 46789
Q ss_pred eEEEeCCccccC-CcHHHhcCcCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1269 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1269 i~~VpQdp~lf~-gTIR~NLdp~~---~~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
++|+||+|.+|+ .|+++|+.... ... +++++++++. +|++........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQ---------VGLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---------cCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 59999986431 111 1233344444 355444444556899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCe
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1401 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1401 (1428)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998864 48999999999999987 89999999985
No 281
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=360.05 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=186.1
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CceEEECCeeCCC--CCh
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1262 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~-----~G~I~IDG~di~~--i~~ 1262 (1428)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 47999999999964 36999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HhHhcceEEEeCCccccCCcHHHhcCcCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000553 1263 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~gTIR~NLdp~~----~~~d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1334 (1428)
..+|+.++++||++.+|+.|++||+.... ..++ +++.++++.+++.+.+ +...+..+..||+|||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67789999999999999999999996421 1122 2234445554443222 223456667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeC-----CeEEEec
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLVEQG 1406 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----G~ive~g 1406 (1428)
++|||||+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998743 48999999999999876 799999999 9999999
Q ss_pred ChhHHhccCCc
Q 000553 1407 NPQTLLQDECS 1417 (1428)
Q Consensus 1407 ~p~eLl~~~~s 1417 (1428)
+|+++..++..
T Consensus 239 ~~~~~~~~~~~ 249 (261)
T PRK14258 239 LTKKIFNSPHD 249 (261)
T ss_pred CHHHHHhCCCC
Confidence 99999876554
No 282
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.3e-38 Score=350.95 Aligned_cols=207 Identities=27% Similarity=0.377 Sum_probs=173.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh---Hhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~ 1268 (1428)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999532 46999999999999999999999999999999999999999999999999998776543 6889
Q ss_pred eEEEeCCcccc-CCcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1269 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1269 i~~VpQdp~lf-~gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
++|+||+|.+| ..|+++|+.... ..++++..+. ..+.++.+|++.........||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999997531 1222222211 12233444665555666678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEE
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1404 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1404 (1428)
|++|||||||++||+++.+.+.+.|++.. ++.|+|+|||+++.+.. ||||++|++|+++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999998763 47899999999999987 79999999999863
No 283
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=371.55 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=183.8
Q ss_pred cEEEEEEEEEECC--CCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC----CCCceEEECCeeCCCCChHh
Q 000553 1191 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1264 (1428)
.++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22469999999999999999999999999999999999986 58999999999999888765
Q ss_pred Hh----cceEEEeCCcc--ccC-CcHHHhcCcC-------CC-CCh-HHHHHHHHHccHHHHHHhCCCch---hhhcCCC
Q 000553 1265 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-NDD-LKIWSVLEKCHVKEEVEAVGLET---FVKESGI 1325 (1428)
Q Consensus 1265 lR----~~i~~VpQdp~--lf~-gTIR~NLdp~-------~~-~~d-~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~ 1325 (1428)
++ ++|++|||+|. +++ .||.+|+... +. ..+ .+. +....+.++.+||+. .......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~gL~~~~~~~~~~p~ 157 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRVGIKDHKDAMRSFPY 157 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHCCCCChHHHHhCCch
Confidence 53 47999999996 333 4888887420 00 011 011 011233444445542 3456667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1326 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1326 ~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
.||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|
T Consensus 158 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~i 237 (330)
T PRK15093 158 ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQT 237 (330)
T ss_pred hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999988653 7999999999999976 899999999999
Q ss_pred EEecChhHHhccCCcHHHH
Q 000553 1403 VEQGNPQTLLQDECSVFSS 1421 (1428)
Q Consensus 1403 ve~g~p~eLl~~~~s~f~~ 1421 (1428)
+|.|+++++.+++...|.+
T Consensus 238 ve~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 238 VETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEECCHHHHHhCCCCHHHH
Confidence 9999999999876555654
No 284
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-38 Score=349.57 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=170.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EeCCccccCC-cHHHhcCcCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||+|.+|++ |+++|+.+.... .++++.++++.+ |++.........||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARV---------GLAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHc---------CCHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 999999753211 122334444444 55544555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998764 37899999999999976 8999999999998764
No 285
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-38 Score=350.73 Aligned_cols=201 Identities=25% Similarity=0.378 Sum_probs=171.7
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|.+|+|+. +++|+|+||++++|++++|+||||||||||||+|+|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999973 2359999999999999999999999999999999999999999999998
Q ss_pred -cEEEEcCCCCCCc-ccHHHHHhcCCC--------C---ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 -SIAYVPQVPWILS-GTIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~g~~--------~---~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.+||+||.+.... -||+|-+.+|+. . |.+...++++.+++++-. ...-.+||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 5999999986654 499999999852 1 334456668888776432 233458999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhcCCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|||.|||||+++|+|++||||||+||....-.+++.+..-...+|+|+|+|+||++. +.+||++++|++|++..+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 999999999999999999999999999999999987433223557899999999987 5679999999999999999998
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
|.+.
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8764
No 286
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-38 Score=358.79 Aligned_cols=222 Identities=25% Similarity=0.355 Sum_probs=185.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCceEEECCeeCCC--CChH
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1263 (1428)
.|+++||+++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 5899999999974 469999999999999999999999999999999999975 4 58999999999864 3445
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~---~-~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1335 (1428)
.+|++++|+||+|.+|+.|+++|+.... . .. ++++.++++.+++.+ ++..........||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-----EVKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-----chhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 1 11 122333444443321 123345566678999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||||++++|++|||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++.+...+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMFLN 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999887667899999999999976 899999999999999999999876
Q ss_pred CCcHH
Q 000553 1415 ECSVF 1419 (1428)
Q Consensus 1415 ~~s~f 1419 (1428)
+...+
T Consensus 238 ~~~~~ 242 (252)
T PRK14255 238 PKEKE 242 (252)
T ss_pred CCChH
Confidence 65433
No 287
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.5e-38 Score=350.47 Aligned_cols=208 Identities=25% Similarity=0.380 Sum_probs=182.1
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh----HhHhcc
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGR 1268 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~ 1268 (1428)
.+.|+.++|+++ .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999755 569999999999999999999999999999999999999999999999998876542 345678
Q ss_pred eEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1269 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1269 i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++|+||+|.+|+.|+++|+......++++..++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999875545566677888888888777665 78888888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH--HHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCe
Q 000553 1347 VLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1401 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~--~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1401 (1428)
||||||||++||..+.+.+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999887776 444432 3689999999999999999999999984
No 288
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.1e-38 Score=365.52 Aligned_cols=213 Identities=30% Similarity=0.504 Sum_probs=184.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++.+|+. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998665 678899999
Q ss_pred EEeCCccccCC-cHHHhcCcCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
|+||+|.+++. |++|||+++... .++.+.+.++..+ |+..-......||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~---------L~~~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFG---------LEDKANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcC---------CchhhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998876 999999865321 1234555555554 443223334579999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~-~-~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++...
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998865 4 799999999999998 999999999999999999998654
No 289
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.8e-38 Score=358.83 Aligned_cols=214 Identities=23% Similarity=0.339 Sum_probs=182.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EeCCcc-ccCCcHHHhcCcCCC--------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1272 VPQSPF-LFEGSLRDNLDPFHM--------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1272 VpQdp~-lf~gTIR~NLdp~~~--------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
+||+|. .+..|+++|+..+.. ..+++ ...+.+.++.+|++.........||+|||||++||||++
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~ 153 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHD------AAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALA 153 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHH------HHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHh
Confidence 999995 456799999965321 00110 011233344445554455566789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
.+|+++||||||++||+.+.+.+.+.|++.. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 154 QEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999998764 37899999999999965 89999999999999999999865
No 290
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.5e-38 Score=349.43 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=173.7
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC--CChHhHhcce
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1269 (1428)
++++||+++|+. .++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556778999
Q ss_pred EEEeCCccccC-CcHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
+|+||+|.+|+ .|+++|+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999887 59999996532 122222111 123445555777666777778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
|++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999976 899999999975
No 291
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=355.05 Aligned_cols=227 Identities=27% Similarity=0.390 Sum_probs=188.2
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECC------eeCCCCChH
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVR 1263 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG------~di~~i~~~ 1263 (1428)
..++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 46999999999964 4699999999999999999999999999999999999999997666655 677777777
Q ss_pred hHhcceEEEeCCccccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHH
Q 000553 1264 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQL 1334 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQr 1334 (1428)
.+|++++|+||+|.+|++ |+++|+.... ...++++++. +.+.++.+|++ ...+..+..||+|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 889999999999999986 9999997431 1122233221 22233333553 23455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1335 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1335 l~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
++||||++++|+++||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~~ 241 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIFT 241 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999999887778999999999999965 89999999999999999999988
Q ss_pred cCCcHHHHHH
Q 000553 1414 DECSVFSSFV 1423 (1428)
Q Consensus 1414 ~~~s~f~~l~ 1423 (1428)
++.-.+.+.+
T Consensus 242 ~~~~~~~~~~ 251 (257)
T PRK14246 242 SPKNELTEKY 251 (257)
T ss_pred CCCcHHHHHH
Confidence 7654455443
No 292
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.9e-38 Score=352.36 Aligned_cols=211 Identities=25% Similarity=0.347 Sum_probs=180.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCccccCCcHHHhcCcCCCC--ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1271 VVPQSPFLFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1271 ~VpQdp~lf~gTIR~NLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
++||+|.+|+.|+++|+...... .+.+ ...+.+.++.+|++ +.......+||+|||||++|||||+++|++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPD------PAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChH------HHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999642110 1100 01123444555774 456677789999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEe-CCeEEEecChh
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLVEQGNPQ 1409 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~-~G~ive~g~p~ 1409 (1428)
+||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999998864 3789999999999998899999995 66667778874
No 293
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=350.72 Aligned_cols=214 Identities=27% Similarity=0.444 Sum_probs=180.7
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+. .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 478999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|+ .|+++|+.... ..+..+..+ .+.+.++.+|+...+.....+||+|||||++||||++++|++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 150 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIER-----KVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKI 150 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999999886 69999996321 111111111 122333444555555666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
++|||||++||..+.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 151 lllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 151 LLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999988643 8999999999999886 8999999999999999999998764
No 294
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-38 Score=351.64 Aligned_cols=201 Identities=33% Similarity=0.457 Sum_probs=166.2
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEE
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1272 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1272 (1428)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 46999999999999999999999999999999999999999999999998874 468899999
Q ss_pred eCCccc---cCCcHHHhcCcCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1273 PQSPFL---FEGSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1273 pQdp~l---f~gTIR~NLdp~~~~-------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
||+|.+ |+.|+++|+...... ..++. .....+.++.+|++........+||||||||++|||||+
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~ 148 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALV 148 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHH
Confidence 999976 568999998643211 11111 011233344445555455566789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++| +++.|
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 149 QDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999998764 67899999999999976 7999999986 55544
No 295
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.8e-38 Score=346.57 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=182.1
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcCcEEEEcCCCCCCc
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 685 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~~i~y~~Q~p~l~~ 685 (1428)
++++|+++.|..... +...+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 368899999964210 0023699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCccccc
Q 000553 686 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 765 (1428)
Q Consensus 686 ~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD 765 (1428)
.|++||+.++..+++++..++.+.+++...+..+|.|.+|..++++.+||||||||++||||++.+|+++||||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 766 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 766 ~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
++..+.+++.++......++|+|++||+.+.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999898887644322234689999999999988899999999984
No 296
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=346.02 Aligned_cols=220 Identities=30% Similarity=0.424 Sum_probs=184.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCe---eCCCCChHhHhc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~---di~~i~~~~lR~ 1267 (1428)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++++.+ .+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 3778899888864 36899999999999999999999999999999999999999999999999 77774433 46
Q ss_pred ceEEEeCCccccC-CcHHHhcCcCCCC-----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1268 RFAVVPQSPFLFE-GSLRDNLDPFHMN-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~-gTIR~NLdp~~~~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
+||+|.||..||+ .||++||.++-+. ++.++. ....+.++-..|+-.-...+..||||||||+||||||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r-----~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARAL 152 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIR-----ARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARAL 152 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHH-----HHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHh
Confidence 7999999999987 4999999876422 222221 1222222222444444556778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcH
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSV 1418 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~ 1418 (1428)
...|++|+||||.++||.+-.+.+++-+++.. -++|+++|||+.+.+.. ||||+||++|+|...|+|+|....+++.
T Consensus 153 A~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s~ 232 (345)
T COG1118 153 AVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPASR 232 (345)
T ss_pred hcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCcc
Confidence 99999999999999999999999999988764 38999999999998876 8999999999999999999999988876
Q ss_pred H
Q 000553 1419 F 1419 (1428)
Q Consensus 1419 f 1419 (1428)
|
T Consensus 233 f 233 (345)
T COG1118 233 F 233 (345)
T ss_pred c
Confidence 6
No 297
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=350.30 Aligned_cols=209 Identities=24% Similarity=0.409 Sum_probs=178.3
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999876654 3578999
Q ss_pred EeCCccccCC-cHHHhcCcCC-CC---C---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFH-MN---D---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~-~~---~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||+|.+|++ |+++|+.... .. . ++++.++++. +|++..+......||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQ---------MGIEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHH---------cCcHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997421 11 1 1223334444 455555555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccC
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 9999999999999999999999999987643 7899999999999876 7999999999999999999998754
No 298
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-38 Score=331.70 Aligned_cols=220 Identities=27% Similarity=0.427 Sum_probs=187.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-Hhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1269 (1428)
.++++|++..|.. -.+|+||||++++||.++++||||+|||||+++|+|+.++.+|+|.++|.||...+.+. .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 4789999999976 36999999999999999999999999999999999999999999999999999998765 47789
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCC-ChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~-~d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++|||...+|+. ||.|||..+... .+++-++. .+.+..+-+ -|....+..+.+|||||+|.++|||||+.+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999976 999999754321 11111110 022222222 56666677788999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|+++||.++++
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999988764 5699999999998876 79999999999999999999998764
No 299
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.8e-38 Score=367.45 Aligned_cols=207 Identities=26% Similarity=0.400 Sum_probs=175.1
Q ss_pred EECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcccc
Q 000553 1200 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1279 (1428)
Q Consensus 1200 ~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1279 (1428)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 5643 469999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred CC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecccc
Q 000553 1280 EG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1355 (1428)
Q Consensus 1280 ~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS 1355 (1428)
++ |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||+++|++|||||||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEE-----RAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 86 99999975321 11111111 12334444566555556667899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1356 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1356 ~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999998864 47999999999999976 899999999999999999998764
No 300
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-38 Score=358.50 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=184.8
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC--------CceEEECCeeCCCCChH
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1263 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~--------~G~I~IDG~di~~i~~~ 1263 (1428)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999888888
Q ss_pred hHhcceEEEeCCcc-ccCCcHHHhcCcCCC-C-ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1264 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N-DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~-lf~gTIR~NLdp~~~-~-~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
.+|+.++++||++. +|+.|+++|+..... . ........-......+.++.+|+++.++.....||||||||++||||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lara 159 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQFARV 159 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHH
Confidence 88889999999986 578899999965321 0 00000000001112344455577777777778999999999999999
Q ss_pred Hc---------cCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1341 LL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1341 LL---------~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
|+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++
T Consensus 160 l~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (272)
T PRK13547 160 LAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAP 239 (272)
T ss_pred HhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99 59999999999999999999999999987643 7899999999999975 899999999999999999
Q ss_pred hHHhc
Q 000553 1409 QTLLQ 1413 (1428)
Q Consensus 1409 ~eLl~ 1413 (1428)
+++++
T Consensus 240 ~~~~~ 244 (272)
T PRK13547 240 ADVLT 244 (272)
T ss_pred HHHcC
Confidence 99875
No 301
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.9e-37 Score=353.41 Aligned_cols=221 Identities=26% Similarity=0.423 Sum_probs=182.0
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC----CCceEEECCeeCCCCChHhHh
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR 1266 (1428)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.+++. .+..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~--~~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP--CALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc--ccccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 99999999999863 22234
Q ss_pred cceEEEeCCcc-ccC--CcHHHhcCc----CC-CCChHHHHHHHHHccHHHHHHhCCCch---hhhcCCCCCChhHHHHH
Q 000553 1267 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1267 ~~i~~VpQdp~-lf~--gTIR~NLdp----~~-~~~d~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSgGQrQrl 1335 (1428)
+.++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+ |++. .++.....||+|||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAV---------GLENAARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHc---------CCCChhhhhhcCCcccCHHHHHHH
Confidence 67999999985 343 477777532 11 11233444444444 4443 45667778999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999999975 8999999999999999999998
Q ss_pred ccCCc-HHHHHHHh
Q 000553 1413 QDECS-VFSSFVRA 1425 (1428)
Q Consensus 1413 ~~~~s-~f~~l~~~ 1425 (1428)
+++.. .++.++..
T Consensus 230 ~~~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NAPKHAVTRSLVSA 243 (254)
T ss_pred hCCCCHHHHHHHHh
Confidence 76544 45555543
No 302
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-38 Score=331.61 Aligned_cols=204 Identities=31% Similarity=0.407 Sum_probs=174.5
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
...|+++++++++.. +.+++|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 567999999999853 3459999999999999999999999999999999999999999999986
Q ss_pred ------cEEEEcCCCCCCcc-cHHHHHhcC----CCCChHHHH----HHHHHhcchHH-HhcccCCCcccccCCCCccch
Q 000553 673 ------SIAYVPQVPWILSG-TIRDNILFG----KNYDPQSYS----ETLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 ------~i~y~~Q~p~l~~~-ti~~nI~~g----~~~~~~~~~----~v~~~c~l~~d-i~~l~~gd~t~ig~~g~~LSG 736 (1428)
++|+++|+--||+. ||+||+.|. ...+++.++ .-+++++|..+ .+.+|. .|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~Ps-----------ELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPS-----------ELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCch-----------hhcc
Confidence 59999999999987 999999995 234554444 34678899887 666664 8999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEe
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 814 (1428)
|.+.|+|||||+..||+|+++|||||+|||.++..+- .++... ..-+-|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~-~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVID-ELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHH-HHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 9999999999999999999999999999999777544 434321 1236799999999998765 899999999999999
Q ss_pred cChHHHHhcc
Q 000553 815 GSSADLAVSL 824 (1428)
Q Consensus 815 g~~~el~~~~ 824 (1428)
|+++|+.+.+
T Consensus 228 Gt~~el~~sd 237 (263)
T COG1127 228 GTPEELLASD 237 (263)
T ss_pred CCHHHHHhCC
Confidence 9999997654
No 303
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.5e-38 Score=317.72 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=171.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
+.++++.|+|... + -..+++|++||+++|+|||||||||||++|.|+..|.+|+|.++| .+
T Consensus 2 l~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPV 73 (231)
T COG3840 2 LALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPV 73 (231)
T ss_pred ccccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCCh
Confidence 4567788888642 2 246799999999999999999999999999999999999999987 49
Q ss_pred EEEcCCCCCCcc-cHHHHHhcCCC-------CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHH
Q 000553 675 AYVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1428)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1428)
++++|+..||.- ||++||-+|.. .+.++.+.++...+|....+.+|. +|||||||||||||
T Consensus 74 SmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALAR 142 (231)
T COG3840 74 SMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALAR 142 (231)
T ss_pred hhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHH
Confidence 999999999976 99999999853 356778888888999988888886 89999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHhc
Q 000553 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 747 aly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
++.++.+|++||||||||||.-......-+..-...++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 143 clvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 143 CLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999988877664221113467799999999998765 999999999999999999888643
No 304
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-38 Score=325.67 Aligned_cols=217 Identities=26% Similarity=0.417 Sum_probs=188.0
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||.|+..-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 688999999976 334899999999999999999999999999999999999999999999999997754 567999999
Q ss_pred EeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
++-+.-++.. |+||||.+|+. .++.++. +.+.+..+.++++..+..+-.+||-|+|||++|||||.++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 9977777754 99999988753 2333332 2233444555666666666668999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhhh-hcCEEEEEeCCeEEEecChhHHhccC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVL-NMDEILILDHGHLVEQGNPQTLLQDE 1415 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~-~~TvI~IaHrl~ti~-~~DrI~Vl~~G~ive~g~p~eLl~~~ 1415 (1428)
++||||||+||.-+.+.+++.|++... +++||+-+|.++.++ -||||+++.+|+++..|+++++.++.
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999988764 999999999999999 59999999999999999999998754
No 305
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8.7e-38 Score=354.37 Aligned_cols=215 Identities=20% Similarity=0.292 Sum_probs=177.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCceEEECCeeCCCCChHhH-hcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~--~~~~G~I~IDG~di~~i~~~~l-R~~ 1268 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 478999999963 46999999999999999999999999999999999994 7999999999999988776554 456
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCC----------CChHHHHHHHHHccHHHHHHhCCCchh-hhcCCC-CCChhHHHHH
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGI-SFSVGQRQLI 1335 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~----------~~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~-~LSgGQrQrl 1335 (1428)
++++||+|.+|++ |+++|+..... .+.++.. + .+.+.++.+|++.. ...... .||+|||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL---K--LLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH---H--HHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999987 89999853210 0111111 1 12344445577543 333333 4999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh--cCEEEEEeCCeEEEecChhHHh
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 99999999999999999999999999999999998864 47899999999999986 7999999999999999998654
Q ss_pred c
Q 000553 1413 Q 1413 (1428)
Q Consensus 1413 ~ 1413 (1428)
.
T Consensus 234 ~ 234 (243)
T TIGR01978 234 E 234 (243)
T ss_pred c
Confidence 3
No 306
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-38 Score=358.51 Aligned_cols=203 Identities=32% Similarity=0.412 Sum_probs=175.4
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------c
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~ 673 (1428)
.|+++|++..|.+. . +++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 57899999998642 1 59999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCCCC-------hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
||+|+|+.-|+.. ||+|||.||.... +++.+++.+..++++-++..| ..||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHH
Confidence 9999999998865 9999999986542 467788888888888776655 48999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhcc
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSL 824 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~~ 824 (1428)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.||||..... -||+|++|++|+|.+.|++.|+....
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999998887766532211234679999999987754 59999999999999999999997543
No 307
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.5e-37 Score=356.38 Aligned_cols=231 Identities=22% Similarity=0.329 Sum_probs=189.7
Q ss_pred cEEEEEEEEEECCC-------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-
Q 000553 1191 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1262 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~- 1262 (1428)
.|+++||+++|+.+ .+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 48999999999741 3579999999999999999999999999999999999999999999999999987765
Q ss_pred --HhHhcceEEEeCCcc--ccC-CcHHHhcCcC-CCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000553 1263 --RDLRGRFAVVPQSPF--LFE-GSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1335 (1428)
Q Consensus 1263 --~~lR~~i~~VpQdp~--lf~-gTIR~NLdp~-~~~~d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl 1335 (1428)
..+|+.++++||++. +++ .|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 346889999999983 443 5999997431 10000 001111223455666668874 56777789999999999
Q ss_pred HHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1336 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1336 ~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999987643 7899999999999986 8999999999999999999998
Q ss_pred ccCCcHHHHHHH
Q 000553 1413 QDECSVFSSFVR 1424 (1428)
Q Consensus 1413 ~~~~s~f~~l~~ 1424 (1428)
.. ++.|..-+.
T Consensus 241 ~~-~~~~~~~~~ 251 (268)
T PRK10419 241 TF-SSPAGRVLQ 251 (268)
T ss_pred CC-CCHHHHHHH
Confidence 64 445544443
No 308
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.2e-37 Score=353.71 Aligned_cols=213 Identities=38% Similarity=0.661 Sum_probs=192.1
Q ss_pred CCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcCcEEEEcCC
Q 000553 601 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQV 680 (1428)
Q Consensus 601 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~~i~y~~Q~ 680 (1428)
+.+..++++|+++.+ . .+|+|+||++++|++++|+|+||||||||+++|+|.++|.+|+|.++|.|+|++|+
T Consensus 35 ~~~~~l~i~nls~~~-----~---~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~ 106 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----A---PVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQF 106 (282)
T ss_pred CCCCeEEEEEEEEec-----c---cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCc
Confidence 345679999999952 1 25999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCC
Q 000553 681 PWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 760 (1428)
Q Consensus 681 p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep 760 (1428)
+++++.|++||+.++..+++.++..+++++++...+..+|.+.++.+++++.+||||||||++||||++.+|+++|||||
T Consensus 107 ~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEP 186 (282)
T cd03291 107 SWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSP 186 (282)
T ss_pred ccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999999999999866666677788888999888999999998999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 761 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 761 ~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|++||+.+.+.+.+.++.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 187 t~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 187 FGYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred CccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999988887754322 345789999999999998999999999999999999988764
No 309
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=354.07 Aligned_cols=205 Identities=28% Similarity=0.363 Sum_probs=173.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|+ .|+++|+.... .....+.. ....+.++.+|++........+||||||||++|||||+++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 11221111 1233445555676656666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEe--CCeEEEecCh
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVEQGNP 1408 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~ive~g~p 1408 (1428)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999998863 48999999999999876 89999998 5999998754
No 310
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.5e-38 Score=350.17 Aligned_cols=212 Identities=27% Similarity=0.378 Sum_probs=173.5
Q ss_pred EEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCCceEEECCeeCCCCChHhHh
Q 000553 1192 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR 1266 (1428)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3689999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cceEEEeCCccccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1267 GRFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~-~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
++++++||++.+|++ |+++|+.+... ..........+.....+ .++.++++.........||+|||||++|||||++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 99999974311 00000011111111122 3444466655556667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccCh-hhhh-hcCEEEEEeCCeEEEec
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STVL-NMDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl-~ti~-~~DrI~Vl~~G~ive~g 1406 (1428)
+|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|++ +.+. .||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 4554 58999999999999875
No 311
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=340.20 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=169.1
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------c
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 673 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------~ 673 (1428)
..|+++|++|.|... + +|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| +
T Consensus 3 ~~i~v~nl~v~y~~~---~---vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR---P---VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE---e---eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 368999999999742 2 49999999999999999999999999999999999999999999865 5
Q ss_pred EEEEcCCC---CCCcccHHHHHhcCCCC-----------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 674 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 674 i~y~~Q~p---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
||||||.. |-|..||+|-+.+|... |.+..+++++..++. |+. ...-.+|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999965 77889999999988432 346777888888876 333 223347999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|||-|||||.++||+|+|||||+++|+.++..+++- +.....+|+||++||||++.+. ++|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999988875 3332334899999999999876 599999995 5678889988
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
+..+
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 312
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-37 Score=336.30 Aligned_cols=195 Identities=28% Similarity=0.361 Sum_probs=160.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|++-.|...... ..+|+++||+|++||+++|+|||||||||||+.|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~ 79 (226)
T COG1136 2 IELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAK 79 (226)
T ss_pred cEEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHH
Confidence 3567777777654322 4579999999999999999999999999999999999999999999886
Q ss_pred ----cEEEEcCCCCCCc-ccHHHHHhcC----CCCC---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHH
Q 000553 673 ----SIAYVPQVPWILS-GTIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1428)
Q Consensus 673 ----~i~y~~Q~p~l~~-~ti~~nI~~g----~~~~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 740 (1428)
+|||++|+..|.. -|++|||.+. .... .++.+..++..+|.+... ..+...|||||||
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQ 149 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQ 149 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHH
Confidence 4999999998765 5999999853 2221 345555666666654433 2345689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 741 RvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
|||||||++.+|++++.||||.+||.++++.|++.+......+|+|+|+|||+.+....|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999863322134578999999999999999999999999854
No 313
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.5e-37 Score=352.58 Aligned_cols=226 Identities=22% Similarity=0.358 Sum_probs=187.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCee-----CCCCChHh-
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1264 (1428)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 5899999999964 358999999999999999999999999999999999999999999999988 77666543
Q ss_pred ---HhcceEEEeCCcc--cc-CCcHHHhcCc----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000553 1265 ---LRGRFAVVPQSPF--LF-EGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1333 (1428)
Q Consensus 1265 ---lR~~i~~VpQdp~--lf-~gTIR~NLdp----~~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1333 (1428)
+++.++++||+|. ++ ..|+.+|+.. .......+. ...+.+.++.+|++ +..+.....|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 22 3588888731 111111111 12344566667886 5677788899999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|++++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999986 89999999999999999999
Q ss_pred HhccCCcHHHHHH
Q 000553 1411 LLQDECSVFSSFV 1423 (1428)
Q Consensus 1411 Ll~~~~s~f~~l~ 1423 (1428)
+..++...|.+++
T Consensus 236 ~~~~~~~~~~~~~ 248 (253)
T TIGR02323 236 VLDDPQHPYTQLL 248 (253)
T ss_pred HhcCCCCHHHHHH
Confidence 9876655555544
No 314
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-37 Score=367.19 Aligned_cols=212 Identities=24% Similarity=0.368 Sum_probs=181.2
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----ChHhHhc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1267 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1267 (1428)
|++ |++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998653 2445678
Q ss_pred ceEEEeCCccccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1268 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+++|+||++.+|+. |+++|+.+... ..++++.+ .++.+|++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~---------~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDK---------IVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHH---------HHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999975 99999975422 12233333 344446666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 99999999999999999999999987653 7899999999998876 899999999999999999999988753
No 315
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.1e-37 Score=343.72 Aligned_cols=201 Identities=22% Similarity=0.378 Sum_probs=170.9
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++||+++|+. .++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ ..|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987643 46788999
Q ss_pred EeCCccccCC-cHHHhcCcC-CC-C-----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1272 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~-~~-~-----~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
+||+|.+|.+ |+++|+... .. . .++++.++++. +|++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQ---------VGIADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHH---------cCcHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999875 999998632 11 1 11233334444 455544555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
+|+|+||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999998864 37899999999999876 89999999999999874
No 316
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.3e-37 Score=367.79 Aligned_cols=215 Identities=23% Similarity=0.365 Sum_probs=182.3
Q ss_pred EEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC----hHhHhcceEE
Q 000553 1196 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1271 (1428)
Q Consensus 1196 nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~----~~~lR~~i~~ 1271 (1428)
|++++|+.. .+ |+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 34 999999999999999999999999999999999999999999999986532 3456889999
Q ss_pred EeCCccccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1349 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILl 1349 (1428)
+||++.+|++ |+++|+.+... ....+. .....+.++.+|++...+.....||||||||++|||||+++|++||
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1123345555577777777778999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHH
Q 000553 1350 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVF 1419 (1428)
Q Consensus 1350 LDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f 1419 (1428)
|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...|
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999987643 7899999999999876 89999999999999999999998776544
No 317
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3e-37 Score=353.47 Aligned_cols=224 Identities=25% Similarity=0.400 Sum_probs=185.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC---CceEEECCeeCCCC-----Ch
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1262 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~---~G~I~IDG~di~~i-----~~ 1262 (1428)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 46999999999999999999999999999999999999986 49999999998654 24
Q ss_pred HhHhcceEEEeCCccccCC-cHHHhcCcCCCC-----------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChh
Q 000553 1263 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVG 1330 (1428)
Q Consensus 1263 ~~lR~~i~~VpQdp~lf~g-TIR~NLdp~~~~-----------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgG 1330 (1428)
..+|++++|+||++.+|++ |+++|+...... .+++. .....+.++.+|++.........||+|
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQ-----KQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHH-----HHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 5678899999999998875 999999643110 01110 112334445556765566677789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1331 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1331 QrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~ 236 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998864 37899999999998765 89999999999999999
Q ss_pred hhHHhccCCcHHHHHHH
Q 000553 1408 PQTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1408 p~eLl~~~~s~f~~l~~ 1424 (1428)
++++ .+ ....+++.
T Consensus 237 ~~~~-~~--~~~~~~~~ 250 (262)
T PRK09984 237 SQQF-DN--ERFDHLYR 250 (262)
T ss_pred HHHh-cc--HHHHHHHh
Confidence 9997 32 24555553
No 318
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-38 Score=325.39 Aligned_cols=225 Identities=24% Similarity=0.388 Sum_probs=195.7
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcc
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGR 1268 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~ 1268 (1428)
+.+..+|+..+|.. .+|+++|||+|++||.||+.|||||||||.+.++.|+++|++|+|.+||.||+.+|.+.- |-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 46788999999964 479999999999999999999999999999999999999999999999999999998653 556
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
|+|+||||.+|.+ ||+|||...-+..+.+.+.+-++..+.+.++.+++...-...|..||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999987 999998644333222233344555566677777777777788889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hhhhcCEEEEEeCCeEEEecChhHHhccCC
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~-ti~~~DrI~Vl~~G~ive~g~p~eLl~~~~ 1416 (1428)
++||||.|++||-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|+|+.+|+.
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~~ 231 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNED 231 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcChh
Confidence 99999999999999999999998764 5778999999976 556699999999999999999999999864
No 319
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.4e-37 Score=346.88 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=176.2
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hHh
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1266 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1266 (1428)
++++|++++|+++. +.+|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 5699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEeCCccccC-CcHHHhcCcCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1267 GRFAVVPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~-gTIR~NLdp~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
+.++++||+|.+|. .|+.+|+.+... .+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 699999975321 22222211 123455556777667777789999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeE
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHL 1402 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~i 1402 (1428)
+++|++|||||||++||.++.+.+.+.|++.. .++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999998765 37999999999997777999999999986
No 320
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-38 Score=325.44 Aligned_cols=205 Identities=25% Similarity=0.341 Sum_probs=172.7
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC-----eEEEEcC-----
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG----- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~-----G~i~~~~----- 672 (1428)
...++++|.++.|.. ..+|+|||++|++++++|++|||||||||||+++....+... |+|.++|
T Consensus 5 ~~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~ 78 (253)
T COG1117 5 IPAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYD 78 (253)
T ss_pred cceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccC
Confidence 356889999998863 235999999999999999999999999999999998877665 8998876
Q ss_pred ----------cEEEEcCCCCCCcccHHHHHhcCCCC---C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
+||+|+|.|--|..||.|||.+|... . ++..++.++..+|-+..+ ....+.+..||
T Consensus 79 ~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LS 151 (253)
T COG1117 79 PKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLS 151 (253)
T ss_pred CCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCC
Confidence 59999999999999999999998532 1 244666677777765543 23456788999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 814 (1428)
|||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++.... +|+...+-+|+++|.
T Consensus 152 GGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~ 229 (253)
T COG1117 152 GGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF 229 (253)
T ss_pred hhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE
Confidence 9999999999999999999999999999999988887765 433 4556699999999998665 899999999999999
Q ss_pred cChHHHHh
Q 000553 815 GSSADLAV 822 (1428)
Q Consensus 815 g~~~el~~ 822 (1428)
|+.+++..
T Consensus 230 g~T~~iF~ 237 (253)
T COG1117 230 GPTDKIFT 237 (253)
T ss_pred cCHHhhhc
Confidence 99888753
No 321
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.2e-37 Score=346.57 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 36789999986321 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000553 673 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1428)
.++|++|++++++.|++||+.++.. ...++..+.++..++..-++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999988653 344455556666777777888998888888889999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhc
Q 000553 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 752 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|+++||||||++||+...+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988886 433 3357899999999999988999999999999999999887654
No 322
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2e-36 Score=389.73 Aligned_cols=226 Identities=24% Similarity=0.345 Sum_probs=156.7
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHh------cCC---CCCCce------------
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQ------------ 1249 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~------rl~---~~~~G~------------ 1249 (1428)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 588888852 2599999999999999999999999999998764 111 122222
Q ss_pred EEECCeeCCCCC----------hHhHhcceE---------EEeCCccccC-----------CcHHHhcCcCCC-------
Q 000553 1250 ILVDGLNIINTP----------VRDLRGRFA---------VVPQSPFLFE-----------GSLRDNLDPFHM------- 1292 (1428)
Q Consensus 1250 I~IDG~di~~i~----------~~~lR~~i~---------~VpQdp~lf~-----------gTIR~NLdp~~~------- 1292 (1428)
|.||..++..-+ .+.+|.-.+ +-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 444444433211 123333332 2222211111 355555433211
Q ss_pred -----------------CChH-----HHHHHHHHc----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1293 -----------------NDDL-----KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1293 -----------------~~d~-----ei~~aL~~~----~l---~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
.+-. .+.++++-. ++ .+.++.+||+. .++.....||||||||+.|||+|+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0111 122222221 11 22344448875 467778899999999999999999
Q ss_pred cCC---CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEE------eCCeEEEecChhHHh
Q 000553 1343 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1343 ~~~---~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl------~~G~ive~g~p~eLl 1412 (1428)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 588999999999999999999999 799999999999999
Q ss_pred ccCCcHHHHHH
Q 000553 1413 QDECSVFSSFV 1423 (1428)
Q Consensus 1413 ~~~~s~f~~l~ 1423 (1428)
+++.|.=.+.+
T Consensus 927 ~~~~s~t~~~l 937 (943)
T PRK00349 927 KVEASYTGRYL 937 (943)
T ss_pred hCcccHHHHHH
Confidence 88765444443
No 323
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=339.34 Aligned_cols=201 Identities=29% Similarity=0.394 Sum_probs=168.8
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
|.+++.+..|+.- .+++|||++|+.||++++.|||||||||||++|+|...|++|.|.++|
T Consensus 3 i~i~~~~~~~~~~------~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGAF------GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhcccc------cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 5666777667542 348999999999999999999999999999999999999999999886
Q ss_pred -cEEEEcCCCCCCc-ccHHHHHhcCCCC---------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 -SIAYVPQVPWILS-GTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~g~~~---------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
+||||.|+.-+|. .||.|||.||.+. ...+..+.++.|.|+.--+ .....||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHH
Confidence 4999999998875 5999999999632 2345667788888865333 3456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCcchh-hcCCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~e 819 (1428)
||||||+...|++|||||||+|||+++.+.+-+.+. .-..+ +.|+|+||||.++. ..||+|++|++|+|...|+++|
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr-~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLR-KLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHH-HHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 999999999999999999999999999887766632 21223 67999999999885 5699999999999999999999
Q ss_pred HHhcc
Q 000553 820 LAVSL 824 (1428)
Q Consensus 820 l~~~~ 824 (1428)
+....
T Consensus 225 v~~~P 229 (345)
T COG1118 225 VYDHP 229 (345)
T ss_pred HhcCC
Confidence 96543
No 324
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=357.83 Aligned_cols=204 Identities=27% Similarity=0.393 Sum_probs=175.3
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|++-+|.. ..+++|+||+|++||++++.|||||||||+|++|+|+..|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46899999998862 2459999999999999999999999999999999999999999999987
Q ss_pred cEEEEcCCCCCCcc-cHHHHHhcCCCC----C-h---HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 SIAYVPQVPWILSG-TIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~----~-~---~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.|++|+|+.-||.- ||+|||.||... . + +++.++++..+|+.-- ..+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHH
Confidence 59999999999865 999999999652 2 2 3677777777776533 3456699999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|||||..+|+++|||||+||||.+.++++-..+.......|.|.|+||||.+. +..+|+|++|++|+|.+.|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999999888776433323448899999999876 67799999999999999999999975
Q ss_pred cc
Q 000553 823 SL 824 (1428)
Q Consensus 823 ~~ 824 (1428)
..
T Consensus 227 ~P 228 (352)
T COG3842 227 RP 228 (352)
T ss_pred Cc
Confidence 43
No 325
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-37 Score=329.18 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=161.8
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+...+++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
+||+|.+|+.|++||+ ||+|||||++||||++++|++||||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCe
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1401 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1401 (1428)
|||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999998899999999985
No 326
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.3e-37 Score=342.52 Aligned_cols=204 Identities=31% Similarity=0.407 Sum_probs=174.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ++.+++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999875422 357999
Q ss_pred EeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|. .|+++|+.... ..+++++.++++.. |++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIV---------DLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHc---------CCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 59999986421 22334444444444 454444455568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhH
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQT 1410 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~e 1410 (1428)
|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999998764 47899999999999865 89999999999999999875
No 327
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=338.33 Aligned_cols=224 Identities=27% Similarity=0.456 Sum_probs=181.3
Q ss_pred EEEEEEEEEECCCC--CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-C----CCceEEECCeeCCCCChHh
Q 000553 1192 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1264 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~-~----~~G~I~IDG~di~~i~~~~ 1264 (1428)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++|+|+++ | .+|+|.+||.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 58899999997543 468999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred H---h-cceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHc-----------cHHHHHHhCCCch---hhhcCCCC
Q 000553 1265 L---R-GRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKC-----------HVKEEVEAVGLET---FVKESGIS 1326 (1428)
Q Consensus 1265 l---R-~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~-----------~l~~~i~~lgLdt---~v~e~G~~ 1326 (1428)
+ | +.|++|||||. .-|+|.-.. .+++.++++.- ...+.++..|++. .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~-------~sLnPv~~I-g~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPM-------TSLNPVMTI-GDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCch-------hhcCChhhH-HHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcc
Confidence 4 3 47999999995 122222111 11222222211 0112233335543 56777889
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEE
Q 000553 1327 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLV 1403 (1428)
Q Consensus 1327 LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~iv 1403 (1428)
||||||||+.||-||+.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999998765 48999999999999876 8999999999999
Q ss_pred EecChhHHhccCCcHHHHHH
Q 000553 1404 EQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1404 e~g~p~eLl~~~~s~f~~l~ 1423 (1428)
|.|+.+++++++.-.|.+.+
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999999876666543
No 328
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=341.92 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=187.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.. ..+++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 47899999998631 1359999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000553 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1428)
.++|++|+++++++|++||+.++.+ ...++..+.++.++++..++.+|.|.++..+....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3899999999999999999998754 34556677788889988899999999999999999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 751 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988876 433 345789999999999998899999999999999999887754
No 329
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-37 Score=327.77 Aligned_cols=170 Identities=32% Similarity=0.562 Sum_probs=157.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998766 677889999
Q ss_pred EeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000553 1272 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1350 (1428)
Q Consensus 1272 VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlL 1350 (1428)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999887 9999973 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1351 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1351 DEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+.. ||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998764 46899999999999885 799999999974
No 330
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.7e-36 Score=345.95 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=191.1
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
...++++|+++.|+... ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENNL----KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCCC----CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 46799999999996421 2359999999999999999999999999999999999999999999865
Q ss_pred ---cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000553 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1428)
.++||+|+|+++++|++||+........+.+..+++..++...++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999765444556677788888999899999999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 750 ~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
++|+++||||||++||+++.+.+++. +.. +.+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999998877765 433 345789999999999998999999999999999999988764
No 331
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1e-36 Score=334.44 Aligned_cols=185 Identities=23% Similarity=0.353 Sum_probs=163.9
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcC--CCCCCceEEECCeeCCCCChHhH-hcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl--~~~~~G~I~IDG~di~~i~~~~l-R~~ 1268 (1428)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876554 566
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999886 5666550 01136999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhh--hcCEEEEEeCCeEEEecChhHHh
Q 000553 1348 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~--~~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
++|||||++||..+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999998764 3789999999999998 58999999999999999 66664
No 332
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-37 Score=339.56 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=171.0
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----ChHhHhcc
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRGR 1268 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~~ 1268 (1428)
++ |++++|+.. .+ |+||+|++ |.+||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999753 34 99999999 99999999999999999999999999999999999998643 33457889
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
++++||++.+|++ |+++|+..... ..+++ ......+.++.+|++.........||+|||||++||||++++|+
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPE 151 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999865 99999974321 11111 11123445555677776777788999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 152 LLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999987643 7899999999999875 8999999999999875
No 333
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-37 Score=339.85 Aligned_cols=203 Identities=30% Similarity=0.409 Sum_probs=175.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|.+|.|+.+ ..+|+|+|+++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 47889999999754 2459999999999999999999999999999999999999999998765
Q ss_pred --cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
++|||.|+| .++..||.|.|.||.. .++ ++.+++++.|++....+.. ..+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceee
Confidence 499999999 7899999999999854 333 4567788888887664443 35899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
||||.+|..+|+++|||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999999886432212336899999999999876 999999999999999999887
Q ss_pred Hhc
Q 000553 821 AVS 823 (1428)
Q Consensus 821 ~~~ 823 (1428)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 653
No 334
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-37 Score=328.46 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.2
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCC--hHhHhcce
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1269 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR~~i 1269 (1428)
|+++|++++|+. +++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+|+||+|.+|.+ |+++|+... ||+|||||++|||||+++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998643 9999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCe
Q 000553 1349 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1401 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1401 (1428)
||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 335
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.7e-36 Score=338.64 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=185.1
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+... ..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 378999999996421 2359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000553 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1428)
.++|++|+|.+++.|++|||.+....+.++..+.++..++...+..+|.|.++..++.+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987766667777788888999988999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecC
Q 000553 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 752 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 816 (1428)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999988776 433 344689999999999999999999999999988765
No 336
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2e-36 Score=343.13 Aligned_cols=209 Identities=26% Similarity=0.408 Sum_probs=177.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 5899999999964 4699999999999999999999999999999999999999999999987 35799
Q ss_pred EEeCCccccC---CcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1271 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1271 ~VpQdp~lf~---gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
|+||+|.++. .|+++|+......+++++.++++.+++.+. +......||+|||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333345566666666655443 3444567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHHH
Q 000553 1348 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFVR 1424 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~~ 1424 (1428)
|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.++ ..|.+++.
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~~~ 218 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISMFG 218 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHHhC
Confidence 999999999999999999999987643 7899999999999865 899999965 79999999998753 35666653
No 337
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=334.15 Aligned_cols=190 Identities=24% Similarity=0.342 Sum_probs=162.1
Q ss_pred cEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCCceEEECCeeCCCCChHhH
Q 000553 1191 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~---~~~G~I~IDG~di~~i~~~~l 1265 (1428)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46899999999753 5679999999999999999999999999999999999999 89999999999998765 456
Q ss_pred hcceEEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccC
Q 000553 1266 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1344 (1428)
Q Consensus 1266 R~~i~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~ 1344 (1428)
|++++++||++.+|++ |+++|+...... . ..+....||+|||||++|||||+++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~----------------~~~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K----------------GNEFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c----------------cccchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 1223347999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEec-cChhhhh-hcCEEEEEeCCeEEEec
Q 000553 1345 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIA-HRISTVL-NMDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1345 ~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~Ia-Hrl~ti~-~~DrI~Vl~~G~ive~g 1406 (1428)
|++|||||||++||+++.+.+.+.|++..+ +.|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999988653 56766654 5566665 58999999999998865
No 338
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=340.76 Aligned_cols=212 Identities=32% Similarity=0.487 Sum_probs=187.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+... .++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (234)
T cd03251 1 VEFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRR 76 (234)
T ss_pred CEEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHh
Confidence 35788999886321 2359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000553 673 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1428)
.++|++|+|++++.|++||+.++.. +.++.+.+..+.+.+.+.++.+|.|.++..+..+.+||||||||++||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 77 QIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred hEEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 3899999999999999999998753 455667777788888888999998888889999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHhc
Q 000553 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 752 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 999999999999999999988776 433 3457899999999999988999999999999999998887644
No 339
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=347.66 Aligned_cols=209 Identities=25% Similarity=0.373 Sum_probs=172.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999633 469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEeCCccc---cCCcHHHhcCcCCC-------CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000553 1271 VVPQSPFL---FEGSLRDNLDPFHM-------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1271 ~VpQdp~l---f~gTIR~NLdp~~~-------~~----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1336 (1428)
|+||+|.+ +..++++|+..... .. ++.+.++++. +|++.........||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~gl~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALAR---------VDMVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHH---------cCChhHhcCCcccCCHHHHHHHH
Confidence 99999865 45689999753210 01 1123333333 35544445556689999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++.+
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~~ 230 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTFT 230 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhccC
Confidence 9999999999999999999999999999999998764 47899999999998865 7999777 899999999999864
No 340
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.1e-36 Score=340.45 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=184.8
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------c
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------~ 673 (1428)
+++|+++.|+.... .++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57889998864211 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000553 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1428)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1428)
++|++|+|++++.|++||+.++.. ...+.....++.+++...+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998753 3445556677778888888899998888888999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 753 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+++||||||++||+...+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988876 433 236789999999999998999999999999999998877653
No 341
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.3e-36 Score=328.63 Aligned_cols=172 Identities=30% Similarity=0.502 Sum_probs=156.5
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1269 (1428)
.++++|++++| +|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988763 4568899
Q ss_pred EEEeCCc---ccc-CCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSP---FLF-EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp---~lf-~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+|+||+| .++ ..|++||+..... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 344 5699999864210 9999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeE
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1402 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~i 1402 (1428)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999987 899999999975
No 342
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-36 Score=339.55 Aligned_cols=210 Identities=30% Similarity=0.485 Sum_probs=185.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+.. ..+++|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ 75 (236)
T cd03253 1 IEFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRR 75 (236)
T ss_pred CEEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHh
Confidence 3578899988532 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000553 673 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~ 751 (1428)
.++|++|+|++++.|++||+.++.. ...+.....++.+++...+..+|.|.++.++.++.+||||||||++||||++.+
T Consensus 76 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~ 155 (236)
T cd03253 76 AIGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKN 155 (236)
T ss_pred hEEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 3899999999999999999998753 344455667788889888899999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 752 ~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 156 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 156 PPILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999988876 333 233789999999999998899999999999999998887754
No 343
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-36 Score=331.21 Aligned_cols=182 Identities=29% Similarity=0.450 Sum_probs=161.4
Q ss_pred cEEEEEEEEEECCC----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCceEEECCeeCCCCChHh
Q 000553 1191 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~--~~~~G~I~IDG~di~~i~~~~ 1264 (1428)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 256999999999999999999999999999999999999 9999999999999874 36
Q ss_pred HhcceEEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1265 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1265 lR~~i~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
.|++++++||++.+|++ |+++|+.... . +. .||+|||||++|||||++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~-----------~~--------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------K-----------LR--------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------H-----------hc--------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 0 00 699999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hhhh-cCEEEEEeCCeEEEec
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~-ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+|+++||||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+.. ||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998864 4899999999997 4554 8999999999998764
No 344
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=323.09 Aligned_cols=207 Identities=28% Similarity=0.371 Sum_probs=172.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|.++.|..... ...+++||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~~--~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGKF--AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCcc--hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 4788999999976421 22579999999999999999999999999999999999999999999987
Q ss_pred --cEEEEcCCCCC-Cc--ccHHHHHhcCC-----CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 --SIAYVPQVPWI-LS--GTIRDNILFGK-----NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 --~i~y~~Q~p~l-~~--~ti~~nI~~g~-----~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.|-+|+|+|.- +| -||++-|.-+- +-.+++..++++..+|.... .......|||||+|||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHH
Confidence 38999999962 33 48888875332 22345577788888886643 2344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|+++|.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986433223456699999999999987 9999999999999999998886
Q ss_pred hc
Q 000553 822 VS 823 (1428)
Q Consensus 822 ~~ 823 (1428)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 54
No 345
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=321.48 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=170.9
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|++-.|+.. ..+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 358899999999743 3459999999999999999999999999999999999999999999876
Q ss_pred -----cEEEEcCCCCCCcc-cHHHHHhcCCC------------CChHHHHHHHH---HhcchHHHhcccCCCcccccCCC
Q 000553 673 -----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETLK---ACTLDVDISLMVGGDMAYIGEKG 731 (1428)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~~------------~~~~~~~~v~~---~c~l~~di~~l~~gd~t~ig~~g 731 (1428)
+|||++|++-|.+. ||.+|++.|.- +.++....+++ ..++.+. .-.+.
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra 145 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRA 145 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHh
Confidence 59999999998765 99999998742 34444444443 3333322 23456
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCe
Q 000553 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQ 810 (1428)
Q Consensus 732 ~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~ 810 (1428)
.+|||||+|||+|||||+++|+|+|-|||+|+|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 6999999999999999999999999999999999999999999744333556889999999999965 699999999999
Q ss_pred EEEecChHHHHh
Q 000553 811 VKWIGSSADLAV 822 (1428)
Q Consensus 811 i~~~g~~~el~~ 822 (1428)
|++.|+.+|+..
T Consensus 226 ivfDg~~~el~~ 237 (258)
T COG3638 226 IVFDGPASELTD 237 (258)
T ss_pred EEEeCChhhhhH
Confidence 999999988643
No 346
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4e-36 Score=342.59 Aligned_cols=217 Identities=22% Similarity=0.335 Sum_probs=177.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcC--CCCCCceEEECCeeCCCCChHhHhc-
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl--~~~~~G~I~IDG~di~~i~~~~lR~- 1267 (1428)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 5999999999964 3699999999999999999999999999999999998 6899999999999998887766554
Q ss_pred ceEEEeCCccccCC-cHHHhcCcCCC----C---ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000553 1268 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1337 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~g-TIR~NLdp~~~----~---~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~-~LSgGQrQrl~L 1337 (1428)
.++++||+|.+|++ |+++|+..... . .+.+..+..+ ...+.++.+|+. ...+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLE--IINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHH--HHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 58999999999987 78999753210 0 0100011111 123334444665 34455444 599999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh--cCEEEEEeCCeEEEecChhHH
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
||||+++|+||||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|+++
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 999999999999999999999999999999998764 48999999999999875 799999999999999999844
No 347
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.8e-36 Score=326.92 Aligned_cols=177 Identities=33% Similarity=0.525 Sum_probs=158.5
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEE
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1272 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1272 (1428)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4699999999999999999999999999999999999999999999999999988888888899999
Q ss_pred eCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000553 1273 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1352 (1428)
Q Consensus 1273 pQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDE 1352 (1428)
|| +++.+++. ..+...+..||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~---------~~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLA---------HLADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCH---------hHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 44444443 33445566899999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1353 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1353 aTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 7899999999999855 8999999999998754
No 348
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=330.60 Aligned_cols=181 Identities=24% Similarity=0.382 Sum_probs=160.1
Q ss_pred cEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCceEEECCeeCCCCChHhHh
Q 000553 1191 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1266 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR 1266 (1428)
.|+++|++++|++. .+++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999742 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cceEEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1267 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1267 ~~i~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++++++||+|.+|++ |+++|+.... .++ +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~----------------------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR----------------------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh----------------------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 9999986310 000 69999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-h-hhcCEEEEEeC-CeEEEec
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDH-GHLVEQG 1406 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~-G~ive~g 1406 (1428)
++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 47999999999984 4 56899999999 9999875
No 349
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.4e-36 Score=333.83 Aligned_cols=197 Identities=27% Similarity=0.376 Sum_probs=163.7
Q ss_pred EEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh----HhHhcce
Q 000553 1194 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1269 (1428)
Q Consensus 1194 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~i 1269 (1428)
++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 469999999999999999999999999999999999999999999999999765542 3467889
Q ss_pred EEEeCCccccC-CcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++++|+|.+|+ .|+++|+.+... ...++..+ ...+.++.+|++...+....+||+|||||++|||||+++|
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p 153 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKRE-----KKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDP 153 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 99999999997 599999975211 11111111 1223444446655556666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEE
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1397 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl 1397 (1428)
++|||||||++||+++.+.+.+.|++.. ++.|+|++||+++.+..||+|++|
T Consensus 154 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 154 PLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred CEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999998764 479999999999988889999875
No 350
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.3e-36 Score=341.59 Aligned_cols=210 Identities=24% Similarity=0.383 Sum_probs=177.3
Q ss_pred EEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEE
Q 000553 1193 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1272 (1428)
Q Consensus 1193 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1272 (1428)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788775 289999999999999999999999999999999999864 99999999999988888888899999
Q ss_pred eCCccc-cCCcHHHhcCcCCCC--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc------
Q 000553 1273 PQSPFL-FEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1343 (1428)
Q Consensus 1273 pQdp~l-f~gTIR~NLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~------ 1343 (1428)
||+|.+ +..|+++|+..+... +..+. .....+.++.+|++.........||+|||||++|||||++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 999854 567999999764321 11111 1123345555577666666777899999999999999997
Q ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1344 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1344 -~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 223 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLTP 223 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhCc
Confidence 679999999999999999999999998764 47899999999998765 899999999999999999998753
No 351
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3e-36 Score=320.41 Aligned_cols=164 Identities=33% Similarity=0.449 Sum_probs=150.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
+||+|.++++|+++|+... ....||+|||||++||||++++|+++|||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999999642 13479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCEEEEEeCCe
Q 000553 1352 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1401 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1401 (1428)
|||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999999999999999999876 689999999999888899999998763
No 352
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-36 Score=358.69 Aligned_cols=188 Identities=27% Similarity=0.367 Sum_probs=159.2
Q ss_pred cceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------------cEEEEcCCCCCCcc-
Q 000553 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 686 (1428)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~~- 686 (1428)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++++.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999865 49999999999975
Q ss_pred cHHHHHhcCCCC---Ch-HHHH---HHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000553 687 TIRDNILFGKNY---DP-QSYS---ETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1428)
Q Consensus 687 ti~~nI~~g~~~---~~-~~~~---~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDe 759 (1428)
||+|||.|+.++ +. ++++ ++++..+|+.. .+....+|||||||||+|||||+.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999987432 22 2333 44444444332 455666999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhc
Q 000553 760 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 760 p~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|||+||+.+.+.+.+.+.......++|+|+|||+++.+. .||+|++|++|++++.|+++++..+
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988754321234789999999999864 5999999999999999999998754
No 353
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.2e-36 Score=357.12 Aligned_cols=227 Identities=27% Similarity=0.453 Sum_probs=183.9
Q ss_pred cEEEEEEEEEECCCCC--ccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC----CceEEECCeeCCCCChHh
Q 000553 1191 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1264 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~--~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~----~G~I~IDG~di~~i~~~~ 1264 (1428)
.++++|++..|..... .+++||||+|.+||.+||||.|||||||+.++|+|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 5999999999999999999999999999999999999987 899999999999888766
Q ss_pred Hh----cceEEEeCCcc-ccCC--cHHHhcC----cCCCCChHHHHHHHHHccHHHHHHhCCCchhhh--cCCCCCChhH
Q 000553 1265 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK--ESGISFSVGQ 1331 (1428)
Q Consensus 1265 lR----~~i~~VpQdp~-lf~g--TIR~NLd----p~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~--e~G~~LSgGQ 1331 (1428)
.| ++|++|||||. .++- ||.+-+. .....+.+| + +....+.++..|+..... .-...|||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~e---a--~~~a~elL~~Vgl~~~~~~~~yPheLSGG~ 159 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAE---A--RKRAVELLEQVGLPDPERRDRYPHQLSGGM 159 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHH---H--HHHHHHHHHHcCCCChhhhccCCcccCchH
Confidence 54 57999999996 3432 4444432 111111111 0 011122333336654444 3677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
|||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.. ||||+||.+|++||.|++
T Consensus 160 rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 160 RQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 999999999999999999999999999999999999998875 58999999999999987 899999999999999999
Q ss_pred hHHhccCCcHHHHH
Q 000553 1409 QTLLQDECSVFSSF 1422 (1428)
Q Consensus 1409 ~eLl~~~~s~f~~l 1422 (1428)
+++++++.-.|.+.
T Consensus 240 ~~i~~~p~hpYT~~ 253 (539)
T COG1123 240 EEILSNPQHPYTRG 253 (539)
T ss_pred HHHHhccCCcccHH
Confidence 99999886555543
No 354
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.5e-36 Score=337.88 Aligned_cols=206 Identities=25% Similarity=0.373 Sum_probs=168.6
Q ss_pred cceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC----CCceEEECCeeCCCCChHhHhcceEEEeCCcc-cc-C-
Q 000553 1208 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1280 (1428)
Q Consensus 1208 vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lf-~- 1280 (1428)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred CcHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 000553 1281 GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1353 (1428)
Q Consensus 1281 gTIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEa 1353 (1428)
-|+.+|+... +... .+. .....+.++.+|++ ........+||+|||||++||||++++|+|||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLS-KQA-----RALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred cCHHHHHHHHHHHcCccH-HHH-----HHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4888887321 1111 110 01123334444565 456667778999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHH
Q 000553 1354 TANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSS 1421 (1428)
Q Consensus 1354 TS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~ 1421 (1428)
|++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 999999999999999987653 7899999999999975 8999999999999999999998766555554
No 355
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=355.78 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=170.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------c
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~ 673 (1428)
.++++|+++.|+.+ ..+|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37899999999421 2359999999999999999999999999999999999999999999886 4
Q ss_pred EEEEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
||||+|++.+|. .||+|||.|+.. .+. ++.+++++..+|+.... ....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHH
Confidence 999999999985 599999998743 222 34556677777765443 34458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhc
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|||+.+|+++|||||||+||+.+.+.+.+.+ .... ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 3212 23789999999998765 5999999999999999999998643
No 356
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8.4e-36 Score=332.88 Aligned_cols=205 Identities=34% Similarity=0.463 Sum_probs=180.7
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|.++.|.... ..+++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQE----IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCCC----cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 378899999985321 2359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000553 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1428)
.++|++|+|++++.|++||+.++.. .++++..+.++.+++...++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 4899999999988899999988643 34556778888899988889999999999998999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEec
Q 000553 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 751 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 815 (1428)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988886 433 33348999999999988889999999999997653
No 357
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=6.1e-36 Score=340.31 Aligned_cols=215 Identities=18% Similarity=0.289 Sum_probs=171.0
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCceEEECCeeCCCCChHhHh-cc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR-~~ 1268 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999974 36999999999999999999999999999999999995 69999999999999887766554 57
Q ss_pred eEEEeCCccccCC-cHHHhcCcC-C---CCChHHHHHHHHHcc----HHHHHHhCCCch-hhhcCCC-CCChhHHHHHHH
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCH----VKEEVEAVGLET-FVKESGI-SFSVGQRQLICL 1337 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~-~---~~~d~ei~~aL~~~~----l~~~i~~lgLdt-~v~e~G~-~LSgGQrQrl~L 1337 (1428)
++++||+|.+++. |..+|+... . .....+ .++..+ +.+.++.++++. ....... .||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443210 0 000000 111111 223334446632 2222232 699999999999
Q ss_pred HHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhhhh--cCEEEEEeCCeEEEecChhHH
Q 000553 1338 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1338 ARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~-~~TvI~IaHrl~ti~~--~DrI~Vl~~G~ive~g~p~eL 1411 (1428)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|++++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999987643 7899999999999987 799999999999999999854
No 358
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=335.10 Aligned_cols=176 Identities=22% Similarity=0.303 Sum_probs=133.7
Q ss_pred EEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCc-cccCCcHHHhcCcCCC-
Q 000553 1215 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP-FLFEGSLRDNLDPFHM- 1292 (1428)
Q Consensus 1215 ~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp-~lf~gTIR~NLdp~~~- 1292 (1428)
+|..||.+|++||||-||||++++|.|.++|++|+ ..++ +++|=||-- .-|+|||++-|.--..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45567899999999999999999999999999998 2222 588889853 2388999987632111
Q ss_pred -CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHH
Q 000553 1293 -NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1371 (1428)
Q Consensus 1293 -~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~ 1371 (1428)
+.+.-.+ .+.+..+.|+..+...-.+|||||.||++||-||.|++++.+||||+|.||.+..-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 1111111 1233444666666666678999999999999999999999999999999999999999999987
Q ss_pred hc--CCcEEEEeccChhhhhh-cCEEEEEeC--CeEEEecChhHHh
Q 000553 1372 EC--KGMTVITIAHRISTVLN-MDEILILDH--GHLVEQGNPQTLL 1412 (1428)
Q Consensus 1372 ~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~--G~ive~g~p~eLl 1412 (1428)
.. .++|.++|-|++-.+.- +||++|.+. |+=-....|..+.
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 54 58899999999998875 699999963 3222233455553
No 359
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=350.27 Aligned_cols=210 Identities=27% Similarity=0.426 Sum_probs=171.9
Q ss_pred CCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC---------
Q 000553 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1428)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------- 672 (1428)
.+..++++|++|.|+...+ ...++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 4457999999999974211 113469999999999999999999999999999999999999999998763
Q ss_pred --------------------cEEEEcCCC--CCCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCC
Q 000553 673 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 723 (1428)
Q Consensus 673 --------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd 723 (1428)
.|+||+|+| ++++.||+|||.|+.. .+++ +..+.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7899999999998742 2222 2333444444432
Q ss_pred cccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCE
Q 000553 724 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 802 (1428)
Q Consensus 724 ~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~ 802 (1428)
...++.+.+||||||||++|||||..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 224667789999999999999999999999999999999999999988876 3331235789999999999875 6999
Q ss_pred EEEEeCCeEEEecChHHHHhc
Q 000553 803 VVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 803 i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|++|++|++++.|+++++...
T Consensus 246 i~vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999988643
No 360
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.9e-36 Score=352.60 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
|+++|+++.|+.... ...+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 688999999964211 12469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
+|+|++|++.++. .||+|||.++.. .+. ++..++++..+|.+.. ......||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 4899999999885 699999987632 222 2334555555554322 34456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~e 819 (1428)
|+|||||..+|+++|||||||+||+.+.+.+++. +.... ..+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999998876 33211 237899999999999865 99999999999999999999
Q ss_pred HHh
Q 000553 820 LAV 822 (1428)
Q Consensus 820 l~~ 822 (1428)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 361
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=322.51 Aligned_cols=222 Identities=26% Similarity=0.432 Sum_probs=190.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1269 (1428)
-++.+|++.+|+. -.+++||||++++||.+||+|||||||||++++|.|+|+|++|+|.++|.||..++.+.. |..|
T Consensus 4 lL~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 4 LLEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 3678999999964 359999999999999999999999999999999999999999999999999999998774 4568
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCC------------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1336 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~------------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1336 (1428)
+--.|.+-+|++ ||-||+.-.... ...+-.++.++ ..+.++.+||+...++...+||+||++||-
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~vgL~~~a~~~A~~LsyG~qR~LE 159 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEFVGLGELADRPAGNLSYGQQRRLE 159 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHHcCCchhhcchhhcCChhHhHHHH
Confidence 888999999987 999998543110 00011122222 234455568988888888899999999999
Q ss_pred HHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1337 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1337 LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-||++.+++ ||||+||+.|+++.+|+|+|..+
T Consensus 160 IArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 160 IARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRN 239 (250)
T ss_pred HHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhc
Confidence 99999999999999999999999988889999988764 5899999999999998 89999999999999999999998
Q ss_pred cCC
Q 000553 1414 DEC 1416 (1428)
Q Consensus 1414 ~~~ 1416 (1428)
|+.
T Consensus 240 dp~ 242 (250)
T COG0411 240 NPR 242 (250)
T ss_pred CHH
Confidence 763
No 362
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.3e-36 Score=337.85 Aligned_cols=194 Identities=27% Similarity=0.364 Sum_probs=163.4
Q ss_pred ceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccccC-CcHHHhc
Q 000553 1209 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1287 (1428)
Q Consensus 1209 L~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIR~NL 1287 (1428)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|+ .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CcC-----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHH
Q 000553 1288 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1362 (1428)
Q Consensus 1288 dp~-----~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te 1362 (1428)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1122222111 123344455666656666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1363 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1363 ~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999998764 37899999999999876 8999999999999999887763
No 363
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.1e-36 Score=337.66 Aligned_cols=195 Identities=29% Similarity=0.381 Sum_probs=160.8
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEe-CCccccC-CcH
Q 000553 1206 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLFE-GSL 1283 (1428)
Q Consensus 1206 ~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp-Qdp~lf~-gTI 1283 (1428)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+|. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 6677764 599
Q ss_pred HHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHH
Q 000553 1284 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1360 (1428)
Q Consensus 1284 R~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~ 1360 (1428)
++|+.... ..++++..+. ..+.++.+|++.........||+|||||++|||||+.+|++|||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99985421 1222222221 122333446655455555679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1361 TASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1361 te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999998764 37899999999999876 8999999999998765
No 364
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=6e-35 Score=388.68 Aligned_cols=211 Identities=24% Similarity=0.288 Sum_probs=154.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHH---------HHhcCCCCCC----c----eEEEC
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1253 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~---------~L~rl~~~~~----G----~I~ID 1253 (1428)
.++++|++. ..|+|+|++|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888762 2799999999999999999999999999999 4455432211 1 24666
Q ss_pred CeeCCCCCh----H------hHhc---------c-----eEEEeCC------------------c---------------
Q 000553 1254 GLNIINTPV----R------DLRG---------R-----FAVVPQS------------------P--------------- 1276 (1428)
Q Consensus 1254 G~di~~i~~----~------~lR~---------~-----i~~VpQd------------------p--------------- 1276 (1428)
..++..-+. . ++|+ + ..+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 666543222 1 4441 1 1112221 1
Q ss_pred -----cccCC-cHHHhcCcCCC-----C-ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHHc-
Q 000553 1277 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1342 (1428)
Q Consensus 1277 -----~lf~g-TIR~NLdp~~~-----~-~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARALL- 1342 (1428)
+.+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+....+||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13334 78888765421 0 112222222 23444588765 78888899999999999999998
Q ss_pred --cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEEe------CCeEEEecChhHHhc
Q 000553 1343 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1343 --~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~------~G~ive~g~p~eLl~ 1413 (1428)
++|+++||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|+++..
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 5999999999999999999999999998764 5889999999999998799999996 799999999999986
Q ss_pred c
Q 000553 1414 D 1414 (1428)
Q Consensus 1414 ~ 1414 (1428)
.
T Consensus 907 ~ 907 (1809)
T PRK00635 907 L 907 (1809)
T ss_pred c
Confidence 3
No 365
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-36 Score=300.27 Aligned_cols=197 Identities=25% Similarity=0.408 Sum_probs=171.3
Q ss_pred EECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCcccc
Q 000553 1200 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1279 (1428)
Q Consensus 1200 ~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf 1279 (1428)
+|.....++|+|+||++++||.++|.||||||||||++.+.-+..|++|.++..|.|+++.+++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46666678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHhcC-cC---CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccc
Q 000553 1280 EGSLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1354 (1428)
Q Consensus 1280 ~gTIR~NLd-p~---~~~~d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaT 1354 (1428)
.+||.+||- |+ +...|... ..++++..+++ +.+..+..+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~a--------a~~llar~~l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAA--------ALDLLARFALPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChHH--------HHHHHHHcCCchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999985 33 22233221 12233334443 4556667789999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhh-hhhcCEEEEEeCCeEEE
Q 000553 1355 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLVE 1404 (1428)
Q Consensus 1355 S~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~t-i~~~DrI~Vl~~G~ive 1404 (1428)
|+||..+.+.|.+.|.+++ ++..++.|||+-+. ++.+||++-+..|++-|
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999998887 48899999999998 78899999999998754
No 366
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.6e-32 Score=331.15 Aligned_cols=452 Identities=16% Similarity=0.170 Sum_probs=314.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--hH---HHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000553 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--GE---IQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY 411 (1428)
Q Consensus 338 ~~~~~~~~~~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~--g~---i~nlms~D~~~i~~~~~-~~~~~w~~p~~i~i~~~ 411 (1428)
...|...++..+.|..|+..+.+|-|.-....+-.... +. .-..+..|+..+.+... ....+..+.+.++.-..
T Consensus 105 ~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 105 AQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 35566778999999999999999999877543321111 11 22477788877766433 33444455555555555
Q ss_pred HHHHHhHHHH---------HHH--HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcH
Q 000553 412 LLYTQVKFAF---------VSG--LAITILLIPVNKWIANLIAN----ATEKMMKQKDERIRRTGEILTHIRTLKMYGWE 476 (1428)
Q Consensus 412 lL~~~lg~a~---------l~g--~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e 476 (1428)
+||...|.-+ +.| +.++++.++...+++-++++ ...+..+.-..--.....+..+...|-+|+-|
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 6664444211 111 11223334444444444443 32222222222234455788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCCCCcHhHHHHHHHHHHHHHHHHHHHHH
Q 000553 477 QIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTF--GLFALMGHQLDAAMVFTCLALFNSLISPLNSFPW 554 (1428)
Q Consensus 477 ~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f--~~y~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~ 554 (1428)
+...+++++.-..=++..++..........+......+..++-+ ++=.+..+.++-+.+.++-..|+.+...++-+..
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~ 344 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFID 344 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887776654433333332222211111111111111111111 1112457789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCC---CchhhhhhcCCCCcccCCCcc-CCCCCceEEEEccEEeecCCCccccccceeee
Q 000553 555 VINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLSN-FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQV 630 (1428)
Q Consensus 555 ~i~~~~~a~~s~~RI~~fL~~~e---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i 630 (1428)
.++.+.+=+++..|+.+|-..-+ .++.. +... ..... .+..+..|.++|++..-+.. ...+++.
T Consensus 345 ~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~------~~~~-~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~~l 412 (604)
T COG4178 345 NYDAIADWRATLLRLAEFRQALEAAQMDTEK------PART-GRRIDFDDNADHGITLENLSLRTPDG-----QTLLSEL 412 (604)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhccCcccc------cCcc-cccccccccccceeEEeeeeEECCCC-----Ceeeccc
Confidence 99999999999999999985322 11100 0000 00000 01115789999999986643 2459999
Q ss_pred eeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEc-C-cEEEEcCCCCCCcccHHHHHhcCCC---CChHHHHH
Q 000553 631 SLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGKN---YDPQSYSE 705 (1428)
Q Consensus 631 ~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~-~-~i~y~~Q~p~l~~~ti~~nI~~g~~---~~~~~~~~ 705 (1428)
|+++++|+-+.|.|+||||||||+++|.|..|--+|.|... + .+-|+||.|.++.||.||-|++... ++++.+.+
T Consensus 413 ~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~ 492 (604)
T COG4178 413 NFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVA 492 (604)
T ss_pred eeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHH
Confidence 99999999999999999999999999999999999999887 3 4899999999999999999999742 78899999
Q ss_pred HHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCc
Q 000553 706 TLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQK 785 (1428)
Q Consensus 706 v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~ 785 (1428)
++..|+|.+-++.+.+-+. =...||||||||+|+||.++++|++++|||.|||||++++..+++. +.. .+.+.
T Consensus 493 vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp~~ 565 (604)
T COG4178 493 VLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELPDA 565 (604)
T ss_pred HHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCCCC
Confidence 9999999988877654332 3457999999999999999999999999999999999999999887 444 56789
Q ss_pred eEEEEccCcchhhcCCEEEEEeC
Q 000553 786 TRILCTHNVQAISAADMVVVMDK 808 (1428)
Q Consensus 786 t~ilvth~~~~l~~ad~i~~l~~ 808 (1428)
|+|-|.|+.......++.+.+.+
T Consensus 566 tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 566 TVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred EEEEeccchhhHHHHhhheeecc
Confidence 99999999998888777666643
No 367
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=310.33 Aligned_cols=506 Identities=16% Similarity=0.137 Sum_probs=332.0
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH-HHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000553 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGY-VLAIALGLTSI-LKSFFDTQYSFHLSKL 346 (1428)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~-~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 346 (1428)
+.-.++|.++|+++....+.++..+... .++-.+-+++-+......++ .+.+++.+..+ .+.+.. ....-+
T Consensus 3 ~ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~----lg~t~~ 75 (546)
T COG4615 3 LLLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQ----LGLTTL 75 (546)
T ss_pred hHHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 3457888999998887766665544333 22222223332211111111 12222222222 222222 222233
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000553 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1428)
Q Consensus 347 ~~~ir~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~w~~p~~i~i~~~lL~~~lg~a~l~g~~ 426 (1428)
|..+-..+...+-+|.+.-+.....+..++.++.-++.|+..|...+..+.++-.+.+-+..++..|++.-+..++..++
T Consensus 76 gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV 155 (546)
T COG4615 76 GQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVV 155 (546)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34444444555667778888777777778899999999999999877777776655555555555666666666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000553 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1428)
Q Consensus 427 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1428)
.+++.+..+++...+..+...+..+.-|+-.+..+.++.|-|.+|...=- ..+.+.+.. -.+|.+. +..+...+.
T Consensus 156 ~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~-~a~~~r~--~~~~~n~f~ 232 (546)
T COG4615 156 WIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIP-DAQEYRH--HIIRANTFH 232 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCc-chHHHHh--hhhhhhHHH
Confidence 77777788888888888888888899999999999999999999987622 111111110 0111111 111112221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCC-cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCchh-
Q 000553 505 -VFFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE- 581 (1428)
Q Consensus 505 -~~~~~~~~~~~~~~~f~~y~~~~~~L-t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~- 581 (1428)
.........+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+-
T Consensus 233 ~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~ 312 (546)
T COG4615 233 LLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFP 312 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCC
Confidence 11112222333444444444322212 222444544556678899999999999999999999999998654433221
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc
Q 000553 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1428)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~ 661 (1428)
..+ + .++-..++++|+.|+|.+. .+-+.-||++|++||++.|+|.||||||||++.+.|.+
T Consensus 313 ~~q----~----------~p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~ 373 (546)
T COG4615 313 RPQ----A----------FPDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLY 373 (546)
T ss_pred CCC----c----------CCcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhccc
Confidence 111 0 1123568999999999754 24488999999999999999999999999999999999
Q ss_pred cCCCeEEEEcCc-------------EEEEcCCCCCCcccHHHHHhcCCC-CChHHHHHHHHHhcchHHHhcccCCCcccc
Q 000553 662 MLTHGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 727 (1428)
Q Consensus 662 ~~~~G~i~~~~~-------------i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~c~l~~di~~l~~gd~t~i 727 (1428)
.|++|+|.++|. ++-++-|-|+|+.+ +.++. -.++..++-++.-.+.... ++.+|.-+
T Consensus 374 ~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs-- 445 (546)
T COG4615 374 QPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS-- 445 (546)
T ss_pred CCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhh-cccCCccc--
Confidence 999999999984 23333444544332 22222 3455555555555554432 23333322
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEe
Q 000553 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 807 (1428)
Q Consensus 728 g~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 807 (1428)
...||-|||.|+|+--|+.-+.|||+|||=-+-=||+-+++.++..+-.....|||++.||||-.+...|||++.|+
T Consensus 446 ---~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~ 522 (546)
T COG4615 446 ---NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMR 522 (546)
T ss_pred ---ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHh
Confidence 24799999999999999999999999999999999999888877644222456999999999999999999999999
Q ss_pred CCeEEEe
Q 000553 808 KGQVKWI 814 (1428)
Q Consensus 808 ~G~i~~~ 814 (1428)
+|++++.
T Consensus 523 ~G~~~e~ 529 (546)
T COG4615 523 NGQLSEL 529 (546)
T ss_pred cCceeec
Confidence 9999864
No 368
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-35 Score=330.62 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.8
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------- 672 (1428)
.+.|+.|.|+.+ ..+++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 467888998743 2359999999999999999999999999999999999999999998853
Q ss_pred ---cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000553 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1428)
.++|++|+|.+++.|++||+.++.+++.++.+++++++++...++.+|.|++|..+....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999989999999987766667778899999999888889999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHH-hhcCcccCCceEEEEccCcchhhcCCEEEEEeCCe
Q 000553 750 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1428)
Q Consensus 750 ~~~~illLDep~s~LD~~~~~~i~~~-~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 810 (1428)
.+|+++||||||++||+.+.+.+.+. ++.....+++|+|++||+.+.+..||++++|++|+
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887762 23221234689999999999998999999999884
No 369
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=350.38 Aligned_cols=201 Identities=28% Similarity=0.413 Sum_probs=168.4
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 78 (351)
T PRK11432 5 NFVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQR 78 (351)
T ss_pred cEEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHC
Confidence 36889999999963 2359999999999999999999999999999999999999999999876
Q ss_pred cEEEEcCCCCCCcc-cHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHH
Q 000553 673 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 744 (1428)
+|+||+|++.+|.. ||+|||.|+.. .++ ++.+++++..++... ......+|||||||||+|
T Consensus 79 ~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaL 147 (351)
T PRK11432 79 DICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVAL 147 (351)
T ss_pred CEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 59999999999865 99999999743 222 234445555555432 234456899999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHh
Q 000553 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 745 ARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||||+.+|+++|||||||+||+.+.+.+.+. +.... ..++|+|+|||+.+.+. .||+|++|++|+|.+.|+++++..
T Consensus 148 ARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~ 226 (351)
T PRK11432 148 ARALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYR 226 (351)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999988776 33312 23789999999999865 599999999999999999998864
No 370
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.5e-35 Score=368.20 Aligned_cols=215 Identities=24% Similarity=0.393 Sum_probs=183.8
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHh-cce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR-~~i 1269 (1428)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999887766654 569
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+|+||++.+|++ |+++|+.......+ +..+ .+.+.++.+|++.........||||||||++|||||+++|+||
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASMQ-----KMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHHH-----HHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 99999975432111 1111 1233444556665555666689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1349 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++++..
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999998763 47899999999999876 89999999999999999998865
No 371
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=370.96 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=183.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCceEEECCeeCCCCChHh-Hhc
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1267 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~ 1267 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5899999999963 4699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ceEEEeCCccccCC-cHHHhcCcCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1268 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1268 ~i~~VpQdp~lf~g-TIR~NLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
+++||||+|.+|+. |+++|+.+... .+.++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999988875 99999975421 11111111 13344555577655556667899999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|+.+|+||||||||++||+++...+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH
Confidence 999999999999999999999999999998763 47899999999999876 89999999999999999988743
No 372
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-35 Score=323.01 Aligned_cols=218 Identities=27% Similarity=0.375 Sum_probs=185.5
Q ss_pred cEEEEEEEEEECCCC----------------------CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCc
Q 000553 1191 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1248 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~----------------------~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G 1248 (1428)
.|+++||+.-++.+. ..-++|+||+|+.||..-|.|-||||||||++++-|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588899988886431 1237899999999999999999999999999999999999999
Q ss_pred eEEECCeeCCCCChHhHh----cceEEEeCCccccCC-cHHHhcCcCCCC---ChH----HHHHHHHHccHHHHHHhCCC
Q 000553 1249 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---DDL----KIWSVLEKCHVKEEVEAVGL 1316 (1428)
Q Consensus 1249 ~I~IDG~di~~i~~~~lR----~~i~~VpQdp~lf~g-TIR~NLdp~~~~---~d~----ei~~aL~~~~l~~~i~~lgL 1316 (1428)
+|++||.||..++..+|| +++++|.|.--||+- ||-+|..++-+. +.+ ...++|+.+||
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL--------- 154 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGL--------- 154 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCc---------
Confidence 999999999999987775 679999999999986 999999876432 222 23344555544
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCE
Q 000553 1317 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDE 1393 (1428)
Q Consensus 1317 dt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~Dr 1393 (1428)
+..-......||||+|||+.|||||..+|+||+||||.|+|||--...+|+-+.+.- -++|+++|||+|+.... -||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 444445566899999999999999999999999999999999999999998876543 38999999999998766 699
Q ss_pred EEEEeCCeEEEecChhHHhccCCc
Q 000553 1394 ILILDHGHLVEQGNPQTLLQDECS 1417 (1428)
Q Consensus 1394 I~Vl~~G~ive~g~p~eLl~~~~s 1417 (1428)
|..|++|+|+..|+|+|++.+|.-
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~PAn 258 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNPAN 258 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCccH
Confidence 999999999999999999998753
No 373
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.3e-34 Score=372.49 Aligned_cols=214 Identities=25% Similarity=0.337 Sum_probs=149.4
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHh------cCCC----C-----------CCce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1249 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~------rl~~----~-----------~~G~ 1249 (1428)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999862 2699999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCeeCCCCCh----------HhHhcceEEEeCC------ccccCC--------------cHHHhcCcC---------
Q 000553 1250 ILVDGLNIINTPV----------RDLRGRFAVVPQS------PFLFEG--------------SLRDNLDPF--------- 1290 (1428)
Q Consensus 1250 I~IDG~di~~i~~----------~~lR~~i~~VpQd------p~lf~g--------------TIR~NLdp~--------- 1290 (1428)
|.||..+|..-++ +.+|.-++=.|+- +-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 6777666654332 3456555554442 223321 111111100
Q ss_pred ---CCCChH-----------------HHHHHHHHc----c---HHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1291 ---HMNDDL-----------------KIWSVLEKC----H---VKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1291 ---~~~~d~-----------------ei~~aL~~~----~---l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
..+.++ .+.++++-. . ..+.++.+||+. .++.....|||||+||++|||+|+
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 001111 111121111 1 112333448875 478888899999999999999999
Q ss_pred c---CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEE------eCCeEEEecChhHH
Q 000553 1343 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVEQGNPQTL 1411 (1428)
Q Consensus 1343 ~---~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl------~~G~ive~g~p~eL 1411 (1428)
+ +|+++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998764 588999999999999999999999 79999999999986
No 374
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.4e-35 Score=326.71 Aligned_cols=194 Identities=25% Similarity=0.336 Sum_probs=164.8
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 46999999999999999999999999999999999999999999999999987654 456788999
Q ss_pred EeCCccccC-CcHHHhcCcCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~----~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+||++.+++ .|++||+..... ..++++.++++..+ ++.........||+|||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~g---------l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVG---------LAGFEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcC---------CHHHhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999964321 12334444555444 4433444556899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhc-CEEEEE
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1397 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~-DrI~Vl 1397 (1428)
||+|||||++||+++.+.+.+.|++.. +++|+|+|||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999776 788776
No 375
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=369.94 Aligned_cols=216 Identities=19% Similarity=0.303 Sum_probs=182.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH-hcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1269 (1428)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 5899999999964 369999999999999999999999999999999999999999999999999988776543 4679
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC----C------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1338 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~----~------~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1338 (1428)
+||||++.+|++ |+++|+..... . +.++..+ .+.+.++.+|++........+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999988876 99999964311 0 1111111 123445555776555556668999999999999
Q ss_pred HHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1339 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1339 RALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|||+++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.+ ||||++|++|++++.|+++++..
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999998763 47899999999999986 89999999999999999988754
No 376
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.2e-35 Score=311.63 Aligned_cols=159 Identities=33% Similarity=0.518 Sum_probs=148.1
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcceE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1270 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~ 1270 (1428)
|+++|++++|+. .++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988775 45678899
Q ss_pred EEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000553 1271 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1350 (1428)
Q Consensus 1271 ~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlL 1350 (1428)
++|| ||+|||||++||||++++|++|+|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEE
Q 000553 1351 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVE 1404 (1428)
Q Consensus 1351 DEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive 1404 (1428)
||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. |||+++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998764 47899999999998876 89999999999976
No 377
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=368.63 Aligned_cols=216 Identities=19% Similarity=0.312 Sum_probs=181.6
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHh-Hhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1269 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999997665444 46789
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
+|+||+|.+|+. |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988876 99999975321 11111111 123445555776555555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
+.+|++|||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999998753 47899999999999876 79999999999999999887643
No 378
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=333.65 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=163.7
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------- 672 (1428)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG---R---TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57889998852 2 359999999999999999999999999999999999999999998764
Q ss_pred --cEEEEcCCCCCCcc-cHHHHHhcCCC----CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.|+|++|++.+++. ||+||+.++.. .++ ++..++++.+++.... .....+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHH
Confidence 38999999998876 99999987632 222 2344455555554322 33446899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~e 819 (1428)
|+||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999998765 99999999999999999888
Q ss_pred HHh
Q 000553 820 LAV 822 (1428)
Q Consensus 820 l~~ 822 (1428)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 379
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.5e-35 Score=349.92 Aligned_cols=203 Identities=26% Similarity=0.380 Sum_probs=170.5
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
...++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 12 ~~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~ 85 (375)
T PRK09452 12 SPLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAEN 85 (375)
T ss_pred CceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 345899999999963 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCCC---Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.++||+|++.+|.. ||+|||.|+... ++ ++.+++++..++....+. +..+|||||||||+
T Consensus 86 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~p~~LSgGq~QRVa 154 (375)
T PRK09452 86 RHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQR-----------KPHQLSGGQQQRVA 154 (375)
T ss_pred CCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 49999999998865 999999987432 22 244556666666654443 34589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHH
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
|||||+.+|+++|||||||+||+...+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++.
T Consensus 155 LARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 155 IARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999988776 33212 23789999999999865 59999999999999999999886
Q ss_pred hc
Q 000553 822 VS 823 (1428)
Q Consensus 822 ~~ 823 (1428)
..
T Consensus 234 ~~ 235 (375)
T PRK09452 234 EE 235 (375)
T ss_pred hC
Confidence 43
No 380
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=341.54 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=170.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|++|+|+.... ....+|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999974321 112469999999999999999999999999999999999999999998875
Q ss_pred ----cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.++||+|+| .+++.||.|||.|+.. .++ +++.++++..+|..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 389999998 7888999999998742 222 3456666666664332 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999988875 3321234789999999999885 59999999999999999999
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 381
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.1e-35 Score=322.20 Aligned_cols=194 Identities=23% Similarity=0.357 Sum_probs=164.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999986543 567889999
Q ss_pred EeCCcccc-CCcHHHhcCcCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000553 1272 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1349 (1428)
Q Consensus 1272 VpQdp~lf-~gTIR~NLdp~~~-~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILl 1349 (1428)
+||++.++ ..|+++|+..... ..++++.++++..++.+ .......+||+|||||++||||++++|++||
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNG---------FEDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChh---------hhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 4699999965432 34455556666655543 2233455799999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEE
Q 000553 1350 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILIL 1397 (1428)
Q Consensus 1350 LDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1397 (1428)
|||||++||+.+.+.+.+.|++.. +++|+|+|||+...+.+ ||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998754 48999999998776665 6999877
No 382
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.31 Aligned_cols=205 Identities=27% Similarity=0.416 Sum_probs=170.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|++++|+.... ...++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 789999999964321 113469999999999999999999999999999999999999999998865
Q ss_pred ----cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.|+||+|+| .+++.||+|||.|+.. .++ ++.+++++.++|..++. .....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 389999998 5888899999998632 222 34566777777754332 334568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecCh
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 817 (1428)
|||+|||||+.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999988876 332112 3789999999999876 5999999999999999999
Q ss_pred HHHHh
Q 000553 818 ADLAV 822 (1428)
Q Consensus 818 ~el~~ 822 (1428)
+++..
T Consensus 231 ~~~~~ 235 (290)
T PRK13634 231 REIFA 235 (290)
T ss_pred HHHhc
Confidence 88754
No 383
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-35 Score=348.36 Aligned_cols=202 Identities=29% Similarity=0.395 Sum_probs=169.4
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------c
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~ 673 (1428)
.++++|+++.|+. ..+|+|+||++++||+++|+|||||||||||++|+|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4889999999863 2259999999999999999999999999999999999999999999976 4
Q ss_pred EEEEcCCCCCCc-ccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
|+||+|++-+|. .||+|||.|+.. .+ .++.+++++..+|+... ..+..+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 999999999986 599999998742 22 23455566666554322 345669999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHhc
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|||+.+|+++|||||||+||+.+.+++.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998887632211123789999999999865 5999999999999999999998653
No 384
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=339.54 Aligned_cols=204 Identities=29% Similarity=0.401 Sum_probs=170.5
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|++++|+.... ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999964211 2359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCCC--CCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998732 232 34566777777764433 33458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+.+++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999988775 333122 378999999999998889999999999999999988875
Q ss_pred hc
Q 000553 822 VS 823 (1428)
Q Consensus 822 ~~ 823 (1428)
..
T Consensus 229 ~~ 230 (279)
T PRK13650 229 SR 230 (279)
T ss_pred cC
Confidence 43
No 385
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=340.14 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=170.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.... ..+.+|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4789999999964221 112469999999999999999999999999999999999999999998765
Q ss_pred ---cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHH
Q 000553 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1428)
Q Consensus 673 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 740 (1428)
.||||+|+| .+++.|++|||.|+.. .++ ++.+++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 489999998 5778899999998642 232 23455666666641 11234566799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 741 RvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|++|||||+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988876 433122 3789999999999875 59999999999999999999
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 386
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=373.32 Aligned_cols=222 Identities=24% Similarity=0.348 Sum_probs=180.8
Q ss_pred ccEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCC---------
Q 000553 1190 GLIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--------- 1258 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~--------- 1258 (1428)
..|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 369999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred -CCChH---hHh-cceEEEeCCc--cccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCc---hhhhcC
Q 000553 1259 -NTPVR---DLR-GRFAVVPQSP--FLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKES 1323 (1428)
Q Consensus 1259 -~i~~~---~lR-~~i~~VpQdp--~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~ 1323 (1428)
+.+.. .+| ++|++|+|+| .+++. ||++|+.... ..+..+.. + .+.+.++.+|+. ......
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~---~--~~~~~l~~~gL~~~~~~~~~~ 165 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM---V--EAKRMLDQVRIPEAQTILSRY 165 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH---H--HHHHHHHHCCCCChhhHHhCC
Confidence 22222 334 5799999999 57764 9999986421 11222211 1 123344445663 345666
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhhhh-cCEEEEEeCC
Q 000553 1324 GISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHG 1400 (1428)
Q Consensus 1324 G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G 1400 (1428)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|
T Consensus 166 ~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G 245 (623)
T PRK10261 166 PHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQG 245 (623)
T ss_pred CccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCC
Confidence 77899999999999999999999999999999999999999999998864 3 7899999999999876 8999999999
Q ss_pred eEEEecChhHHhccCC
Q 000553 1401 HLVEQGNPQTLLQDEC 1416 (1428)
Q Consensus 1401 ~ive~g~p~eLl~~~~ 1416 (1428)
++++.|++++++.++.
T Consensus 246 ~i~~~g~~~~~~~~~~ 261 (623)
T PRK10261 246 EAVETGSVEQIFHAPQ 261 (623)
T ss_pred eecccCCHHHhhcCCC
Confidence 9999999999986543
No 387
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-35 Score=301.03 Aligned_cols=193 Identities=25% Similarity=0.379 Sum_probs=168.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
|+|+|++-.|+.. ..+|+|+||+|++||++.++||||||||||+|+|.++..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6889999998754 2359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCC-cccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWIL-SGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~-~~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
+||+|+|+--|. +-||.||+.|... .. +++..++++..+|.+....+|. .||||||||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 599999999865 5599999998643 22 3456678888899988888886 899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|+||||+..+|++||-||||-+|||..+..|++- +..-...|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999875 33324568899999999999987 5689999999998643
No 388
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=339.62 Aligned_cols=206 Identities=23% Similarity=0.389 Sum_probs=168.4
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+...+ ....+|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999964221 113469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|+.+. ....+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV----------MSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHH
Confidence 379999998 6788899999998632 2332 233445555553221 234567999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecC
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 816 (1428)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988876 33211 24789999999999875 599999999999999999
Q ss_pred hHHHHh
Q 000553 817 SADLAV 822 (1428)
Q Consensus 817 ~~el~~ 822 (1428)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 389
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=345.75 Aligned_cols=201 Identities=32% Similarity=0.442 Sum_probs=167.5
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------c
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~ 673 (1428)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3788999999853 2359999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCCC-------Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
|+||+|++.++.. ||+|||.|+... +. ++..++++..+|.... .....+||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 9999999999864 999999987431 21 2344555555554322 34456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~e 819 (1428)
|+|||||+.+|+++|||||||+||+.+.+.+.+. +.... ..++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 33312 23689999999999865 499999999999999999999
Q ss_pred HHhc
Q 000553 820 LAVS 823 (1428)
Q Consensus 820 l~~~ 823 (1428)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8643
No 390
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=364.24 Aligned_cols=212 Identities=24% Similarity=0.348 Sum_probs=179.5
Q ss_pred EEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcceEEE
Q 000553 1194 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1272 (1428)
Q Consensus 1194 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~V 1272 (1428)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|+++++|
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 469999999999999999999999999999999999999999999999999976554 4467889999
Q ss_pred eCCccccCC-cHHHhcCcCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1273 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1273 pQdp~lf~g-TIR~NLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
||++.+|.. |+++|+..... .+.++.++ ...+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987765 99999974321 12222221 1334555567766666667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999998753 47899999999999876 8999999999999999988874
No 391
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=364.43 Aligned_cols=211 Identities=24% Similarity=0.381 Sum_probs=177.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1269 (1428)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 5899999999964 369999999999999999999999999999999999999999999999999975543 4567889
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHc
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1342 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~------~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1342 (1428)
+||||+|.+|++ |+++|+..... .+..+..+ .+.+.++.+|++.........||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 11112111 2334555557765455566689999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecCh
Q 000553 1343 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNP 1408 (1428)
Q Consensus 1343 ~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p 1408 (1428)
++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999998764 47899999999999876 899999999999977654
No 392
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.7e-35 Score=321.59 Aligned_cols=193 Identities=20% Similarity=0.249 Sum_probs=162.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999875 34567889999
Q ss_pred EeCCccccC-CcHHHhcCcCCCC--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+||++.+++ .|+++|+...... .+.+ +.+.++.++++...+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~---------~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVG---------ITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHH---------HHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998875 6999998643211 1122 334444445544444444579999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEE
Q 000553 1349 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILI 1396 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~V 1396 (1428)
||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-++
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999998753 58999999999999999986543
No 393
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.8e-35 Score=320.99 Aligned_cols=189 Identities=29% Similarity=0.438 Sum_probs=161.5
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+... ..+++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4689999999996421 2359999999999999999999999999999999999999999999875
Q ss_pred --cEEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000553 673 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1428)
.|+||+|+|.++++|++||+.+...+++++. .+++. ++++..+||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~---~~~l~---------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEI---YGALR---------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHH---HHHhh---------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 4999999999999999999987554443332 22221 345678999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecC
Q 000553 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 751 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 816 (1428)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999888776 433 345789999999999988899999999999988775
No 394
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=339.71 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=169.1
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.... ....+|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3789999999964321 112469999999999999999999999999999999999999999998742
Q ss_pred -------------------------cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhc
Q 000553 673 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 718 (1428)
Q Consensus 673 -------------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~ 718 (1428)
.||||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5788899999998742 232 3445566666664322
Q ss_pred ccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh
Q 000553 719 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 798 (1428)
Q Consensus 719 l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 798 (1428)
.+....+||||||||++|||||+.+|+++||||||++||+...+.+.+. +......|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2345679999999999999999999999999999999999998888776 3321234789999999999865
Q ss_pred -cCCEEEEEeCCeEEEecChHHHHh
Q 000553 799 -AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 799 -~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999998754
No 395
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.1e-35 Score=346.87 Aligned_cols=202 Identities=27% Similarity=0.380 Sum_probs=169.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC--eEEEEcC---------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~--G~i~~~~--------- 672 (1428)
..++++|+++.|.. . .+|+|+||++++|++++|+|||||||||||++|+|+.+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---N---TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC---e---EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999963 1 35999999999999999999999999999999999999999 9999875
Q ss_pred --cEEEEcCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 --SIAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.|+||+|++.+|.. ||+|||.|+.. .+ .++.+++++..+|+...+ ....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHH
Confidence 49999999999865 99999998642 22 234556666666654333 34458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC--CceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~--~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~e 819 (1428)
+|||||..+|+++|||||||+||+...+.+.+.+ .....+ +.|+|+|||+.+.+. .||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEI-AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH-HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888763 321222 689999999999865 599999999999999999999
Q ss_pred HHhc
Q 000553 820 LAVS 823 (1428)
Q Consensus 820 l~~~ 823 (1428)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8643
No 396
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-35 Score=329.84 Aligned_cols=196 Identities=22% Similarity=0.290 Sum_probs=145.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.+-+.||+|.|+.. .|.+++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|+..=+ -|=+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 56789999999754 578999999999999999999999999999999999999999987543 255788
Q ss_pred EEeCCcc-cc--CCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPF-LF--EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~-lf--~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
..-|..- -+ ..|--+.|.-.-...-++-..+|-..|| .+... -.-..||||||-|+++|-.-++.|+
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL---------~sHAHTikikdLSGGQKaRValaeLal~~PD 724 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGL---------ASHAHTIKIKDLSGGQKARVALAELALGGPD 724 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhh---------hhccceEeeeecCCcchHHHHHHHHhcCCCC
Confidence 8888652 11 2243343321111122333444444443 32211 0123699999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhhcCE-EEEEeCCeEEEe-cChh
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDE-ILILDHGHLVEQ-GNPQ 1409 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~~Dr-I~Vl~~G~ive~-g~p~ 1409 (1428)
||||||||.+||.++-..+-++|+++ +..||+|+|+-..|..-|. .+|+++-.|-|. |.++
T Consensus 725 vlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFe 787 (807)
T KOG0066|consen 725 VLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFE 787 (807)
T ss_pred EEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhccccHH
Confidence 99999999999999999999999876 4469999999998876543 566666555543 4443
No 397
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=348.62 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=168.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------c
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~ 673 (1428)
.++++|+++.|.. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~---~---~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD---V---VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC---e---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3789999999853 1 359999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
|+|++|++.++.. ||+|||.|+.. .+ .++.+++++.++++...+ ....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHH
Confidence 9999999998865 99999998743 22 234566677777654333 34458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHh
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|||+.+|+++|||||||+||+...+.+.+. +..... .+.|+|+|||+++.+. .||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999988776 332122 3789999999999875 599999999999999999998854
No 398
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-35 Score=329.00 Aligned_cols=198 Identities=33% Similarity=0.455 Sum_probs=164.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 76 (239)
T cd03296 3 IEVRNVSKRFGD---F---VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNV 76 (239)
T ss_pred EEEEeEEEEECC---E---EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccce
Confidence 678999999863 2 359999999999999999999999999999999999999999998875 48
Q ss_pred EEEcCCCCCCc-ccHHHHHhcCCCC-------Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 675 AYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 675 ~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
+|++|+|.++. .|++||+.++... +. ++..+.++.++++.. ......+||||||||+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl 145 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRV 145 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHH
Confidence 99999998885 5999999876321 21 223444555555332 2344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el 820 (1428)
+||||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 146 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 146 ALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999999988875 333122 3789999999999865 4999999999999999998887
Q ss_pred H
Q 000553 821 A 821 (1428)
Q Consensus 821 ~ 821 (1428)
.
T Consensus 225 ~ 225 (239)
T cd03296 225 Y 225 (239)
T ss_pred h
Confidence 5
No 399
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-34 Score=362.34 Aligned_cols=221 Identities=24% Similarity=0.402 Sum_probs=179.9
Q ss_pred cEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCceEEECCeeCCCCChH
Q 000553 1191 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~-----~~G~I~IDG~di~~i~~~ 1263 (1428)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 24699999999999999999999999999999999999987 799999999999877654
Q ss_pred h---Hh-cceEEEeCCcc--ccC-CcHHHhcCcC----CCCChHHHHHHHHHccHHHHHHhCCCch---hhhcCCCCCCh
Q 000553 1264 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1329 (1428)
Q Consensus 1264 ~---lR-~~i~~VpQdp~--lf~-gTIR~NLdp~----~~~~d~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSg 1329 (1428)
. .| +++++|||+|. +++ -|+++|+... ...+.++..+ .+.+.++.+|++. ........|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG-----EILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899987521 1122221111 1233444446642 23556678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1330 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1330 GQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998854 37899999999999876 8999999999999999
Q ss_pred ChhHHhccCC
Q 000553 1407 NPQTLLQDEC 1416 (1428)
Q Consensus 1407 ~p~eLl~~~~ 1416 (1428)
++++++..+.
T Consensus 240 ~~~~~~~~~~ 249 (529)
T PRK15134 240 RAATLFSAPT 249 (529)
T ss_pred CHHHHhhCCC
Confidence 9999976543
No 400
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-35 Score=301.82 Aligned_cols=213 Identities=25% Similarity=0.364 Sum_probs=182.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
|+.+|++++-. .+.+|+++||+++|||.+||+||||||||||+++|.|...|++|++.++|+++++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889987764 3569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCccc-cCCcHHHhcCcCC----C---C-ChHH-HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1272 VPQSPFL-FEGSLRDNLDPFH----M---N-DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1272 VpQdp~l-f~gTIR~NLdp~~----~---~-~d~e-i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
.||+..+ |+-|++|-+.++. . . .|++ ..+++.++.+..+- +..-..||||||||+.|||.|
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la---------~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA---------GRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh---------ccchhhcCchHHHHHHHHHHH
Confidence 9999876 8999999875442 1 1 2233 45677777654322 222336999999999999999
Q ss_pred cc------CCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1342 LK------SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1342 L~------~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
.. ++++|+||||||+||..-...+.++.|+.. +++.|+.|=|+|+.... ||||++|.+||++..|+|++.+.
T Consensus 151 aQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 151 AQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred HHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhcC
Confidence 86 357999999999999999999999998875 58999999999998765 79999999999999999999998
Q ss_pred cC
Q 000553 1414 DE 1415 (1428)
Q Consensus 1414 ~~ 1415 (1428)
.+
T Consensus 231 ~E 232 (259)
T COG4559 231 DE 232 (259)
T ss_pred HH
Confidence 64
No 401
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=9.7e-35 Score=325.63 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=173.6
Q ss_pred CCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC---------
Q 000553 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1428)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------- 672 (1428)
....++++|+++.|+.... ..+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 3467899999999974321 2359999999999999999999999999999999999999999998875
Q ss_pred ----cEEEEcCCCCCCcccHHHHHhcCCCC-ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHH
Q 000553 673 ----SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1428)
Q Consensus 673 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1428)
.++|++|+|.+++.|++||+.++... ....+.+..+...++.-++.++.|.++..+.+..+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 48999999999999999999876432 2222333334455666778888787788899999999999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeE
Q 000553 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1428)
Q Consensus 748 ly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 811 (1428)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988876 333 3346899999999999988999999999874
No 402
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.6e-35 Score=328.50 Aligned_cols=197 Identities=28% Similarity=0.396 Sum_probs=162.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc-----cCCCeEEEEcC--------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG-------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~-----~~~~G~i~~~~-------- 672 (1428)
++++|+++.|+. ..+|+|+||++++||+++|+|+||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 357889998853 13599999999999999999999999999999999999 99999998765
Q ss_pred -------cEEEEcCCCCCCcccHHHHHhcCCCC----C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 -------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|++.+++.|++||+.++... + +++..++++.+++...+...++ +.+||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG 145 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGG 145 (227)
T ss_pred HHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHH
Confidence 38999999998878999999875321 1 2344556666666544332211 4689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecC
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 816 (1428)
||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+. .||++++|++|++++.|+
T Consensus 146 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 146 QQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999988876 333 222389999999999876 599999999999999987
Q ss_pred hHH
Q 000553 817 SAD 819 (1428)
Q Consensus 817 ~~e 819 (1428)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 654
No 403
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=335.61 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=168.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.. ..+|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999999631 2359999999999999999999999999999999999999999998876
Q ss_pred -cEEEEcCCC--CCCcccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.|+|++|+| .+++.||+||+.|+.. .+ ++++.++++.++|...... ....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHH
Confidence 489999998 5788899999998632 22 2355667777777644433 3348999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el 820 (1428)
+||||+..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988876 4331234789999999999985 5999999999999999998654
No 404
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-34 Score=322.31 Aligned_cols=195 Identities=24% Similarity=0.315 Sum_probs=164.3
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|++ +++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 6999999999964 3699999999999999999999999999999999999999999999999998752 3456799
Q ss_pred EEeCCccccCC-cHHHhcCcCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1271 VVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1271 ~VpQdp~lf~g-TIR~NLdp~~----~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++||+|.+|++ |+++|+.... ...++.+.++++. +|++.........||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAI---------VGLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHH---------cCChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 9999985421 1112223333333 35544444555689999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeC
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1399 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1399 (1428)
+||+|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999997653 47899999999999976 799999875
No 405
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-35 Score=329.91 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=170.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc---CCCeEEEEcC---------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~---~~~G~i~~~~--------- 672 (1428)
.++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK---K---QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC---E---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999963 2 35999999999999999999999999999999999974 6899998875
Q ss_pred ----cEEEEcCCCCCCcccHHHHHhcCCCC---------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+++.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 48999999999999999999875311 12245567777777654432 23456779999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|||+||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999888776 433 335789999999999876 59999999999999999988
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 406
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=324.54 Aligned_cols=191 Identities=30% Similarity=0.407 Sum_probs=158.2
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cEE
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i~ 675 (1428)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS---V---RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC---e---eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57889998853 2 359999999999999999999999999999999999999999998865 489
Q ss_pred EEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHH
Q 000553 676 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1428)
Q Consensus 676 y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARa 747 (1428)
|++|+|.++. .|++||+.++.. .+. ++.+++++.+++...+. ....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHH
Confidence 9999998775 599999987532 122 23455666666654333 3445899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 748 ly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 332122 37899999999998764 9999999999998764
No 407
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.6e-35 Score=393.22 Aligned_cols=219 Identities=24% Similarity=0.332 Sum_probs=190.6
Q ss_pred ccEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1190 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1190 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
..|+++|++++|+++...+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.+ .....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996444579999999999999999999999999999999999999999999999999975 566789999
Q ss_pred EEEeCCccccCC-cHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
+++||++.+|+. |++|||.++.. .+.++..+ ...+.++.+||+...+....+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 1234455557776677777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++.+|.++
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999988779999999999999976 899999999999999999999764
No 408
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=9.5e-35 Score=362.37 Aligned_cols=212 Identities=19% Similarity=0.262 Sum_probs=180.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 35999999999999999999999999999999999999999999999999887777777888899
Q ss_pred EEeCCccc--c-------CCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1271 VVPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1271 ~VpQdp~l--f-------~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++||+|.+ + .-|+++|+.... ..++++.++++. +|++.........||||||||++|||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~---------~~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQ---------FGITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHH---------cCCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999753 2 348899885421 112233344444 4555445555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhcc
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~ 1414 (1428)
+++|++|||||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 99999999999999999999999999998764 47899999999999987 799999999999999999998764
No 409
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-35 Score=318.63 Aligned_cols=196 Identities=27% Similarity=0.434 Sum_probs=168.2
Q ss_pred cEEEEEEEEEECCCC-------CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH
Q 000553 1191 LIEFQNVTMRYKPSL-------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1263 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~-------~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~ 1263 (1428)
.++.+|++..|+... ..+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999997432 36899999999999999999999999999999999999999999999999987666
Q ss_pred hHhcceEEEeCCccccCCcHHHhcCcCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHcc
Q 000553 1264 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1343 (1428)
Q Consensus 1264 ~lR~~i~~VpQdp~lf~gTIR~NLdp~~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~ 1343 (1428)
....++++.+.|+.+|+.+. ........||||||||++|||||.-
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~--------~~~ryPhelSGGQrQRi~IARALal 126 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEE--------FLYRYPHELSGGQRQRIGIARALAL 126 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHH--------HhhcCCcccCchhhhhHHHHHHHhh
Confidence 11123456666666664332 3445566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHH
Q 000553 1344 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFS 1420 (1428)
Q Consensus 1344 ~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~ 1420 (1428)
+|++++.|||||+||.-..+.|.+.+.+.- .+-|.++|||+++.++. ||||.||..|+|||.|+-+++.+++.-.|-
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~HpYT 206 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLHPYT 206 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCCHHH
Confidence 999999999999999999999999987653 38899999999999997 799999999999999999999998876666
Q ss_pred HHH
Q 000553 1421 SFV 1423 (1428)
Q Consensus 1421 ~l~ 1423 (1428)
+..
T Consensus 207 k~L 209 (268)
T COG4608 207 KAL 209 (268)
T ss_pred HHH
Confidence 544
No 410
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.8e-35 Score=329.15 Aligned_cols=198 Identities=25% Similarity=0.360 Sum_probs=163.1
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------- 672 (1428)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG---L---VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC---E---EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 57888998852 2 359999999999999999999999999999999999999999998865
Q ss_pred cEEEEcCCCCCCcc-cHHHHHhcCCCC-------------C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCcc
Q 000553 673 SIAYVPQVPWILSG-TIRDNILFGKNY-------------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1428)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------------~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~L 734 (1428)
.++|++|+|.++.+ ||+|||.++... + .++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 999999876321 1 11233334444332 2335566799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEE
Q 000553 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 813 (1428)
Q Consensus 735 SGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 813 (1428)
|||||||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988886 33212257899999999999865 99999999999999
Q ss_pred ecChHHHHh
Q 000553 814 IGSSADLAV 822 (1428)
Q Consensus 814 ~g~~~el~~ 822 (1428)
.|+++++..
T Consensus 224 ~~~~~~~~~ 232 (236)
T cd03219 224 EGTPDEVRN 232 (236)
T ss_pred ecCHHHhcc
Confidence 999888753
No 411
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.52 Aligned_cols=204 Identities=24% Similarity=0.332 Sum_probs=168.7
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~------ 672 (1428)
..++++|+++.|+. . .+|+|+||++++||+++|+||||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 45899999999953 2 35999999999999999999999999999999999864 5899998764
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCC---C-C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999988999999987521 1 1 234455566666643332 23456678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 814 (1428)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988776 433 344689999999999986 4999999999999999
Q ss_pred cChHHHHh
Q 000553 815 GSSADLAV 822 (1428)
Q Consensus 815 g~~~el~~ 822 (1428)
|+++++..
T Consensus 230 g~~~~~~~ 237 (253)
T PRK14242 230 GPTEQIFT 237 (253)
T ss_pred CCHHHHHc
Confidence 99888753
No 412
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-35 Score=294.38 Aligned_cols=219 Identities=24% Similarity=0.405 Sum_probs=187.2
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCC----------
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---------- 1260 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i---------- 1260 (1428)
.++++|+..+|++. .|||+||++.++|+.|.|+|-|||||||+++++-=+-.|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68999999999765 499999999999999999999999999999999999999999999999887532
Q ss_pred ---ChHhHhcceEEEeCCccccCC-cHHHhcC--cCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000553 1261 ---PVRDLRGRFAVVPQSPFLFEG-SLRDNLD--PFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1331 (1428)
Q Consensus 1261 ---~~~~lR~~i~~VpQdp~lf~g-TIR~NLd--p~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1331 (1428)
.++.+|+++++|.|.--|++- ||-||.- |-. ...++.+..| ..++...|++..-...+..|||||
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A------e~~L~kVGi~ek~~~YP~~LSGGQ 157 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA------EKYLAKVGIAEKADAYPAHLSGGQ 157 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH------HHHHHHhCchhhhhcCccccCchH
Confidence 256789999999999988875 9999973 321 2223333222 123334466666666777899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChh
Q 000553 1332 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQ 1409 (1428)
Q Consensus 1332 rQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~ 1409 (1428)
+||.+|||||.-+|+++++|||||+||++---.+.++|++.. .|+|.++|||-+...++ +..|+.+.+|+|-|+|+|+
T Consensus 158 QQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~ 237 (256)
T COG4598 158 QQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPE 237 (256)
T ss_pred HHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChH
Confidence 999999999999999999999999999999988888888765 59999999999999998 5999999999999999999
Q ss_pred HHhccCCc
Q 000553 1410 TLLQDECS 1417 (1428)
Q Consensus 1410 eLl~~~~s 1417 (1428)
++..++.|
T Consensus 238 qvf~nP~S 245 (256)
T COG4598 238 QVFGNPQS 245 (256)
T ss_pred HHhcCCCC
Confidence 99999886
No 413
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=326.14 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 4788999998853 2 359999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCCCCcccHHHHHhcCCCC---ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000553 673 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~---~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARal 748 (1428)
.++|++|+|.+++.|++||+.++..+ +.++..+.++.++++.+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 234555667777665332 1345668999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHh
Q 000553 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 749 y~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998888775 333122 37899999999999764 99999999999999999888753
No 414
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-35 Score=324.56 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=161.5
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------cEEEEc
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 678 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------~i~y~~ 678 (1428)
+++|+++.|+.... ..++|+|+||+|++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGGG--AVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCCc--ceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 57889998863211 12469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCc-ccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000553 679 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1428)
Q Consensus 679 Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1428)
|+|.++. .|++||+.++.. .+ .++..+.++.++++..+. ....+||||||||++||||++.
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9998887 699999987532 11 234556667776654433 2345899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEe--CCeEEEecCh
Q 000553 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMD--KGQVKWIGSS 817 (1428)
Q Consensus 751 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~--~G~i~~~g~~ 817 (1428)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+. .||++++|+ +|+++++++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999988886 33211 23789999999999875 599999999 7999987764
No 415
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.8e-35 Score=321.31 Aligned_cols=188 Identities=27% Similarity=0.415 Sum_probs=157.5
Q ss_pred EEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------cEEEE
Q 000553 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 677 (1428)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------~i~y~ 677 (1428)
++|+++.|+.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 56778887531 2359999999999999999999999999999999999999999998876 48999
Q ss_pred cCCC--CCCcccHHHHHhcCCC---CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000553 678 PQVP--WILSGTIRDNILFGKN---YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1428)
Q Consensus 678 ~Q~p--~l~~~ti~~nI~~g~~---~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~ 752 (1428)
+|+| .+++.|++||+.++.. .++++.+++++.+++...... ...+||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 4677899999988643 233466778888887644332 33489999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEE
Q 000553 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1428)
Q Consensus 753 ~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 812 (1428)
+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999988775 43312357899999999999874 9999999999874
No 416
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.4e-34 Score=361.62 Aligned_cols=214 Identities=24% Similarity=0.368 Sum_probs=178.5
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCceEEECCeeCCCCChHh-Hhcc
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1268 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~~ 1268 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 4699999999999999999999999999999999999987 7999999999998777544 4678
Q ss_pred eEEEeCCccccCC-cHHHhcCcCCC-------CChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000553 1269 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1269 i~~VpQdp~lf~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSgGQrQrl~LAR 1339 (1428)
++||||+|.+|+. |+++|+..... .+.++..+ ...+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988876 99999965321 11111111 133445555665432 2335579999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++..
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 9999999999999999999999999999998753 47899999999999976 8999999999999999887653
No 417
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=332.47 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=171.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.. . .++|+|+||+|++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58999999999632 1 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.|+|++|+| .+++.||+|||.++.. .++ ++..++++.++|+..+... ...||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHH
Confidence 489999998 4667899999988632 222 3456677777776655443 348999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988886 333122 378999999999999889999999999999999988875
Q ss_pred h
Q 000553 822 V 822 (1428)
Q Consensus 822 ~ 822 (1428)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 418
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.3e-35 Score=324.83 Aligned_cols=190 Identities=25% Similarity=0.403 Sum_probs=157.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+... +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGGH----QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCCC----eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 57899999985321 2359999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999998876 599999987521 11 234566677777654333 2335899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeE
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 811 (1428)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33312347899999999999874 999999999974
No 419
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=342.92 Aligned_cols=204 Identities=28% Similarity=0.365 Sum_probs=167.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|++++|+... ....+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~--~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGG--RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCC--CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 67899999996321 012469999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.|+|++|++.++. .|++||+.++.. .+. ++..+.++..+|... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 4999999999886 699999987632 222 233445555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~e 819 (1428)
|+||||++.+|+++||||||++||+.+.+.+.+. +... ...++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 3321 1237899999999999875 99999999999999999998
Q ss_pred HHhc
Q 000553 820 LAVS 823 (1428)
Q Consensus 820 l~~~ 823 (1428)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 420
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-34 Score=323.98 Aligned_cols=197 Identities=21% Similarity=0.283 Sum_probs=163.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|+++.|+. . .+|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD---F---EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC---E---EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 367888988853 2 359999999999999999999999999999999999999999998875 4
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|++.++.. |++||+.++.. .+ +++.++.++.++++.... ....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHH
Confidence 8999999988765 99999986421 22 234556677777654332 23458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999988876 332122 37899999999999875 999999999999998887664
No 421
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-35 Score=333.56 Aligned_cols=187 Identities=29% Similarity=0.410 Sum_probs=156.8
Q ss_pred cceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------------cEEEEcCCCCCCc-c
Q 000553 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 686 (1428)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~ 686 (1428)
.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++. .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998754 4899999999885 5
Q ss_pred cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000553 687 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1428)
Q Consensus 687 ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDe 759 (1428)
|++||+.++.. ++ +++..++++.+++...+... ..+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKY-----------PDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987521 22 23455667777776544433 34899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHh
Q 000553 760 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 760 p~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||++||+.+.+.+.+.+..-....++|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999998887632111123789999999999875 599999999999999999988754
No 422
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=326.40 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=175.1
Q ss_pred cEEEEEEEEEECCC------------------CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEE
Q 000553 1191 LIEFQNVTMRYKPS------------------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1252 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~------------------~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~I 1252 (1428)
.|+++||+..|+.. ..++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 57888888877542 235899999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCChHhHhcceEEEeCCccccC-CcHHHhcCcC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCC
Q 000553 1253 DGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1328 (1428)
Q Consensus 1253 DG~di~~i~~~~lR~~i~~VpQdp~lf~-gTIR~NLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1328 (1428)
||. +++++|++.+++ .|+++|+... ...+.++..+.. .+.++..+++..+......||
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~~~~LS 145 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT-----PKIIEFSELGEFIYQPVKKYS 145 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCchhhcCCcccCC
Confidence 994 457788887665 4999998542 122333332221 222333367666777778999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1329 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1329 gGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
+|||||++||||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g 225 (264)
T PRK13546 146 SGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYG 225 (264)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999987753 48899999999999876 8999999999999999
Q ss_pred ChhHHhccCCcHHHHH
Q 000553 1407 NPQTLLQDECSVFSSF 1422 (1428)
Q Consensus 1407 ~p~eLl~~~~s~f~~l 1422 (1428)
++++++++.+..|+..
T Consensus 226 ~~~~~~~~~~~~~~~~ 241 (264)
T PRK13546 226 ELDDVLPKYEAFLNDF 241 (264)
T ss_pred CHHHHHHHhHHHHHHH
Confidence 9999998665444443
No 423
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=343.49 Aligned_cols=204 Identities=26% Similarity=0.364 Sum_probs=169.1
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
...++++|+++.|.. . .+|+|+||++++|++++|+|||||||||||++|+|..+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~---~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---Q---HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 346899999999853 1 359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.||||+|++-+|.. ||.|||.|+.. .+. ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 48999999999865 99999998742 222 2344556666665332 3345589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|||||+.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999988876532111224789999999999864 599999999999999999999864
Q ss_pred c
Q 000553 823 S 823 (1428)
Q Consensus 823 ~ 823 (1428)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 3
No 424
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=369.40 Aligned_cols=217 Identities=24% Similarity=0.361 Sum_probs=188.8
Q ss_pred cEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhH---
Q 000553 1191 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~l--- 1265 (1428)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 58999999999643 2469999999999999999999999999999999999999999999999999999887654
Q ss_pred -hcceEEEeCCccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000553 1266 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1340 (1428)
Q Consensus 1266 -R~~i~~VpQdp~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1340 (1428)
|++++++||+|.+|++ |+.||++... ..+.++ .+....+.++.+|++..++..+..||+||+||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 6789999999999975 9999996421 111111 11223455666688877777888999999999999999
Q ss_pred HccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhhcCEEEEEeCCeEEEecChhHHh
Q 000553 1341 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVEQGNPQTLL 1412 (1428)
Q Consensus 1341 LL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~g~p~eLl 1412 (1428)
|+++|++|||||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..|||+++|++|++++.|+++|..
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999998764 489999999999999889999999999999999999886
No 425
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=331.92 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=167.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|++++|+.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5789999998531 2359999999999999999999999999999999999999999998764
Q ss_pred -cEEEEcCCCC--CCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.++|++|+|. +++.|++|||.++.. .++ ++.+++++.++++... ......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHH
Confidence 3899999986 567899999988632 222 3345556666665432 334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
+||||++.+|+++||||||++||+.+.+.+++. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999988876 3321234789999999999998899999999999999999888753
No 426
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.75 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=162.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.... ..++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCCCCCcc-cHHHHHhcCC---CCCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 -----SIAYVPQVPWILSG-TIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
.++|++|+|.++.. |++||+.++. ..++ ++..++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988865 9999998742 1222 234556666665432 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEeCCeEEEecC
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 816 (1428)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999988875 33211 24789999999999999899999999999998764
No 427
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=327.93 Aligned_cols=204 Identities=26% Similarity=0.335 Sum_probs=167.9
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------ 672 (1428)
..++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999853 1 259999999999999999999999999999999999987 489998754
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCCC----Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|+|.+++.||+|||.++... +. ++..++++.+++...+. .....++.+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCC
Confidence 38999999999989999999886421 21 23344555555532221 12344677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 814 (1428)
|||||||+||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988876 433 3456899999999999754 999999999999999
Q ss_pred cChHHHHh
Q 000553 815 GSSADLAV 822 (1428)
Q Consensus 815 g~~~el~~ 822 (1428)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988754
No 428
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.7e-34 Score=327.96 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=166.9
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCC-----CeEEEEcC--------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~-----~G~i~~~~-------- 672 (1428)
++++|+++.|+. . .+++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678999999863 1 2599999999999999999999999999999999999998 99998754
Q ss_pred -------cEEEEcCCCCCCcccHHHHHhcCCC----CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 -------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 -------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|++++++.|++||+.++.. .+. ++..++++..++..++. ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 3899999999988999999987532 121 23445555556653221 1234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecC
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 816 (1428)
||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999988775 433 334589999999999876 599999999999999999
Q ss_pred hHHHHh
Q 000553 817 SADLAV 822 (1428)
Q Consensus 817 ~~el~~ 822 (1428)
++++..
T Consensus 227 ~~~~~~ 232 (247)
T TIGR00972 227 TEQIFT 232 (247)
T ss_pred HHHHHh
Confidence 888753
No 429
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-34 Score=322.79 Aligned_cols=198 Identities=26% Similarity=0.439 Sum_probs=164.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|+++.|+.. + .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 1 l~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 3578899988532 1 2359999999999999999999999999999999999999999998865 3
Q ss_pred EEEEcCCCCCC-cccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWIL-SGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~-~~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|+|.++ +.|++||+.++.. .+ +++.+++++.+++.... .....+||||||||++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 145 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLA 145 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHH
Confidence 89999999887 5699999986421 22 23455667777665332 233458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 146 ~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 146 IALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999988876 333 3346899999999999865 999999999999999988764
No 430
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.8e-34 Score=327.29 Aligned_cols=198 Identities=25% Similarity=0.374 Sum_probs=163.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|..+ ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPNG-----KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCCC-----cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 5688999988521 2359999999999999999999999999999999999999999998865
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCCC---------------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCc
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY---------------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~---------------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~ 733 (1428)
.++|++|++.++. .|++||+.++... +.++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998876 5999999875310 12234455555555432 2345678
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeE
Q 000553 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQV 811 (1428)
Q Consensus 734 LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 811 (1428)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999999888776 333122 3789999999999985 5999999999999
Q ss_pred EEecChHHH
Q 000553 812 KWIGSSADL 820 (1428)
Q Consensus 812 ~~~g~~~el 820 (1428)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 431
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-34 Score=323.43 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.5
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------- 672 (1428)
+++|+++.|+.... ...+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57899999864210 12469999999999999999999999999999999999999999998754
Q ss_pred ---cEEEEcCCCCCCcc-cHHHHHhcCCCC---C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|.++.. |++||+.++..+ + +++..++++..+++... .....+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-----------NHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hcChhhcCHHHHHH
Confidence 48999999988876 999999876432 1 23455566666654332 34456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeE
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i 811 (1428)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999988776 333122 37899999999999888999999999974
No 432
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.9e-34 Score=335.98 Aligned_cols=202 Identities=25% Similarity=0.374 Sum_probs=167.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999953 2359999999999999999999999999999999999999999999875
Q ss_pred -cEEEEcCCCCCCc-ccHHHHHhc-CCC--CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 -SIAYVPQVPWILS-GTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~-g~~--~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.||||||+|.++. .|++||+.| +.. .+. ++.+++++.++|.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999998875 599999985 321 122 2334455555554322 2233589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||||+.++|++++|||||++||+...+.+++. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 43312347899999999999875 99999999999999999999865
Q ss_pred c
Q 000553 823 S 823 (1428)
Q Consensus 823 ~ 823 (1428)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 433
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.7e-34 Score=323.17 Aligned_cols=201 Identities=22% Similarity=0.318 Sum_probs=163.0
Q ss_pred EEEEEEEEEECCC-----CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEEC--C--eeCCCCCh
Q 000553 1192 IEFQNVTMRYKPS-----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1262 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~-----~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~ID--G--~di~~i~~ 1262 (1428)
|+++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 7899999999631 2469999999999999999999999999999999999999999999998 4 36666665
Q ss_pred Hh---H-hcceEEEeCCccccCC-cHHHhcCcC---CCCChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000553 1263 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1333 (1428)
Q Consensus 1263 ~~---l-R~~i~~VpQdp~lf~g-TIR~NLdp~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQ 1333 (1428)
.. + +++++|+||+|.+|+. |+++|+... .....++..+ ...+.++.+|++.. ....+.+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARA-----RARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999988875 999998631 1111111111 12344455566543 34566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEE
Q 000553 1334 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILIL 1397 (1428)
Q Consensus 1334 rl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl 1397 (1428)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||||+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 47899999999999874 8999876
No 434
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-34 Score=316.90 Aligned_cols=194 Identities=23% Similarity=0.320 Sum_probs=162.9
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceE
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1270 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1270 (1428)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcE
Confidence 3789999999964 369999999999999999999999999999999999999999999999998753 1 2788999
Q ss_pred EEeCCcccc-CCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 000553 1271 VVPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1346 (1428)
Q Consensus 1271 ~VpQdp~lf-~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ 1346 (1428)
+++|++.++ ..|+++|+..... ..++++.++++..++. .........||+|||||++||||++++|+
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLA---------PLAHLPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCH---------HHHcCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999988765 5799999864321 2233455555555443 33333445799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhhhhcCEEEEEeC
Q 000553 1347 VLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1399 (1428)
Q Consensus 1347 ILlLDEaTS~lD~~te~~Iq~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1399 (1428)
+|||||||++||+.+.+.+.+.|++. .+++|+|++||+++.+.. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999875 358999999999999998 99988754
No 435
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=326.48 Aligned_cols=198 Identities=26% Similarity=0.378 Sum_probs=162.2
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------------
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------- 672 (1428)
+++|+++.|+.+ ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578889988531 2359999999999999999999999999999999999999999998764
Q ss_pred --cEEEEcCCCCCCc-ccHHHHHhcCCC------------CC---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCcc
Q 000553 673 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~L 734 (1428)
.++|++|++.++. .|++||+.++.. .+ .++..++++..++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998776 699999987531 11 122334444444432 234566799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEE
Q 000553 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 812 (1428)
Q Consensus 735 SGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 812 (1428)
||||||||+||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 332122 3789999999999988 59999999999999
Q ss_pred EecChHHHH
Q 000553 813 WIGSSADLA 821 (1428)
Q Consensus 813 ~~g~~~el~ 821 (1428)
+.|+++++.
T Consensus 225 ~~~~~~~~~ 233 (241)
T cd03256 225 FDGPPAELT 233 (241)
T ss_pred eecCHHHhh
Confidence 999988763
No 436
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.6e-34 Score=318.00 Aligned_cols=192 Identities=24% Similarity=0.332 Sum_probs=161.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
++++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~---~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 74 (208)
T cd03268 1 LKTNDLTKTYGK---K---RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRI 74 (208)
T ss_pred CEEEEEEEEECC---e---EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhE
Confidence 357899998852 2 359999999999999999999999999999999999999999999876 48
Q ss_pred EEEcCCCCCC-cccHHHHHhcCC---CCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000553 675 AYVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1428)
Q Consensus 675 ~y~~Q~p~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~ 750 (1428)
+||+|++.++ +.|++||+.++. ..++++.+++++..+++.... .....|||||||||+||||++.
T Consensus 75 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~ 143 (208)
T cd03268 75 GALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLG 143 (208)
T ss_pred EEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhc
Confidence 9999999877 469999997753 234556667777777754332 3456899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 751 ~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 144 NPDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999988875 33212257899999999999864 9999999999998754
No 437
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=327.48 Aligned_cols=206 Identities=25% Similarity=0.330 Sum_probs=170.4
Q ss_pred CCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC----
Q 000553 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1428)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~---- 672 (1428)
....++++|+++.|+. . .+|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~ 83 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENIL 83 (260)
T ss_pred CCceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcc
Confidence 3456899999999953 2 35999999999999999999999999999999999986 5899998754
Q ss_pred -----------cEEEEcCCCCCCcccHHHHHhcCCC----CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCc
Q 000553 673 -----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1428)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~ 733 (1428)
.++|++|+|.+++.|++||+.++.. .++ ++..++++..++..++. +..++...+
T Consensus 84 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 156 (260)
T PRK10744 84 TPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYS 156 (260)
T ss_pred ccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCC
Confidence 4899999999888999999987532 222 33445566666543332 234567789
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEE
Q 000553 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVK 812 (1428)
Q Consensus 734 LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 812 (1428)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|+++
T Consensus 157 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 157 LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999988776 333 334689999999999886 59999999999999
Q ss_pred EecChHHHHh
Q 000553 813 WIGSSADLAV 822 (1428)
Q Consensus 813 ~~g~~~el~~ 822 (1428)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999888753
No 438
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.3e-34 Score=323.31 Aligned_cols=199 Identities=25% Similarity=0.375 Sum_probs=164.5
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|++++|+. . .+|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA---R---RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 578899999852 2 359999999999999999999999999999999999999999998865 3
Q ss_pred EEEEcCCCCC-CcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWI-LSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l-~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|++.+ ++.|++||+.++.. .+++ +..+.++..++. ...+....+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 8999999987 46799999986532 2222 233344444443 223556679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHHh
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999988876 33212 24789999999999998899999999999999999888754
No 439
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-34 Score=287.80 Aligned_cols=209 Identities=27% Similarity=0.362 Sum_probs=176.3
Q ss_pred cEEEEEEEEEECCC--CCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChH---hH
Q 000553 1191 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1265 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1265 (1428)
.|+.++++..-+.. .-.+|++|+|.|++||.|||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888887776543 33689999999999999999999999999999999999999999999999999988754 45
Q ss_pred h-cceEEEeCCccccCC-cHHHhcC-cC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000553 1266 R-GRFAVVPQSPFLFEG-SLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1339 (1428)
Q Consensus 1266 R-~~i~~VpQdp~lf~g-TIR~NLd-p~---~~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1339 (1428)
| +++++|.|.-.|.+. |--||.. |. ++.+.+. +....+.++..||..++...+..|||||+||++|||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~------~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiAR 159 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADS------RAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALAR 159 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccH------HHHHHHHHHHhCcccccccCccccCchHHHHHHHHH
Confidence 5 579999999888765 8899974 32 2211111 112234555668888888888899999999999999
Q ss_pred HHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhhhcCEEEEEeCCeEEEe
Q 000553 1340 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVEQ 1405 (1428)
Q Consensus 1340 ALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ive~ 1405 (1428)
|+.-+|+||+-||||-|||.+|-+.|-+.+-+.- .+.|.++|||+......|||++-|.+|+++|.
T Consensus 160 Afa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 160 AFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9999999999999999999999999999886553 48899999999999999999999999999863
No 440
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.4e-34 Score=362.03 Aligned_cols=199 Identities=26% Similarity=0.339 Sum_probs=167.8
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC--CceEEECCeeCCCCChHhHhcceEEEeCCccccCC-c
Q 000553 1206 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1282 (1428)
Q Consensus 1206 ~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~--~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lf~g-T 1282 (1428)
+.+|+|+|++++|||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 899999999874 2456789999999999975 9
Q ss_pred HHHhcCcCC------CCChHHHHHHHHHccHHHHHHhCCC----chhhhc-CCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000553 1283 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKE-SGISFSVGQRQLICLARALLKSSKVLCLD 1351 (1428)
Q Consensus 1283 IR~NLdp~~------~~~d~ei~~aL~~~~l~~~i~~lgL----dt~v~e-~G~~LSgGQrQrl~LARALL~~~~ILlLD 1351 (1428)
||||+.+.. ..++++..+. ..+.++.+|| |+.+++ ....||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~-----v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV-----AESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH-----HHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996421 1233332221 2344555555 666664 35679999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-h-hhcCEEEEEeCCeEEEecChhHHhc
Q 000553 1352 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1352 EaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
|||++||..+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 9999999999999999998865 58999999999984 5 4589999999999999999999874
No 441
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=324.74 Aligned_cols=197 Identities=29% Similarity=0.360 Sum_probs=164.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------cEE
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 675 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------~i~ 675 (1428)
..++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999853 2359999999999999999999999999999999999999999998865 489
Q ss_pred EEcCCCCCCc-ccHHHHHhcCCCC-ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000553 676 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1428)
Q Consensus 676 y~~Q~p~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 753 (1428)
|++|+|.++. .|++||+.++... .+++..++++..++.... .....+||||||||++||||++.+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998876 6999999886321 234556666666665432 34556999999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 754 IYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 754 illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999988776 33211 23789999999999875 59999999999999877643
No 442
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=322.98 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.6
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+.... ..++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578999999864210 11459999999999999999999999999999999999999999998764
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++...+ .....+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKA-----------DAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hcChhhCCHHHHHH
Confidence 3899999999886 599999987532 222 2334455555554322 33456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~e 819 (1428)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000553 820 LA 821 (1428)
Q Consensus 820 l~ 821 (1428)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 443
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=329.95 Aligned_cols=206 Identities=24% Similarity=0.372 Sum_probs=171.1
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|++++|+...+...+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999743210113469999999999999999999999999999999999999999998864
Q ss_pred --cEEEEcCCCC--CCcccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|...... ...+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRH-----------APHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHH
Confidence 3899999985 666799999998632 22 2345667777777654433 345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el 820 (1428)
++||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 433112 37899999999999888999999999999999999988
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 64
No 444
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=330.69 Aligned_cols=203 Identities=28% Similarity=0.384 Sum_probs=169.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCC---eEEEEcC--------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~---G~i~~~~-------- 672 (1428)
..++++|+++.|+... ..+++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~~----~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDSK----KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCCC----ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 4689999999996321 235999999999999999999999999999999999999987 8998765
Q ss_pred -----cEEEEcCCCC--CCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -----~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.++|++|+|+ +++.|++|||.|+.. .++ ++..++++.++|+.... ....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-----------SEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHH
Confidence 4899999994 567899999988632 222 33556677777764433 3446999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecCh
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~ 817 (1428)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 333122 37899999999999988999999999999999999
Q ss_pred HHHHh
Q 000553 818 ADLAV 822 (1428)
Q Consensus 818 ~el~~ 822 (1428)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 445
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.1e-34 Score=315.95 Aligned_cols=192 Identities=20% Similarity=0.273 Sum_probs=159.8
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EeCCccccC-CcHHHhcCcCCC-CC--hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 000553 1272 VPQSPFLFE-GSLRDNLDPFHM-ND--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1347 (1428)
Q Consensus 1272 VpQdp~lf~-gTIR~NLdp~~~-~~--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~I 1347 (1428)
+||++.+|+ .|+++|+..... .. ++++.++++..++ +........+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGL---------TGFEDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCC---------HHHhcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998887 599999864321 11 2234455555544 4334444567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhhhhcCEEEE
Q 000553 1348 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1396 (1428)
Q Consensus 1348 LlLDEaTS~lD~~te~~Iq~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~V 1396 (1428)
|||||||++||..+.+.+.+.|++. .++.|+|+++|+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999985543 577654
No 446
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=338.69 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=173.3
Q ss_pred cEEEEEEEEEECCCC-CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcce
Q 000553 1191 LIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~-~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1269 (1428)
.++++|++++|+.+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+.
T Consensus 21 mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~------------ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA------------ 88 (549)
T ss_pred eeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee------------
Confidence 589999999997542 4699999999999999999999999999999999999999999999999762
Q ss_pred EEEeCCccccC-CcHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 000553 1270 AVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1345 (1428)
Q Consensus 1270 ~~VpQdp~lf~-gTIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~ 1345 (1428)
++++.+.+++ .|+++|+.... ..++++..+. ..+.++.+|++.........||||||||++|||||+.+|
T Consensus 89 -~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~-----i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P 162 (549)
T PRK13545 89 -LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEI-----IPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINP 162 (549)
T ss_pred -eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 2333444444 49999986432 2233332221 122333346665566667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1346 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1346 ~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..+-. .|.+++
T Consensus 163 ~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el~~~~~-~~~~~~ 241 (549)
T PRK13545 163 DILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEVVDHYD-EFLKKY 241 (549)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhhHH-HHHHHH
Confidence 9999999999999999999999998764 47899999999999976 89999999999999999999987533 455444
No 447
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.3e-34 Score=319.64 Aligned_cols=192 Identities=30% Similarity=0.426 Sum_probs=157.8
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i 74 (213)
T cd03301 1 VELENVTKRFGN---V---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDI 74 (213)
T ss_pred CEEEeeEEEECC---e---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceE
Confidence 357889998853 1 359999999999999999999999999999999999999999999865 38
Q ss_pred EEEcCCCCCCc-ccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHH
Q 000553 675 AYVPQVPWILS-GTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1428)
Q Consensus 675 ~y~~Q~p~l~~-~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1428)
+|++|++.++. .|++||+.++.. .+++ +..+.++..+++... .....+||||||||++|||
T Consensus 75 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~lar 143 (213)
T cd03301 75 AMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLL-----------DRKPKQLSGGQRQRVALGR 143 (213)
T ss_pred EEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHH-----------hCChhhCCHHHHHHHHHHH
Confidence 99999999885 599999987522 2222 334455555554332 3445689999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 747 aly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 144 AIVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999988876 332122 37899999999998765 9999999999998765
No 448
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.3e-34 Score=320.49 Aligned_cols=198 Identities=27% Similarity=0.426 Sum_probs=161.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+. . ++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 357889988853 2 359999999999999999999999999999999999999999998765
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCCCC--h---HHHHHHHHHh-cchHHHhcccCCCcccccCCCCccchHHHHHHHH
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKNYD--P---QSYSETLKAC-TLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~--~---~~~~~v~~~c-~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRval 744 (1428)
.++|++|++.++.. |++||+.++.... . ++..++++.. .+. .....+..+||||||||++|
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~-----------~~~~~~~~~LS~G~~qrv~l 143 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLK-----------ERRKQLAGTLSGGEQQMLAI 143 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhh-----------hhhhCchhhCCHHHHHHHHH
Confidence 38999999988876 9999998764321 1 1222333332 121 12345667899999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHH
Q 000553 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 745 ARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
|||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 144 aral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 144 ARALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999999988876 33312257899999999998755 9999999999999999887764
No 449
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.7e-34 Score=308.47 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.8
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|+++.|+... .++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 36789999986421 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCcccHHHHHhcCCCCChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000553 674 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1428)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~ 753 (1428)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhcCCEEEEEeCCeEEEec
Q 000553 754 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 754 illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 815 (1428)
++||||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999988876 433 34578999999999999999999999999998654
No 450
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4e-34 Score=333.81 Aligned_cols=202 Identities=26% Similarity=0.392 Sum_probs=166.4
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 46899999999853 2359999999999999999999999999999999999999999999865
Q ss_pred -cEEEEcCCCCCCc-ccHHHHHhc-CC--CCChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~-g~--~~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.+||++|++.++. .|++||+.+ +. ..+.+ +.+++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4999999998875 599999974 22 12222 23344555554322 23344689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHh
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988876 33212357899999999999864 99999999999999999999865
Q ss_pred c
Q 000553 823 S 823 (1428)
Q Consensus 823 ~ 823 (1428)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 451
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=331.26 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=167.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|..... ....+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4688999999963211 012469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.|+|++|+| .+++.|++|||.++.. .+. ++.+++++.++|+.+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 389999998 5777899999987531 222 2345556666664322 234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecCh
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 817 (1428)
|||++||||+..+|+++||||||++||+...+.+.+. +.....++.|+|++||+++.+. .||++++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888775 4331234789999999999876 5999999999999999998
Q ss_pred HHHHh
Q 000553 818 ADLAV 822 (1428)
Q Consensus 818 ~el~~ 822 (1428)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88753
No 452
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.8e-34 Score=318.94 Aligned_cols=188 Identities=32% Similarity=0.436 Sum_probs=154.9
Q ss_pred EEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC--------cEEEEcC
Q 000553 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 679 (1428)
Q Consensus 608 ~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~--------~i~y~~Q 679 (1428)
++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG---H---PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC---E---EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 5678888753 1 359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CcccHHHHHhcCCCC-----------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 680 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 680 ~p~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
+|.+ ++.|++||+.++... ++++.+++++.++++.... ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9976 557999999875321 1234566777777764433 23458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEe
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 814 (1428)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988876 33212257899999999999865 9999999886 5443
No 453
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-34 Score=317.24 Aligned_cols=190 Identities=27% Similarity=0.381 Sum_probs=158.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
++++|+++.|+.. ..|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~~--------~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGEQ--------PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCCE--------ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 3678899988521 2399999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCcc-cHHHHHhcCCCC-------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHH
Q 000553 675 AYVPQVPWILSG-TIRDNILFGKNY-------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1428)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1428)
+|++|+|.++.+ |++||+.++... ++++..++++.++++...... ..+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRL-----------PGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHHHHH
Confidence 999999998875 999999875321 233556677777776544433 3489999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 747 aly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988876 33211 237899999999999865 9999999999998654
No 454
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.1e-34 Score=319.77 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|+++.|+... ...++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57899999996421 112469999999999999999999999999999999999999999998875 4
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|+|.++.. |++||+.+... .+ .++..+.++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998875 99999976421 12 2344555666655432 2345668999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999888876 33212347899999999998764 9999999999998654
No 455
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=325.87 Aligned_cols=203 Identities=26% Similarity=0.321 Sum_probs=167.7
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcC---ccC--CCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~---~~~--~~G~i~~~~------- 672 (1428)
.++++|+++.|+. ..+|+|+||++++||+++|+|+||||||||+++|+|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999853 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCC----CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|+|.+++.|++||+.++.. .+ +++.+++++.+++..++. +.....+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 3899999999998899999987532 11 234455666666643332 233566779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988876 433 345789999999999885 59999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998854
No 456
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4e-34 Score=341.16 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=168.1
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|++++|+. ..+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4789999999863 2359999999999999999999999999999999999999999999876
Q ss_pred -cEEEEcCCCCC-CcccHHHHHhcCCC-----C------ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHH
Q 000553 673 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1428)
Q Consensus 673 -~i~y~~Q~p~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQk 739 (1428)
++|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.... .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 49999999987 56799999988741 1 123455666666665322 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 740 qRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
||++|||||+++|+++||||||++||+.....+++. +......++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998888775 3321224789999999999985 59999999999999999999
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 457
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=324.49 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=163.2
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------c
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-------------~ 673 (1428)
+++|+++.|+.. ..+|+|+||++++|++++|+||||||||||+++|.|..+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578899988631 2359999999999999999999999999999999999999999998865 4
Q ss_pred EEEEcCCCCCCc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999998886 599999987532 221 23344455554432 0123456679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHHH
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332122 3789999999999865 59999999999999999988774
No 458
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=326.43 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=169.9
Q ss_pred CCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC----
Q 000553 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 672 (1428)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~---- 672 (1428)
.+..++++|+++.|+. . .+|+|+||+|++|++++|+|+||||||||+++|+|.++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~ 89 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIY 89 (267)
T ss_pred CCceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECc
Confidence 3457999999999963 2 359999999999999999999999999999999999974 899998765
Q ss_pred -----------cEEEEcCCCCCCcccHHHHHhcCCC---C--C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 673 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
.++|++|+|.+++.|++||+.++.. . + .++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 162 (267)
T PRK14235 90 DPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGT 162 (267)
T ss_pred ccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 3899999999998899999987531 1 1 223455666666644332 22355677
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 811 (1428)
+||||||||++||||++.+|+++||||||++||+...+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i 240 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999988776 433 3346899999999999854 999999999999
Q ss_pred EEecChHHHH
Q 000553 812 KWIGSSADLA 821 (1428)
Q Consensus 812 ~~~g~~~el~ 821 (1428)
++.|+.+++.
T Consensus 241 ~~~g~~~~~~ 250 (267)
T PRK14235 241 VEVGDTEKMF 250 (267)
T ss_pred EEeCCHHHHH
Confidence 9999988875
No 459
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-34 Score=326.25 Aligned_cols=207 Identities=26% Similarity=0.331 Sum_probs=172.2
Q ss_pred CCCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC---
Q 000553 601 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG--- 672 (1428)
Q Consensus 601 ~~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~--- 672 (1428)
.....++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|.|+++ |++|+|.++|
T Consensus 16 ~~~~~l~~~nl~~~~~~---~---~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~ 89 (267)
T PRK14237 16 EEEIALSTKDLHVYYGK---K---EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDI 89 (267)
T ss_pred CCCeEEEEeeEEEEECC---e---eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEc
Confidence 34457999999999952 2 35999999999999999999999999999999999986 5899998764
Q ss_pred ------------cEEEEcCCCCCCcccHHHHHhcCCC----CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCC
Q 000553 673 ------------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1428)
Q Consensus 673 ------------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~ 732 (1428)
.|+|++|++.++..|++|||.++.. .+ +++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~ 162 (267)
T PRK14237 90 NRKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSAL 162 (267)
T ss_pred ccccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcc
Confidence 3899999999998999999987532 12 233455666776654432 23456778
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeE
Q 000553 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQV 811 (1428)
Q Consensus 733 ~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 811 (1428)
+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.++.|+|++||+++.+. .||++++|++|++
T Consensus 163 ~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i 240 (267)
T PRK14237 163 TLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999888876 333 345689999999999875 5999999999999
Q ss_pred EEecChHHHHh
Q 000553 812 KWIGSSADLAV 822 (1428)
Q Consensus 812 ~~~g~~~el~~ 822 (1428)
++.|+.+++..
T Consensus 241 ~~~g~~~~~~~ 251 (267)
T PRK14237 241 IEYDKTRNIFT 251 (267)
T ss_pred EEeCCHHHHhc
Confidence 99999988753
No 460
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-34 Score=325.97 Aligned_cols=206 Identities=25% Similarity=0.351 Sum_probs=168.4
Q ss_pred CCceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC----
Q 000553 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1428)
Q Consensus 602 ~~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~---- 672 (1428)
.+..++++|+++.|+. ..+|+|+||+|++|++++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~ 83 (269)
T PRK14259 10 KNIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLY 83 (269)
T ss_pred CCceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 3457899999999863 135999999999999999999999999999999999987 5899998764
Q ss_pred -----------cEEEEcCCCCCCcccHHHHHhcCCCC---C---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 -----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+. +.......+||
T Consensus 84 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 156 (269)
T PRK14259 84 DPRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLS 156 (269)
T ss_pred cccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCC
Confidence 38999999999888999999986432 1 223344555555432221 23455677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeC------
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK------ 808 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~------ 808 (1428)
||||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+. .||++++|++
T Consensus 157 ~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~ 234 (269)
T PRK14259 157 GGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGG 234 (269)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccc
Confidence 9999999999999999999999999999999999988876 333 344689999999999876 5999999996
Q ss_pred -----CeEEEecChHHHHh
Q 000553 809 -----GQVKWIGSSADLAV 822 (1428)
Q Consensus 809 -----G~i~~~g~~~el~~ 822 (1428)
|++++.|+.+++..
T Consensus 235 ~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 235 SGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred cccccceEEEeCCHHHHHh
Confidence 67899999888754
No 461
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.1e-34 Score=321.94 Aligned_cols=198 Identities=26% Similarity=0.372 Sum_probs=162.3
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 1 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 74 (232)
T cd03218 1 LRAENLSKRYGK---R---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRAR 74 (232)
T ss_pred CeEEEEEEEeCC---E---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHh
Confidence 357889998853 2 359999999999999999999999999999999999999999998764
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHH
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRva 743 (1428)
.++|++|++.++.+ |++||+.++.+ .++ ++.++.++..++.. .......+||||||||++
T Consensus 75 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~ 143 (232)
T cd03218 75 LGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVE 143 (232)
T ss_pred ccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHH
Confidence 38999999988876 99999987532 121 22334444444432 234556799999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHH
Q 000553 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 744 lARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
||||+..+|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 144 la~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 144 IARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 99999999999999999999999999988875 33212347899999999987654 9999999999999999888764
No 462
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=329.04 Aligned_cols=201 Identities=23% Similarity=0.360 Sum_probs=168.7
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.+ ..+|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58999999999521 2359999999999999999999999999999999999999999998875
Q ss_pred ---cEEEEcCCC--CCCcccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHH
Q 000553 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1428)
Q Consensus 673 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 740 (1428)
.++|++|+| .+++.|++||+.++.. +. .++..++++.++|... ....+.+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778899999987532 22 2345566666666532 23456799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChH
Q 000553 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1428)
Q Consensus 741 RvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 818 (1428)
|++|||||+.+|+++||||||++||+...+.+.+. +..... .++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999988775 332122 2789999999999987 59999999999999999999
Q ss_pred HHHh
Q 000553 819 DLAV 822 (1428)
Q Consensus 819 el~~ 822 (1428)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 463
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-34 Score=317.10 Aligned_cols=190 Identities=24% Similarity=0.349 Sum_probs=158.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------c
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~ 673 (1428)
++++|+++.|+. . .+++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 367899998853 1 3599999999999 9999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998876 99999986421 12 234456666666654332 23458999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEec
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 815 (1428)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988876 333 334589999999999986 59999999999998754
No 464
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.8e-34 Score=360.47 Aligned_cols=215 Identities=28% Similarity=0.448 Sum_probs=175.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCceEEEC----------------
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVD---------------- 1253 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~--~~~~G~I~ID---------------- 1253 (1428)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 578999999963 46999999999999999999999999999999999996 7999999997
Q ss_pred -------CeeCC-------CCC---hHhHhcceEEEeCC-ccccCC-cHHHhcCcCC---CCChHHHHHHHHHccHHHHH
Q 000553 1254 -------GLNII-------NTP---VRDLRGRFAVVPQS-PFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEV 1311 (1428)
Q Consensus 1254 -------G~di~-------~i~---~~~lR~~i~~VpQd-p~lf~g-TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i 1311 (1428)
|.++. ..+ ...+|++++++||+ +.+|+. |+++|+.+.. ..+.++.. ....+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l 153 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDLI 153 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHH
Confidence 33331 111 23467889999998 567764 9999985321 12222211 1233445
Q ss_pred HhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhhh
Q 000553 1312 EAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1389 (1428)
Q Consensus 1312 ~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~--~~~TvI~IaHrl~ti~ 1389 (1428)
+.+|++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 154 ~~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 154 EMVQLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred HHcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 55577666666677899999999999999999999999999999999999999999998864 3789999999999997
Q ss_pred h-cCEEEEEeCCeEEEecChhHHhc
Q 000553 1390 N-MDEILILDHGHLVEQGNPQTLLQ 1413 (1428)
Q Consensus 1390 ~-~DrI~Vl~~G~ive~g~p~eLl~ 1413 (1428)
. ||+|++|++|++++.|+++++..
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHH
Confidence 6 89999999999999999998865
No 465
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.3e-34 Score=319.35 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=157.4
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57899999986421 112469999999999999999999999999999999999999999998764
Q ss_pred ----cEEEEcCCCCCCc-ccHHHHHhcCC---CCC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHH
Q 000553 673 ----SIAYVPQVPWILS-GTIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1428)
Q Consensus 673 ----~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkq 740 (1428)
.++|++|+|.++. .|++||+.++. .++ +++..+.++.++++... .....+|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-----------NHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHH
Confidence 3899999998885 59999998742 122 22344555555554332 3345689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEeCCeEE
Q 000553 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1428)
Q Consensus 741 RvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 812 (1428)
|++||||++.+|+++||||||++||+++.+.+.+. +.... ..++|+|++||+++.+..+|+|++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988876 33211 2378999999999999889999999999875
No 466
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=326.31 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=167.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+.. + .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468999999999632 1 2359999999999999999999999999999999999999999998865
Q ss_pred --cEEEEcCCCC--CCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++||+|+|. +++.|++|||.++.. ++.+ +..++++..++...+ .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHH
Confidence 3899999984 557799999987532 3333 234556666665433 33456999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el 820 (1428)
++||||++.+|+++||||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 3321223 4899999999999888999999999999999998876
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 53
No 467
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-34 Score=330.55 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=164.8
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 45899999999964311 112369999999999999999999999999999999999999999998654
Q ss_pred -------cEEEEcCCCC--CCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 -------~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.|+|++|+|+ +++.|++|||.|+.. .+.+ +..+.++..+|..+ ..+....+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3899999984 667899999988632 2221 22233343333211 12456679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEe
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 814 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 814 (1428)
|||||++||||++.+|+++||||||++||+.+.+.+++. +..... .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999988775 332112 3789999999999875 5999999999999999
Q ss_pred cChHHHHh
Q 000553 815 GSSADLAV 822 (1428)
Q Consensus 815 g~~~el~~ 822 (1428)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 468
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=326.50 Aligned_cols=205 Identities=25% Similarity=0.308 Sum_probs=166.5
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC-----
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~----- 672 (1428)
+..++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE---K---RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC---c---eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999963 2 35999999999999999999999999999999999864 6899997754
Q ss_pred ----------cEEEEcCCCCCCcccHHHHHhcCCCCC--------hHHHHHHHHHhcchHHHhcccCCCcccccCCCCcc
Q 000553 673 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1428)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~L 734 (1428)
.++|++|+|.++++|++||+.++..+. +++..++++.+++..++. ...+..+.+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999899999998753211 122333444444432221 2345667899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEE
Q 000553 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKW 813 (1428)
Q Consensus 735 SGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~ 813 (1428)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988775 333 334689999999999876 599999999999999
Q ss_pred ecChHHHHh
Q 000553 814 IGSSADLAV 822 (1428)
Q Consensus 814 ~g~~~el~~ 822 (1428)
.|+.+++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 469
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-34 Score=324.24 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=166.9
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc--C---CCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~--~---~~G~i~~~~------ 672 (1428)
..++++|+++.|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ---H---HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC---e---eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 46899999999853 2 35999999999999999999999999999999999987 3 589998754
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCCC----ChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|+|.+++.|++||+.++... +++ +..++++..++.+.+. +.....+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999876321 222 2333445555543221 22355677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 814 (1428)
||||||++||||++.+|+++||||||++||+++.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998888775 433 344689999999999876 5999999999999999
Q ss_pred cChHHHHh
Q 000553 815 GSSADLAV 822 (1428)
Q Consensus 815 g~~~el~~ 822 (1428)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99998754
No 470
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.1e-34 Score=318.64 Aligned_cols=197 Identities=25% Similarity=0.290 Sum_probs=157.6
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
+.++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 678888888864 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EeCCccccCCcHHHhcCcCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~lf~gTIR~NLdp~~~---~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+..+.|+++|+..... .+.++..+ ...+.++.+|++.........||+|||||++||||++++|++|
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 164 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDE-----KIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDIL 164 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 2234699999864321 12222111 1223333346655555566689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEec
Q 000553 1349 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQG 1406 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g 1406 (1428)
||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 165 llDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 165 LIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998764 46899999999999876 8999999999998865
No 471
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.9e-34 Score=319.55 Aligned_cols=193 Identities=25% Similarity=0.391 Sum_probs=159.3
Q ss_pred EEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEEEeCCccc---cCCcHHHhcCcC
Q 000553 1214 FTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL---FEGSLRDNLDPF 1290 (1428)
Q Consensus 1214 ~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l---f~gTIR~NLdp~ 1290 (1428)
|+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998864 357789999999976 457999998543
Q ss_pred CC--------CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCCH
Q 000553 1291 HM--------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDA 1359 (1428)
Q Consensus 1291 ~~--------~~---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD~ 1359 (1428)
.. .. ++++.++++. +|++.........||+|||||++|||||+++|++|||||||++||+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~ 146 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRR---------VGLTELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDM 146 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHH---------hCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 10 11 1223333333 3555444555567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecChhHHhccCCcHHHHHH
Q 000553 1360 QTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGNPQTLLQDECSVFSSFV 1423 (1428)
Q Consensus 1360 ~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~p~eLl~~~~s~f~~l~ 1423 (1428)
.+.+.+.+.|++.. ++.|+|+++|+++.+.. ||+|+++ +|++++.|+++++.++. ...+++
T Consensus 147 ~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~~--~~~~~~ 209 (223)
T TIGR03771 147 PTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDPA--PWMTTF 209 (223)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcChH--HHHHHh
Confidence 99999999998764 47899999999998876 8999999 79999999999997642 344443
No 472
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.2e-34 Score=325.55 Aligned_cols=201 Identities=24% Similarity=0.344 Sum_probs=165.3
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN---R---CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999852 2 359999999999999999999999999999999999999999998764
Q ss_pred -----cEEEEcCCCCCCcc-cHHHHHhcCC----CCChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.++|++|++.+++. |++||+.++. ..+.+ +..+.++..++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999998876 9999998642 12222 23344555555422 223456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecC
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 816 (1428)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999988775 332112 37899999999998865 99999999999999999
Q ss_pred hHHHHh
Q 000553 817 SADLAV 822 (1428)
Q Consensus 817 ~~el~~ 822 (1428)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 473
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=324.99 Aligned_cols=204 Identities=25% Similarity=0.345 Sum_probs=167.2
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------ 672 (1428)
..++++|+++.|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~ 84 (258)
T PRK14268 11 PQIKVENLNLWYGE---K---QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEP 84 (258)
T ss_pred eeEEEeeeEEEeCC---e---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccc
Confidence 46899999998852 2 359999999999999999999999999999999999875 799998754
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|++.+++.|++||+.++.. .+.+ +..++++.+++..++. ........+|||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 157 (258)
T PRK14268 85 DVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSG 157 (258)
T ss_pred cchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCH
Confidence 3899999999988999999987531 2222 2344555555532221 223456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 158 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 235 (258)
T PRK14268 158 GQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFG 235 (258)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988775 333 3347899999999998864 9999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+++++..
T Consensus 236 ~~~~~~~ 242 (258)
T PRK14268 236 QTRQIFH 242 (258)
T ss_pred CHHHHhc
Confidence 9988753
No 474
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.5e-34 Score=335.26 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=167.8
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
...++++|++..|+. ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 356999999999963 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCCCC-cccHHHHHhc-CCC--CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 --~i~y~~Q~p~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.||||+|++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999886 4599999975 321 121 223344444444321 2334458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
+||||+.++|+++||||||++||+.+.+.+.+. +......|+|+|++||+++.+.. ||+|++|++|+++..|+.+++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999988886 33312357899999999999865 9999999999999999999986
Q ss_pred hc
Q 000553 822 VS 823 (1428)
Q Consensus 822 ~~ 823 (1428)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 475
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.5e-34 Score=336.27 Aligned_cols=210 Identities=27% Similarity=0.382 Sum_probs=176.1
Q ss_pred cEEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCCh-HhHhcce
Q 000553 1191 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1269 (1428)
Q Consensus 1191 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1269 (1428)
.++++|++++|++- ++|+||||+++|||..|++|.||||||||++.|.|.|+|++|+|.+||....-.++ +..+..|
T Consensus 8 ll~~~~i~K~FggV--~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGGV--KALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCCc--eeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 58999999999754 69999999999999999999999999999999999999999999999999985554 5556679
Q ss_pred EEEeCCccccCC-cHHHhcCcCCCCC-------hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHH
Q 000553 1270 AVVPQSPFLFEG-SLRDNLDPFHMND-------DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1341 (1428)
Q Consensus 1270 ~~VpQdp~lf~g-TIR~NLdp~~~~~-------d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1341 (1428)
++|.||+.|++. ||.|||-.+.+.. ..++.+. ..+.++.+|++......-.+||.||||.+.||||+
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~-----A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl 160 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRR-----ARELLARLGLDIDPDTLVGDLSIAQRQMVEIARAL 160 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHH-----HHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHH
Confidence 999999999987 9999996554322 2222221 22344445443223333347999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh-cCEEEEEeCCeEEEecC
Q 000553 1342 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVEQGN 1407 (1428)
Q Consensus 1342 L~~~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ive~g~ 1407 (1428)
..+++|||||||||+|+....+.+.+.|++.. +|.++|+|||||+.+.. ||||.||.||+++..+.
T Consensus 161 ~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 161 SFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999988888888998875 69999999999999987 89999999999998776
No 476
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=324.65 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=166.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~------- 672 (1428)
.++++|+++.|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN---Y---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999853 2 35999999999999999999999999999999999986 4799998764
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCCC----Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|++.+++.|++||+.++... ++ ++..++++.+++..+.. ...+..+.+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 38999999999989999999875321 11 23445555555532111 123456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++.+.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988776 433 3446899999999999765 9999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14251 229 PTEEMFI 235 (251)
T ss_pred CHHHHHh
Confidence 9888753
No 477
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.3e-34 Score=312.40 Aligned_cols=177 Identities=27% Similarity=0.383 Sum_probs=145.9
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCC--CChHhHhcceEEEeCCc--cccCC
Q 000553 1206 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRFAVVPQSP--FLFEG 1281 (1428)
Q Consensus 1206 ~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i~~VpQdp--~lf~g 1281 (1428)
..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++++++||+| .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 469999999999999999999999999999999999999999999999999852 23456788999999998 57888
Q ss_pred cHHHhcCcCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccccCCC
Q 000553 1282 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1358 (1428)
Q Consensus 1282 TIR~NLdp~~---~~~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~ILlLDEaTS~lD 1358 (1428)
|+++|+.... ..++++..+ ...+.++.+|++.........||+|||||++|||||+++|++|||||||++||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 159 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVER-----RVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDEPTAGLD 159 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9999996421 122222211 12233344456555556667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEeccChhh
Q 000553 1359 AQTASILQNAISSEC-KGMTVITIAHRIST 1387 (1428)
Q Consensus 1359 ~~te~~Iq~~i~~~~-~~~TvI~IaHrl~t 1387 (1428)
+.+.+.+.+.|++.. +++|||+|||+++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 160 PAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999998764 47899999999875
No 478
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-34 Score=329.23 Aligned_cols=206 Identities=25% Similarity=0.386 Sum_probs=166.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3688999999964211 112469999999999999999999999999999999999999999998865
Q ss_pred -----cEEEEcCCC--CCCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.|+|++|+| .+++.|++|||.++.. .+.+ +.+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 389999998 5778899999987532 2222 23344444455321 1244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEecCh
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 817 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 817 (1428)
|||++||||++.+|+++||||||++||+...+.+.+. +......++|+|++||+++.+. .||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 3321234789999999999886 4999999999999999998
Q ss_pred HHHHh
Q 000553 818 ADLAV 822 (1428)
Q Consensus 818 ~el~~ 822 (1428)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 479
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.3e-34 Score=318.42 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.4
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|.. ..+++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999998875
Q ss_pred --cEEEEcCCCCCCcccHHHHHhcCCC-----CChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHH
Q 000553 673 --SIAYVPQVPWILSGTIRDNILFGKN-----YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~~ti~~nI~~g~~-----~~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalA 745 (1428)
.++|++|+|.+++.|++||+.++.. .++++..+.++.+++.. +.....+.+|||||||||+||
T Consensus 80 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~la 149 (225)
T PRK10247 80 RQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLI 149 (225)
T ss_pred HhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHH
Confidence 4899999999998999999986421 12233445555555532 223556779999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhcCCEEEEEe-CCeEEEecChH
Q 000553 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 818 (1428)
Q Consensus 746 Raly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~-~G~i~~~g~~~ 818 (1428)
||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 150 RNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999998887775 33211 23789999999999998999999995 56666777664
No 480
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.9e-34 Score=338.59 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=158.3
Q ss_pred cceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC---------------------cEEEEcCCCCC
Q 000553 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 683 (1428)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------------------~i~y~~Q~p~l 683 (1428)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| +++|++|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999998875 39999999999
Q ss_pred Cc-ccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEE
Q 000553 684 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 755 (1428)
Q Consensus 684 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~il 755 (1428)
++ .|++|||.++.. .++ ++..++++..+|+... .....+|||||||||+|||||+.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 87 699999998742 222 3445566666665433 2344589999999999999999999999
Q ss_pred EEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh-hcCCEEEEEeCCeEEEecChHHHHhc
Q 000553 756 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 756 lLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999888864322112378999999999986 45999999999999999999998643
No 481
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=9.5e-34 Score=318.07 Aligned_cols=197 Identities=25% Similarity=0.294 Sum_probs=161.5
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+.... ...+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 35889999999964211 01359999999999999999999999999999999999999999998764
Q ss_pred ------cEEEEcCCCCCCcc-cHHHHHhcCC---CCC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHH
Q 000553 673 ------SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1428)
Q Consensus 673 ------~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQ 738 (1428)
.++|++|+|.++.. |++||+.++. ..+ +++..+.++.+++...+.. ...+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Ge 151 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDH-----------LPAQLSGGE 151 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHH
Confidence 38999999988775 9999998642 112 2345666777777544432 345899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEe
Q 000553 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 814 (1428)
Q Consensus 739 kqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~ 814 (1428)
|||++||||++.+|+++||||||++||+...+.+.+. +..... .++|+|++||+.+.+..||++++|++|+++++
T Consensus 152 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 152 QQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999988876 332112 37899999999999888999999999998753
No 482
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-34 Score=326.84 Aligned_cols=204 Identities=26% Similarity=0.347 Sum_probs=169.0
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|+++.|+.... ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2359999999999999999999999999999999999999999998875
Q ss_pred -cEEEEcCCCC--CCcccHHHHHhcCCC---CCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.++|++|+|. +++.|+.|||.++.. ... ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987532 222 2345566666664322 234568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el~ 821 (1428)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988875 332122 378999999999999889999999999999999998876
Q ss_pred hc
Q 000553 822 VS 823 (1428)
Q Consensus 822 ~~ 823 (1428)
..
T Consensus 229 ~~ 230 (277)
T PRK13642 229 AT 230 (277)
T ss_pred cC
Confidence 43
No 483
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.30 Aligned_cols=203 Identities=23% Similarity=0.348 Sum_probs=166.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCC-----CeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~-----~G~i~~~~------- 672 (1428)
.++++|+++.|+. . .+|+|+||+|++|++++|+||||||||||+++|+|+++|. +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK---H---QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC---e---eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999863 2 2599999999999999999999999999999999999987 69987653
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCCC----Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|+|.+++.|++||+.++..+ .+ ++..++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999988999999886421 11 22233333444432221 234567889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
||||||+||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3357899999999999876 8999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888753
No 484
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=322.85 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=168.9
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------- 672 (1428)
-++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE---K---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC---e---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4789999999853 2 259999999999999999999999999999999999875 799998764
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCCC----Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|++.+++.|++||+.|+... +. ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999876321 21 234566677766443321 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3346899999999998765 9999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888753
No 485
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-34 Score=315.49 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.6
Q ss_pred EEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC---------cEEEE
Q 000553 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 677 (1428)
Q Consensus 607 ~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------~i~y~ 677 (1428)
+++|+++.|+. . .+++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~---~---~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR---V---TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC---E---EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888852 2 359999999999999999999999999999999999999999999876 49999
Q ss_pred cCCCCCCcc-cHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000553 678 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1428)
Q Consensus 678 ~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1428)
+|++.++.+ |++||+.++.. .+ +++..+.++..+++... .....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHh
Confidence 999988865 99999986421 11 23344555555554332 3455689999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 750 ~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
.+|+++||||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33212347899999999998865 9999999999998654
No 486
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.4e-34 Score=320.56 Aligned_cols=199 Identities=26% Similarity=0.355 Sum_probs=164.0
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP---T---QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 578899998852 2 359999999999999999999999999999999999999999998765
Q ss_pred --cEEEEcCCCCCCc-ccHHHHHhcCC----CCCh----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|++.++. .|++||+.++. ..+. ++..++++..+++.. .......||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHH
Confidence 3899999998875 59999998753 1222 233445555444322 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el 820 (1428)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999988875 33212347899999999999865 999999999999999998887
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 53
No 487
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-34 Score=322.91 Aligned_cols=203 Identities=28% Similarity=0.356 Sum_probs=165.8
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCc--cC---CCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~--~~---~~G~i~~~~------- 672 (1428)
.++++|+++.|+. . .+|+|+||++++||+++|+||||||||||+++|.|.. .| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~---~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK---K---KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 5789999999963 2 3599999999999999999999999999999999985 36 589998764
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCC---C-Ch----HHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 11 22333455555533222 234566779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-cCCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988876 433 334689999999999875 59999999999999999
Q ss_pred ChHHHHh
Q 000553 816 SSADLAV 822 (1428)
Q Consensus 816 ~~~el~~ 822 (1428)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 488
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.8e-34 Score=311.08 Aligned_cols=188 Identities=20% Similarity=0.291 Sum_probs=157.2
Q ss_pred EEEEEEEEEECCCCCccceeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCceEEECCeeCCCCChHhHhcceEE
Q 000553 1192 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1271 (1428)
Q Consensus 1192 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1271 (1428)
++++|++++|++ +.++ ++||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ++.+++
T Consensus 2 l~~~~l~~~~~~--~~l~-~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~----~~~~~~ 74 (195)
T PRK13541 2 LSLHQLQFNIEQ--KNLF-DLSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA----KPYCTY 74 (195)
T ss_pred eEEEEeeEEECC--cEEE-EEEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh----hhhEEe
Confidence 789999999963 3344 599999999999999999999999999999999999999999999986543 456999
Q ss_pred EeCCccc-cCCcHHHhcCcCCCC--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 000553 1272 VPQSPFL-FEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1348 (1428)
Q Consensus 1272 VpQdp~l-f~gTIR~NLdp~~~~--~d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL~~~~IL 1348 (1428)
+||++.+ |..|+++|+...... .++++.++++.+ |++......+.+||+|||||++||||++++|+++
T Consensus 75 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~~rl~la~al~~~p~~l 145 (195)
T PRK13541 75 IGHNLGLKLEMTVFENLKFWSEIYNSAETLYAAIHYF---------KLHDLLDEKCYSLSSGMQKIVAIARLIACQSDLW 145 (195)
T ss_pred ccCCcCCCccCCHHHHHHHHHHhcccHHHHHHHHHHc---------CCHhhhccChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999754 678999999653211 233444444544 4444455566789999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhhhhcCEEE
Q 000553 1349 CLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEIL 1395 (1428)
Q Consensus 1349 lLDEaTS~lD~~te~~Iq~~i~~~-~~~~TvI~IaHrl~ti~~~DrI~ 1395 (1428)
+|||||++||+.+.+.+.+.|++. .+++|+|+|||+++.+.++|-|.
T Consensus 146 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~ 193 (195)
T PRK13541 146 LLDEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKSAQILQ 193 (195)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccchhheec
Confidence 999999999999999999999753 36899999999999999998763
No 489
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=323.79 Aligned_cols=201 Identities=26% Similarity=0.348 Sum_probs=166.8
Q ss_pred CceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC----------
Q 000553 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1428)
Q Consensus 603 ~~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~---------- 672 (1428)
+..++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~ 82 (265)
T PRK10575 9 DTTFALRNVSFRVPG---R---TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKA 82 (265)
T ss_pred CceEEEeeEEEEECC---E---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHH
Confidence 456899999999853 2 359999999999999999999999999999999999999999999876
Q ss_pred ---cEEEEcCCCCCCcc-cHHHHHhcCCC--------C---ChHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 ---SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|++-++.+ |+.||+.++.. . +.++..++++.++++..+. ....+||||
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 151 (265)
T PRK10575 83 FARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSGG 151 (265)
T ss_pred HhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCHH
Confidence 38999999876554 99999987531 1 1234556667777654333 233489999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEec
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 815 (1428)
||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~ 230 (265)
T PRK10575 152 ERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQG 230 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEec
Confidence 99999999999999999999999999999999888775 332112 3789999999999986 59999999999999999
Q ss_pred ChHHHH
Q 000553 816 SSADLA 821 (1428)
Q Consensus 816 ~~~el~ 821 (1428)
+.+++.
T Consensus 231 ~~~~~~ 236 (265)
T PRK10575 231 TPAELM 236 (265)
T ss_pred CHHHhc
Confidence 988764
No 490
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=325.42 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.6
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------ 672 (1428)
.++++|++++|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999999532 1359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCC--CCcccHHHHHhcCC---CCChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHH
Q 000553 673 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1428)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRv 742 (1428)
.++||+|+|. +++.||+||+.++. .++++ ++++.++.+++...+. .....||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23432 3456666666654433 33458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-cCCEEEEEeCCeEEEecChHHH
Q 000553 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 743 alARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~el 820 (1428)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999988775 332122 3789999999999985 6999999999999999999988
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 64
No 491
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=324.80 Aligned_cols=203 Identities=25% Similarity=0.381 Sum_probs=166.9
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
..++++|+++.|+... ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSDA----SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCCC----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 4589999999996421 2359999999999999999999999999999999999999999999876
Q ss_pred --cEEEEcCCCC--CCcccHHHHHhcCCC---CChH----HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|+ +++.|+++|+.++.. .+.+ +.+++++..++.... .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHH
Confidence 3899999996 456699999988632 2222 233445555544322 33556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhcCCEEEEEeCCeEEEecChHHH
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~el 820 (1428)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 333122 37899999999999888999999999999999999887
Q ss_pred Hh
Q 000553 821 AV 822 (1428)
Q Consensus 821 ~~ 822 (1428)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
No 492
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-33 Score=320.32 Aligned_cols=197 Identities=21% Similarity=0.312 Sum_probs=164.2
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG---F---KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC---e---EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999999853 1 359999999999999999999999999999999999999999998865
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCCCC---------------hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccc
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LS 735 (1428)
.++|++|++.++++ |++||+.++...+ +++.++.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999998876 9999998753211 12233344443333 22345667899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEe
Q 000553 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1428)
Q Consensus 736 GGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 814 (1428)
||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988876 332 3346899999999999875 999999999999999
Q ss_pred cChHHHH
Q 000553 815 GSSADLA 821 (1428)
Q Consensus 815 g~~~el~ 821 (1428)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988874
No 493
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=323.09 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=166.1
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~----------- 672 (1428)
+.++++|+++.|+. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 45899999999863 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------cEEEEcCCCCCCcc-cHHHHHhcCC----CCCh----HHHHHHHHHhcchHHHhcccCCCccccc
Q 000553 673 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 728 (1428)
Q Consensus 673 ---------------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~c~l~~di~~l~~gd~t~ig 728 (1428)
.++|++|+|.++.. |++||+.++. ..++ ++..+.++..++...+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999998875 9999998642 1221 2333444444443221 13
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEe
Q 000553 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 807 (1428)
Q Consensus 729 ~~g~~LSGGQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~ 807 (1428)
....+||||||||++||||++++|+++||||||++||+.+.+.+.+. +......++|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45678999999999999999999999999999999999999988875 33312347899999999999885 99999999
Q ss_pred CCeEEEecChHHHHh
Q 000553 808 KGQVKWIGSSADLAV 822 (1428)
Q Consensus 808 ~G~i~~~g~~~el~~ 822 (1428)
+|++++.|+++++..
T Consensus 227 ~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 227 QGKIEEEGAPEQLFG 241 (257)
T ss_pred CCEEEEeCCHHHhhh
Confidence 999999999888753
No 494
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.9e-34 Score=332.29 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=158.8
Q ss_pred cceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC------------cEEEEcCCCCCCcc-cHHHH
Q 000553 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SIAYVPQVPWILSG-TIRDN 691 (1428)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------~i~y~~Q~p~l~~~-ti~~n 691 (1428)
.+|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++| .+||++|++.++.. |++||
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 86 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGREN 86 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHH
Confidence 359999999999999999999999999999999999999999999876 48999999988875 99999
Q ss_pred HhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccc
Q 000553 692 ILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAV 764 (1428)
Q Consensus 692 I~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly~~~~illLDep~s~L 764 (1428)
+.+... .+ .++.+++++.++|.... ..+..+||||||||++||||++++|+++||||||++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 87 LEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 986421 11 23456667777765433 2345689999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHhc
Q 000553 765 DAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 765 D~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
|+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 D~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999988876 33312347899999999999875 999999999999999999998654
No 495
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=315.89 Aligned_cols=197 Identities=27% Similarity=0.411 Sum_probs=164.7
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-----------cE
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~-----------~i 674 (1428)
++++|++++|+. . ..|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 l~~~~l~~~~~~-----~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 73 (232)
T PRK10771 2 LKLTDITWLYHH-----L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPV 73 (232)
T ss_pred eEEEEEEEEECC-----c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccE
Confidence 578999999852 1 2389999999999999999999999999999999999999999875 38
Q ss_pred EEEcCCCCCCcc-cHHHHHhcCCC--C--C---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHH
Q 000553 675 AYVPQVPWILSG-TIRDNILFGKN--Y--D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1428)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~--~--~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalAR 746 (1428)
+|++|+|.++.+ |++|||.++.. . . +++..++++..+++..+... ...||||||||++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lar 142 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARL-----------PGQLSGGQRQRVALAR 142 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCC-----------cccCCHHHHHHHHHHH
Confidence 999999988875 99999987531 1 1 23455667777776544433 3489999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhc-CCEEEEEeCCeEEEecChHHHHh
Q 000553 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1428)
Q Consensus 747 aly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~el~~ 822 (1428)
|++++|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++.+.|+++++..
T Consensus 143 al~~~p~lllLDEP~~gLD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 143 CLVREQPILLLDEPFSALDPALRQEMLTL-VSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999888776 332122 37899999999999865 99999999999999999888754
No 496
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.9e-34 Score=317.21 Aligned_cols=188 Identities=23% Similarity=0.397 Sum_probs=155.7
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
++++|+++.|+.+ ..+|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (214)
T TIGR02673 2 IEFHNVSKAYPGG-----VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPL 76 (214)
T ss_pred EEEEeeeEEeCCC-----ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 5788999998421 2359999999999999999999999999999999999999999998754
Q ss_pred ---cEEEEcCCCCCCc-ccHHHHHhcCCC---CC----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHH
Q 000553 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1428)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqR 741 (1428)
.++|++|+|.++. .|++||+.++.. ++ +++.++.++..++...+.. ...+||||||||
T Consensus 77 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr 145 (214)
T TIGR02673 77 LRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQR 145 (214)
T ss_pred HHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHH
Confidence 4899999999886 599999987521 22 2345566666666544332 335899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCe
Q 000553 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQ 810 (1428)
Q Consensus 742 valARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~ 810 (1428)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+
T Consensus 146 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 146 VAIARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999988876 33212347899999999999875 99999999985
No 497
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-34 Score=300.40 Aligned_cols=205 Identities=26% Similarity=0.396 Sum_probs=168.1
Q ss_pred EEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccCCCeEEEEcC-------------
Q 000553 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1428)
Q Consensus 606 i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~~~G~i~~~~------------- 672 (1428)
.+++|.+..|.. ..+|+++||++++||+++++|+||+||||||++|+|..++.+|+|..+|
T Consensus 4 L~v~~l~~~YG~------~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 4 LEVENLSAGYGK------IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred eeEEeEeecccc------eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 567888887753 2359999999999999999999999999999999999999999999887
Q ss_pred -cEEEEcCCCCCCcc-cHHHHHhcCCCCChH-HHHHHHHHhcchHHHhcccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000553 673 -SIAYVPQVPWILSG-TIRDNILFGKNYDPQ-SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1428)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~~~-~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGGQkqRvalARaly 749 (1428)
.|+||||.-.+|.. ||+||+..|....+. ...+. .++.-.+.+|.- ......++.+|||||||-+|+||||.
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~L-ker~~~~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRL-KERRNQRAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhH-HHHhcCcccCCChHHHHHHHHHHHHh
Confidence 49999999999976 999999987433221 11110 022233444431 23456788899999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-C-CceEEEEccCcch-hhcCCEEEEEeCCeEEEecChHHHHhc
Q 000553 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-L-QKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAVS 823 (1428)
Q Consensus 750 ~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~-~-~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~el~~~ 823 (1428)
++|++|+||||+.+|-|...+.|++. +.. +. + +.||++|.++..+ ++.||+.|+|++|+|+.+|+.+|+..+
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~-i~~-l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEA-IKE-LRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHH-HHH-HHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999987 333 22 2 5699999999987 567999999999999999999998643
No 498
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.4e-32 Score=362.52 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=85.8
Q ss_pred CCch-hhhcCCCCCChhHHHHHHHHHHHccC--CCEEEEeccccCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhhhh
Q 000553 1315 GLET-FVKESGISFSVGQRQLICLARALLKS--SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN 1390 (1428)
Q Consensus 1315 gLdt-~v~e~G~~LSgGQrQrl~LARALL~~--~~ILlLDEaTS~lD~~te~~Iq~~i~~~~-~~~TvI~IaHrl~ti~~ 1390 (1428)
||+. .++.....|||||-||+-||+.|=.+ .=+.||||||.+|-+.--+.+.++|++.. .|.|||+|-|+.++|+.
T Consensus 1375 GL~YLtL~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~ 1454 (1809)
T PRK00635 1375 GLSYITLGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEH 1454 (1809)
T ss_pred CCCcccccCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh
Confidence 4443 34556678999999999999999875 35779999999999988888888888776 59999999999999999
Q ss_pred cCEEEEE------eCCeEEEecChhHHhcc
Q 000553 1391 MDEILIL------DHGHLVEQGNPQTLLQD 1414 (1428)
Q Consensus 1391 ~DrI~Vl------~~G~ive~g~p~eLl~~ 1414 (1428)
||.|+-| ..|+|+.+|+|++++.+
T Consensus 1455 AD~iidiGPgAG~~GG~iv~~G~~~~l~~~ 1484 (1809)
T PRK00635 1455 ADHLIHLGPGSGPQGGYLLSTSALKQSQPD 1484 (1809)
T ss_pred CCEEEEeCCCccCCCCEEEecCCHHHHhhh
Confidence 9999999 46999999999999753
No 499
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=320.77 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=166.3
Q ss_pred eEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCccC-----CCeEEEEcC-------
Q 000553 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1428)
Q Consensus 605 ~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~~-----~~G~i~~~~------- 672 (1428)
.++++|+++.|+. . .+++|+||+|++||+++|+||||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD---F---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC---c---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4789999999863 1 359999999999999999999999999999999998763 689998764
Q ss_pred --------cEEEEcCCCCCCcccHHHHHhcCCCC----C----hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccch
Q 000553 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1428)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSG 736 (1428)
.++|++|+|.+++.|++||+.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999998889999999876321 1 123344555555543332 224556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEeCCeEEEec
Q 000553 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1428)
Q Consensus 737 GQkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 815 (1428)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988765 433 3457899999999998765 9999999999999999
Q ss_pred ChHHHH
Q 000553 816 SSADLA 821 (1428)
Q Consensus 816 ~~~el~ 821 (1428)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988875
No 500
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=321.67 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=169.0
Q ss_pred ceEEEEccEEeecCCCccccccceeeeeeEecCCCEEEEEcCCCCcHHHHHHHHHcCcc-----CCCeEEEEcC------
Q 000553 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1428)
Q Consensus 604 ~~i~~~~~sf~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llG~~~-----~~~G~i~~~~------ 672 (1428)
..++++|++++|+. . .+|+|+||+|++||+++|+|+||||||||+++|+|... |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 46899999999853 2 35999999999999999999999999999999999876 4799998764
Q ss_pred ---------cEEEEcCCCCCCcccHHHHHhcCCCC---C---hHHHHHHHHHhcchHHHhcccCCCcccccCCCCccchH
Q 000553 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1428)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~c~l~~di~~l~~gd~t~ig~~g~~LSGG 737 (1428)
.++|++|+|.+++.|++|||.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999888999999876431 1 2334455666666544431 235567799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhc-CCEEEEEe---------
Q 000553 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 807 (1428)
Q Consensus 738 QkqRvalARaly~~~~illLDep~s~LD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~--------- 807 (1428)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988776 333 3445899999999998765 99999998
Q ss_pred CCeEEEecChHHHHh
Q 000553 808 KGQVKWIGSSADLAV 822 (1428)
Q Consensus 808 ~G~i~~~g~~~el~~ 822 (1428)
+|++++.|+.+|+..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999998854
Done!