Query 000555
Match_columns 1427
No_of_seqs 876 out of 5887
Neff 7.8
Searched_HMMs 46136
Date Mon Apr 1 19:06:54 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-242 4E-247 2232.8 99.6 1340 32-1427 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-228 2E-233 2271.0 146.9 1397 30-1427 39-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 3E-183 6E-188 1842.7 138.2 1274 96-1422 3-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 4.9E-95 1.1E-99 917.9 65.7 584 823-1424 36-659 (659)
5 KOG0061 Transporter, ABC super 100.0 3.8E-95 8E-100 909.0 60.8 579 823-1426 22-611 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-94 3.4E-99 915.9 64.3 567 850-1427 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 1E-91 2.2E-96 950.4 65.3 564 850-1424 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 1.2E-90 2.5E-95 934.4 63.5 593 823-1424 128-790 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 4.3E-84 9.3E-89 810.0 43.1 566 850-1425 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 6.2E-79 1.4E-83 762.9 58.7 585 116-779 21-609 (613)
11 PLN03211 ABC transporter G-25; 100.0 1.9E-77 4.1E-82 757.7 67.0 609 116-778 35-658 (659)
12 TIGR00955 3a01204 The Eye Pigm 100.0 3.5E-78 7.6E-83 766.5 59.7 570 163-777 34-612 (617)
13 KOG0055 Multidrug/pheromone ex 100.0 3.7E-75 8E-80 732.7 59.1 763 156-1064 355-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 2.5E-73 5.3E-78 734.3 58.1 738 165-1064 532-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 4.8E-69 1E-73 722.8 74.9 224 826-1076 1937-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 7E-68 1.5E-72 724.7 64.1 211 825-1064 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 9.7E-67 2.1E-71 714.6 61.9 211 825-1064 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 1.1E-65 2.3E-70 609.7 48.5 474 167-1064 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 2E-65 4.4E-70 694.1 57.6 217 825-1064 1164-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-64 5.3E-69 691.9 62.6 211 825-1064 1283-1503(1522)
21 PTZ00243 ABC transporter; Prov 100.0 2.1E-63 4.6E-68 680.1 65.1 211 825-1064 1307-1528(1560)
22 TIGR01271 CFTR_protein cystic 100.0 3E-63 6.6E-68 678.8 60.8 210 825-1064 1216-1435(1490)
23 PRK10261 glutathione transport 100.0 3.6E-63 7.7E-68 630.0 51.9 490 167-1064 29-548 (623)
24 PRK13549 xylose transporter AT 100.0 1.5E-63 3.2E-68 622.4 45.3 460 167-1066 18-491 (506)
25 PRK09700 D-allose transporter 100.0 2.5E-63 5.3E-68 621.5 44.6 458 167-1064 18-493 (510)
26 PRK10762 D-ribose transporter 100.0 3.5E-63 7.5E-68 618.3 45.3 449 167-1065 17-480 (501)
27 PRK15134 microcin C ABC transp 100.0 1.1E-62 2.4E-67 617.8 48.2 466 167-1064 22-510 (529)
28 TIGR03269 met_CoM_red_A2 methy 100.0 1.5E-62 3.3E-67 615.7 48.2 445 167-1064 13-512 (520)
29 PRK15439 autoinducer 2 ABC tra 100.0 2.1E-62 4.6E-67 611.5 47.2 453 167-1065 24-488 (510)
30 TIGR02633 xylG D-xylose ABC tr 100.0 4.5E-62 9.8E-67 609.1 46.4 460 167-1064 14-487 (500)
31 PRK11288 araG L-arabinose tran 100.0 5.9E-62 1.3E-66 607.2 45.6 451 167-1066 17-482 (501)
32 PRK10982 galactose/methyl gala 100.0 4E-61 8.7E-66 598.8 44.0 449 167-1064 11-475 (491)
33 COG4172 ABC-type uncharacteriz 100.0 3E-59 6.4E-64 518.5 42.9 470 165-1064 21-511 (534)
34 PRK10938 putative molybdenum t 100.0 5.8E-60 1.3E-64 588.6 41.8 445 168-1060 17-483 (490)
35 PRK15064 ABC transporter ATP-b 100.0 8.7E-58 1.9E-62 573.6 47.7 199 826-1064 319-520 (530)
36 PRK11819 putative ABC transpor 100.0 2.2E-57 4.8E-62 571.6 50.1 201 826-1063 324-527 (556)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.3E-56 2.8E-61 564.6 53.1 201 826-1063 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 3.2E-55 6.9E-60 548.8 41.3 211 826-1078 340-554 (590)
39 PRK11147 ABC transporter ATPas 100.0 2.8E-54 6E-59 550.5 50.2 202 826-1064 319-523 (635)
40 PRK10636 putative ABC transpor 100.0 3.5E-54 7.5E-59 547.8 49.3 198 826-1064 312-512 (638)
41 COG1129 MglA ABC-type sugar tr 100.0 2.5E-53 5.4E-58 501.5 42.6 448 165-1060 19-481 (500)
42 PLN03073 ABC transporter F fam 100.0 8.7E-52 1.9E-56 526.0 44.6 200 826-1064 508-709 (718)
43 COG0488 Uup ATPase components 100.0 6.8E-51 1.5E-55 495.3 43.9 220 166-416 15-239 (530)
44 COG3845 ABC-type uncharacteriz 100.0 4.8E-49 1E-53 453.5 39.4 455 166-1065 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 3E-44 6.6E-49 373.2 21.2 214 827-1064 3-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.3E-43 4.9E-48 366.7 19.3 220 166-438 14-238 (240)
47 KOG0927 Predicted transporter 100.0 1.2E-41 2.5E-46 392.5 30.0 200 826-1064 389-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 1.3E-41 2.8E-46 371.0 19.8 219 827-1065 2-227 (339)
49 COG1135 AbcC ABC-type metal io 100.0 1.4E-41 3.1E-46 370.7 19.4 223 165-439 17-245 (339)
50 COG1125 OpuBA ABC-type proline 100.0 1.3E-41 2.8E-46 359.4 18.1 210 166-417 13-225 (309)
51 COG1131 CcmA ABC-type multidru 100.0 5.5E-41 1.2E-45 386.6 24.3 224 826-1077 4-230 (293)
52 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.3E-41 1.6E-45 365.8 23.7 216 826-1066 4-224 (254)
53 COG1125 OpuBA ABC-type proline 100.0 1.8E-41 4E-46 358.3 17.8 213 827-1064 2-220 (309)
54 COG1127 Ttg2A ABC-type transpo 100.0 3.1E-41 6.8E-46 356.2 19.5 230 826-1079 8-249 (263)
55 TIGR01257 rim_protein retinal- 100.0 2.5E-36 5.5E-41 407.8 69.9 216 825-1064 927-1144(2272)
56 COG1116 TauB ABC-type nitrate/ 100.0 7.8E-41 1.7E-45 359.8 21.1 204 826-1055 3-207 (248)
57 COG1120 FepC ABC-type cobalami 100.0 7.3E-41 1.6E-45 368.1 20.9 228 826-1075 2-236 (258)
58 COG1118 CysA ABC-type sulfate/ 100.0 9.1E-41 2E-45 363.1 18.7 210 166-417 14-227 (345)
59 COG3638 ABC-type phosphate/pho 100.0 1.2E-40 2.5E-45 351.0 18.3 220 826-1066 3-234 (258)
60 COG1136 SalX ABC-type antimicr 100.0 5E-40 1.1E-44 354.6 23.5 209 827-1056 2-219 (226)
61 COG1131 CcmA ABC-type multidru 100.0 3.8E-40 8.1E-45 379.7 23.8 211 166-420 17-229 (293)
62 COG1127 Ttg2A ABC-type transpo 100.0 3.6E-40 7.9E-45 348.1 20.6 211 165-417 19-235 (263)
63 COG3839 MalK ABC-type sugar tr 100.0 2.1E-40 4.5E-45 378.1 20.0 217 169-437 18-235 (338)
64 COG1120 FepC ABC-type cobalami 100.0 1.5E-40 3.2E-45 365.7 17.6 211 166-416 14-227 (258)
65 COG3842 PotA ABC-type spermidi 100.0 1.5E-40 3.2E-45 381.3 17.9 223 166-439 17-240 (352)
66 COG1116 TauB ABC-type nitrate/ 100.0 3.1E-40 6.7E-45 355.3 19.1 192 167-404 16-207 (248)
67 COG3638 ABC-type phosphate/pho 100.0 6E-40 1.3E-44 345.6 18.9 216 166-417 16-237 (258)
68 COG1118 CysA ABC-type sulfate/ 100.0 4.5E-40 9.8E-45 357.7 18.3 205 851-1065 14-223 (345)
69 COG1136 SalX ABC-type antimicr 100.0 1.6E-39 3.4E-44 350.7 21.8 197 166-406 17-220 (226)
70 COG4555 NatA ABC-type Na+ tran 100.0 4.2E-40 9.1E-45 336.6 15.2 201 852-1064 15-217 (245)
71 COG3839 MalK ABC-type sugar tr 100.0 1.7E-39 3.6E-44 370.7 21.6 215 826-1065 3-219 (338)
72 COG4555 NatA ABC-type Na+ tran 100.0 8.5E-40 1.8E-44 334.4 15.8 207 166-417 14-222 (245)
73 COG1117 PstB ABC-type phosphat 100.0 1.5E-39 3.3E-44 336.0 17.8 217 826-1064 7-232 (253)
74 COG2884 FtsE Predicted ATPase 100.0 2.4E-39 5.3E-44 328.6 18.8 212 827-1063 2-220 (223)
75 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.4E-39 1.4E-43 350.6 21.3 208 168-417 18-227 (254)
76 COG3842 PotA ABC-type spermidi 100.0 3.4E-39 7.4E-44 370.1 19.2 215 826-1064 5-221 (352)
77 COG1117 PstB ABC-type phosphat 100.0 2.7E-39 5.9E-44 334.1 16.0 222 166-436 19-248 (253)
78 PRK13537 nodulation ABC transp 100.0 5.2E-38 1.1E-42 365.6 25.6 214 826-1064 7-222 (306)
79 KOG0058 Peptide exporter, ABC 100.0 1.5E-38 3.2E-43 382.1 21.1 215 160-417 474-691 (716)
80 TIGR02314 ABC_MetN D-methionin 100.0 1.2E-37 2.5E-42 365.2 25.5 217 827-1064 2-225 (343)
81 TIGR02314 ABC_MetN D-methionin 100.0 1.3E-37 2.9E-42 364.7 25.9 206 167-416 18-229 (343)
82 COG1124 DppF ABC-type dipeptid 100.0 7.6E-38 1.6E-42 332.9 20.8 206 167-417 20-231 (252)
83 cd03261 ABC_Org_Solvent_Resist 100.0 1.8E-37 3.8E-42 349.7 24.2 214 827-1064 1-221 (235)
84 KOG0058 Peptide exporter, ABC 100.0 2.1E-38 4.6E-43 380.8 17.5 219 823-1064 462-686 (716)
85 TIGR03265 PhnT2 putative 2-ami 100.0 1.7E-37 3.7E-42 366.5 24.7 214 826-1064 4-219 (353)
86 COG3840 ThiQ ABC-type thiamine 100.0 6.2E-38 1.3E-42 315.3 17.3 201 172-416 17-218 (231)
87 PRK11650 ugpC glycerol-3-phosp 100.0 2.1E-37 4.5E-42 366.2 24.9 215 826-1064 3-219 (356)
88 COG3840 ThiQ ABC-type thiamine 100.0 6.1E-38 1.3E-42 315.3 17.0 196 857-1064 17-214 (231)
89 PRK11432 fbpC ferric transport 100.0 3E-37 6.4E-42 363.8 25.4 214 826-1064 6-221 (351)
90 TIGR01186 proV glycine betaine 100.0 2.3E-37 5.1E-42 364.3 24.0 208 166-417 5-219 (363)
91 COG1122 CbiO ABC-type cobalt t 100.0 8.4E-38 1.8E-42 344.9 19.0 207 167-417 17-228 (235)
92 TIGR03258 PhnT 2-aminoethylpho 100.0 3.8E-37 8.1E-42 363.9 25.0 214 826-1064 5-223 (362)
93 PRK11650 ugpC glycerol-3-phosp 100.0 2.5E-37 5.4E-42 365.5 23.3 207 167-417 17-224 (356)
94 COG1137 YhbG ABC-type (unclass 100.0 4.5E-38 9.7E-43 321.4 14.4 206 850-1065 15-224 (243)
95 PRK11432 fbpC ferric transport 100.0 2.9E-37 6.3E-42 363.9 23.4 206 167-416 19-225 (351)
96 TIGR03265 PhnT2 putative 2-ami 100.0 3.3E-37 7.1E-42 364.1 23.4 207 167-417 17-224 (353)
97 PRK13536 nodulation factor exp 100.0 5.9E-37 1.3E-41 360.2 25.4 214 826-1064 41-256 (340)
98 cd03259 ABC_Carb_Solutes_like 100.0 5.5E-37 1.2E-41 340.5 23.6 210 828-1062 2-213 (213)
99 TIGR00960 3a0501s02 Type II (G 100.0 5.8E-37 1.3E-41 341.1 23.3 207 827-1055 2-214 (216)
100 PRK13537 nodulation ABC transp 100.0 4.8E-37 1E-41 357.5 23.5 206 167-417 20-227 (306)
101 PRK10851 sulfate/thiosulfate t 100.0 7.7E-37 1.7E-41 361.0 25.1 217 826-1064 2-221 (353)
102 COG1122 CbiO ABC-type cobalt t 100.0 3.7E-37 8.1E-42 339.8 20.9 215 826-1064 3-223 (235)
103 COG1124 DppF ABC-type dipeptid 100.0 4.7E-37 1E-41 326.8 20.3 217 826-1065 3-227 (252)
104 COG2884 FtsE Predicted ATPase 100.0 2.8E-37 6.2E-42 313.6 17.7 200 167-411 15-220 (223)
105 COG2274 SunT ABC-type bacterio 100.0 3E-35 6.6E-40 369.6 39.8 216 821-1064 466-691 (709)
106 PRK09452 potA putrescine/sperm 100.0 1.2E-36 2.5E-41 360.9 25.6 214 826-1064 14-229 (375)
107 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.4E-36 3.1E-41 338.8 24.7 215 828-1064 2-218 (220)
108 cd03269 ABC_putative_ATPase Th 100.0 1.2E-36 2.5E-41 337.1 23.5 209 827-1061 1-209 (210)
109 PRK09452 potA putrescine/sperm 100.0 7.7E-37 1.7E-41 362.5 23.3 207 167-417 27-234 (375)
110 TIGR03258 PhnT 2-aminoethylpho 100.0 8E-37 1.7E-41 361.1 23.4 207 167-417 18-228 (362)
111 cd03265 ABC_DrrA DrrA is the A 100.0 1.7E-36 3.6E-41 338.3 24.0 213 827-1064 1-216 (220)
112 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-36 3.9E-41 336.4 24.1 211 827-1062 1-213 (213)
113 TIGR01188 drrA daunorubicin re 100.0 8.8E-37 1.9E-41 355.9 22.5 202 851-1064 5-208 (302)
114 TIGR01288 nodI ATP-binding ABC 100.0 1.7E-36 3.7E-41 353.6 24.9 214 826-1064 4-219 (303)
115 TIGR01188 drrA daunorubicin re 100.0 1.2E-36 2.5E-41 354.9 22.9 206 167-417 6-213 (302)
116 PRK11607 potG putrescine trans 100.0 2.8E-36 6E-41 358.5 26.3 214 826-1064 19-234 (377)
117 PRK11153 metN DL-methionine tr 100.0 2E-36 4.4E-41 357.6 24.9 217 827-1064 2-225 (343)
118 cd03266 ABC_NatA_sodium_export 100.0 2E-36 4.3E-41 337.3 23.4 214 827-1061 2-217 (218)
119 cd03261 ABC_Org_Solvent_Resist 100.0 1.5E-36 3.3E-41 342.1 22.7 207 167-416 13-225 (235)
120 COG2274 SunT ABC-type bacterio 100.0 7.1E-37 1.5E-41 384.2 22.1 207 168-417 487-696 (709)
121 cd03219 ABC_Mj1267_LivG_branch 100.0 2.6E-36 5.7E-41 340.6 24.4 215 828-1064 2-227 (236)
122 PRK11000 maltose/maltodextrin 100.0 2.4E-36 5.1E-41 359.8 25.1 214 826-1064 3-218 (369)
123 cd03234 ABCG_White The White s 100.0 3.9E-36 8.4E-41 336.6 25.3 221 827-1062 4-226 (226)
124 COG0410 LivF ABC-type branched 100.0 2E-36 4.3E-41 320.1 21.4 206 167-417 16-226 (237)
125 cd03296 ABC_CysA_sulfate_impor 100.0 3.8E-36 8.3E-41 339.6 25.2 217 826-1064 2-221 (239)
126 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.2E-36 4.8E-41 337.0 22.7 208 827-1055 1-216 (218)
127 TIGR01186 proV glycine betaine 100.0 2.2E-36 4.7E-41 356.1 23.8 202 851-1064 5-214 (363)
128 cd03218 ABC_YhbG The ABC trans 100.0 3.1E-36 6.7E-41 339.1 24.0 213 827-1064 1-217 (232)
129 PRK10851 sulfate/thiosulfate t 100.0 2.1E-36 4.6E-41 357.3 23.1 211 167-417 15-226 (353)
130 TIGR02673 FtsE cell division A 100.0 3.5E-36 7.7E-41 334.3 23.1 206 827-1055 2-213 (214)
131 cd03268 ABC_BcrA_bacitracin_re 100.0 3.3E-36 7.1E-41 333.0 22.6 207 827-1062 1-208 (208)
132 COG0411 LivG ABC-type branched 100.0 9.9E-37 2.1E-41 324.8 17.7 221 165-417 15-239 (250)
133 TIGR03522 GldA_ABC_ATP gliding 100.0 4.3E-36 9.2E-41 349.7 24.5 212 827-1064 3-216 (301)
134 cd03260 ABC_PstB_phosphate_tra 100.0 3.2E-36 6.9E-41 337.7 22.6 214 827-1064 1-224 (227)
135 PRK11607 potG putrescine trans 100.0 3.1E-36 6.8E-41 358.0 23.6 207 167-417 32-239 (377)
136 COG4988 CydD ABC-type transpor 100.0 2.7E-36 5.9E-41 356.9 22.7 200 168-417 335-543 (559)
137 PRK09536 btuD corrinoid ABC tr 100.0 3.3E-36 7.2E-41 358.7 23.7 218 826-1065 3-224 (402)
138 cd03258 ABC_MetN_methionine_tr 100.0 4.5E-36 9.9E-41 337.9 23.2 217 827-1064 2-225 (233)
139 PRK13536 nodulation factor exp 100.0 4.8E-36 1E-40 352.5 24.3 206 167-417 54-261 (340)
140 cd03292 ABC_FtsE_transporter F 100.0 5.1E-36 1.1E-40 333.1 23.1 205 828-1055 2-212 (214)
141 PRK11000 maltose/maltodextrin 100.0 3.8E-36 8.2E-41 358.0 23.5 207 167-417 16-223 (369)
142 COG1137 YhbG ABC-type (unclass 100.0 2.6E-37 5.7E-42 315.8 11.4 209 166-417 16-228 (243)
143 COG4988 CydD ABC-type transpor 100.0 5.9E-36 1.3E-40 354.1 24.7 214 822-1064 316-538 (559)
144 cd03256 ABC_PhnC_transporter A 100.0 4.4E-36 9.6E-41 339.9 22.5 216 828-1064 2-229 (241)
145 cd03263 ABC_subfamily_A The AB 100.0 6.1E-36 1.3E-40 333.9 23.2 214 827-1064 1-216 (220)
146 KOG0057 Mitochondrial Fe/S clu 100.0 4.3E-36 9.3E-41 348.5 22.5 229 112-417 343-574 (591)
147 PRK13637 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 345.4 24.5 218 827-1064 3-229 (287)
148 PRK13637 cbiO cobalt transport 100.0 6.2E-36 1.3E-40 346.0 23.8 220 167-428 20-248 (287)
149 cd03226 ABC_cobalt_CbiO_domain 100.0 3.3E-36 7.2E-41 332.1 20.5 191 852-1058 13-204 (205)
150 PRK09493 glnQ glutamine ABC tr 100.0 8.9E-36 1.9E-40 337.0 24.5 214 827-1064 2-220 (240)
151 PRK11629 lolD lipoprotein tran 100.0 1.5E-35 3.3E-40 333.4 26.2 217 826-1064 5-229 (233)
152 PRK11153 metN DL-methionine tr 100.0 6.4E-36 1.4E-40 353.4 23.7 206 167-416 18-229 (343)
153 cd03265 ABC_DrrA DrrA is the A 100.0 6E-36 1.3E-40 333.8 22.1 205 167-415 13-219 (220)
154 PRK11264 putative amino-acid A 100.0 1E-35 2.2E-40 338.6 24.5 214 827-1064 4-228 (250)
155 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.1E-36 1.3E-40 343.2 22.7 203 850-1064 35-245 (269)
156 cd03295 ABC_OpuCA_Osmoprotecti 100.0 8.7E-36 1.9E-40 337.4 23.5 213 828-1064 2-220 (242)
157 COG4559 ABC-type hemin transpo 100.0 4.6E-36 1E-40 309.3 19.2 216 827-1065 2-226 (259)
158 PRK11248 tauB taurine transpor 100.0 1.3E-35 2.9E-40 337.4 25.0 212 827-1064 2-215 (255)
159 cd03224 ABC_TM1139_LivF_branch 100.0 7.4E-36 1.6E-40 333.8 22.3 211 827-1064 1-216 (222)
160 cd03259 ABC_Carb_Solutes_like 100.0 6.5E-36 1.4E-40 331.9 21.3 200 167-410 13-213 (213)
161 COG1123 ATPase components of v 100.0 2.1E-36 4.6E-41 360.0 18.5 301 52-417 192-519 (539)
162 TIGR02315 ABC_phnC phosphonate 100.0 6.3E-36 1.4E-40 339.0 21.5 217 827-1064 2-230 (243)
163 KOG0057 Mitochondrial Fe/S clu 100.0 1.6E-36 3.5E-41 352.0 16.5 211 824-1064 349-569 (591)
164 COG4559 ABC-type hemin transpo 100.0 4.4E-36 9.6E-41 309.5 17.9 208 167-417 14-230 (259)
165 PRK11831 putative ABC transpor 100.0 1.8E-35 4E-40 339.4 24.8 215 826-1064 7-228 (269)
166 COG0410 LivF ABC-type branched 100.0 7E-36 1.5E-40 315.9 19.5 213 827-1065 4-222 (237)
167 PRK13647 cbiO cobalt transport 100.0 1.5E-35 3.3E-40 340.6 24.0 215 826-1064 4-222 (274)
168 KOG0062 ATPase component of AB 100.0 2.5E-35 5.5E-40 338.6 25.5 201 826-1063 362-563 (582)
169 cd03264 ABC_drug_resistance_li 100.0 1.3E-35 2.9E-40 328.9 22.6 209 827-1062 1-211 (211)
170 cd03262 ABC_HisP_GlnQ_permease 100.0 1.2E-35 2.6E-40 329.9 22.3 206 827-1055 1-211 (213)
171 PRK13634 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 343.5 23.7 218 827-1064 3-230 (290)
172 PRK10908 cell division protein 100.0 2E-35 4.2E-40 330.1 23.9 208 827-1058 2-215 (222)
173 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.5E-35 3.2E-40 340.0 23.5 207 166-416 36-249 (269)
174 PRK13651 cobalt transporter AT 100.0 1.6E-35 3.5E-40 344.0 24.0 218 827-1064 3-249 (305)
175 COG0411 LivG ABC-type branched 100.0 7E-36 1.5E-40 318.3 19.0 207 850-1065 15-235 (250)
176 PRK13631 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 345.7 24.2 218 826-1064 21-260 (320)
177 PRK13634 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 344.5 22.1 218 167-428 20-249 (290)
178 cd03296 ABC_CysA_sulfate_impor 100.0 1.7E-35 3.6E-40 334.4 22.8 210 167-416 15-225 (239)
179 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.1E-35 6.8E-40 331.5 24.9 212 827-1064 2-216 (236)
180 PRK13643 cbiO cobalt transport 100.0 2.3E-35 5E-40 341.4 24.3 217 827-1064 2-228 (288)
181 PRK13643 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 342.9 22.6 226 167-436 19-255 (288)
182 cd03257 ABC_NikE_OppD_transpor 100.0 2.3E-35 5E-40 331.2 23.6 217 827-1062 2-228 (228)
183 TIGR01288 nodI ATP-binding ABC 100.0 1.9E-35 4.2E-40 344.8 23.7 206 167-417 17-224 (303)
184 cd03225 ABC_cobalt_CbiO_domain 100.0 1.3E-35 2.8E-40 329.1 21.0 193 852-1055 14-210 (211)
185 TIGR02211 LolD_lipo_ex lipopro 100.0 3E-35 6.6E-40 328.5 24.0 210 827-1058 2-219 (221)
186 PRK13650 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 341.8 21.9 217 167-428 20-243 (279)
187 cd03235 ABC_Metallic_Cations A 100.0 1.2E-35 2.7E-40 329.6 20.6 198 852-1061 12-212 (213)
188 PRK13646 cbiO cobalt transport 100.0 2.5E-35 5.3E-40 341.0 23.8 218 826-1064 2-230 (286)
189 cd03293 ABC_NrtD_SsuB_transpor 100.0 2E-35 4.4E-40 329.5 22.3 201 167-413 17-219 (220)
190 PRK11247 ssuB aliphatic sulfon 100.0 2.6E-35 5.7E-40 334.4 23.6 206 826-1064 12-218 (257)
191 PRK10895 lipopolysaccharide AB 100.0 2.6E-35 5.7E-40 333.3 23.5 214 827-1064 4-221 (241)
192 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-35 7.8E-40 333.4 24.6 214 827-1064 2-227 (247)
193 cd03258 ABC_MetN_methionine_tr 100.0 2E-35 4.4E-40 332.6 22.4 205 168-416 19-229 (233)
194 PRK13636 cbiO cobalt transport 100.0 3.2E-35 6.9E-40 339.6 24.2 215 826-1064 5-226 (283)
195 cd03219 ABC_Mj1267_LivG_branch 100.0 2.2E-35 4.8E-40 333.0 22.4 215 167-416 13-231 (236)
196 PRK10070 glycine betaine trans 100.0 2.4E-35 5.2E-40 351.1 23.7 207 167-417 41-254 (400)
197 PRK10619 histidine/lysine/argi 100.0 4.4E-35 9.5E-40 334.6 24.7 214 826-1064 5-236 (257)
198 COG4152 ABC-type uncharacteriz 100.0 1E-35 2.2E-40 312.7 17.7 212 827-1064 3-214 (300)
199 PRK15079 oligopeptide ABC tran 100.0 5.3E-35 1.2E-39 342.8 25.8 229 826-1064 8-246 (331)
200 PRK11614 livF leucine/isoleuci 100.0 3.1E-35 6.8E-40 331.9 23.0 212 826-1064 5-221 (237)
201 TIGR03005 ectoine_ehuA ectoine 100.0 4.4E-35 9.6E-40 333.6 24.2 214 827-1064 1-231 (252)
202 TIGR03522 GldA_ABC_ATP gliding 100.0 3.1E-35 6.6E-40 342.5 23.3 205 167-417 15-221 (301)
203 cd03301 ABC_MalK_N The N-termi 100.0 2.8E-35 6E-40 326.9 21.9 200 167-410 13-213 (213)
204 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-35 6.9E-40 330.9 22.6 205 167-416 13-221 (232)
205 PRK13650 cbiO cobalt transport 100.0 4E-35 8.6E-40 338.1 23.9 216 826-1064 4-224 (279)
206 TIGR03740 galliderm_ABC gallid 100.0 6.8E-35 1.5E-39 326.0 24.9 208 828-1065 2-209 (223)
207 TIGR01978 sufC FeS assembly AT 100.0 5.5E-35 1.2E-39 331.4 24.3 219 827-1064 1-229 (243)
208 TIGR03415 ABC_choXWV_ATP choli 100.0 3.4E-35 7.3E-40 347.3 23.2 209 165-417 35-254 (382)
209 TIGR00960 3a0501s02 Type II (G 100.0 1.9E-35 4.1E-40 328.9 19.8 195 167-406 16-216 (216)
210 COG4175 ProV ABC-type proline/ 100.0 6.9E-36 1.5E-40 324.6 15.8 222 166-439 40-268 (386)
211 PRK13641 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 338.5 24.2 219 826-1064 2-229 (287)
212 PRK11124 artP arginine transpo 100.0 6.1E-35 1.3E-39 330.6 24.0 214 826-1064 2-225 (242)
213 PRK14247 phosphate ABC transpo 100.0 7.6E-35 1.6E-39 331.5 24.9 217 826-1064 3-229 (250)
214 cd03256 ABC_PhnC_transporter A 100.0 3.9E-35 8.5E-40 332.2 22.4 214 167-416 14-233 (241)
215 PRK11629 lolD lipoprotein tran 100.0 5E-35 1.1E-39 329.2 22.9 201 167-412 22-229 (233)
216 PRK13651 cobalt transporter AT 100.0 3.4E-35 7.3E-40 341.3 22.1 219 167-430 20-270 (305)
217 PRK14273 phosphate ABC transpo 100.0 8.5E-35 1.8E-39 331.7 24.9 215 826-1064 7-233 (254)
218 cd03224 ABC_TM1139_LivF_branch 100.0 4.7E-35 1E-39 327.2 22.4 203 167-416 13-220 (222)
219 cd03263 ABC_subfamily_A The AB 100.0 3.6E-35 7.7E-40 327.7 21.2 203 167-415 15-219 (220)
220 cd03269 ABC_putative_ATPase Th 100.0 3.5E-35 7.7E-40 325.2 20.9 198 167-410 13-210 (210)
221 PRK13647 cbiO cobalt transport 100.0 5.4E-35 1.2E-39 336.1 23.1 215 168-427 19-239 (274)
222 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.7E-35 1.2E-39 323.8 22.6 193 857-1061 16-210 (211)
223 PRK14268 phosphate ABC transpo 100.0 9.9E-35 2.2E-39 331.7 25.0 214 826-1064 12-237 (258)
224 cd03234 ABCG_White The White s 100.0 5.7E-35 1.2E-39 327.2 22.5 207 166-410 19-226 (226)
225 PRK14267 phosphate ABC transpo 100.0 9.1E-35 2E-39 331.4 24.6 217 826-1064 4-232 (253)
226 PRK11300 livG leucine/isoleuci 100.0 8.2E-35 1.8E-39 332.3 24.2 217 826-1064 5-238 (255)
227 PRK13548 hmuV hemin importer A 100.0 7.8E-35 1.7E-39 332.2 23.9 213 827-1064 3-225 (258)
228 cd03266 ABC_NatA_sodium_export 100.0 6.8E-35 1.5E-39 325.0 22.9 198 168-410 19-218 (218)
229 cd03260 ABC_PstB_phosphate_tra 100.0 2.5E-35 5.3E-40 330.6 19.4 204 167-414 13-226 (227)
230 PRK09473 oppD oligopeptide tra 100.0 1.1E-34 2.5E-39 340.2 25.9 214 167-417 29-251 (330)
231 PRK13644 cbiO cobalt transport 100.0 8E-35 1.7E-39 334.7 24.1 213 827-1064 2-219 (274)
232 PRK11174 cysteine/glutathione 100.0 2.5E-35 5.3E-40 376.3 21.9 207 167-417 363-572 (588)
233 PRK13631 cbiO cobalt transport 100.0 5.4E-35 1.2E-39 341.5 22.9 221 167-431 39-282 (320)
234 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.9E-35 1.3E-39 330.6 22.5 208 167-416 14-224 (242)
235 PRK10070 glycine betaine trans 100.0 6.9E-35 1.5E-39 347.2 24.2 201 852-1064 41-249 (400)
236 PRK09536 btuD corrinoid ABC tr 100.0 4.2E-35 9E-40 349.3 22.3 209 167-416 16-227 (402)
237 TIGR03411 urea_trans_UrtD urea 100.0 9.7E-35 2.1E-39 329.0 24.2 215 827-1064 3-226 (242)
238 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.3E-35 7.1E-40 327.5 19.9 195 167-406 17-218 (218)
239 cd03233 ABC_PDR_domain1 The pl 100.0 1.4E-34 2.9E-39 317.8 24.3 183 165-410 18-202 (202)
240 PRK15079 oligopeptide ABC tran 100.0 6.7E-35 1.4E-39 341.9 23.3 210 167-417 34-251 (331)
241 PRK13652 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 334.4 24.5 214 827-1064 4-222 (277)
242 PRK13638 cbiO cobalt transport 100.0 9.3E-35 2E-39 334.2 24.0 213 827-1064 2-220 (271)
243 PRK14241 phosphate transporter 100.0 1.4E-34 3E-39 330.7 25.1 217 826-1064 4-237 (258)
244 PRK13646 cbiO cobalt transport 100.0 5.7E-35 1.2E-39 338.0 22.2 207 167-417 20-235 (286)
245 cd03226 ABC_cobalt_CbiO_domain 100.0 4.9E-35 1.1E-39 322.7 20.6 192 167-407 13-205 (205)
246 PRK13635 cbiO cobalt transport 100.0 1E-34 2.2E-39 334.4 24.1 215 826-1064 5-224 (279)
247 cd03268 ABC_BcrA_bacitracin_re 100.0 7E-35 1.5E-39 322.4 21.6 195 167-410 13-208 (208)
248 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.1E-34 2.3E-39 327.2 23.4 206 167-417 14-221 (236)
249 PRK11831 putative ABC transpor 100.0 8.7E-35 1.9E-39 333.9 23.0 207 167-416 20-232 (269)
250 cd03233 ABC_PDR_domain1 The pl 100.0 1.4E-34 3E-39 317.8 23.6 196 826-1062 3-202 (202)
251 KOG0055 Multidrug/pheromone ex 100.0 1.4E-35 2.9E-40 375.5 17.7 220 155-417 991-1213(1228)
252 PRK11231 fecE iron-dicitrate t 100.0 9.1E-35 2E-39 331.5 22.7 216 827-1064 3-222 (255)
253 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.6E-33 3.4E-38 365.2 37.0 209 825-1064 450-668 (686)
254 TIGR02315 ABC_phnC phosphonate 100.0 8.3E-35 1.8E-39 329.9 22.1 213 167-415 15-233 (243)
255 cd03232 ABC_PDR_domain2 The pl 100.0 1.2E-34 2.7E-39 315.7 22.6 190 826-1062 3-192 (192)
256 PRK13649 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 334.0 24.6 218 826-1064 2-229 (280)
257 PRK13635 cbiO cobalt transport 100.0 1E-34 2.3E-39 334.3 23.0 216 167-427 20-242 (279)
258 PRK10575 iron-hydroxamate tran 100.0 1.2E-34 2.7E-39 332.1 23.4 217 826-1064 11-232 (265)
259 TIGR02769 nickel_nikE nickel i 100.0 1.7E-34 3.8E-39 330.8 24.5 223 827-1064 3-235 (265)
260 PRK10584 putative ABC transpor 100.0 2.6E-34 5.6E-39 322.5 25.4 212 826-1059 6-225 (228)
261 PRK10253 iron-enterobactin tra 100.0 1.1E-34 2.5E-39 332.4 22.8 217 826-1064 7-228 (265)
262 PRK10261 glutathione transport 100.0 4.6E-35 9.9E-40 372.8 21.7 207 167-416 337-552 (623)
263 PRK11022 dppD dipeptide transp 100.0 1.8E-34 3.8E-39 338.4 24.9 214 167-417 20-243 (326)
264 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-34 4.8E-39 323.6 24.5 213 827-1064 1-215 (232)
265 PRK10744 pstB phosphate transp 100.0 2E-34 4.4E-39 329.5 24.6 217 824-1064 11-239 (260)
266 PRK09984 phosphonate/organopho 100.0 1.7E-34 3.7E-39 330.6 24.0 220 826-1065 4-238 (262)
267 PRK00635 excinuclease ABC subu 100.0 7.3E-33 1.6E-37 368.7 42.9 135 923-1065 759-902 (1809)
268 PRK13632 cbiO cobalt transport 100.0 2.3E-34 5E-39 330.7 24.9 205 167-416 22-230 (271)
269 PRK14242 phosphate transporter 100.0 2.5E-34 5.3E-39 327.8 24.9 219 826-1064 6-232 (253)
270 PRK13632 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 331.5 24.1 215 826-1064 7-226 (271)
271 PRK13636 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 334.0 23.2 207 167-417 19-231 (283)
272 PRK13639 cbiO cobalt transport 100.0 2.3E-34 5.1E-39 331.2 24.7 214 827-1064 2-221 (275)
273 TIGR03410 urea_trans_UrtE urea 100.0 1.6E-34 3.5E-39 324.7 22.7 211 827-1065 1-217 (230)
274 PRK11264 putative amino-acid A 100.0 1.4E-34 3E-39 329.4 22.5 205 167-416 16-232 (250)
275 TIGR01184 ntrCD nitrate transp 100.0 1.4E-34 3.1E-39 324.5 21.9 198 855-1064 1-199 (230)
276 TIGR03269 met_CoM_red_A2 methy 100.0 5.9E-35 1.3E-39 366.6 21.1 282 65-417 219-517 (520)
277 PRK14245 phosphate ABC transpo 100.0 2.7E-34 6E-39 326.7 24.5 219 826-1064 3-229 (250)
278 TIGR03873 F420-0_ABC_ATP propo 100.0 1.6E-34 3.6E-39 329.6 22.8 216 827-1064 2-221 (256)
279 PRK09493 glnQ glutamine ABC tr 100.0 1.4E-34 3.1E-39 327.2 22.0 205 167-416 14-224 (240)
280 TIGR00968 3a0106s01 sulfate AB 100.0 2.8E-34 6.1E-39 323.7 24.0 212 828-1064 2-215 (237)
281 COG4525 TauB ABC-type taurine 100.0 1.1E-34 2.4E-39 294.6 18.4 200 852-1064 18-219 (259)
282 PRK11022 dppD dipeptide transp 100.0 3.7E-34 7.9E-39 335.7 25.8 221 826-1064 3-238 (326)
283 PRK11308 dppF dipeptide transp 100.0 3.3E-34 7.1E-39 335.9 25.3 225 826-1064 5-239 (327)
284 PRK13549 xylose transporter AT 100.0 2E-34 4.2E-39 360.4 25.0 221 826-1066 5-229 (506)
285 TIGR03415 ABC_choXWV_ATP choli 100.0 1.7E-34 3.7E-39 341.3 23.1 203 850-1064 35-249 (382)
286 TIGR02211 LolD_lipo_ex lipopro 100.0 1.4E-34 3.1E-39 323.1 21.2 196 167-407 18-220 (221)
287 PRK14235 phosphate transporter 100.0 3.4E-34 7.5E-39 328.6 24.9 216 826-1064 19-246 (267)
288 TIGR01277 thiQ thiamine ABC tr 100.0 2.8E-34 6.1E-39 318.6 23.4 198 854-1063 13-212 (213)
289 PRK00349 uvrA excinuclease ABC 100.0 6.4E-33 1.4E-37 357.3 39.3 123 926-1064 791-922 (943)
290 TIGR02770 nickel_nikD nickel i 100.0 1.7E-34 3.7E-39 324.1 21.7 210 169-416 1-214 (230)
291 cd03267 ABC_NatA_like Similar 100.0 2.7E-34 5.8E-39 323.5 23.2 201 850-1062 32-236 (236)
292 TIGR03608 L_ocin_972_ABC putat 100.0 2E-34 4.4E-39 318.3 21.8 189 852-1052 11-206 (206)
293 PRK14269 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 325.4 23.8 219 827-1064 3-225 (246)
294 COG1245 Predicted ATPase, RNas 100.0 1.3E-33 2.8E-38 318.8 28.5 169 859-1053 361-530 (591)
295 PRK13641 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 334.5 21.8 206 167-416 20-233 (287)
296 COG1132 MdlB ABC-type multidru 100.0 4.9E-35 1.1E-39 371.4 19.1 215 825-1064 327-547 (567)
297 COG4525 TauB ABC-type taurine 100.0 1.6E-34 3.4E-39 293.4 18.7 203 167-415 18-222 (259)
298 TIGR01193 bacteriocin_ABC ABC- 100.0 3.1E-33 6.6E-38 363.7 36.1 211 825-1064 472-692 (708)
299 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.8E-33 8.3E-38 363.2 37.1 210 825-1064 476-695 (710)
300 PRK13648 cbiO cobalt transport 100.0 3.8E-34 8.3E-39 328.7 24.5 215 826-1064 7-226 (269)
301 PRK09473 oppD oligopeptide tra 100.0 4.3E-34 9.3E-39 335.3 25.0 224 826-1064 12-246 (330)
302 TIGR03410 urea_trans_UrtE urea 100.0 2.8E-34 6.1E-39 322.7 22.5 202 167-415 13-219 (230)
303 COG0444 DppD ABC-type dipeptid 100.0 2.5E-34 5.4E-39 320.0 21.7 216 166-417 17-243 (316)
304 PRK13633 cobalt transporter AT 100.0 3.3E-34 7.1E-39 330.9 23.5 219 826-1064 4-228 (280)
305 PRK11144 modC molybdate transp 100.0 2.1E-34 4.6E-39 341.6 22.5 196 172-417 16-218 (352)
306 PRK13547 hmuV hemin importer A 100.0 2.8E-34 6E-39 328.8 22.7 218 827-1064 2-239 (272)
307 PRK13645 cbiO cobalt transport 100.0 3.3E-34 7.1E-39 332.6 23.6 219 826-1064 6-235 (289)
308 PRK11308 dppF dipeptide transp 100.0 2.9E-34 6.3E-39 336.3 23.3 209 167-417 28-244 (327)
309 PRK14256 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 324.5 25.0 220 826-1064 4-231 (252)
310 PRK11248 tauB taurine transpor 100.0 2.8E-34 6.2E-39 326.6 22.3 201 167-413 14-216 (255)
311 PRK14257 phosphate ABC transpo 100.0 6E-34 1.3E-38 333.6 25.6 220 826-1064 80-308 (329)
312 PRK14237 phosphate transporter 100.0 6.4E-34 1.4E-38 326.4 25.3 222 823-1064 17-246 (267)
313 PRK11174 cysteine/glutathione 100.0 1.1E-34 2.3E-39 370.4 21.0 210 825-1064 348-567 (588)
314 cd03292 ABC_FtsE_transporter F 100.0 1.9E-34 4E-39 320.6 20.3 195 167-406 14-214 (214)
315 TIGR03375 type_I_sec_LssB type 100.0 1.3E-32 2.9E-37 357.0 40.9 212 825-1064 462-683 (694)
316 PRK14250 phosphate ABC transpo 100.0 3.2E-34 6.9E-39 324.1 22.4 209 826-1064 3-216 (241)
317 PRK13640 cbiO cobalt transport 100.0 4.8E-34 1E-38 329.6 24.2 217 826-1064 5-227 (282)
318 COG4618 ArpD ABC-type protease 100.0 1.7E-34 3.7E-39 331.6 20.2 213 165-419 347-562 (580)
319 PRK14259 phosphate ABC transpo 100.0 4.5E-34 9.7E-39 327.8 23.8 215 825-1064 12-248 (269)
320 cd03264 ABC_drug_resistance_li 100.0 2E-34 4.3E-39 319.5 20.2 197 167-410 13-211 (211)
321 cd03213 ABCG_EPDR ABCG transpo 100.0 5.6E-34 1.2E-38 310.9 23.2 190 826-1062 3-194 (194)
322 PRK10895 lipopolysaccharide AB 100.0 2.8E-34 6.2E-39 324.9 21.7 206 167-416 16-225 (241)
323 PRK15134 microcin C ABC transp 100.0 7.8E-35 1.7E-39 366.0 18.9 286 65-416 207-514 (529)
324 PRK13633 cobalt transporter AT 100.0 3.4E-34 7.5E-39 330.7 22.7 206 167-417 23-233 (280)
325 cd03299 ABC_ModC_like Archeal 100.0 6.1E-34 1.3E-38 320.6 24.1 199 854-1064 14-214 (235)
326 PRK10771 thiQ thiamine transpo 100.0 4.5E-34 9.8E-39 321.2 23.0 211 827-1064 2-214 (232)
327 PRK11247 ssuB aliphatic sulfon 100.0 2.7E-34 5.9E-39 326.1 21.4 194 168-413 26-219 (257)
328 PRK13644 cbiO cobalt transport 100.0 3.6E-34 7.8E-39 329.2 22.6 204 167-416 15-223 (274)
329 PRK11614 livF leucine/isoleuci 100.0 2.9E-34 6.2E-39 324.0 21.3 203 167-416 18-225 (237)
330 PRK15112 antimicrobial peptide 100.0 4.9E-34 1.1E-38 327.3 23.6 223 827-1064 5-234 (267)
331 TIGR02142 modC_ABC molybdenum 100.0 3.3E-34 7.1E-39 340.6 22.9 200 172-417 15-221 (354)
332 PRK13548 hmuV hemin importer A 100.0 3.8E-34 8.2E-39 326.5 22.5 206 167-416 15-229 (258)
333 PRK13652 cbiO cobalt transport 100.0 3.3E-34 7.2E-39 330.3 22.2 205 168-416 18-226 (277)
334 TIGR02769 nickel_nikE nickel i 100.0 4.5E-34 9.8E-39 327.4 23.2 208 166-416 23-239 (265)
335 PRK14239 phosphate transporter 100.0 7.4E-34 1.6E-38 323.8 24.5 215 826-1064 5-231 (252)
336 cd03257 ABC_NikE_OppD_transpor 100.0 3.3E-34 7.2E-39 321.8 21.2 201 168-410 19-228 (228)
337 TIGR02673 FtsE cell division A 100.0 2.8E-34 6E-39 319.1 20.3 194 167-405 15-214 (214)
338 PRK14274 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 325.0 24.1 215 826-1064 12-238 (259)
339 PRK14270 phosphate ABC transpo 100.0 7.8E-34 1.7E-38 323.2 24.3 215 826-1064 4-230 (251)
340 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.3E-34 9.2E-39 370.5 25.2 205 167-417 466-673 (686)
341 TIGR03005 ectoine_ehuA ectoine 100.0 4.6E-34 1E-38 325.3 22.5 206 167-416 13-235 (252)
342 TIGR01184 ntrCD nitrate transp 100.0 2.8E-34 6.1E-39 322.0 20.4 202 170-415 1-202 (230)
343 PRK15093 antimicrobial peptide 100.0 8.3E-34 1.8E-38 333.9 25.2 223 826-1064 3-243 (330)
344 PRK14240 phosphate transporter 100.0 9.2E-34 2E-38 322.6 24.8 215 826-1064 3-229 (250)
345 TIGR02982 heterocyst_DevA ABC 100.0 7.8E-34 1.7E-38 316.7 23.7 209 827-1055 2-217 (220)
346 TIGR02142 modC_ABC molybdenum 100.0 5.7E-34 1.2E-38 338.5 24.0 194 857-1064 15-216 (354)
347 cd03267 ABC_NatA_like Similar 100.0 4.4E-34 9.6E-39 321.7 21.9 201 166-410 33-236 (236)
348 PRK14260 phosphate ABC transpo 100.0 8.8E-34 1.9E-38 324.0 24.5 216 826-1064 7-238 (259)
349 PRK14244 phosphate ABC transpo 100.0 8E-34 1.7E-38 323.1 24.1 219 827-1064 6-232 (251)
350 PRK11144 modC molybdate transp 100.0 6.1E-34 1.3E-38 337.7 24.0 190 857-1064 16-213 (352)
351 PRK13648 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 327.4 22.8 205 167-416 22-230 (269)
352 TIGR00972 3a0107s01c2 phosphat 100.0 5.1E-34 1.1E-38 323.9 22.2 210 168-416 15-231 (247)
353 cd03297 ABC_ModC_molybdenum_tr 100.0 7.4E-34 1.6E-38 315.6 22.8 191 857-1062 16-214 (214)
354 COG4172 ABC-type uncharacteriz 100.0 2.7E-34 5.8E-39 320.1 19.2 288 65-417 208-516 (534)
355 PRK15093 antimicrobial peptide 100.0 9.7E-34 2.1E-38 333.4 25.1 218 167-416 20-247 (330)
356 TIGR00958 3a01208 Conjugate Tr 100.0 3.9E-34 8.4E-39 370.5 23.7 207 166-417 493-702 (711)
357 PRK13640 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 329.0 22.5 209 167-417 20-232 (282)
358 COG1132 MdlB ABC-type multidru 100.0 5.5E-34 1.2E-38 361.8 24.6 209 166-417 341-552 (567)
359 PRK10584 putative ABC transpor 100.0 6.2E-34 1.4E-38 319.4 22.2 198 167-409 23-227 (228)
360 PRK11300 livG leucine/isoleuci 100.0 6.3E-34 1.4E-38 325.0 22.6 221 167-416 18-242 (255)
361 PRK10619 histidine/lysine/argi 100.0 6.9E-34 1.5E-38 324.7 22.9 206 167-416 18-240 (257)
362 PRK13642 cbiO cobalt transport 100.0 9.6E-34 2.1E-38 326.5 24.2 216 826-1064 4-224 (277)
363 PRK14262 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 321.5 24.8 215 826-1064 3-229 (250)
364 PRK13649 cbiO cobalt transport 100.0 7.6E-34 1.7E-38 328.4 23.4 206 167-416 20-233 (280)
365 PRK13639 cbiO cobalt transport 100.0 8.4E-34 1.8E-38 326.6 23.6 204 168-416 16-225 (275)
366 PRK11176 lipid transporter ATP 100.0 5.4E-34 1.2E-38 363.7 24.1 209 167-417 356-567 (582)
367 TIGR03740 galliderm_ABC gallid 100.0 9.9E-34 2.1E-38 316.6 23.3 198 167-414 13-210 (223)
368 PRK10762 D-ribose transporter 100.0 7.4E-34 1.6E-38 354.8 24.7 218 827-1066 5-227 (501)
369 PRK10908 cell division protein 100.0 5.6E-34 1.2E-38 318.4 21.2 196 167-407 15-216 (222)
370 PRK13638 cbiO cobalt transport 100.0 7.7E-34 1.7E-38 326.6 22.9 205 167-416 14-224 (271)
371 PRK13642 cbiO cobalt transport 100.0 7E-34 1.5E-38 327.6 22.5 205 167-416 20-228 (277)
372 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-32 5.5E-37 353.6 39.6 211 825-1064 477-697 (711)
373 TIGR03411 urea_trans_UrtD urea 100.0 8E-34 1.7E-38 321.5 22.5 212 167-416 15-230 (242)
374 PRK14272 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 321.0 25.1 216 826-1064 4-231 (252)
375 COG4181 Predicted ABC-type tra 100.0 3.4E-34 7.5E-39 285.1 16.9 198 849-1059 20-225 (228)
376 PRK10790 putative multidrug tr 100.0 8.2E-34 1.8E-38 362.3 25.2 207 167-417 354-563 (592)
377 PRK14253 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 321.1 24.1 215 826-1064 3-228 (249)
378 COG4175 ProV ABC-type proline/ 100.0 1.9E-34 4.1E-39 313.5 16.1 201 853-1065 42-250 (386)
379 PRK14236 phosphate transporter 100.0 2E-33 4.3E-38 323.1 25.6 215 826-1064 25-251 (272)
380 COG4987 CydC ABC-type transpor 100.0 1.9E-34 4.1E-39 334.8 17.1 211 826-1064 336-556 (573)
381 cd03225 ABC_cobalt_CbiO_domain 100.0 4.8E-34 1E-38 316.5 19.7 194 167-405 14-211 (211)
382 PRK13543 cytochrome c biogenes 100.0 1.1E-33 2.3E-38 314.0 22.4 202 826-1054 11-212 (214)
383 PRK09984 phosphonate/organopho 100.0 6.9E-34 1.5E-38 325.7 21.6 216 167-415 17-240 (262)
384 TIGR02770 nickel_nikD nickel i 100.0 8.8E-34 1.9E-38 318.4 22.0 201 854-1064 1-210 (230)
385 PRK14250 phosphate ABC transpo 100.0 8.6E-34 1.9E-38 320.6 22.0 201 168-416 17-220 (241)
386 COG0444 DppD ABC-type dipeptid 100.0 1.5E-33 3.2E-38 313.9 23.3 223 827-1064 2-238 (316)
387 PRK14247 phosphate ABC transpo 100.0 1.8E-33 3.9E-38 320.2 24.6 213 167-416 16-233 (250)
388 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.4E-34 1.4E-38 315.4 20.4 195 172-410 16-211 (211)
389 PRK11176 lipid transporter ATP 100.0 4.1E-34 9E-39 364.8 21.6 213 825-1064 340-562 (582)
390 TIGR01846 type_I_sec_HlyB type 100.0 1.5E-32 3.2E-37 356.2 36.4 212 825-1064 454-675 (694)
391 PRK11701 phnK phosphonate C-P 100.0 1.6E-33 3.5E-38 321.9 24.2 215 826-1064 6-236 (258)
392 COG4181 Predicted ABC-type tra 100.0 7.1E-34 1.5E-38 282.8 18.4 201 163-408 19-226 (228)
393 PRK10418 nikD nickel transport 100.0 1.6E-33 3.5E-38 320.9 24.2 214 825-1064 3-225 (254)
394 PRK14257 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 331.6 23.2 211 167-416 95-312 (329)
395 cd03300 ABC_PotA_N PotA is an 100.0 1.3E-33 2.9E-38 317.3 23.1 206 167-416 13-219 (232)
396 PRK14258 phosphate ABC transpo 100.0 2E-33 4.3E-38 321.4 24.8 221 826-1064 7-240 (261)
397 PRK13645 cbiO cobalt transport 100.0 6.9E-34 1.5E-38 329.9 21.3 206 167-416 24-239 (289)
398 cd03299 ABC_ModC_like Archeal 100.0 1.2E-33 2.6E-38 318.1 22.7 204 169-416 14-218 (235)
399 PRK14268 phosphate ABC transpo 100.0 1E-33 2.2E-38 323.3 22.3 210 167-416 25-241 (258)
400 cd03231 ABC_CcmA_heme_exporter 100.0 9.6E-34 2.1E-38 311.1 21.1 195 828-1052 2-198 (201)
401 PRK15112 antimicrobial peptide 100.0 9.9E-34 2.1E-38 324.8 22.0 207 167-416 26-238 (267)
402 PRK14248 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 322.5 24.8 215 826-1064 21-247 (268)
403 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.1E-34 1.3E-38 370.7 22.9 206 167-417 492-700 (710)
404 PRK13538 cytochrome c biogenes 100.0 1.2E-33 2.6E-38 311.3 21.6 199 827-1052 2-202 (204)
405 PRK14273 phosphate ABC transpo 100.0 1.1E-33 2.3E-38 322.7 21.9 210 168-416 21-237 (254)
406 PRK09700 D-allose transporter 100.0 1.1E-33 2.3E-38 354.4 24.1 218 826-1065 5-230 (510)
407 PRK11124 artP arginine transpo 100.0 1E-33 2.2E-38 320.6 21.5 204 167-415 15-228 (242)
408 PRK14275 phosphate ABC transpo 100.0 2E-33 4.4E-38 324.9 24.3 215 826-1064 39-265 (286)
409 PRK14242 phosphate transporter 100.0 1.2E-33 2.6E-38 322.2 22.2 210 168-416 20-236 (253)
410 TIGR00630 uvra excinuclease AB 100.0 6.5E-32 1.4E-36 347.4 40.7 123 926-1064 789-920 (924)
411 PRK11160 cysteine/glutathione 100.0 1.3E-33 2.7E-38 357.9 24.6 201 167-417 353-562 (574)
412 PRK14251 phosphate ABC transpo 100.0 2.4E-33 5.1E-38 319.4 24.3 215 826-1064 4-230 (251)
413 COG4604 CeuD ABC-type enteroch 100.0 7.9E-35 1.7E-39 296.4 10.8 206 850-1065 12-221 (252)
414 PRK10744 pstB phosphate transp 100.0 2.6E-33 5.6E-38 320.4 24.7 209 168-416 27-243 (260)
415 PRK14261 phosphate ABC transpo 100.0 2.4E-33 5.3E-38 319.5 24.3 215 826-1064 6-232 (253)
416 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-33 3.4E-38 312.7 22.0 199 169-411 13-212 (213)
417 PRK10253 iron-enterobactin tra 100.0 9.3E-34 2E-38 324.8 20.7 210 167-416 20-232 (265)
418 PRK14249 phosphate ABC transpo 100.0 3.1E-33 6.6E-38 318.4 24.8 219 826-1064 4-230 (251)
419 PRK11160 cysteine/glutathione 100.0 8.6E-34 1.9E-38 359.3 22.4 212 825-1064 337-557 (574)
420 PRK14269 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 319.3 22.5 212 167-416 15-229 (246)
421 PRK14254 phosphate ABC transpo 100.0 4.2E-33 9.1E-38 321.8 26.1 213 826-1064 39-264 (285)
422 PRK10575 iron-hydroxamate tran 100.0 1.1E-33 2.3E-38 324.4 21.0 210 167-416 24-236 (265)
423 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.1E-33 4.5E-38 313.6 22.7 192 850-1062 33-224 (224)
424 PRK14237 phosphate transporter 100.0 4E-33 8.6E-38 319.8 25.6 211 167-416 33-250 (267)
425 PRK10771 thiQ thiamine transpo 100.0 1.5E-33 3.2E-38 317.1 21.6 202 172-417 17-219 (232)
426 TIGR00968 3a0106s01 sulfate AB 100.0 2E-33 4.3E-38 316.8 22.6 206 167-416 13-219 (237)
427 PRK14271 phosphate ABC transpo 100.0 3.2E-33 6.8E-38 321.6 24.7 219 826-1064 21-246 (276)
428 cd03235 ABC_Metallic_Cations A 100.0 7.1E-34 1.5E-38 315.6 18.6 200 167-410 12-213 (213)
429 COG4987 CydC ABC-type transpor 100.0 2.8E-34 6E-39 333.4 15.9 210 157-417 342-561 (573)
430 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.4E-33 2.9E-38 322.4 21.3 210 826-1064 2-220 (275)
431 PRK14235 phosphate transporter 100.0 1.9E-33 4.1E-38 322.4 22.6 212 167-416 32-250 (267)
432 TIGR02633 xylG D-xylose ABC tr 100.0 2.3E-33 5.1E-38 350.7 25.4 219 827-1065 2-226 (500)
433 PRK14255 phosphate ABC transpo 100.0 4.1E-33 8.9E-38 317.6 25.0 215 826-1064 5-231 (252)
434 PRK10790 putative multidrug tr 100.0 1.9E-33 4.1E-38 359.0 24.7 210 825-1064 339-558 (592)
435 cd03230 ABC_DR_subfamily_A Thi 100.0 1.8E-33 3.9E-38 301.4 20.3 168 828-1055 2-171 (173)
436 PRK14267 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 320.1 22.2 213 167-416 17-236 (253)
437 PRK14263 phosphate ABC transpo 100.0 4.6E-33 1E-37 317.8 24.9 219 825-1064 7-240 (261)
438 TIGR03375 type_I_sec_LssB type 100.0 1.4E-33 3.1E-38 366.1 23.2 208 167-417 478-688 (694)
439 PRK15056 manganese/iron transp 100.0 2.8E-33 6E-38 322.0 23.0 218 826-1065 6-226 (272)
440 cd03262 ABC_HisP_GlnQ_permease 100.0 1.3E-33 2.7E-38 313.7 19.5 195 167-406 13-213 (213)
441 PRK15439 autoinducer 2 ABC tra 100.0 2.3E-33 5.1E-38 350.5 24.2 211 826-1065 11-225 (510)
442 CHL00131 ycf16 sulfate ABC tra 100.0 5.6E-33 1.2E-37 316.6 25.2 220 826-1064 7-236 (252)
443 PRK10247 putative ABC transpor 100.0 2.4E-33 5.3E-38 313.6 21.8 204 826-1057 7-216 (225)
444 PRK14238 phosphate transporter 100.0 3.5E-33 7.6E-38 320.7 23.5 215 826-1064 24-250 (271)
445 PRK14256 phosphate ABC transpo 100.0 3.5E-33 7.6E-38 318.1 23.3 212 167-416 17-235 (252)
446 PRK10418 nikD nickel transport 100.0 4.3E-33 9.2E-38 317.5 23.9 209 168-416 17-229 (254)
447 PRK14245 phosphate ABC transpo 100.0 2.8E-33 6E-38 318.5 22.4 210 167-416 16-233 (250)
448 TIGR01978 sufC FeS assembly AT 100.0 3E-33 6.6E-38 317.1 22.5 212 167-416 13-233 (243)
449 PRK11288 araG L-arabinose tran 100.0 2.9E-33 6.3E-38 349.5 24.5 216 826-1063 4-223 (501)
450 KOG0056 Heavy metal exporter H 100.0 2.8E-34 6.2E-39 324.0 13.7 209 166-417 550-761 (790)
451 PRK14274 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 320.0 22.3 211 167-416 25-242 (259)
452 PRK10419 nikE nickel transport 100.0 4.8E-33 1E-37 319.1 24.1 224 827-1065 4-237 (268)
453 COG4148 ModC ABC-type molybdat 100.0 4.1E-34 8.8E-39 305.7 14.1 196 172-417 16-218 (352)
454 PRK14239 phosphate transporter 100.0 3.5E-33 7.6E-38 318.3 22.7 211 167-416 18-235 (252)
455 cd03252 ABCC_Hemolysin The ABC 100.0 1.1E-33 2.5E-38 319.2 18.4 210 827-1064 1-220 (237)
456 PRK14265 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 319.5 24.3 214 826-1064 20-253 (274)
457 PRK11231 fecE iron-dicitrate t 100.0 2.1E-33 4.6E-38 320.3 20.6 208 167-416 15-226 (255)
458 TIGR01166 cbiO cobalt transpor 100.0 2.4E-33 5.3E-38 305.5 20.0 179 851-1039 4-188 (190)
459 PRK14259 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 318.3 24.3 210 167-417 26-253 (269)
460 COG4152 ABC-type uncharacteriz 100.0 1.1E-33 2.5E-38 297.3 16.5 209 165-419 13-221 (300)
461 PRK14241 phosphate transporter 100.0 4.1E-33 8.9E-38 318.5 22.6 212 167-416 17-241 (258)
462 PRK13539 cytochrome c biogenes 100.0 3.2E-33 6.9E-38 308.5 20.9 197 827-1053 3-199 (207)
463 PRK14240 phosphate transporter 100.0 4.3E-33 9.2E-38 317.1 22.5 210 168-416 17-233 (250)
464 TIGR03873 F420-0_ABC_ATP propo 100.0 3.7E-33 8E-38 318.5 22.0 208 167-416 14-225 (256)
465 cd03297 ABC_ModC_molybdenum_tr 100.0 3.6E-33 7.8E-38 310.1 21.2 192 172-410 16-214 (214)
466 PTZ00265 multidrug resistance 100.0 1.9E-33 4.2E-38 382.6 23.1 219 161-417 1175-1452(1466)
467 PRK14246 phosphate ABC transpo 100.0 8.7E-33 1.9E-37 314.8 24.5 215 827-1064 11-236 (257)
468 PRK14243 phosphate transporter 100.0 6.2E-33 1.3E-37 317.7 23.3 214 826-1064 10-243 (264)
469 TIGR02323 CP_lyasePhnK phospho 100.0 7.6E-33 1.7E-37 315.6 23.9 215 826-1064 3-233 (253)
470 PRK11701 phnK phosphonate C-P 100.0 5.3E-33 1.1E-37 317.6 22.5 207 167-416 19-240 (258)
471 COG4598 HisP ABC-type histidin 100.0 7.4E-34 1.6E-38 284.3 13.3 204 850-1064 17-236 (256)
472 PRK09580 sufC cysteine desulfu 100.0 9.3E-33 2E-37 314.1 24.3 219 827-1064 2-230 (248)
473 TIGR02982 heterocyst_DevA ABC 100.0 7.8E-33 1.7E-37 308.6 23.1 196 167-406 18-219 (220)
474 TIGR01193 bacteriocin_ABC ABC- 100.0 2.6E-33 5.7E-38 364.4 22.4 208 167-417 487-697 (708)
475 PRK10982 galactose/methyl gala 100.0 4.5E-33 9.7E-38 347.2 23.6 206 852-1066 11-220 (491)
476 PRK14244 phosphate ABC transpo 100.0 8.6E-33 1.9E-37 314.7 23.8 212 167-416 18-236 (251)
477 COG4618 ArpD ABC-type protease 100.0 1.3E-33 2.8E-38 324.5 17.0 224 816-1064 324-555 (580)
478 PRK14262 phosphate ABC transpo 100.0 5.6E-33 1.2E-37 316.1 22.2 212 167-417 16-234 (250)
479 PRK14266 phosphate ABC transpo 100.0 8.6E-33 1.9E-37 314.6 23.7 219 826-1064 3-229 (250)
480 PRK03695 vitamin B12-transport 100.0 5.5E-33 1.2E-37 315.1 22.0 197 854-1064 11-217 (248)
481 KOG0056 Heavy metal exporter H 100.0 3E-34 6.6E-39 323.8 11.4 218 822-1064 533-756 (790)
482 cd03213 ABCG_EPDR ABCG transpo 100.0 7.2E-33 1.6E-37 302.2 21.9 171 167-410 22-194 (194)
483 TIGR01189 ccmA heme ABC export 100.0 5.5E-33 1.2E-37 304.6 21.0 194 828-1051 2-197 (198)
484 PRK14270 phosphate ABC transpo 100.0 6.7E-33 1.4E-37 315.6 22.2 211 167-416 17-234 (251)
485 cd03245 ABCC_bacteriocin_expor 100.0 4.1E-33 8.9E-38 311.1 20.0 208 827-1061 3-219 (220)
486 KOG0066 eIF2-interacting prote 100.0 2.8E-32 6E-37 303.6 26.3 200 825-1064 585-786 (807)
487 cd03229 ABC_Class3 This class 100.0 3.7E-33 8E-38 300.5 18.7 171 827-1055 1-177 (178)
488 cd03251 ABCC_MsbA MsbA is an e 100.0 2.1E-33 4.5E-38 316.5 17.5 210 827-1064 1-220 (234)
489 PRK13547 hmuV hemin importer A 100.0 5.5E-33 1.2E-37 318.1 20.8 213 167-416 14-243 (272)
490 PRK13546 teichoic acids export 100.0 1.9E-32 4.2E-37 311.9 25.1 218 825-1064 3-227 (264)
491 COG1129 MglA ABC-type sugar tr 100.0 1.1E-32 2.4E-37 326.5 23.8 229 826-1076 8-243 (500)
492 TIGR02324 CP_lyasePhnL phospho 100.0 1.1E-32 2.4E-37 308.5 22.7 210 827-1053 2-223 (224)
493 PRK14252 phosphate ABC transpo 100.0 1.7E-32 3.6E-37 314.6 24.6 215 825-1064 15-244 (265)
494 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3E-33 6.5E-38 316.0 18.2 210 828-1064 2-221 (238)
495 PRK14272 phosphate ABC transpo 100.0 1.2E-32 2.7E-37 313.8 23.2 212 167-416 17-235 (252)
496 PRK14248 phosphate ABC transpo 100.0 2.5E-32 5.4E-37 313.7 25.9 211 167-416 34-251 (268)
497 cd03252 ABCC_Hemolysin The ABC 100.0 4.2E-33 9.2E-38 314.6 19.1 206 167-417 15-225 (237)
498 PRK14263 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 314.6 22.5 209 167-416 21-244 (261)
499 TIGR03608 L_ocin_972_ABC putat 100.0 7.6E-33 1.6E-37 305.8 20.5 189 167-401 11-206 (206)
500 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.9E-33 8.5E-38 315.1 18.5 206 167-417 16-226 (238)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-242 Score=2232.78 Aligned_cols=1340 Identities=52% Similarity=0.878 Sum_probs=1245.7
Q ss_pred ccchhhhhHHHHhhCCCcchhhhhhcccCCCCCCCCcceeeecccccchhhhHHHHHHhhhcCccCHHHHHHHHHHHHhh
Q 000555 32 EEDEDELMWAAIARLPSQKQGNFALLKTTTPRNGGEAKTETIDVRKLNRSRRELVVSKALATNDQDNYKLLSAIKERLDR 111 (1427)
Q Consensus 32 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (1427)
+||||+|||||+||||+++| +.+.+.. + + ++|+.+++..|+...+++.....++|+++++.++++|.++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~--~-~-----~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~ 80 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIF--E-S-----EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDR 80 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhc--c-C-----cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCc
Confidence 44999999999999999999 4443311 0 1 3899999999999999999999999999999999999998
Q ss_pred cCCCCCccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCC
Q 000555 112 VGIEVPKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPAS 191 (1427)
Q Consensus 112 ~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 191 (1427)
+ ++|.++++++++.+++++..+ ||+.|...+.++..+...+.. ++...+||+|+|+.++|||+++++|||||
T Consensus 81 ~--~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgs 152 (1391)
T KOG0065|consen 81 V--ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGS 152 (1391)
T ss_pred c--cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCC
Confidence 7 899999999999999988765 899999888888776555443 45567899999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhH
Q 000555 192 GKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNR 271 (1427)
Q Consensus 192 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ 271 (1427)
||||||++|+|.++......|+|+|||++.+++..++.++|++|+|.|+|.+||||+|+|+++|+++ +.+ .++..|
T Consensus 153 G~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~--~~r--~~~~~R 228 (1391)
T KOG0065|consen 153 GKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGP--GSR--YDEVSR 228 (1391)
T ss_pred chHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCC--ccc--cccccH
Confidence 9999999999999887777899999999999998899999999999999999999999999999987 222 224455
Q ss_pred HHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEe
Q 000555 272 LEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMD 351 (1427)
Q Consensus 272 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLD 351 (1427)
+|+.+ ..+|++++.+||++|+||.|||+++||+||||||||++|++++++++++++|
T Consensus 229 ~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 229 REKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred HHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 54422 1589999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCC
Q 000555 352 EISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKG 431 (1427)
Q Consensus 352 EPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~ 431 (1427)
|+|+|||++|+.+++++||+++|..+.|++++++||+++++++||+|++|++|+++|+||++++++||+++||.||++++
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~ 365 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKG 365 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHH
Q 000555 432 VADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTC 511 (1427)
Q Consensus 432 ~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 511 (1427)
+|||++++++++++.++|.+++.|+.+.+++|+.+.|.+++.++++..+++.++++.+.++.++..++|.++.|+|+++|
T Consensus 366 ~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c 445 (1391)
T KOG0065|consen 366 TADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKAC 445 (1391)
T ss_pred HHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHH
Q 000555 512 FAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYK 591 (1427)
Q Consensus 512 ~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~r 591 (1427)
+.|++++++||..+++++.++.+++++++|++|+++.+ ++..+...+.|++||++++.+|+++++++++++++|||+|
T Consensus 446 ~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~K 523 (1391)
T KOG0065|consen 446 TIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYK 523 (1391)
T ss_pred HHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHH
Confidence 99999999999999999999999999999999999884 4456788899999999999999999999999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Q 000555 592 QRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVAN 671 (1427)
Q Consensus 592 qr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~ 671 (1427)
||+..||++|+++++++++++|..++++++|.+|+||++|+.+++++||+++++++++++++.++||+++++++++..|+
T Consensus 524 hr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An 603 (1391)
T KOG0065|consen 524 HRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIAN 603 (1391)
T ss_pred hhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccCccccc------------ccc---cccccc
Q 000555 672 TFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAARWKKK------------SVI---GDNTIG 736 (1427)
Q Consensus 672 ~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~G 736 (1427)
.++++.++++++++||+|+..+||+||+|++|++|+.|+++++++|||.+.+|.|. ... .+.+.|
T Consensus 604 ~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G 683 (1391)
T KOG0065|consen 604 LIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLG 683 (1391)
T ss_pred hHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccC
Confidence 99999999999999999999999999999999999999999999999999999987 111 134588
Q ss_pred cceecccccC-----CCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhh-h--ccccCC
Q 000555 737 YNVLHTHSLP-----SGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQ-F--EINTTS 808 (1427)
Q Consensus 737 ~~~l~~~~~~-----~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 808 (1427)
.+++..+++. +..+|+|+++|++++|.++|+++..+++.|.++..+.+..+..++.......... . ..+...
T Consensus 684 ~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 763 (1391)
T KOG0065|consen 684 NDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAGSSSEIEKLD 763 (1391)
T ss_pred ceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhccccccccccc
Confidence 8999988877 8889999999999999999999999999999999888776554332221111100 0 000001
Q ss_pred CCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCC
Q 000555 809 APESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGR 888 (1427)
Q Consensus 809 ~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~ 888 (1427)
.....++++++.|+.+..++++||.|.+++|-.++.+| +++++|+|||+.++||.++||||+||||||||||+|+||
T Consensus 764 ~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R 840 (1391)
T KOG0065|consen 764 DSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGR 840 (1391)
T ss_pred cccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcC
Confidence 11111356778899899999999999999998877666 678999999999999999999999999999999999999
Q ss_pred CCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccccc
Q 000555 889 KTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRD 968 (1427)
Q Consensus 889 ~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~ 968 (1427)
+++|.++|+|.|||.|.++..|+|.+|||.|+|.|.|.+||||+|.|+|.||+|.+++.+++.++|++|++.++|++++|
T Consensus 841 ~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~d 920 (1391)
T KOG0065|consen 841 KTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYAD 920 (1391)
T ss_pred cccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhh
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Q 000555 969 ALVGFPGSSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1047 (1427)
Q Consensus 969 ~~vg~~~~~~LSgGqrqrl~ia~aL~~~p-~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1047 (1427)
.+||.+| +|||.+|||||+||++|++|| .||||||||||||++++..|++.+|+++++|+|||||+||||.++++.||
T Consensus 921 aiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD 999 (1391)
T KOG0065|consen 921 ALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFD 999 (1391)
T ss_pred hhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHh
Confidence 9999999 999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCCCCCCCCCchhhHHhhcccchhhcccccHHHHHhccHHHHHHHHHh
Q 000555 1048 ELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIPSIPSGYNPATWMLEVTTAATEEKLGVDFADVYRSSEQYRVVESSI 1127 (1427)
Q Consensus 1048 ~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 1127 (1427)
++++|++||+++|+||+|++++++++||+++||+ +||+..||||||||+++.+.+.+.+.||++.|++|++++++++++
T Consensus 1000 ~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~-~~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~~e~v 1078 (1391)
T KOG0065|consen 1000 ELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGV-KCISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRNKELV 1078 (1391)
T ss_pred HHHHHhcCCeEEEecCcccccHHHHHHHHhcCCc-cCCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHHHHHH
Confidence 9999999999999999999999999999999987 577777999999999999988888999999999999999999999
Q ss_pred hhcCCCCCC-CCCCCCCCccCCChHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHH
Q 000555 1128 KNLSVPPPG-SEPLKFSSTYSQDPLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMV 1206 (1427)
Q Consensus 1128 ~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~ 1206 (1427)
++++.++++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||+.|+ ++||++|.
T Consensus 1079 ~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~lqn~ 1155 (1391)
T KOG0065|consen 1079 KELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQGLQNA 1155 (1391)
T ss_pred HHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHHHHHH
Confidence 999999888 77888889999999999999999999999999999999999999999999999999995 69999999
Q ss_pred HhHHHHHHHHhHHHHHhhhhHHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHH
Q 000555 1207 MGALYASCLFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKF 1286 (1427)
Q Consensus 1207 ~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f 1286 (1427)
+|++|+++++.+.+++...+|.+..||.++|||+++||||+.+|++||+++|+||.++++++|.+|+|+|+||.+++.+|
T Consensus 1156 m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~ 1235 (1391)
T KOG0065|consen 1156 MGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKF 1235 (1391)
T ss_pred HHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHH
Confidence 99999999999999988889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhh
Q 000555 1287 FLFLVFMFLTFSYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQL 1366 (1427)
Q Consensus 1287 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~ 1366 (1427)
+||++++++..++++++|||+.+++||.++|+++.+++++++++||||++|++.||.||+|+||+||++|.++|++..++
T Consensus 1236 ~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~ 1315 (1391)
T KOG0065|consen 1236 FWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQL 1315 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccc-------CCCCCCHHHHHHhhcC----CCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000555 1367 GDVETMIVE-------PTFRGTVKEYLEESLG----FGPGMVGVSAAVLVAFSLLFFGSFAFSVKFLNFQKR 1427 (1427)
Q Consensus 1367 ~~~~~~~~~-------~~~~~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1427 (1427)
||.+..|.. |..+.||++|++++|| |.++.......+..+|.+++.+++.+++++.|+|||
T Consensus 1316 ~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1316 GDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred CCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 999887752 2244799999999999 999998888888889999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=9.9e-229 Score=2270.95 Aligned_cols=1397 Identities=58% Similarity=1.007 Sum_probs=1252.2
Q ss_pred CcccchhhhhHHHHhhCCCcchhhhhhcccCCCCCC-CC-cceeeecccccchhhhHHHHHHhhhcCccCHHHHHHHHHH
Q 000555 30 SLEEDEDELMWAAIARLPSQKQGNFALLKTTTPRNG-GE-AKTETIDVRKLNRSRRELVVSKALATNDQDNYKLLSAIKE 107 (1427)
Q Consensus 30 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (1427)
..|||||+|+|||+|||||++|++++++.+..+.++ +. ....++|+.+++.++|+.++++++++++.|++++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 118 (1470)
T PLN03140 39 SVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRN 118 (1470)
T ss_pred cccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHh
Confidence 356899999999999999999999999864311111 11 0011389999999999999999999999999999999999
Q ss_pred HHhhcCCCCCccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEc
Q 000555 108 RLDRVGIEVPKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLG 187 (1427)
Q Consensus 108 ~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llG 187 (1427)
|.+++|+++|+++|+|+||+|++++.++++.+||+.|.+.+.++......+...+++.+++||+|+|+.++|||+++|+|
T Consensus 119 ~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llG 198 (1470)
T PLN03140 119 RIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLG 198 (1470)
T ss_pred hhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEc
Confidence 99999999999999999999999998899999999999999887665443433344456889999999999999999999
Q ss_pred CCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhh
Q 000555 188 PPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYIN 267 (1427)
Q Consensus 188 p~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 267 (1427)
|||||||||||+|+|+++++.+.+|+|++||+++++...++.++||+|+|.|++++||+|||.|++++++... ..++..
T Consensus 199 pnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~-~~~~~~ 277 (1470)
T PLN03140 199 PPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGT-RYDLLS 277 (1470)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCC-cccchh
Confidence 9999999999999999988767799999999998776667889999999999999999999999999876411 112333
Q ss_pred hhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcE
Q 000555 268 DLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKT 347 (1427)
Q Consensus 268 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~i 347 (1427)
+..+.++++++.|++++|++|++....+.+.+..++++|+.+||++|+||.||++++++|||||||||+||++|+++|++
T Consensus 278 ~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~v 357 (1470)
T PLN03140 278 ELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKT 357 (1470)
T ss_pred hcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcE
Confidence 45566777777888899999998877777677788999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCC
Q 000555 348 LFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLP 427 (1427)
Q Consensus 348 llLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p 427 (1427)
+||||||+|||+.++.++++.|++++++.|+|+|+++|||+++++++||+|++|++|+++|+||++++.+||+++||+||
T Consensus 358 lllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP 437 (1470)
T PLN03140 358 LFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCP 437 (1470)
T ss_pred EEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999998877999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhccCCCCCCCCCCCcccCCCcccCHHHH
Q 000555 428 PRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLSVPYDKSKCHPSALSKTRYAVSKWEL 507 (1427)
Q Consensus 428 ~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~ 507 (1427)
+++++|||+++++++++++++|.....|+.+.++++++++|++++.++.+..+++.|.++...++.....++|..++|+|
T Consensus 438 ~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q 517 (1470)
T PLN03140 438 ERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMEL 517 (1470)
T ss_pred CCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHH
Confidence 99999999999999988878887666677778899999999999988888777776666555555555567799999999
Q ss_pred HHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhh
Q 000555 508 FRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLSCLFFAVVHMMFNGFSELPIMITRLP 587 (1427)
Q Consensus 508 ~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~ 587 (1427)
++.|++|++++++||+..++.++++.+++|+++|++|++++.+..+..+++.+.|++||+++..+++++++++.++.+||
T Consensus 518 ~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~ 597 (1470)
T PLN03140 518 LKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999987665545567888999999999999999999999999999
Q ss_pred HHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Q 000555 588 VFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDM 667 (1427)
Q Consensus 588 vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~ 667 (1427)
+|+|||+.+||++|+|++++++.++|+.++++++|++|+|||+|+.+++++||.|+++++++++++.+++++++++++++
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccCccccccc-ccccccccceecccccC
Q 000555 668 VVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAARWKKKSV-IGDNTIGYNVLHTHSLP 746 (1427)
Q Consensus 668 ~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~-~~~~~~G~~~l~~~~~~ 746 (1427)
.+|+.++++.++++++++||+++.++||+||+|++|+||+.|+++++++|||.+.+|.+... ....+.|.++|..+++.
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~ 757 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVF 757 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHHHhcCcC
Confidence 99999999999999999999999999999999999999999999999999999988864321 22456899999999999
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhh--h--------h--h---hc----c-c-
Q 000555 747 SGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMA--K--------Q--Q---FE----I-N- 805 (1427)
Q Consensus 747 ~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~--------~--~---~~----~-~- 805 (1427)
....|+|++++++++++++|++++++++++.++.......+.++........ . . . .. . .
T Consensus 758 ~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1470)
T PLN03140 758 TDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPE 837 (1470)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccccccccccccccccc
Confidence 8889999999999999999999999999998865554433322110000000 0 0 0 00 0 0
Q ss_pred c-----CC----CCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCC
Q 000555 806 T-----TS----APESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGA 876 (1427)
Q Consensus 806 ~-----~~----~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGa 876 (1427)
. .. .....+.+++..|+.|..++|+||+|.++.+...+..+...+++++|+|||++++|||++||||||||
T Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGa 917 (1470)
T PLN03140 838 GLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGA 917 (1470)
T ss_pred ccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCC
Confidence 0 00 00112234556788899999999999999887665555555667899999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHH
Q 000555 877 GKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEE 956 (1427)
Q Consensus 877 GKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~ 956 (1427)
||||||++|+|+.++|.++|+|.+||.+.....+++.+|||+|+|.++|.+||+|+|.|++.++.+...+.+++.+.+++
T Consensus 918 GKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~ 997 (1470)
T PLN03140 918 GKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDE 997 (1470)
T ss_pred CHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 99999999999987777899999999987655567789999999999999999999999998887766667777788999
Q ss_pred HHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000555 957 VMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1036 (1427)
Q Consensus 957 ~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1036 (1427)
+++.++|.+++|+.+|.+++++|||||||||+||++|+.+|+||||||||||||+.++..+++.|++++++|+|||||+|
T Consensus 998 vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~H 1077 (1470)
T PLN03140 998 VMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1077 (1470)
T ss_pred HHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 99999999999999998888899999999999999999999999999999999999999999999999988999999999
Q ss_pred CCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCCCCCCCCCchhhHHhhcccchhhcccccHHHHHhc
Q 000555 1037 QPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIPSIPSGYNPATWMLEVTTAATEEKLGVDFADVYRS 1116 (1427)
Q Consensus 1037 ~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~ 1116 (1427)
||+.++++.||++++|++||+++|.||.+.+++++++||++++|.++||+++|||||++|+++.+.+.+.+.||++.|++
T Consensus 1078 q~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~ 1157 (1470)
T PLN03140 1078 QPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKS 1157 (1470)
T ss_pred CCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHHHHHhc
Confidence 99977899999999999889999999999888999999999988878999999999999999877666666799999999
Q ss_pred cHHHHHHHHHhhhcCCCCCCCCCCCCCCccCCChHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000555 1117 SEQYRVVESSIKNLSVPPPGSEPLKFSSTYSQDPLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSK 1196 (1427)
Q Consensus 1117 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~ 1196 (1427)
|++++++++.++++..++++.++..++++|++|+|+|++.|+||+++++||||.|+.+|+++++++|+++|++||+++++
T Consensus 1158 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~ 1237 (1470)
T PLN03140 1158 SSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTK 1237 (1470)
T ss_pred cHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999988888877776666555556778999999999999999999999999999999999999999999999999987
Q ss_pred CCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 000555 1197 RSSTQGLFMVMGALYASCLFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFM 1276 (1427)
Q Consensus 1197 ~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~ 1276 (1427)
..+.+++++++|++|++++|+++.++++++|.+..||+||+|||++|+|++++|++|++++|+|+.++++++|++|+|||
T Consensus 1238 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m 1317 (1470)
T PLN03140 1238 RSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAM 1317 (1470)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHH
Q 000555 1277 INFERTARKFFLFLVFMFLTFSYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAW 1356 (1427)
Q Consensus 1277 ~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y 1356 (1427)
+||++++.+||||+++++++.++++++|+++++++||.++|+.+++++++++++||||++|+++||+||+|+||+||++|
T Consensus 1318 ~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y 1397 (1470)
T PLN03140 1318 VAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAW 1397 (1470)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCccccccCC--CCCCHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000555 1357 TLRGIVSSQLGDVETMIVEPT--FRGTVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFLNFQKR 1427 (1427)
Q Consensus 1357 ~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1427 (1427)
+++|+++|||+|.+..|.++| ...++++|++++|||+++++|++++++++|+++|++++++++|++|||||
T Consensus 1398 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1398 TVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999988776665 23679999999999999999999999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.7e-183 Score=1842.70 Aligned_cols=1274 Identities=32% Similarity=0.529 Sum_probs=1054.9
Q ss_pred cCHHHHHHHHHHHHhhcCCCCC--ccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCe
Q 000555 96 QDNYKLLSAIKERLDRVGIEVP--KVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDV 173 (1427)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 173 (1427)
.|++++++.+.++.++.+...| +++|+|+||+|++. ..+....||+.|.+.+.......... ..+++++++||+|+
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566666654455555555555 99999999999993 34455689998887776553332221 12334567899999
Q ss_pred eEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-CCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCCHHHHHH
Q 000555 174 SGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS-LKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELTVRETFD 250 (1427)
Q Consensus 174 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1427)
|+.++|||+++|+||||||||||||+|+|+.++. .+.+|+|.+||+++++. ..++.++||+|+|.|++++||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 9999999999999999999999999999997432 23699999999987543 23567999999999999999999999
Q ss_pred HHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChH
Q 000555 251 FAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGG 330 (1427)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 330 (1427)
|+++++.+.... ....+.++ .+...+.+++.+||++++||.+|++.+++||||
T Consensus 161 f~~~~~~~~~~~----~~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 161 FAARCKTPQNRP----DGVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHhCCCCCCC----CCCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 998876431000 00001110 011246789999999999999999999999999
Q ss_pred HhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEec
Q 000555 331 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQG 410 (1427)
Q Consensus 331 qkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G 410 (1427)
|||||+||++|+.+|+|+||||||+|||+.++.++++.|++++++.|+|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987678999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhccCCCCCC--
Q 000555 411 PRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLSVPYDKS-- 488 (1427)
Q Consensus 411 ~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~-- 488 (1427)
+++++.+||+++||+||++.++|||+.+++++.++ +.+...+ .....+.+++++.|++++.++.+..+++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYE-KKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccccc-ccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999887543 2221111 1123568899999999987766655543221110
Q ss_pred -------------CCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCcc
Q 000555 489 -------------KCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEK 555 (1427)
Q Consensus 489 -------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~ 555 (1427)
.........++|..++|+|++.|++|+++.++||+..+..++++.+++|+++|++|++.+.+ ..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TS 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---ch
Confidence 00011223456889999999999999999999999999999999999999999999977643 34
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCc
Q 000555 556 NGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPE 635 (1427)
Q Consensus 556 ~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~ 635 (1427)
+.+.+.|++||++++.++.++.+++.++.+|++|+|||.+++|++++|++++++.++|+.++.+++|++|+|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 56788999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHH
Q 000555 636 TGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAIS 715 (1427)
Q Consensus 636 ~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~ 715 (1427)
+++||.+++++++...++.++++++++++++...|+.++++.++++++++||+++.++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCcccccc--ccc----------------------ccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHH
Q 000555 716 VNEFAAARWKKKS--VIG----------------------DNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVT 771 (1427)
Q Consensus 716 ~nef~~~~~~~~~--~~~----------------------~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~ 771 (1427)
.|||.+..+.|.. +.+ ..+.|.++|.. ++.....|.|.++++++++.++|.++.+
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999998887741 000 11355667764 3344556899999999999999999999
Q ss_pred HHHHhcCcCCCccccccchh--h-hhHHh-h---------hhhhccccCCCCCCCCc-cCcc-cC--CCCceEEEeeeee
Q 000555 772 LALAYLNPLRKSQVVIDDKE--E-NSVKM-A---------KQQFEINTTSAPESGKK-KGMI-LP--FQPLAMTFHNVNY 834 (1427)
Q Consensus 772 l~l~~~~~~~~~~~~~~~~~--~-~~~~~-~---------~~~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~~v~~ 834 (1427)
+++++.++............ . ..... . ++.........+...+. .... .| .....++|+||+|
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~ 767 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTY 767 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEE
Confidence 99999875443321111000 0 00000 0 00000000000000000 0000 01 1123579999998
Q ss_pred EEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCccCCcccccce
Q 000555 835 YVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARI 913 (1427)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~ 913 (1427)
.++.+ .+++.+|+|||++++|||++||+|||||||||||++|+|+.++| +.+|+|.+||.+... .+++.
T Consensus 768 ~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~ 837 (1394)
T TIGR00956 768 EVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRS 837 (1394)
T ss_pred EecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcc
Confidence 87421 23467999999999999999999999999999999999987644 456999999998753 46788
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000555 914 SGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVEL 993 (1427)
Q Consensus 914 ~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL 993 (1427)
+|||+|+|.+++.+||+|++.|++.++.+...++++++++++++++.++|.+++|+.+|.++. +||||||||++||+||
T Consensus 838 i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 838 IGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVEL 916 (1394)
T ss_pred eeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHH
Confidence 999999999999999999999999988776667777788899999999999999999986543 8999999999999999
Q ss_pred hhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHH
Q 000555 994 VANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMI 1072 (1427)
Q Consensus 994 ~~~p~-illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~ 1072 (1427)
+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+.+..+++++
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~ 996 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTII 996 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHH
Confidence 99997 99999999999999999999999999888999999999999767889999999998889999999998888999
Q ss_pred HHHHhcCCCCCCCCCCCchhhHHhhcccchhhcccccHHHHHhccHHHHHHHHHhhhcCCCCCCC---CCCCCCCccCCC
Q 000555 1073 DYFQALDGIPSIPSGYNPATWMLEVTTAATEEKLGVDFADVYRSSEQYRVVESSIKNLSVPPPGS---EPLKFSSTYSQD 1149 (1427)
Q Consensus 1073 ~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1149 (1427)
+||+++ |.++||+++|||||+||+++.+.+.+...|+++.|++|+++++..+.++++..+.... ......++|+.|
T Consensus 997 ~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 1075 (1394)
T TIGR00956 997 NYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAAS 1075 (1394)
T ss_pred HHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCC
Confidence 999998 4457999999999999999875544445689999999998887766655543321111 111122468999
Q ss_pred hHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHH
Q 000555 1150 PLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASCLFLGVNNASSVQPIV 1229 (1427)
Q Consensus 1150 ~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~ 1229 (1427)
+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ +++++++++|++|+++++.++. ++.++|.+
T Consensus 1076 ~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f 1151 (1394)
T TIGR00956 1076 LWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPF 1151 (1394)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhH
Confidence 9999999999999999999999999999999999999999999986 5789999999999988887776 44566778
Q ss_pred HHhhHHH-HHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHH-------HHHHHHHHHHHHHHHH
Q 000555 1230 SIERTVF-YREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARK-------FFLFLVFMFLTFSYFT 1301 (1427)
Q Consensus 1230 ~~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~~~~~~~ 1301 (1427)
..||.+| +||+++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.. |++|+++++++.++++
T Consensus 1152 ~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 1231 (1394)
T TIGR00956 1152 VAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFS 1231 (1394)
T ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHH
Confidence 7888875 8999999999999999999999999999999999999999999988766 9999999999999999
Q ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCcccccc------
Q 000555 1302 FYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVETMIVE------ 1375 (1427)
Q Consensus 1302 ~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~------ 1375 (1427)
++|+++++++|+.++|+.+++++++++++||||++|+++||.||+|++|+||++|+++|++.|||+|.+..|..
T Consensus 1232 s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f 1311 (1394)
T TIGR00956 1232 TLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTF 1311 (1394)
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCcccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999998865531
Q ss_pred -CCCCC--------------------------------CHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 000555 1376 -PTFRG--------------------------------TVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFL 1422 (1427)
Q Consensus 1376 -~~~~~--------------------------------~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1422 (1427)
|+.+. ++.+|+ ..+|+++++.|+|++++++|++++ +++++++.+.
T Consensus 1312 ~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l-~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1312 NPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFL-EPISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred cCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHH-HHcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 11112 344554 457999999999999999999988 8888888775
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.9e-95 Score=917.93 Aligned_cols=584 Identities=25% Similarity=0.410 Sum_probs=487.2
Q ss_pred CCceEEEeeeeeEEeCccch----------------hccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhc
Q 000555 823 QPLAMTFHNVNYYVDMPQAM----------------RSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLA 886 (1427)
Q Consensus 823 ~~~~~~~~~v~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~ 886 (1427)
.+..++|.|++|+++..... ++.....+++++|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 46789999999998754210 00111223567999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc
Q 000555 887 GRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL 966 (1427)
Q Consensus 887 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~ 966 (1427)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+...+++++.++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876444689999999986532 345689999999999999999999999888766555666777889999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Q 000555 967 RDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1046 (1427)
Q Consensus 967 ~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~ 1046 (1427)
+|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred ceEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCCCCCCCCCchhhHHhhcccchhh------cc---cccHHHHHhcc
Q 000555 1047 DELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIPSIPSGYNPATWMLEVTTAATEE------KL---GVDFADVYRSS 1117 (1427)
Q Consensus 1047 D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~~~~------~~---~~~~~~~~~~s 1117 (1427)
|++++|++ |+++|.|+. +++.+||+++| .+||+++|||||++|+++...+. .. .....+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G--~~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG--FSPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC--CCCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 689999986 68999999996 47999999999999998753210 00 01223445421
Q ss_pred HHHHHHHHHhhh--cCC-CCC-----CCCCCC-CCCccCCChHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHH
Q 000555 1118 EQYRVVESSIKN--LSV-PPP-----GSEPLK-FSSTYSQDPLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGS 1188 (1427)
Q Consensus 1118 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1188 (1427)
. .++..+.++. ... +.. ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 000 000 001000 11235678999999999999998 99999999999999999999999
Q ss_pred HhcCCCCCCCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 000555 1189 VFWDIGSKRSSTQGLFMVMGALYASCLFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTII 1268 (1427)
Q Consensus 1189 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~ 1268 (1427)
+||+++ ..+++++.|++||+++++++.+++++++.++.||+||+||+++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 468999999999999999998888899999999999999999999999999999999999999999999
Q ss_pred HHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHh
Q 000555 1269 FGFITFFMINFERTARKFFLFLVFMFLTFSYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWF 1348 (1427)
Q Consensus 1269 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1348 (1427)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++|+||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHhhCCCcc-----ccccCC-CCCCHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 000555 1349 YYISPVAWTLRGIVSSQLGDVET-----MIVEPT-FRGTVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFL 1422 (1427)
Q Consensus 1349 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1422 (1427)
+|+||++|++++++.|||++.+. .|..+. .......++. ..+++....|.++++|++|+++|++++|++|+++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 342111 0111112222 2344455789999999999999999999999998
Q ss_pred cc
Q 000555 1423 NF 1424 (1427)
Q Consensus 1423 ~~ 1424 (1427)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.8e-95 Score=908.98 Aligned_cols=579 Identities=32% Similarity=0.570 Sum_probs=505.8
Q ss_pred CCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEEC
Q 000555 823 QPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKIS 901 (1427)
Q Consensus 823 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 901 (1427)
.+..++|+|+++..+.+.. ..+++|+|||++++|||++|||||||||||||||+|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999987754321 3578999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 902 GYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 902 g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
|++.+...+++.+|||.|+|.++|++||+|+|.|++.+|+|...+.++++++|+++++.+||.+++|+++|+++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 599999
Q ss_pred cCCCCCchhHHHHHHhcCCCCCCCCCCCchhhHHhhcccc--hhhccc----ccHHHHHh-ccHHHHHHHHHhhhcCCCC
Q 000555 1062 GKLGVHSKTMIDYFQALDGIPSIPSGYNPATWMLEVTTAA--TEEKLG----VDFADVYR-SSEQYRVVESSIKNLSVPP 1134 (1427)
Q Consensus 1062 g~~~~~~~~~~~yf~~~~g~~~~~~~~npad~~l~v~~~~--~~~~~~----~~~~~~~~-~s~~~~~~~~~~~~~~~~~ 1134 (1427)
|+. +++.+||+++| ++||+++|||||++|+++.. .+.... ....+.++ .+...+......+.+...
T Consensus 253 G~~----~~~~~ff~~~G--~~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSLG--FPCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred cCH----HHHHHHHHhCC--CCCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 997 78999999996 46999999999999999842 111000 00111111 111111100000111111
Q ss_pred CCCCCCCCCCccCCChHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHH
Q 000555 1135 PGSEPLKFSSTYSQDPLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASC 1214 (1427)
Q Consensus 1135 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1214 (1427)
++ .+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.+
T Consensus 326 ---~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 326 ---KK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred ---cc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 11 111127899999999999999999999999999999999999999999999975 4667789999999999
Q ss_pred HHhHHHHHhhhhHHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHH
Q 000555 1215 LFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKFFLFLVFMF 1294 (1427)
Q Consensus 1215 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1294 (1427)
.++.+..+...++.++.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCccccc
Q 000555 1295 LTFSYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVETMIV 1374 (1427)
Q Consensus 1295 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1374 (1427)
+..+.++++|++++++.||...|..++++++..+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997222332
Q ss_pred cCC---CCCCHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000555 1375 EPT---FRGTVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFLNFQK 1426 (1427)
Q Consensus 1375 ~~~---~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1426 (1427)
..+ ...++.+++ ..++++.++.|.++.++++|+++|++++|+++++.-..+
T Consensus 558 ~~~~~~~~~~~~~~l-~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 558 LSGNLCCESTGEDVL-KQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred cCcCCcccccHHHHH-HhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 111 113455555 568999999999999999999999999999999865443
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-94 Score=915.88 Aligned_cols=567 Identities=31% Similarity=0.501 Sum_probs=501.8
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCccCCcccccceEEEEccCCCCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVT 928 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 928 (1427)
+++++|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986543 358999999998766667888999999999999999
Q ss_pred HHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000555 929 VEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPG-SSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1427)
Q Consensus 929 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqrl~ia~aL~~~p~illlDEPTs 1007 (1427)
|+||+.|++.++.+...+.+++.+.++++++.++|.+++|+.+|+++ .++||||||||++||+||+.+|++++|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999887777777888899999999999999999999764 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCCCCCCC
Q 000555 1008 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIPSIPSG 1087 (1427)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~ 1087 (1427)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|.||. +++.+||+++| .+||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCC
Confidence 99999999999999999888999999999998889999999999985 799999997 67899999996 479999
Q ss_pred CCchhhHHhhcccchhhc-----ccccHHHHHhccHHHHHHHHHhhhcCCCCCC---CCCCCCCCccCCChHHHHHHHHH
Q 000555 1088 YNPATWMLEVTTAATEEK-----LGVDFADVYRSSEQYRVVESSIKNLSVPPPG---SEPLKFSSTYSQDPLSQFFICFW 1159 (1427)
Q Consensus 1088 ~npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~ 1159 (1427)
.|||||++|+++.+.+.+ ...++.+.|++|+.+++..+..+....+.++ .......++|..++++|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 999999999987543221 1135667777777666554433321111111 11111224678999999999999
Q ss_pred HHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHHHHhhHHHHHH
Q 000555 1160 KQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASCLFLGVNNASSVQPIVSIERTVFYRE 1239 (1427)
Q Consensus 1160 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE 1239 (1427)
|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.+++.+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999985 57899999999999999999988888889999999999999
Q ss_pred hhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHH
Q 000555 1240 KAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKFFLFLVFMFLTFSYFTFYGMMAVGLTPNQHLAAV 1319 (1427)
Q Consensus 1240 ~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1319 (1427)
+++|+|++++|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCcc-ccccCCC----CCCHHHHHHhhcCCCC
Q 000555 1320 ISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVET-MIVEPTF----RGTVKEYLEESLGFGP 1394 (1427)
Q Consensus 1320 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~g~~~ 1394 (1427)
++++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|...+. +.++ +++++.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g-~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSG-EVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcCh-HHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999998764 4421111 1234 66777899999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000555 1395 GMVGVSAAVLVAFSLLFFGSFAFSVKFLNFQKR 1427 (1427)
Q Consensus 1395 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1427 (1427)
++.|.+++++++|+++|++++|++|++-...+|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999998766665
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1e-91 Score=950.38 Aligned_cols=564 Identities=25% Similarity=0.425 Sum_probs=496.5
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--ceeEEEEEECCccCCc--ccccceEEEEccCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--GYIEGDIKISGYPKEQ--STFARISGYVEQNDIHSP 925 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~ 925 (1427)
+++++|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.++|
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 457799999999999999999999999999999999998532 2468999999987643 235567999999999999
Q ss_pred CCCHHHHHHHHHhccCCc----CCCHHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000555 926 QVTVEESLWFSANLRLSK----EVSKNQRHE-FVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSII 1000 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~il 1000 (1427)
.+||+|++.|++.++.+. ..+.+++.+ .++++++.+||++++|+.+|+...++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998887643 233444433 357789999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHHHHHHhcC
Q 000555 1001 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMIDYFQALD 1079 (1427)
Q Consensus 1001 llDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~ 1079 (1427)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|.|+. +++.+||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999874 999999999998889999999999986 689999986 68999999996
Q ss_pred CCCCCCCCCCchhhHHhhcccchh-------h---cccccHHHHHhccHHHHHHHHHhhhcCCC--C-------------
Q 000555 1080 GIPSIPSGYNPATWMLEVTTAATE-------E---KLGVDFADVYRSSEQYRVVESSIKNLSVP--P------------- 1134 (1427)
Q Consensus 1080 g~~~~~~~~npad~~l~v~~~~~~-------~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--~------------- 1134 (1427)
.+||+++|||||++|+++++.+ . +...++++.|++|+.+++..+.+++.... .
T Consensus 307 --~~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 --FKCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred --CCCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4799999999999999886431 1 12357999999999887766555432111 0
Q ss_pred CCCCCCCCCCccCCChHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHH
Q 000555 1135 PGSEPLKFSSTYSQDPLSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASC 1214 (1427)
Q Consensus 1135 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1214 (1427)
..++.....+.|..|+|+|+++|++|+++.+||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122234688999999999999999999999999999999999999999999999986 4679999999999999
Q ss_pred HHhHHHHHhhhhHHHHHhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHH
Q 000555 1215 LFLGVNNASSVQPIVSIERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKFFLFLVFMF 1294 (1427)
Q Consensus 1215 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1294 (1427)
++.++.++..+ +.+..||+||+||+.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 44567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCccccc
Q 000555 1295 LTFSYFTFYGMMAVGLTPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVETMIV 1374 (1427)
Q Consensus 1295 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1374 (1427)
++.++++++|+++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777663
Q ss_pred c------------------------CCCC-CCHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000555 1375 E------------------------PTFR-GTVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFLNF 1424 (1427)
Q Consensus 1375 ~------------------------~~~~-~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1424 (1427)
. ||.. +++.+|+...|||++++.|+|++|+++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1111 467899988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.2e-90 Score=934.37 Aligned_cols=593 Identities=23% Similarity=0.395 Sum_probs=500.5
Q ss_pred CCceEEEeeeeeEEeC-------ccc----------hhc-cC---CCcccceeccceeeEEeCCeEEEEEcCCCCChhHH
Q 000555 823 QPLAMTFHNVNYYVDM-------PQA----------MRS-QG---IPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTL 881 (1427)
Q Consensus 823 ~~~~~~~~~v~~~~~~-------~~~----------~~~-~~---~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTL 881 (1427)
+.+.++|+|+++..+. |.. ... .+ .++.++++|+|||+.++|||+++|+||||||||||
T Consensus 128 ~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTL 207 (1470)
T PLN03140 128 PTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTL 207 (1470)
T ss_pred CCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHH
Confidence 3567899999876652 110 000 01 12235779999999999999999999999999999
Q ss_pred HhhhcCCCCC-ceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCc-------CCCHHHH---
Q 000555 882 MDVLAGRKTG-GYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSK-------EVSKNQR--- 950 (1427)
Q Consensus 882 l~~L~g~~~~-~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-------~~~~~~~--- 950 (1427)
|++|+|+.++ ...+|+|.+||++..+...++.++||+|+|.|+|.+||+|+|.|++.++.+. +.+.+++
T Consensus 208 Lk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~ 287 (1470)
T PLN03140 208 LLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAG 287 (1470)
T ss_pred HHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhcc
Confidence 9999998653 2458999999998755444678999999999999999999999998776321 1111111
Q ss_pred ---------------------HHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 951 ---------------------HEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 951 ---------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
...++++++.+||++++|+.+|+...++|||||||||+||++|+.+|+++||||||+||
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGL 367 (1470)
T PLN03140 288 IFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGL 367 (1470)
T ss_pred CCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCc
Confidence 12367899999999999999999888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCCCCCCCC
Q 000555 1010 DARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIPSIPSGY 1088 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~~~~~~~ 1088 (1427)
|+.++..+++.|+++++ .|+|||+++|||+.++++.||+|++|++ |+++|.||. +++.+||+++| .+||+++
T Consensus 368 Ds~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG--f~cP~~~ 440 (1470)
T PLN03140 368 DSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG--FKCPERK 440 (1470)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC--CCCCCCC
Confidence 99999999999999986 5899999999998889999999999986 799999986 78999999996 4799999
Q ss_pred CchhhHHhhcccchh-h-----------cccccHHHHHhccHHHHHHHHHhhhcCCCCCCCCCCCCCCccCCChHHHHHH
Q 000555 1089 NPATWMLEVTTAATE-E-----------KLGVDFADVYRSSEQYRVVESSIKNLSVPPPGSEPLKFSSTYSQDPLSQFFI 1156 (1427)
Q Consensus 1089 npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~ 1156 (1427)
|||||++|+++.... . ....++++.|++|+.+++..+.++........++.....++|..+++.|++.
T Consensus 441 n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~ 520 (1470)
T PLN03140 441 GTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKA 520 (1470)
T ss_pred ChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHH
Confidence 999999999986432 1 1234689999999887776554432111111111111234689999999999
Q ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHHHHhhHHH
Q 000555 1157 CFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASCLFLGVNNASSVQPIVSIERTVF 1236 (1427)
Q Consensus 1157 l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~ 1236 (1427)
|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+...|++||++++++++++.. ++.+..||+||
T Consensus 521 ~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~vf 599 (1470)
T PLN03140 521 CWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPVF 599 (1470)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchh
Confidence 99999999999999999999999999999999999998654445566788899999999988876654 57778899999
Q ss_pred HHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHH
Q 000555 1237 YREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKFFLFLVFMFLTFSYFTFYGMMAVGLTPNQHL 1316 (1427)
Q Consensus 1237 ~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~ 1316 (1427)
+|||++++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+..+
T Consensus 600 ~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~ 679 (1470)
T PLN03140 600 YKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMII 679 (1470)
T ss_pred HHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCccc-cccCCCC-CCHHHHHHhhcCCCC
Q 000555 1317 AAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVETM-IVEPTFR-GTVKEYLEESLGFGP 1394 (1427)
Q Consensus 1317 A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~g~~~ 1394 (1427)
|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|+++|||.+.... +.+.+.. +++.+|+ +.+||..
T Consensus 680 A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~~ 758 (1470)
T PLN03140 680 ANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVFT 758 (1470)
T ss_pred HHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcCc
Confidence 99999999999999999999999999999999999999999999999999775532 1122222 4455555 7899975
Q ss_pred C--ChhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000555 1395 G--MVGVSAAVLVAFSLLFFGSFAFSVKFLNF 1424 (1427)
Q Consensus 1395 ~--~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1424 (1427)
+ +.|+++++|++|+++|+++++++|++++.
T Consensus 759 ~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~ 790 (1470)
T PLN03140 759 DKNWYWIGVGALLGFTILFNVLFTLALTYLNP 790 (1470)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 5 56999999999999999999999999873
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-84 Score=809.97 Aligned_cols=566 Identities=27% Similarity=0.475 Sum_probs=503.3
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCccCCcccccceEEEEccCCCCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVT 928 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lT 928 (1427)
.+.++|+|+|+-++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 4567999999999999999999999999999999999975432 235799999998766444788999999999999999
Q ss_pred HHHHHHHHHhccCCcC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000555 929 VEESLWFSANLRLSKE----VSKNQRH-EFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1427)
Q Consensus 929 v~e~l~~~~~l~~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlD 1003 (1427)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++++||+||+...+|+||||||||++|.+++.+++++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998743 2222222 2577999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCCCchhHHHHHHhcCCCC
Q 000555 1004 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGVHSKTMIDYFQALDGIP 1082 (1427)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~~~~~~~~yf~~~~g~~ 1082 (1427)
|+|+|||+.|+.++.+.||++++ .+.|+++++|||+.+++++||+|++|.+ |+++|.||. +++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G--f 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG--F 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC--c
Confidence 99999999999999999999986 4889999999999999999999999997 699999997 78999999996 4
Q ss_pred CCCCCCCchhhHHhhcccchhh-----------ccc-ccHHHHHhccHHHHHHHHHhhhcCCCCCCCCCCCCCCccCCCh
Q 000555 1083 SIPSGYNPATWMLEVTTAATEE-----------KLG-VDFADVYRSSEQYRVVESSIKNLSVPPPGSEPLKFSSTYSQDP 1150 (1427)
Q Consensus 1083 ~~~~~~npad~~l~v~~~~~~~-----------~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1150 (1427)
.||+..++|||+.++++...+. ... .++++.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 7999999999999999832211 111 5799999999998887655443222222333334456899999
Q ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHhHHHHHHHHhHHHHHhhhhHHHH
Q 000555 1151 LSQFFICFWKQNLIYWRSPQYNAVRLAFTVAAALILGSVFWDIGSKRSSTQGLFMVMGALYASCLFLGVNNASSVQPIVS 1230 (1427)
Q Consensus 1151 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1230 (1427)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..++++..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 5677899999999999999998887776 4455
Q ss_pred HhhHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000555 1231 IERTVFYREKAAGMYSPIPYAVAQGLVEMPYVFVQTIIFGFITFFMINFERTARKFFLFLVFMFLTFSYFTFYGMMAVGL 1310 (1427)
Q Consensus 1231 ~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1310 (1427)
+.||||+|||...+|++++|.++.++.++|+.++.+++|.+|+||++||.+++++||.++++++++..++.+++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCchhHhHHhhhhCHHHHHHHHHHHHhhCCCcccccc---------------
Q 000555 1311 TPNQHLAAVISSAFYSLWNLQSGFLIPRPSIPGWWIWFYYISPVAWTLRGIVSSQLGDVETMIVE--------------- 1375 (1427)
Q Consensus 1311 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~--------------- 1375 (1427)
+++...|+.++++.+.+..+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|.+
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998887751
Q ss_pred ------CCCC-CCHHHHHHhhcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000555 1376 ------PTFR-GTVKEYLEESLGFGPGMVGVSAAVLVAFSLLFFGSFAFSVKFLNFQ 1425 (1427)
Q Consensus 1376 ------~~~~-~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1425 (1427)
+|.. +.+.+|++..|+|++.|.|++++|++||.++|.++..+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1111 3467888888999999999999999999999999999999999854
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.2e-79 Score=762.92 Aligned_cols=585 Identities=30% Similarity=0.528 Sum_probs=488.8
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHH
Q 000555 116 VPKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKST 195 (1427)
Q Consensus 116 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 195 (1427)
...++++|+|+++++... .+ ..+++|+|||++++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 456789999999886431 11 4578999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHh
Q 000555 196 LLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKE 275 (1427)
Q Consensus 196 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1427)
||++|+|+...+...+|+|++||++.+....++.+|||.|+|.+++++||+|++.|+++++.+.. +.+.+
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~--------~~~~~-- 141 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS--------LSKEE-- 141 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC--------CCHHH--
Confidence 99999999987667899999999888777888999999999999999999999999999986521 11222
Q ss_pred hcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCC
Q 000555 276 RNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEIST 355 (1427)
Q Consensus 276 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPts 355 (1427)
.+.+++++++.|||.+|+||.+|+...|||||||||||+||..|+.+|.||+||||||
T Consensus 142 ----------------------k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTS 199 (613)
T KOG0061|consen 142 ----------------------KRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTS 199 (613)
T ss_pred ----------------------HHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCC
Confidence 2346899999999999999999999889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHH
Q 000555 356 GLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADF 435 (1427)
Q Consensus 356 gLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~ 435 (1427)
|||+.++.++++.|+++|++ |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||++.|++||+..||+||
T Consensus 200 GLDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf 278 (613)
T KOG0061|consen 200 GLDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADF 278 (613)
T ss_pred CcchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHH
Confidence 99999999999999999987 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccchhccccCCCCCCcCCCHHHHHHHHH-hChhhHhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHH
Q 000555 436 LQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFK-DSRFGKALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAR 514 (1427)
Q Consensus 436 l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 514 (1427)
+.++.+..++.+..... .......+.++ .....+... ........ ..........++|.|+..+++|
T Consensus 279 ~l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 279 LLDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLE-ALEKSLST-----SKKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHH-HHhhhccc-----ccccccccCCcHHHHHHHHHHH
Confidence 99987743110000000 00000001110 000000000 00000000 0000111167899999999999
Q ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHHHHHHHHHHHHHHHhh-hHHHHhhhhhHHHHhh
Q 000555 515 EILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLSCLFFAVVHMMFNGFS-ELPIMITRLPVFYKQR 593 (1427)
Q Consensus 515 ~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~rqr 593 (1427)
.+..+.|++.+...|..+.+++++++|.+|++.+... .....+.|++||.+..+.+..+. .++.+.+++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDA---KGIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCch---HHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999874332 34447788888888887666655 6899999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Q 000555 594 DNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTF 673 (1427)
Q Consensus 594 ~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~ 673 (1427)
.+++|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.++.++..+++.++..+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccCccccccc--ccccccccceecccccCCCCcc
Q 000555 674 ASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAARWKKKSV--IGDNTIGYNVLHTHSLPSGDYW 751 (1427)
Q Consensus 674 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~l~~~~~~~~~~~ 751 (1427)
++...+.+++++||+++.+.+|+||+|+.|+|+..|+++++..|+|.+....|... ......|..+++..++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999998622222211 1233466677777776543 4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCc
Q 000555 752 YWIGVGALLLYSLLFNSVVTLALAYLNP 779 (1427)
Q Consensus 752 ~w~~~g~ll~~~~~f~~l~~l~l~~~~~ 779 (1427)
.|.++.+++++.++|.+++++++++...
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~~ 609 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRVK 609 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6899999999999999999999988643
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.9e-77 Score=757.72 Aligned_cols=609 Identities=22% Similarity=0.375 Sum_probs=473.3
Q ss_pred CCccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHH
Q 000555 116 VPKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKST 195 (1427)
Q Consensus 116 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 195 (1427)
.+.++++|+|+++.+.......+.. .+...+.......+.. .+..++++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~~~~~~~~l~-~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGS----NIKRILGHKPKISDET-RQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccc----cccccccccccccccc-ccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 4689999999999875431111110 0111111000000000 1112467999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHh
Q 000555 196 LLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKE 275 (1427)
Q Consensus 196 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1427)
||++|+|+++++ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+.. ..+.+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~--------~~~~~-- 177 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS--------LTKQE-- 177 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC--------CCHHH--
Confidence 999999998764 3589999999987542 34569999999999999999999999876543210 00000
Q ss_pred hcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCC
Q 000555 276 RNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEIST 355 (1427)
Q Consensus 276 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPts 355 (1427)
...+++++++.+||+++.||.+|++..++|||||||||+||++|+.+|+|++|||||+
T Consensus 178 ----------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPts 235 (659)
T PLN03211 178 ----------------------KILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTS 235 (659)
T ss_pred ----------------------HHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCC
Confidence 1124678999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHH
Q 000555 356 GLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADF 435 (1427)
Q Consensus 356 gLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~ 435 (1427)
|||+.++.++++.|+++++ .|+|||+++|||..+++++||+|++|++|+++|+|+.+++.+||+++|++||++.|||||
T Consensus 236 gLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf 314 (659)
T PLN03211 236 GLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADF 314 (659)
T ss_pred CcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHH
Confidence 9999999999999999976 589999999999888999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhccC---CCCCCC-----CCCC-cccCCCcccCHHH
Q 000555 436 LQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLSV---PYDKSK-----CHPS-ALSKTRYAVSKWE 506 (1427)
Q Consensus 436 l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~~~~s~~~ 506 (1427)
+.++++...+.+.......+ ...+.+.+.|++... +........ ...... .... ......+..++|.
T Consensus 315 ~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (659)
T PLN03211 315 LLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFN 390 (659)
T ss_pred HHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHH
Confidence 99998754321100000111 112233344432111 111111000 000000 0000 0011234568999
Q ss_pred HHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHHHHHHHHHHHHH-HHhhhHHHHhhh
Q 000555 507 LFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLSCLFFAVVHMMF-NGFSELPIMITR 585 (1427)
Q Consensus 507 ~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~~~~~~~~ 585 (1427)
|+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+.+.|++||++++.++ +.+..++.+..+
T Consensus 391 Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~e 464 (659)
T PLN03211 391 QFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQE 464 (659)
T ss_pred HHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887 78888888999999999999999999753 24567889999999877554 556888999999
Q ss_pred hhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000555 586 LPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIAR 665 (1427)
Q Consensus 586 ~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~ 665 (1427)
|++|+|||.+++|++++|++++++.++|+.++.+++|++++|||+|+.+++++|+.|++++++...++.+++.+++++++
T Consensus 465 r~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~ 544 (659)
T PLN03211 465 RAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIM 544 (659)
T ss_pred hHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccCcc-----ccccccccccccccee
Q 000555 666 DMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAARW-----KKKSVIGDNTIGYNVL 740 (1427)
Q Consensus 666 ~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~l 740 (1427)
+...|+.++++..+++++|+||+++ +||+||+|++|+||+.|++++++.|||.+.+- .|.........++.++
T Consensus 545 ~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~ 622 (659)
T PLN03211 545 DAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFV 622 (659)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccc
Confidence 9999999999999999999999996 79999999999999999999999999976442 2321111111222233
Q ss_pred cccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcC
Q 000555 741 HTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLN 778 (1427)
Q Consensus 741 ~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~ 778 (1427)
....+. ....|.++++++++.++|.+++++++++.+
T Consensus 623 ~~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 623 EEDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 322222 234788999999999999999999997654
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.5e-78 Score=766.47 Aligned_cols=570 Identities=25% Similarity=0.437 Sum_probs=481.7
Q ss_pred ccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCC
Q 000555 163 KRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 163 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~ 242 (1427)
++.++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.+|||+|+|.++++
T Consensus 34 ~~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 34 ERPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred ccCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCcc
Confidence 34467899999999999999999999999999999999999877545689999999998765667889999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+|||.|+++++.+.. ..+.+ .+.+++++++.+||++++||.+|+.
T Consensus 114 lTV~e~l~f~~~~~~~~~--------~~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~ 161 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRR--------VTKKE------------------------KRERVDEVLQALGLRKCANTRIGVP 161 (617)
T ss_pred CcHHHHHHHHHhcCCCCC--------CCHHH------------------------HHHHHHHHHHHcCchhcCcCccCCC
Confidence 999999999988764310 00111 1124788999999999999999986
Q ss_pred c-CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 323 M-IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 323 ~-~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
. .++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .|+|+|+++|||+.+++++||++++|
T Consensus 162 ~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll 240 (617)
T TIGR00955 162 GRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILM 240 (617)
T ss_pred CCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEe
Confidence 4 789999999999999999999999999999999999999999999999976 49999999999999999999999999
Q ss_pred eCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhc
Q 000555 402 SEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSL 481 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l 481 (1427)
++|+++|+|+++++.+||+++|++||+..+++||+.++++....... ......+++.+.++.++..++.....
T Consensus 241 ~~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~ 313 (617)
T TIGR00955 241 AEGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNT 313 (617)
T ss_pred eCCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHh
Confidence 99999999999999999999999999999999999998764322110 00112345556666555444433322
Q ss_pred cCCCCCCC---CCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchh
Q 000555 482 SVPYDKSK---CHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGN 558 (1427)
Q Consensus 482 ~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~ 558 (1427)
........ ..........+..++|.|+..+++|.++..+||+..+..+.++.+++++++|++|++.+.+ ..+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~ 390 (617)
T TIGR00955 314 NLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQ 390 (617)
T ss_pred hhhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHH
Confidence 21111000 0001112345678999999999999999999999999999999999999999999976543 34566
Q ss_pred hHHHHHHHHHHHHHHHHh-hhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchh
Q 000555 559 LYLSCLFFAVVHMMFNGF-SELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETG 637 (1427)
Q Consensus 559 ~~~g~lff~~~~~~~~~~-~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~ 637 (1427)
...|++|+.++.++|..+ ..++.+..++++|+||+.+++|++++|++++.+.++|..++.+++|.+++|||+|+.+++.
T Consensus 391 ~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~ 470 (617)
T TIGR00955 391 NINGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGAT 470 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHH
Confidence 778999999888877764 5577888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHH
Q 000555 638 RFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVN 717 (1427)
Q Consensus 638 ~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~n 717 (1427)
+|+.+++++++...++.++++++++++++...|..+++..++++++++||+++.+++|+||+|++|+||+.|++++++.|
T Consensus 471 ~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~n 550 (617)
T TIGR00955 471 HFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLIN 550 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCcc-ccccccc---ccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhc
Q 000555 718 EFAAARW-KKKSVIG---DNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYL 777 (1427)
Q Consensus 718 ef~~~~~-~~~~~~~---~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~ 777 (1427)
||.+..+ .|..... ....|.++++.+++... +.|.++++++++.++|.+++++++++.
T Consensus 551 ef~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 551 QWSDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred HhCCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988765 3322111 12357788888888654 459999999999999999999999874
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-75 Score=732.71 Aligned_cols=763 Identities=23% Similarity=0.308 Sum_probs=420.9
Q ss_pred hccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEE
Q 000555 156 GLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAY 232 (1427)
Q Consensus 156 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~y 232 (1427)
++++.++.+++.+||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|.++|.++.+++ +++++|.
T Consensus 355 nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~igl 431 (1228)
T KOG0055|consen 355 NVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGL 431 (1228)
T ss_pred EEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCe
Confidence 4445567777889999999999999999999999999999999999999986 999999999998764 4689999
Q ss_pred EccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc
Q 000555 233 ISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD 312 (1427)
Q Consensus 233 v~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~ 312 (1427)
|+|+|.+| ..||+|||.|+... ... +++.+..|.+ ...+. ...|+
T Consensus 432 V~QePvlF-~~tI~eNI~~G~~d-----at~---~~i~~a~k~a-----------------------na~~f---i~~lp 476 (1228)
T KOG0055|consen 432 VSQEPVLF-ATTIRENIRYGKPD-----ATR---EEIEEAAKAA-----------------------NAHDF---ILKLP 476 (1228)
T ss_pred eeechhhh-cccHHHHHhcCCCc-----ccH---HHHHHHHHHc-----------------------cHHHH---HHhhH
Confidence 99999665 56999999996210 111 1111111110 01122 23477
Q ss_pred cccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHH
Q 000555 313 LCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETF 392 (1427)
Q Consensus 313 ~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~ 392 (1427)
+..||.+|++++. |||||||||+|||||+.+|+|||||||||+||++++..+.+.|++..+ |+|.|+..|.. .+.
T Consensus 477 ~g~~T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVaHRL--StI 551 (1228)
T KOG0055|consen 477 DGYDTLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVAHRL--STI 551 (1228)
T ss_pred HhhcccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEeeeh--hhh
Confidence 8899999999885 999999999999999999999999999999999999999999998754 56655544443 456
Q ss_pred hhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCCh-HHHH--HHhcCccchhccccCCCCCCcCCCHHHHHHHHH
Q 000555 393 DLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGV-ADFL--QEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFK 469 (1427)
Q Consensus 393 ~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~-ad~l--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1427)
+.+|+|++|++|+|++.|+++|+... . +. ++.. |+....++. ..... + ..++.....+
T Consensus 552 rnaD~I~v~~~G~IvE~G~h~ELi~~----------~-G~Y~~lv~~Q~~~~~~~~-~~~~~-~------~~~~~~~s~~ 612 (1228)
T KOG0055|consen 552 RNADKIAVMEEGKIVEQGTHDELIAL----------G-GIYSSLVRLQELEKAAED-EEEEE-S------LKEERSRSLK 612 (1228)
T ss_pred hccCEEEEEECCEEEEecCHHHHHhc----------c-chHHHHHHHHhhhhhhhc-ccccc-c------hhhhhhhccc
Confidence 67999999999999999999999862 1 11 1211 111111110 00000 0 0000000000
Q ss_pred hChhhHhHhhh-----c--cCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH-------H
Q 000555 470 DSRFGKALKSS-----L--SVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVA-------F 535 (1427)
Q Consensus 470 ~s~~~~~~~~~-----l--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~-------~ 535 (1427)
.+......... . ..+.+.....+. .......++|+.++.+ +.++.+.+.-.+..+ +
T Consensus 613 ~s~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~~i~k~~--------~pe~~~l~lG~i~a~i~G~~~P~ 682 (1228)
T KOG0055|consen 613 SSSSSPSLSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFWRIFKLN--------KPEWPYLLLGSLGAAIRGATYPL 682 (1228)
T ss_pred cccccccccCCcccccccccccccccccccc--ccccccccHHHHHHhc--------cchhHHHHHHHHHHHHhhhhHHH
Confidence 00000000000 0 000000000000 1111334455554432 233333332222222 2
Q ss_pred HHHHHHHHhcccC-CCCCCccchhhHHHHHHHHHH----------HHHHHHhhhHHHHhhhhhHH---HHhhcCCCcchH
Q 000555 536 VGFVACTMFLRTR-LHPTDEKNGNLYLSCLFFAVV----------HMMFNGFSELPIMITRLPVF---YKQRDNYFHPAW 601 (1427)
Q Consensus 536 ~~li~gt~f~~~~-~~~~~~~~~~~~~g~lff~~~----------~~~~~~~~~~~~~~~~~~vf---~rqr~~~~y~~~ 601 (1427)
.+++++.++--.- .+++........++.+|.++. +.+|.-.++....-.|..+| .+|-..+|..+-
T Consensus 683 fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ 762 (1228)
T KOG0055|consen 683 FAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPE 762 (1228)
T ss_pred HHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCc
Confidence 3333333321111 111111111112333333221 11222223332222333333 222222232211
Q ss_pred -HHHHHHHH-HHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 000555 602 -AWSVASWI-LRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLL 679 (1427)
Q Consensus 602 -ay~la~~l-~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l 679 (1427)
+-.+..-+ .+.+ .+.+++- .-...+...++++.-.+.+|..++|-+.+
T Consensus 763 nsg~l~~RLa~Da~--~vr~~v~----------------------------~rl~~vv~~~~~~~~~iiiaf~~~W~lal 812 (1228)
T KOG0055|consen 763 NSGALSSRLATDAS--NVRAAVG----------------------------DRLSLVVQNIAAVIIGIIIAFIYGWRLAL 812 (1228)
T ss_pred cchHHHHHHhcchH--HHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 1111 0111100 00111111222222222233333222222
Q ss_pred HHHH------HhhccccC-------CCchhHHH---H-----HHHHcHHHHHHHHHHHHhhccCcccccccccccccccc
Q 000555 680 IVFL------MGGFIIPK-------ESIKPWWS---W-----AYWVSPLSYAQSAISVNEFAAARWKKKSVIGDNTIGYN 738 (1427)
Q Consensus 680 ~~~l------~~Gf~i~~-------~~ip~~~~---W-----~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~ 738 (1427)
+.+. ++++.-.. +....+-. - -.+-.--.+..+.-..+.|..
T Consensus 813 v~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~----------------- 875 (1228)
T KOG0055|consen 813 VVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKE----------------- 875 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHH-----------------
Confidence 1111 11110000 00000000 0 000000000000111111100
Q ss_pred eecccccCCCCccchhhHHHHHHHHHHHHH---HHHHHHHhcCcCCCcc-ccc-----------------cchhhh--hH
Q 000555 739 VLHTHSLPSGDYWYWIGVGALLLYSLLFNS---VVTLALAYLNPLRKSQ-VVI-----------------DDKEEN--SV 795 (1427)
Q Consensus 739 ~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~---l~~l~l~~~~~~~~~~-~~~-----------------~~~~~~--~~ 795 (1427)
.++...-.......|.+++..+...+.|.. .++........-.... ..+ ....+. ..
T Consensus 876 ~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~ 955 (1228)
T KOG0055|consen 876 ELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAK 955 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHH
Confidence 000000000011234444444444433322 1122211111100000 000 000000 00
Q ss_pred HhhhhhhccccCCC-CCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCC
Q 000555 796 KMAKQQFEINTTSA-PESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSS 874 (1427)
Q Consensus 796 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~s 874 (1427)
..+......-+..+ -+.....+...+.-...|+|+||+|+|+.. ++.+||+|+|++|++|+.+||||||
T Consensus 956 ~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~S 1025 (1228)
T KOG0055|consen 956 IAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPS 1025 (1228)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCC
Confidence 00000000000111 011111222334445579999999999754 3578999999999999999999999
Q ss_pred CCChhHHHhhhcCCCCCceeEEEEEECCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHH
Q 000555 875 GAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRH 951 (1427)
Q Consensus 875 GaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~ 951 (1427)
||||||.+.+|-+..+ +..|.|.|||.+++. ..+|+++|.|.|+|.+|. .|++||+.|+. .+.+.++.
T Consensus 1026 GsGKSTvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~eI- 1096 (1228)
T KOG0055|consen 1026 GSGKSTVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEEI- 1096 (1228)
T ss_pred CCCHHHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHHH-
Confidence 9999999999988655 468999999998765 457889999999999985 69999999981 12344432
Q ss_pred HHHHHHHHH-------cCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000555 952 EFVEEVMRL-------VELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1024 (1427)
Q Consensus 952 ~~v~~~l~~-------l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~ 1024 (1427)
.+.++. .+|.+-.||.+|..|. +||||||||++|||||++||+||||||+||+||+++.+.|+++|.+.
T Consensus 1097 ---i~Aak~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a 1172 (1228)
T KOG0055|consen 1097 ---IEAAKLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA 1172 (1228)
T ss_pred ---HHHHHHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh
Confidence 233332 3677888999997765 69999999999999999999999999999999999999999999886
Q ss_pred HhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1025 VDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1025 ~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
. .|||.|+++|++| +++.+|.|.|+++ |++++.|..
T Consensus 1173 ~-~gRT~IvIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1173 M-EGRTTIVIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred h-cCCcEEEEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 4 5899999999976 5788999999985 799999975
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-73 Score=734.31 Aligned_cols=738 Identities=21% Similarity=0.301 Sum_probs=423.3
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 244 (1427)
...+.|+|||++|++|+++||+||.||||||||.+|.|+++. .+|+|.++| .++||||++|. .+.|
T Consensus 532 ~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~---~sG~v~v~g----------siaYv~Q~pWI-~ngT 597 (1381)
T KOG0054|consen 532 SPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK---LSGSVAVNG----------SVAYVPQQPWI-QNGT 597 (1381)
T ss_pred CCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc---ccceEEEcC----------eEEEeccccHh-hCCc
Confidence 344599999999999999999999999999999999999985 599999999 58999999954 5679
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCC-------cccccc
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGL-------DLCSET 317 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~~t 317 (1427)
|||||.|+..+. +++++++++.|+| +.+..|
T Consensus 598 vreNILFG~~~d------------------------------------------~~rY~~Vi~aC~L~~Dle~Lp~GD~T 635 (1381)
T KOG0054|consen 598 VRENILFGSPYD------------------------------------------EERYDKVIKACALKKDLEILPFGDLT 635 (1381)
T ss_pred HHHhhhcCcccc------------------------------------------HHHHHHHHHHccCHhHHhhcCCCCcc
Confidence 999999974331 1234555555555 356789
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHH-HHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIV-KCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~-~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
.||++++ +|||||||||++|||+++++||++||+|.|++|+++..+|+ ++++.+.+ +||+|+++|| -+..+.+|
T Consensus 636 eIGErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~--~KT~ILVTHq--l~~L~~ad 710 (1381)
T KOG0054|consen 636 EIGERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLR--GKTVILVTHQ--LQFLPHAD 710 (1381)
T ss_pred eecCCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhc--CCEEEEEeCc--hhhhhhCC
Confidence 9999998 59999999999999999999999999999999999999999 58877764 7999998886 47899999
Q ss_pred cEEEEeCCeEEEecChHHHHH---HHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChh
Q 000555 397 DLLLLSEGHLVYQGPRAEVLE---FFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRF 473 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (1427)
.|++|++|+|+.+|+++|+.+ .|+++ +.+....++..........+.. ....+. +..+..
T Consensus 711 ~Iivl~~G~I~~~Gty~el~~~~~~~~~l-------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-- 773 (1381)
T KOG0054|consen 711 QIIVLKDGKIVESGTYEELLKSGGDFAEL-------------AHEEESEQEEEASEKDLESGES-SRESES-RSLESL-- 773 (1381)
T ss_pred EEEEecCCeEecccCHHHHHhcchhHHHH-------------hhccchhhcccccccccccccc-ccchhh-hhhhhh--
Confidence 999999999999999999984 23322 0000000000000000000000 000000 000000
Q ss_pred hHhHhhhccCCCCCCC-CCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHH--HHHHHH-HHHHHHHHHhcccCC
Q 000555 474 GKALKSSLSVPYDKSK-CHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIF--RTCQVA-FVGFVACTMFLRTRL 549 (1427)
Q Consensus 474 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~--~~~~~~-~~~li~gt~f~~~~~ 549 (1427)
+...+. ....+.. ...........+.-.|..++.+++-. ..+.... -+.+.. .+..+....|+..+.
T Consensus 774 -~~~~~~--~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~------~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~ 844 (1381)
T KOG0054|consen 774 -SSEEEK--SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAA------GGFLLVLLILLLFVLTQVLQIASNYWLSYWT 844 (1381)
T ss_pred -cccccc--cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000000 0000000 00000011123344556665554420 1111111 111111 122333444554444
Q ss_pred CCCCc-----cchhhHHHHHH-HHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 000555 550 HPTDE-----KNGNLYLSCLF-FAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWS 623 (1427)
Q Consensus 550 ~~~~~-----~~~~~~~g~lf-f~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~ 623 (1427)
+.... .+...|+++.. +++...++..+..+..+..- -+.--.+.-.++..++.+
T Consensus 845 ~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~--------------------l~aS~~Lh~~ml~~Ilra 904 (1381)
T KOG0054|consen 845 DDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGG--------------------LKASRKLHDKLLNSILRA 904 (1381)
T ss_pred CCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHhC
Confidence 33211 12222322211 11111111111111111000 001111223333444444
Q ss_pred HHHhhc-cCcCCchhHHHHHHHHH-----HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhH
Q 000555 624 CVVYFT-VGFAPETGRFFRHMFLL-----FSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPW 697 (1427)
Q Consensus 624 ~ivY~~-~gl~~~~~~F~~~~l~l-----~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~ 697 (1427)
.+.+|- +...+-..||-..+-.+ +........+..+++.+. .++...-.+.+.+..+
T Consensus 905 pm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~---vi~~~~P~fli~~~pl-------------- 967 (1381)
T KOG0054|consen 905 PMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV---VISYVTPWFLIAIIPL-------------- 967 (1381)
T ss_pred cchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH---HhhHHhHHHHHHHHHH--------------
Confidence 433332 11222233443332211 111111111111111111 1111110111111111
Q ss_pred HHHHHHHcHHHHHHHHHHHHhhccCcccc-cccccccccccceecccccC--------------------CCCccchh--
Q 000555 698 WSWAYWVSPLSYAQSAISVNEFAAARWKK-KSVIGDNTIGYNVLHTHSLP--------------------SGDYWYWI-- 754 (1427)
Q Consensus 698 ~~W~~~isp~~y~~~al~~nef~~~~~~~-~~~~~~~~~G~~~l~~~~~~--------------------~~~~~~w~-- 754 (1427)
.++||.-...|...+..+....+..-.. .........|...+++++.. ......|.
T Consensus 968 -~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~ 1046 (1381)
T KOG0054|consen 968 -GVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAV 1046 (1381)
T ss_pred -HHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 1122222223333333333322211000 00000111111111111100 00000122
Q ss_pred ----------------------------hHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhhcccc
Q 000555 755 ----------------------------GVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQFEINT 806 (1427)
Q Consensus 755 ----------------------------~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 (1427)
.+|+.+.|++.++....++++....+++....+++..++.....+.....+.
T Consensus 1047 Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~ 1126 (1381)
T KOG0054|consen 1047 RLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEE 1126 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcC
Confidence 2455555556666666666666666666555555544443211110011111
Q ss_pred CCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhc
Q 000555 807 TSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLA 886 (1427)
Q Consensus 807 ~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~ 886 (1427)
..+|++||..| .|+|+|++.+|. ++...+|||||++|+|||++||||++|||||||+++|.
T Consensus 1127 ~~pp~~WP~~G--------~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLF 1187 (1381)
T KOG0054|consen 1127 SRPPPSWPSKG--------EIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALF 1187 (1381)
T ss_pred CCCCCCCCCCC--------eEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHH
Confidence 11344555544 689999986653 22346899999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEECCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCC
Q 000555 887 GRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVEL 963 (1427)
Q Consensus 887 g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L 963 (1427)
+..++ .+|+|.|||.++.+ ..+|++++.+||||.+|. -|||+||. +..+.++++ +.++|+..+|
T Consensus 1188 Rl~e~--~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NLD------Pf~e~sD~~----IW~ALe~~~L 1254 (1381)
T KOG0054|consen 1188 RLVEP--AEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNLD------PFDEYSDDE----IWEALERCQL 1254 (1381)
T ss_pred HhcCc--cCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-CccccccC------cccccCHHH----HHHHHHHhCh
Confidence 98763 57999999999866 457889999999999986 49999874 223444444 5556666655
Q ss_pred ccc-------ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000555 964 DSL-------RDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1036 (1427)
Q Consensus 964 ~~~-------~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1036 (1427)
.+. .|+.+. +++.++|.||||.+|+||||+++++||+|||+|+++|++|+..|+++||+..+ +||||+++|
T Consensus 1255 k~~v~~~p~~Ld~~v~-egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAH 1332 (1381)
T KOG0054|consen 1255 KDVVSSLPGGLDSEVS-EGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAH 1332 (1381)
T ss_pred HHHHhhCCcCCCceec-CCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEee
Confidence 433 444554 45678999999999999999999999999999999999999999999999875 799999999
Q ss_pred CCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1037 QPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1037 ~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+.+ ....+|||+||++ |+++++|++
T Consensus 1333 Rl~--TVmd~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1333 RLN--TVMDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred ccc--hhhhcCeEEEeeC-CeEeecCCh
Confidence 976 4556799999997 567766665
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.8e-69 Score=722.77 Aligned_cols=224 Identities=25% Similarity=0.380 Sum_probs=192.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4789999876631 135699999999999999999999999999999999998653 589999999886
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+.+|..++ .|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHH
Confidence 42 2345679999999999999999999998776642 3344455678899999999998888874 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++...|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999985 67788999999986 68888887
Q ss_pred CCCCchhHHHHHH
Q 000555 1064 LGVHSKTMIDYFQ 1076 (1427)
Q Consensus 1064 ~~~~~~~~~~yf~ 1076 (1427)
. +++..-|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 55655553
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7e-68 Score=724.69 Aligned_cols=211 Identities=24% Similarity=0.285 Sum_probs=176.2
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..|+|+||+++|+. +..++|+|||++|+|||++||+||||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 36999999988741 224699999999999999999999999999999999998663 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-------SLRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 974 (1427)
+.+ ..+|+++++|||++.+|+. |++|||.+.. +.+++ .+.++++..++. .-.|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~tde----ei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHNDA----DLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCCHH----HHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 4578899999999999875 9999996531 22333 355666666553 3457777753
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||+||||||+++|+||+||||||+||++|++.|++.|++.. +++|||+++|+++ ....+|+|+||++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999975 5667999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|++
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 678888875
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.7e-67 Score=714.61 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=175.9
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+++|+. +.+++|+|+|++|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 36999999998831 23468999999999999999999999999999999999866 357999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
+.+ ..+|++++||||++.+|+. |++|||.+. .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~------~~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPF------SEHNDA----DLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCC------CCCCHH----HHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 4578899999999999875 999999643 123333 3566666666543 356777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4899999999975 5667999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|++
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 678887875
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-65 Score=609.68 Aligned_cols=474 Identities=26% Similarity=0.343 Sum_probs=364.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-CCceeEEEECCeecCccc-------ccceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS-LKKSGNITYNGYKLDEFH-------VQRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~ 238 (1427)
.++++||||++.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++.... ..+.++|++|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 346899999998764321 2367999999973
Q ss_pred --CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 239 --HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 239 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
+-|-+||.+-|.-..+..+.. .+ .+...++.++|+.+||++...
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~----------~~------------------------~ea~~~a~elL~~Vgl~~~~~ 147 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKG----------SR------------------------AEARKRAVELLEQVGLPDPER 147 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccc----------cH------------------------HHHHHHHHHHHHHcCCCChhh
Confidence 567789988887665544310 00 011234678999999987544
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
. +++++.|||||||||.||+||+.+|++|++|||||+||+.++.+|++.|+++.++.|.++|++ +|...-+.++||
T Consensus 148 ~---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~I-THDl~Vva~~aD 223 (539)
T COG1123 148 R---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFI-THDLGVVAELAD 223 (539)
T ss_pred h---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEE-cCCHHHHHHhcC
Confidence 3 678999999999999999999999999999999999999999999999999999999999985 677788899999
Q ss_pred cEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHh
Q 000555 397 DLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKA 476 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (1427)
+|+||++|++++.|+.+++... | ..||. +.
T Consensus 224 rv~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT-----------------~~ 253 (539)
T COG1123 224 RVVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYT-----------------RG 253 (539)
T ss_pred eEEEEECCEEEEecCHHHHHhc--------c-------------------------CCccc-----------------HH
Confidence 9999999999999999998641 0 01110 00
Q ss_pred HhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccc
Q 000555 477 LKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKN 556 (1427)
Q Consensus 477 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~ 556 (1427)
+... .|. .....
T Consensus 254 Ll~a--~p~---------------------------------------------------------------~~~~~--- 265 (539)
T COG1123 254 LLAA--VPR---------------------------------------------------------------LGDEK--- 265 (539)
T ss_pred HHhh--CCC---------------------------------------------------------------ccccc---
Confidence 0000 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCch
Q 000555 557 GNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPET 636 (1427)
Q Consensus 557 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~ 636 (1427)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000555 637 GRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISV 716 (1427)
Q Consensus 637 ~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 716 (1427)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHH
Q 000555 717 NEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVK 796 (1427)
Q Consensus 717 nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~ 796 (1427)
..+..
T Consensus 266 -----~~~~~---------------------------------------------------------------------- 270 (539)
T COG1123 266 -----IIRLP---------------------------------------------------------------------- 270 (539)
T ss_pred -----ccccc----------------------------------------------------------------------
Confidence 00000
Q ss_pred hhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCC
Q 000555 797 MAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGA 876 (1427)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGa 876 (1427)
..... + ...-++.+|++..+..+..+. ....+...+++||||.+++||++||+|+|||
T Consensus 271 ---------~~~~~----------~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVGeSGs 328 (539)
T COG1123 271 ---------RRGPL----------R-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVGESGS 328 (539)
T ss_pred ---------ccccc----------c-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEECCCCC
Confidence 00000 0 011367888876665433211 0112346789999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCceeEEEEEECCccC--C---cccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHH
Q 000555 877 GKTTLMDVLAGRKTGGYIEGDIKISGYPK--E---QSTFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQ 949 (1427)
Q Consensus 877 GKSTLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~ 949 (1427)
|||||.++|+|...+ ..|.|.++|.+. + ....++.+-+++||+ .+.|.+||++.+.-...... .....+
T Consensus 329 GKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~--~~~~~~ 404 (539)
T COG1123 329 GKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHG--GGSGAE 404 (539)
T ss_pred CHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhc--ccchHH
Confidence 999999999998764 579999999762 1 123456777888876 67899999999987654432 223566
Q ss_pred HHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-
Q 000555 950 RHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT- 1027 (1427)
Q Consensus 950 ~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~- 1027 (1427)
+++++.++++.++|.. ..+.. +.+||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++.++
T Consensus 405 ~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~ 479 (539)
T COG1123 405 RRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL 479 (539)
T ss_pred HHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh
Confidence 7778999999999985 34444 3689999999999999999999999999999999999999999999999765
Q ss_pred CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1028 GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1028 g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|.|.|+++||.. -+...||||+||.+ |+++..||.
T Consensus 480 g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 480 GLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred CCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999986 37778999999986 688888875
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2e-65 Score=694.13 Aligned_cols=217 Identities=21% Similarity=0.335 Sum_probs=178.3
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc------------
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG------------ 892 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~------------ 892 (1427)
..|+|+||+|+|+.. ++.++|+|+|++|+||+.+||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999988531 1346999999999999999999999999999999999965531
Q ss_pred ----------------------------------------eeEEEEEECCccCCc---ccccceEEEEccCCCCCCCCCH
Q 000555 893 ----------------------------------------YIEGDIKISGYPKEQ---STFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 893 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
+.+|+|.+||.++.+ ..+|+.+|||+|++.+| +.|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 147999999998754 45788999999999988 4799
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCC-------cccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVEL-------DSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFM 1002 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illl 1002 (1427)
+|||.|+. .+.++++ ++++++..++ .+-.||.+|.. +..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~ee----I~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATRED----VKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCHHH----HHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 1233333 5555555544 44568889854 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhhceEEEEecC---cE-EEEccCC
Q 000555 1003 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLMKRG---GR-VIYGGKL 1064 (1427)
Q Consensus 1003 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g---g~-~~~~g~~ 1064 (1427)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+.
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999974 57789999999972 45 5577874
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.4e-64 Score=691.86 Aligned_cols=211 Identities=20% Similarity=0.233 Sum_probs=176.5
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+++|+. +...+|+|||++|+|||++||+||||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 46999999998852 12359999999999999999999999999999999999866 357999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
+.+ ..+|+.++||||++.+|+. |++|||... .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~------~~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPF------SQYSDE----EVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCcc------cCCCHH----HHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 4578899999999999975 999999521 123333 3566777766643 357777753
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||+||||||+++|+||+||||||+||++++..|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4799999999975 5677999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|++
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 688888875
No 21
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.1e-63 Score=680.05 Aligned_cols=211 Identities=24% Similarity=0.268 Sum_probs=176.9
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..|+|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999998742 23459999999999999999999999999999999999876 357999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
+.. ..+|+.+|||||++.+|+. |++|||... .+.++ +.+.++++..++.+ -.|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~------~~~sd----eeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF------LEASS----AEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc------cCCCH----HHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 4578899999999999875 999999531 12333 34667777777654 357777753
Q ss_pred CCCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 975 GSSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~-p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+.+||||||||+||||||+++ |+||+||||||+||+.+++.|++.|++.. +++|||+|+|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 467999999999999999996 89999999999999999999999999875 4799999999964 677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 688888875
No 22
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3e-63 Score=678.80 Aligned_cols=210 Identities=22% Similarity=0.285 Sum_probs=176.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..|+|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|..+ .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999998852 23569999999999999999999999999999999999864 47999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
+.. ..+|+.++||||++.+|+. |+||||... ...++ +.+.++++..+|.+ -.|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~------~~~td----eei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY------EQWSD----EEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc------cCCCH----HHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 764 4578899999999999975 999999532 12233 34667788777643 35677775
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
++.+||||||||+||||||+++|+||+||||||+||+.++..|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 446799999999999999999999999999999999999999999999875 4799999999974 5677999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 577777764
No 23
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-63 Score=630.01 Aligned_cols=490 Identities=21% Similarity=0.256 Sum_probs=354.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc-------------c---cc-cce
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE-------------F---HV-QRT 229 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~-------------~---~~-~~~ 229 (1427)
.++|+||||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|..++. . .. ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999875 8999999874411 0 11 246
Q ss_pred EEEEccCC--CCCCCCCHHHHHHHHHHhc-CCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHH
Q 000555 230 SAYISQTD--NHIPELTVRETFDFAARWQ-GANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVL 306 (1427)
Q Consensus 230 ~~yv~Q~~--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 306 (1427)
+|||+|++ .+++.+||+||+.++.+.. +.. +. +...++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~~l 150 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-----------RE------------------------EAMVEAKRML 150 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHH
Confidence 99999987 5788899999999976532 110 00 0112367789
Q ss_pred HHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecC
Q 000555 307 KVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQ 386 (1427)
Q Consensus 307 ~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q 386 (1427)
+.+||++-. ..-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.++.|+|||++ +|
T Consensus 151 ~~~gL~~~~--~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~i-tH 227 (623)
T PRK10261 151 DQVRIPEAQ--TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFI-TH 227 (623)
T ss_pred HHCCCCChh--hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEE-cC
Confidence 999996310 123455678999999999999999999999999999999999999999999999977668899885 56
Q ss_pred CchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHH
Q 000555 387 PPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAK 466 (1427)
Q Consensus 387 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (1427)
....+.++||+|++|++|++++.|+++++.. .|.+....+++.
T Consensus 228 dl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~----------------------------- 270 (623)
T PRK10261 228 DMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLA----------------------------- 270 (623)
T ss_pred CHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhh-----------------------------
Confidence 6778889999999999999999999876531 000000000000
Q ss_pred HHHhChhhHhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcc
Q 000555 467 AFKDSRFGKALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLR 546 (1427)
Q Consensus 467 ~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~ 546 (1427)
. .+
T Consensus 271 ~---------------~~-------------------------------------------------------------- 273 (623)
T PRK10261 271 A---------------VP-------------------------------------------------------------- 273 (623)
T ss_pred c---------------cC--------------------------------------------------------------
Confidence 0 00
Q ss_pred cCCCCCCccchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000555 547 TRLHPTDEKNGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVV 626 (1427)
Q Consensus 547 ~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~iv 626 (1427)
.... ..+ . ..+
T Consensus 274 -~~~~--~~~-~--------------------------~~~--------------------------------------- 284 (623)
T PRK10261 274 -QLGA--MKG-L--------------------------DYP--------------------------------------- 284 (623)
T ss_pred -cccc--ccc-c--------------------------cCC---------------------------------------
Confidence 0000 000 0 000
Q ss_pred hhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcH
Q 000555 627 YFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSP 706 (1427)
Q Consensus 627 Y~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp 706 (1427)
...+.
T Consensus 285 -----------------------------------------------------------------~~~~~---------- 289 (623)
T PRK10261 285 -----------------------------------------------------------------RRFPL---------- 289 (623)
T ss_pred -----------------------------------------------------------------ccccc----------
Confidence 00000
Q ss_pred HHHHHHHHHHHhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCcccc
Q 000555 707 LSYAQSAISVNEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVV 786 (1427)
Q Consensus 707 ~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~ 786 (1427)
... .. . ....
T Consensus 290 -------------~~~--~~-~--------------------------------------------------~~~~---- 299 (623)
T PRK10261 290 -------------ISL--EH-P--------------------------------------------------AKQE---- 299 (623)
T ss_pred -------------ccc--cc-c--------------------------------------------------cccC----
Confidence 000 00 0 0000
Q ss_pred ccchhhhhHHhhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCe
Q 000555 787 IDDKEENSVKMAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGV 866 (1427)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 866 (1427)
. ...+...+ .+ . ..++++|+++.++..... .+.....+.+|+||||+|++||
T Consensus 300 ----------~---------~~~~~~~~-~~-----~-~~L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~vs~~i~~Ge 351 (623)
T PRK10261 300 ----------P---------PIEQDTVV-DG-----E-PILQVRNLVTRFPLRSGL--LNRVTREVHAVEKVSFDLWPGE 351 (623)
T ss_pred ----------c---------cccccccc-CC-----C-ceEEEeeeEEEEcCCCcc--ccccCCceEEEeeeEeEEcCCC
Confidence 0 00000000 00 1 137899998776421000 0000012469999999999999
Q ss_pred EEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc------cccceEEEEccCC--CCCCCCCHHHHHHHHHh
Q 000555 867 LTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS------TFARISGYVEQND--IHSPQVTVEESLWFSAN 938 (1427)
Q Consensus 867 ~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~ 938 (1427)
++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++||+|++ .++|.+||.|++.+...
T Consensus 352 ~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~ 429 (623)
T PRK10261 352 TLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLR 429 (623)
T ss_pred EEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHH
Confidence 999999999999999999999865 3579999999865321 2456799999997 58899999999987643
Q ss_pred ccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 000555 939 LRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1017 (1427)
Q Consensus 939 l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i 1017 (1427)
.. .....++..+.+.++++.++|. ...+..+ ..|||||||||+|||||+.+|++|||||||+|||+.++..+
T Consensus 430 ~~--~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i 502 (623)
T PRK10261 430 VH--GLLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQI 502 (623)
T ss_pred Hc--CCCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHH
Confidence 32 1112344556788999999996 4566665 58999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1018 MRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1018 ~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
++.|++++++ |.|||++||+++ .+...+|++++|++ |++++.|+.
T Consensus 503 ~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 503 INLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999765 899999999986 47778999999986 678888875
No 24
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-63 Score=622.38 Aligned_cols=460 Identities=21% Similarity=0.316 Sum_probs=347.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +.+|+|.++|+++.... .++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 36999999999999999999999999999999999998852 24899999999875432 24569999999888899
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++...... +. .... ....+++++++.+||++..+.
T Consensus 97 ~tv~e~l~~~~~~~~~--~~------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~----- 139 (506)
T PRK13549 97 LSVLENIFLGNEITPG--GI------MDYD------------------------AMYLRAQKLLAQLKLDINPAT----- 139 (506)
T ss_pred CcHHHHhhhccccccc--CC------cCHH------------------------HHHHHHHHHHHHcCCCCCccc-----
Confidence 9999999986432100 00 0000 001235778999999755444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.+ .|+|+|++. |...++.++||+|++|+
T Consensus 140 ~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~t-H~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 140 PVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYIS-HKLNEVKAISDTICVIR 217 (506)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CcHHHHHHhcCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999865 488998865 55667888999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|++++.|+.+++.. .+..
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~----------------- 236 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDII----------------- 236 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHH-----------------
Confidence 999998876443200 0000
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
.+ +. + ..
T Consensus 237 ------------------------------~~-----------------------------~~--~--~~---------- 243 (506)
T PRK13549 237 ------------------------------TM-----------------------------MV--G--RE---------- 243 (506)
T ss_pred ------------------------------HH-----------------------------hh--C--cC----------
Confidence 00 00 0 00
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
.
T Consensus 244 ---------------------------------------------------~---------------------------- 244 (506)
T PRK13549 244 ---------------------------------------------------L---------------------------- 244 (506)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
. . .. + .
T Consensus 245 -----~--------------------~--------------------------~~-~--~-------------------- 250 (506)
T PRK13549 245 -----T--------------------A--------------------------LY-P--R-------------------- 250 (506)
T ss_pred -----c--------------------c--------------------------cc-c--c--------------------
Confidence 0 0 00 0 0
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
.. .. . + ...++++|+++.++. .+++++|+|+||+|++||++||+||||||||||+
T Consensus 251 ----~~-~~--~--~------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLl 305 (506)
T PRK13549 251 ----EP-HT--I--G------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELV 305 (506)
T ss_pred ----cc-cC--C--C------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCCCCCCHHHHH
Confidence 00 00 0 0 013678888754421 0124589999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhccCCc--CCCHHHHHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQND---IHSPQVTVEESLWFSANLRLSK--EVSKNQRHEF 953 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~~~--~~~~~~~~~~ 953 (1427)
++|+|...+ +.+|+|.++|.+.... ..++.+||++|++ .+++.+||.||+.+........ ..+.++..+.
T Consensus 306 k~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 384 (506)
T PRK13549 306 QCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKT 384 (506)
T ss_pred HHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHH
Confidence 999997541 1479999999865321 2345689999985 4778999999998753211110 0123334456
Q ss_pred HHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q 000555 954 VEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1032 (1427)
Q Consensus 954 v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 1032 (1427)
++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||
T Consensus 385 ~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi 459 (506)
T PRK13549 385 ILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAII 459 (506)
T ss_pred HHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEE
Confidence 88999999996 4667766 47999999999999999999999999999999999999999999999988899999
Q ss_pred EEecCCCHHHHHhhceEEEEecCcEEEEccCCCC
Q 000555 1033 CTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGV 1066 (1427)
Q Consensus 1033 ~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~ 1066 (1427)
+++|+++ ++.+.||++++|++ |+++..|+..+
T Consensus 460 ~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 460 VISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred EECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 9999986 57788999999986 67888776643
No 25
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-63 Score=621.47 Aligned_cols=458 Identities=21% Similarity=0.311 Sum_probs=344.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999999875 899999999875432 23569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++........+. ..... .+...+++++++.+||++..+.
T Consensus 95 ~tv~e~l~~~~~~~~~~~~~----~~~~~------------------------~~~~~~~~~~l~~~gl~~~~~~----- 141 (510)
T PRK09700 95 LTVLENLYIGRHLTKKVCGV----NIIDW------------------------REMRVRAAMMLLRVGLKVDLDE----- 141 (510)
T ss_pred CcHHHHhhhccccccccccc----cccCH------------------------HHHHHHHHHHHHHcCCCCCccc-----
Confidence 99999998753210000000 00000 0011236778999999765444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+++|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++ +|...++.++||++++|+
T Consensus 142 ~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tiiiv-sHd~~~~~~~~d~v~~l~ 219 (510)
T PRK09700 142 KVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKE-GTAIVYI-SHKLAEIRRICDRYTVMK 219 (510)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEE-eCCHHHHHHhCCEEEEEE
Confidence 45579999999999999999999999999999999999999999999998764 8899886 455677888999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|++++.|+++++.. .+.. +.
T Consensus 220 ~G~i~~~g~~~~~~~---------------~~~~-----------------------------~~--------------- 240 (510)
T PRK09700 220 DGSSVCSGMVSDVSN---------------DDIV-----------------------------RL--------------- 240 (510)
T ss_pred CCEEeeecchhhCCH---------------HHHH-----------------------------HH---------------
Confidence 999998887654310 0000 00
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
+. +. . .
T Consensus 241 -------------------------------------------------------------~~--~~--~-~-------- 246 (510)
T PRK09700 241 -------------------------------------------------------------MV--GR--E-L-------- 246 (510)
T ss_pred -------------------------------------------------------------hc--CC--C-c--------
Confidence 00 00 0 0
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
..
T Consensus 247 ------------------------------------------------------------------------------~~ 248 (510)
T PRK09700 247 ------------------------------------------------------------------------------QN 248 (510)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
... . ... .
T Consensus 249 ~~~--~---------------------------------------------------~~~--------------~----- 256 (510)
T PRK09700 249 RFN--A---------------------------------------------------MKE--------------N----- 256 (510)
T ss_pred ccc--c---------------------------------------------------ccc--------------c-----
Confidence 000 0 000 0
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
...+ . .+..++++|+++.+ ..+|+|+|++|++||+++|+||||||||||+
T Consensus 257 ----~~~~---~--------~~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 306 (510)
T PRK09700 257 ----VSNL---A--------HETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFAGLVGSGRTELM 306 (510)
T ss_pred ----cccC---C--------CCcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEECCCCCCHHHHH
Confidence 0000 0 01136788886421 1379999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccC---CCCCCCCCHHHHHHHHHhcc---CCc--C-CCHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQN---DIHSPQVTVEESLWFSANLR---LSK--E-VSKNQ 949 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~lTv~e~l~~~~~l~---~~~--~-~~~~~ 949 (1427)
++|+|..++ .+|+|.++|.+.... ..++.+|||+|+ ..+++.+||+|++.+....+ ... . .....
T Consensus 307 k~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 384 (510)
T PRK09700 307 NCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVD 384 (510)
T ss_pred HHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHH
Confidence 999997653 579999999865321 234568999998 45788999999998753211 000 0 11222
Q ss_pred HHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Q 000555 950 RHEFVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1028 (1427)
Q Consensus 950 ~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g 1028 (1427)
..+.++++++.+++. +..++.+ ..|||||||||+|||+|+.+|+||||||||+|||+.+...+++.|++++++|
T Consensus 385 ~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g 459 (510)
T PRK09700 385 EQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDG 459 (510)
T ss_pred HHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCC
Confidence 335678999999996 6777776 4799999999999999999999999999999999999999999999998789
Q ss_pred CEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1029 RTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1029 ~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
.|||+++|++. .+.+.+|++++|++ |+++..++.
T Consensus 460 ~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 460 KVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999985 57788999999987 577776654
No 26
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.5e-63 Score=618.28 Aligned_cols=449 Identities=21% Similarity=0.325 Sum_probs=343.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999876 899999999874321 24569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.|+....... + ..... ....+++++++.+||++..+.
T Consensus 94 ~tv~e~l~~~~~~~~~~-~------~~~~~------------------------~~~~~~~~~l~~~~l~~~~~~----- 137 (501)
T PRK10762 94 LTIAENIFLGREFVNRF-G------RIDWK------------------------KMYAEADKLLARLNLRFSSDK----- 137 (501)
T ss_pred CcHHHHhhhcccccccc-C------ccCHH------------------------HHHHHHHHHHHHcCCCCCccC-----
Confidence 99999999864321100 0 00000 001235678999999865444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ .++|+|++. |..+++.++||+|++|+
T Consensus 138 ~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvii~s-Hd~~~~~~~~d~i~~l~ 215 (501)
T PRK10762 138 LVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-QGRGIVYIS-HRLKEIFEICDDVTVFR 215 (501)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEe
Confidence 4456999999999999999999999999999999999999999999999865 488988865 55678889999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|+++..|+.+++.. ++..+.
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (501)
T PRK10762 216 DGQFIAEREVADLTE--------------------------------------------DSLIEM--------------- 236 (501)
T ss_pred CCEEEEecCcCcCCH--------------------------------------------HHHHHH---------------
Confidence 999998775433200 000000
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
+. ...
T Consensus 237 -------------------------------------------------------------~~--~~~------------ 241 (501)
T PRK10762 237 -------------------------------------------------------------MV--GRK------------ 241 (501)
T ss_pred -------------------------------------------------------------hc--CCC------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
.
T Consensus 242 ---------------------------------------------------~---------------------------- 242 (501)
T PRK10762 242 ---------------------------------------------------L---------------------------- 242 (501)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
. . . . . .
T Consensus 243 --~--~--------------------~-----------------------------~--------~--------~----- 248 (501)
T PRK10762 243 --E--D--------------------Q-----------------------------Y--------P--------R----- 248 (501)
T ss_pred --c--c--------------------c-----------------------------c--------c--------c-----
Confidence 0 0 0 0 0 0
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
...+ + .+..++++|++. .+|+|+||+|++||+++|+||||||||||+
T Consensus 249 ----~~~~---~--------~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl 295 (501)
T PRK10762 249 ----LDKA---P--------GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGRTELM 295 (501)
T ss_pred ----cccC---C--------CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCHHHHH
Confidence 0000 0 001367777741 268999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhccCC---cCCCHHHHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQND---IHSPQVTVEESLWFSANLRLS---KEVSKNQRHE 952 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~~---~~~~~~~~~~ 952 (1427)
++|+|... +.+|+|.++|.+.... ..++.+||++|++ .+++.+||.|++.+....... ...+.++..+
T Consensus 296 ~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 373 (501)
T PRK10762 296 KVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQ 373 (501)
T ss_pred HHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHH
Confidence 99999865 3579999999875321 2345699999995 577899999999875311100 0112233345
Q ss_pred HHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q 000555 953 FVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTV 1031 (1427)
Q Consensus 953 ~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tv 1031 (1427)
.++++++.+++. +..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+||
T Consensus 374 ~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tv 448 (501)
T PRK10762 374 AVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSI 448 (501)
T ss_pred HHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEE
Confidence 688999999995 5677766 4799999999999999999999999999999999999999999999998789999
Q ss_pred EEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1032 VCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1032 i~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
|+++|++. .+.+.+|++++|++ |+++..|+..
T Consensus 449 iivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 480 (501)
T PRK10762 449 ILVSSEMP-EVLGMSDRILVMHE-GRISGEFTRE 480 (501)
T ss_pred EEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccc
Confidence 99999986 57788999999986 6788877764
No 27
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.1e-62 Score=617.76 Aligned_cols=466 Identities=24% Similarity=0.328 Sum_probs=347.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCccc------c-cceEEEEccCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEFH------V-QRTSAYISQTD 237 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~------~-~~~~~yv~Q~~ 237 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|. .+.+|+|.++|+++.... . ++.+||++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999852 124899999999875421 1 24799999986
Q ss_pred C--CCCCCCHHHHHHHHHHhc-CCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccc
Q 000555 238 N--HIPELTVRETFDFAARWQ-GANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLC 314 (1427)
Q Consensus 238 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 314 (1427)
. +++.+||+|++.+..... +.. +. ....+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gl~~~ 146 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR-----------RE------------------------AARGEILNCLDRVGIRQA 146 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHCCCCCh
Confidence 4 567789999988653221 110 00 011236778999999641
Q ss_pred cccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhh
Q 000555 315 SETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDL 394 (1427)
Q Consensus 315 ~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~ 394 (1427)
. ..-++.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|++++++.++|||+++ |....+.++
T Consensus 147 ~--~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vt-Hd~~~~~~~ 223 (529)
T PRK15134 147 A--KRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFIT-HNLSIVRKL 223 (529)
T ss_pred H--HHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEc-CcHHHHHHh
Confidence 1 0124456679999999999999999999999999999999999999999999998766688998865 555677889
Q ss_pred cCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhh
Q 000555 395 FDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFG 474 (1427)
Q Consensus 395 ~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 474 (1427)
||+|++|++|++++.|+++++... |. . .
T Consensus 224 ~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~--------~----------- 251 (529)
T PRK15134 224 ADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------H--------P----------- 251 (529)
T ss_pred cCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------C--------H-----------
Confidence 999999999999999987655310 00 0 0
Q ss_pred HhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCc
Q 000555 475 KALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDE 554 (1427)
Q Consensus 475 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~ 554 (1427)
. .+.+ + .
T Consensus 252 ---------------------------------~----~~~~----------------------------~--~------ 258 (529)
T PRK15134 252 ---------------------------------Y----TQKL----------------------------L--N------ 258 (529)
T ss_pred ---------------------------------H----HHHH----------------------------H--H------
Confidence 0 0000 0 0
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCC
Q 000555 555 KNGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAP 634 (1427)
Q Consensus 555 ~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~ 634 (1427)
T Consensus 259 -------------------------------------------------------------------------------- 258 (529)
T PRK15134 259 -------------------------------------------------------------------------------- 258 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHH
Q 000555 635 ETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAI 714 (1427)
Q Consensus 635 ~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 714 (1427)
.
T Consensus 259 ---------------------------~---------------------------------------------------- 259 (529)
T PRK15134 259 ---------------------------S---------------------------------------------------- 259 (529)
T ss_pred ---------------------------h----------------------------------------------------
Confidence 0
Q ss_pred HHHhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhh
Q 000555 715 SVNEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENS 794 (1427)
Q Consensus 715 ~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~ 794 (1427)
.. . . .+
T Consensus 260 -------------~~-~----~-----------------------------------------~~--------------- 265 (529)
T PRK15134 260 -------------EP-S----G-----------------------------------------DP--------------- 265 (529)
T ss_pred -------------Cc-c----c-----------------------------------------cc---------------
Confidence 00 0 0 00
Q ss_pred HHhhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccc-hhccCCCcccceeccceeeEEeCCeEEEEEcC
Q 000555 795 VKMAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQA-MRSQGIPEKKLQLLSNVSGVFSPGVLTALVGS 873 (1427)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~ 873 (1427)
. ..+ .. + .+ .++++|+++.++.... .+ -..+.+.+|+|||++|++||++||+||
T Consensus 266 --~----------~~~--~~--~-----~~-~l~~~~l~~~~~~~~~~~~---~~~~~~~il~~isl~i~~Ge~~~i~G~ 320 (529)
T PRK15134 266 --V----------PLP--EP--A-----SP-LLDVEQLQVAFPIRKGILK---RTVDHNVVVKNISFTLRPGETLGLVGE 320 (529)
T ss_pred --c----------ccC--CC--C-----CC-cccccCcEEEeecCccccc---cccccceeeecceeEEcCCCEEEEECC
Confidence 0 000 00 0 00 2577787766531100 00 000134699999999999999999999
Q ss_pred CCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCC
Q 000555 874 SGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS------TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEV 945 (1427)
Q Consensus 874 sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~ 945 (1427)
||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|++ .+++.+||+|++.+....+.. ..
T Consensus 321 nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~ 396 (529)
T PRK15134 321 SGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TL 396 (529)
T ss_pred CCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc-cC
Confidence 99999999999999763 479999999865321 1345689999996 478889999999886533211 12
Q ss_pred CHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000555 946 SKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1024 (1427)
Q Consensus 946 ~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~ 1024 (1427)
+..+.++.++++++.++|. ...+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++
T Consensus 397 ~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~ 471 (529)
T PRK15134 397 SAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSL 471 (529)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHH
Confidence 2334456788999999997 4566655 479999999999999999999999999999999999999999999999
Q ss_pred HhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1025 VDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1025 ~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+++ |+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 472 ~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 472 QQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 865 899999999975 46778999999986 578887764
No 28
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.5e-62 Score=615.73 Aligned_cols=445 Identities=23% Similarity=0.298 Sum_probs=341.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECC-----------------------eec
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKL--DSSLKKSGNITYNG-----------------------YKL 221 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~ 221 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.. +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 454 89999972 221
Q ss_pred C-------c------ccccceEEEEccC-CCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHH
Q 000555 222 D-------E------FHVQRTSAYISQT-DNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAF 287 (1427)
Q Consensus 222 ~-------~------~~~~~~~~yv~Q~-~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 287 (1427)
. . ...++.++|++|+ +.+++.+||+||+.|+....+.. ..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~-----------~~--------------- 143 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE-----------GK--------------- 143 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC-----------HH---------------
Confidence 0 0 0124569999997 67888899999999875432210 00
Q ss_pred HhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHH
Q 000555 288 MKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVK 367 (1427)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~ 367 (1427)
+...+++++++.+||++.. ++.+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+
T Consensus 144 ---------~~~~~~~~~l~~~gl~~~~-----~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~ 209 (520)
T TIGR03269 144 ---------EAVGRAVDLIEMVQLSHRI-----THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHN 209 (520)
T ss_pred ---------HHHHHHHHHHHHcCChhhh-----hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHH
Confidence 0012367789999997543 34456799999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhc
Q 000555 368 CLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQ 447 (1427)
Q Consensus 368 ~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~ 447 (1427)
.|++++++.|+|||++. |....+.++||+|++|++|++++.|+++++.+.+.
T Consensus 210 ~l~~l~~~~g~tviivt-Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~--------------------------- 261 (520)
T TIGR03269 210 ALEEAVKASGISMVLTS-HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM--------------------------- 261 (520)
T ss_pred HHHHHHHhcCcEEEEEe-CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH---------------------------
Confidence 99999776688998865 55567778999999999999988776654311000
Q ss_pred cccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHH
Q 000555 448 YWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYI 527 (1427)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~ 527 (1427)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHH
Q 000555 528 FRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVAS 607 (1427)
Q Consensus 528 ~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~ 607 (1427)
. . .
T Consensus 262 -----------------~--~-----~----------------------------------------------------- 264 (520)
T TIGR03269 262 -----------------E--G-----V----------------------------------------------------- 264 (520)
T ss_pred -----------------h--h-----c-----------------------------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhc
Q 000555 608 WILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGF 687 (1427)
Q Consensus 608 ~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf 687 (1427)
.
T Consensus 265 -------------------------~------------------------------------------------------ 265 (520)
T TIGR03269 265 -------------------------S------------------------------------------------------ 265 (520)
T ss_pred -------------------------h------------------------------------------------------
Confidence 0
Q ss_pred cccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHH
Q 000555 688 IIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFN 767 (1427)
Q Consensus 688 ~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~ 767 (1427)
.+
T Consensus 266 -----~~------------------------------------------------------------------------- 267 (520)
T TIGR03269 266 -----EV------------------------------------------------------------------------- 267 (520)
T ss_pred -----hh-------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHhcCcCCCccccccchhhhhHHhhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCC
Q 000555 768 SVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGI 847 (1427)
Q Consensus 768 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 847 (1427)
... . ..+ . + ...++++|+++.++..
T Consensus 268 -------------~~~-------------~----------~~~---~--~------~~~l~~~~l~~~~~~~-------- 292 (520)
T TIGR03269 268 -------------EKE-------------C----------EVE---V--G------EPIIKVRNVSKRYISV-------- 292 (520)
T ss_pred -------------ccc-------------c----------ccC---C--C------CceEEEeccEEEeccC--------
Confidence 000 0 000 0 0 0136888888766310
Q ss_pred CcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEEC-Ccc---CCc------ccccceEEEE
Q 000555 848 PEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS-GYP---KEQ------STFARISGYV 917 (1427)
Q Consensus 848 ~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~---~~~------~~~~~~~gyv 917 (1427)
..+++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+ ... ...++.+||+
T Consensus 293 ~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v 370 (520)
T TIGR03269 293 DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGIL 370 (520)
T ss_pred CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHHHhhhEEEE
Confidence 0123469999999999999999999999999999999999865 357999996 532 111 1234568999
Q ss_pred ccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHHHHHHHHHH
Q 000555 918 EQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-----LRDALVGFPGSSGLSTEQRKRLTIAVE 992 (1427)
Q Consensus 918 ~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~~~~~~LSgGqrqrl~ia~a 992 (1427)
+|++.+++.+||+|++.+...+. .+.+..++.++++++.++|.+ ..++.+ ..|||||||||+||+|
T Consensus 371 ~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~~LSgGq~qrv~lara 441 (520)
T TIGR03269 371 HQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP-----DELSEGERHRVALAQV 441 (520)
T ss_pred ccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh-----hhCCHHHHHHHHHHHH
Confidence 99998899999999998764321 122333456888999999975 345554 5799999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 993 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 993 L~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|+.+|++|+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 442 l~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 442 LIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999999999999764 899999999986 57778999999986 677777764
No 29
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.1e-62 Score=611.47 Aligned_cols=453 Identities=20% Similarity=0.275 Sum_probs=341.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999876 899999999875432 12469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.|+.... . ....+++++++.+||++..+.
T Consensus 101 ~tv~e~l~~~~~~~--------------~-------------------------~~~~~~~~~l~~~~l~~~~~~----- 136 (510)
T PRK15439 101 LSVKENILFGLPKR--------------Q-------------------------ASMQKMKQLLAALGCQLDLDS----- 136 (510)
T ss_pred CcHHHHhhcccccc--------------h-------------------------HHHHHHHHHHHHcCCCccccC-----
Confidence 99999998852100 0 001235678999999765444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++. |...++.++||+|++|+
T Consensus 137 ~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiivt-Hd~~~~~~~~d~i~~l~ 214 (510)
T PRK15439 137 SAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-QGVGIVFIS-HKLPEIRQLADRISVMR 214 (510)
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEE
Confidence 4456999999999999999999999999999999999999999999999865 488998864 55667889999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|++++.|+++++... +.+ +.+.
T Consensus 215 ~G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~------------- 237 (510)
T PRK15439 215 DGTIALSGKTADLSTD---------------DII-----------------------------QAIT------------- 237 (510)
T ss_pred CCEEEEecChHHcCHH---------------HHH-----------------------------HHHh-------------
Confidence 9999999987654210 000 0000
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
..... .....
T Consensus 238 ---------------------------------------------------------------~~~~~-~~~~~------ 247 (510)
T PRK15439 238 ---------------------------------------------------------------PAARE-KSLSA------ 247 (510)
T ss_pred ---------------------------------------------------------------Ccccc-ccccc------
Confidence 00000 00000
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
..+
T Consensus 248 ---------------------------------------------------~~~-------------------------- 250 (510)
T PRK15439 248 ---------------------------------------------------SQK-------------------------- 250 (510)
T ss_pred ---------------------------------------------------ccc--------------------------
Confidence 000
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
.. ..+ + .
T Consensus 251 -~~-----------------~~~---------------------------------~--~-------------------- 257 (510)
T PRK15439 251 -LW-----------------LEL---------------------------------P--G-------------------- 257 (510)
T ss_pred -cc-----------------ccc---------------------------------c--c--------------------
Confidence 00 000 0 0
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
. .... + .+ +..++++|++. .+|+|||++|++||++||+||||||||||+
T Consensus 258 --~-~~~~---~-~~------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 306 (510)
T PRK15439 258 --N-RRQQ---A-AG------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAGRTELA 306 (510)
T ss_pred --c-cccc---C-CC------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCCHHHHH
Confidence 0 0000 0 00 11367777751 148999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQND---IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVE 955 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~ 955 (1427)
++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+..........++.++
T Consensus 307 ~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~ 384 (510)
T PRK15439 307 ETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLE 384 (510)
T ss_pred HHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHH
Confidence 999997653 479999999865431 1235689999984 4788899999986421111110011222345688
Q ss_pred HHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000555 956 EVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCT 1034 (1427)
Q Consensus 956 ~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~ 1034 (1427)
++++.+++. +..++.+ ..|||||||||+||++|+.+|+||||||||+|||+.+...+.+.|++++++|.|||++
T Consensus 385 ~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIiv 459 (510)
T PRK15439 385 RYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFI 459 (510)
T ss_pred HHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEE
Confidence 999999997 6677766 4799999999999999999999999999999999999999999999998889999999
Q ss_pred ecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1035 IHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1035 ~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
+|++. .+.+.||++++|++ |+++..|..+
T Consensus 460 sHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 460 SSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred CCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99986 57788999999986 6788777653
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.5e-62 Score=609.07 Aligned_cols=460 Identities=19% Similarity=0.283 Sum_probs=343.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|. +.+|+|.++|+++.... .++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998752 13899999999875432 23569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++....... +. .... ....+++++++.+||++..+ ++
T Consensus 93 ~tv~~~l~~~~~~~~~~-~~------~~~~------------------------~~~~~~~~~l~~~~l~~~~~----~~ 137 (500)
T TIGR02633 93 LSVAENIFLGNEITLPG-GR------MAYN------------------------AMYLRAKNLLRELQLDADNV----TR 137 (500)
T ss_pred CcHHHHHHhhccccccc-cc------cCHH------------------------HHHHHHHHHHHHcCCCCCcc----cC
Confidence 99999998864321000 00 0000 00123567899999975321 23
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++++ .|+|||++. |...++.+.||+|++|+
T Consensus 138 ~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiit-Hd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 138 PVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYIS-HKLNEVKAVCDTICVIR 215 (500)
T ss_pred chhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe-CcHHHHHHhCCEEEEEe
Confidence 4567999999999999999999999999999999999999999999999865 588988864 55678889999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|++++.|+.+++.. +...
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~----------------- 234 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDII----------------- 234 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHH-----------------
Confidence 999987654321000 0000
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
. .+. + .
T Consensus 235 ------------------------------~-----------------------------~~~--~---~---------- 240 (500)
T TIGR02633 235 ------------------------------T-----------------------------MMV--G---R---------- 240 (500)
T ss_pred ------------------------------H-----------------------------HHh--C---c----------
Confidence 0 000 0 0
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
+
T Consensus 241 ------------------------~------------------------------------------------------- 241 (500)
T TIGR02633 241 ------------------------E------------------------------------------------------- 241 (500)
T ss_pred ------------------------c-------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
.
T Consensus 242 ---------------------------------------------------~---------------------------- 242 (500)
T TIGR02633 242 ---------------------------------------------------I---------------------------- 242 (500)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
. . .. . .
T Consensus 243 -----~--------------------~-----------------------------~~-------~--------~----- 248 (500)
T TIGR02633 243 -----T--------------------S-----------------------------LY-------P--------H----- 248 (500)
T ss_pred -----c--------------------c-----------------------------cc-------c--------c-----
Confidence 0 0 00 0 0
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
...+ . + +..++++|+++.+.. .+++.+|+|+||+|++||+++|+|||||||||||
T Consensus 249 ----~~~~---~--~------~~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl 303 (500)
T TIGR02633 249 ----EPHE---I--G------DVILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELV 303 (500)
T ss_pred ----cccC---C--C------CceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeCCCCCCHHHHH
Confidence 0000 0 0 013678888754310 0124589999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHh--ccCCcCCCHHHHHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQ----STFARISGYVEQND---IHSPQVTVEESLWFSAN--LRLSKEVSKNQRHEF 953 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~--l~~~~~~~~~~~~~~ 953 (1427)
++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+|++.+... ............++.
T Consensus 304 ~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (500)
T TIGR02633 304 QALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQI 382 (500)
T ss_pred HHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHH
Confidence 999998642 147999999987632 12356789999995 57899999999987532 110001122334466
Q ss_pred HHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q 000555 954 VEEVMRLVELDS-LRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1032 (1427)
Q Consensus 954 v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi 1032 (1427)
++++++.+++.+ ..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|.|||
T Consensus 383 ~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi 457 (500)
T TIGR02633 383 IGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAII 457 (500)
T ss_pred HHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEE
Confidence 889999999964 466665 47999999999999999999999999999999999999999999999988899999
Q ss_pred EEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1033 CTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1033 ~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+++|+++ ++.+.+|++++|++ |+++..++.
T Consensus 458 ivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 458 VVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred EECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999986 57788999999986 577776654
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-62 Score=607.20 Aligned_cols=451 Identities=20% Similarity=0.298 Sum_probs=340.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc----cccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF----HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999875 89999999987532 134679999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++...... +. .... +...+++++++.+||++..+ +
T Consensus 94 ~tv~~~l~~~~~~~~~--~~------~~~~------------------------~~~~~~~~~l~~~~l~~~~~-----~ 136 (501)
T PRK11288 94 MTVAENLYLGQLPHKG--GI------VNRR------------------------LLNYEAREQLEHLGVDIDPD-----T 136 (501)
T ss_pred CCHHHHHHhccccccc--CC------CCHH------------------------HHHHHHHHHHHHcCCCCCcC-----C
Confidence 9999999985321000 00 0000 00123567899999975443 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++++ .|+|+|++. |...++.++||+|++|+
T Consensus 137 ~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiit-Hd~~~~~~~~d~i~~l~ 214 (501)
T PRK11288 137 PLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYVS-HRMEEIFALCDAITVFK 214 (501)
T ss_pred chhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe-CCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999999865 488998865 45567889999999999
Q ss_pred CCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhcc
Q 000555 403 EGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSLS 482 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l~ 482 (1427)
+|+++..++..+. .+.++..+.
T Consensus 215 ~G~i~~~~~~~~~-------------------------------------------~~~~~~~~~--------------- 236 (501)
T PRK11288 215 DGRYVATFDDMAQ-------------------------------------------VDRDQLVQA--------------- 236 (501)
T ss_pred CCEEEeecCcccc-------------------------------------------CCHHHHHHH---------------
Confidence 9999754321100 000000000
Q ss_pred CCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHHH
Q 000555 483 VPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYLS 562 (1427)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 562 (1427)
+. . ..
T Consensus 237 -------------------------------------------------------------~~--~--~~---------- 241 (501)
T PRK11288 237 -------------------------------------------------------------MV--G--RE---------- 241 (501)
T ss_pred -------------------------------------------------------------hc--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHHH
Q 000555 563 CLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFRH 642 (1427)
Q Consensus 563 ~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~~ 642 (1427)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhccC
Q 000555 643 MFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAAA 722 (1427)
Q Consensus 643 ~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 722 (1427)
.
T Consensus 242 ---------------------------------------------------~---------------------------- 242 (501)
T PRK11288 242 ---------------------------------------------------I---------------------------- 242 (501)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhhh
Q 000555 723 RWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQF 802 (1427)
Q Consensus 723 ~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1427)
. . . ..
T Consensus 243 -----~---------------~----~----------------------------~~----------------------- 247 (501)
T PRK11288 243 -----G---------------D----I----------------------------YG----------------------- 247 (501)
T ss_pred -----c---------------c----c----------------------------cc-----------------------
Confidence 0 0 0 00
Q ss_pred ccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHH
Q 000555 803 EINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLM 882 (1427)
Q Consensus 803 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl 882 (1427)
..+. + . .+..++++|+++ +.+++|+|++|++||++||+||||||||||+
T Consensus 248 -----~~~~--~-~------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~NGsGKSTLl 296 (501)
T PRK11288 248 -----YRPR--P-L------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGLVGAGRSELM 296 (501)
T ss_pred -----cccc--C-C------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcCCCCCHHHHH
Confidence 0000 0 0 011367777752 1379999999999999999999999999999
Q ss_pred hhhcCCCCCceeEEEEEECCccCCc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHhccC-CcC--CCHHHHHH
Q 000555 883 DVLAGRKTGGYIEGDIKISGYPKEQ----STFARISGYVEQND---IHSPQVTVEESLWFSANLRL-SKE--VSKNQRHE 952 (1427)
Q Consensus 883 ~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~-~~~--~~~~~~~~ 952 (1427)
++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+...... ... ......++
T Consensus 297 k~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 374 (501)
T PRK11288 297 KLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAE 374 (501)
T ss_pred HHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHH
Confidence 99999765 357999999986532 12345789999985 48889999999987532111 000 12223345
Q ss_pred HHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q 000555 953 FVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTV 1031 (1427)
Q Consensus 953 ~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tv 1031 (1427)
.++++++.+++. +..++.++ .|||||||||+||++|+.+|++|||||||+|||+.+...+++.|++++++|.||
T Consensus 375 ~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 449 (501)
T PRK11288 375 NADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAV 449 (501)
T ss_pred HHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEE
Confidence 678999999994 66777764 799999999999999999999999999999999999999999999998889999
Q ss_pred EEEecCCCHHHHHhhceEEEEecCcEEEEccCCCC
Q 000555 1032 VCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGV 1066 (1427)
Q Consensus 1032 i~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~ 1066 (1427)
|+++|++. .+.+.+|++++|++ |++++.|..++
T Consensus 450 iivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 450 LFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred EEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 99999986 57788999999986 67888887653
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-61 Score=598.77 Aligned_cols=449 Identities=18% Similarity=0.265 Sum_probs=338.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999875 999999999875321 24679999999888899
Q ss_pred CCHHHHHHHHHH-hcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 243 LTVRETFDFAAR-WQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 243 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
+||+||+.++.. ..+.. .... ....+++++++.+|+++..+.
T Consensus 88 ~tv~~~l~~~~~~~~~~~---------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~---- 130 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF---------VDQD------------------------KMYRDTKAIFDELDIDIDPRA---- 130 (491)
T ss_pred CCHHHHhhcccccccccc---------cCHH------------------------HHHHHHHHHHHHcCCCCCccC----
Confidence 999999987531 11000 0000 001135678899999754444
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
.+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++++ .|+|+|++. |...++.++||+|++|
T Consensus 131 -~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~t-H~~~~~~~~~d~i~~l 207 (491)
T PRK10982 131 -KVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYIS-HKMEEIFQLCDEITIL 207 (491)
T ss_pred -chhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEe-cCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999999865 488998864 5567788999999999
Q ss_pred eCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhhc
Q 000555 402 SEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSSL 481 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~l 481 (1427)
++|+++..|+++++.. .+..+.
T Consensus 208 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~~-------------- 229 (491)
T PRK10982 208 RDGQWIATQPLAGLTM--------------------------------------------DKIIAM-------------- 229 (491)
T ss_pred ECCEEEeecChhhCCH--------------------------------------------HHHHHH--------------
Confidence 9999998776543100 000000
Q ss_pred cCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhHH
Q 000555 482 SVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLYL 561 (1427)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~ 561 (1427)
+. +. .
T Consensus 230 --------------------------------------------------------------~~--~~--~--------- 234 (491)
T PRK10982 230 --------------------------------------------------------------MV--GR--S--------- 234 (491)
T ss_pred --------------------------------------------------------------Hh--CC--C---------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHHH
Q 000555 562 SCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFFR 641 (1427)
Q Consensus 562 g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~~ 641 (1427)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhcc
Q 000555 642 HMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFAA 721 (1427)
Q Consensus 642 ~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 721 (1427)
.
T Consensus 235 ----------------------------------------------------~--------------------------- 235 (491)
T PRK10982 235 ----------------------------------------------------L--------------------------- 235 (491)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred CcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhhh
Q 000555 722 ARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQQ 801 (1427)
Q Consensus 722 ~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1427)
. ... .
T Consensus 236 ------~-------------------------------------------------~~~-------~------------- 240 (491)
T PRK10982 236 ------T-------------------------------------------------QRF-------P------------- 240 (491)
T ss_pred ------c-------------------------------------------------ccc-------c-------------
Confidence 0 000 0
Q ss_pred hccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHH
Q 000555 802 FEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTL 881 (1427)
Q Consensus 802 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTL 881 (1427)
. +...+ .+..++++|+++. .+++|+|||+++++||+++|+||||||||||
T Consensus 241 ------~-~~~~~--------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTL 290 (491)
T PRK10982 241 ------D-KENKP--------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAGLVGAKRTDI 290 (491)
T ss_pred ------c-ccCCC--------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEecCCCCCHHHH
Confidence 0 00000 0113788888753 1248999999999999999999999999999
Q ss_pred HhhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccCC---CCCCCCCHHHHHHHHH--hccCCcC-CCHHHHH
Q 000555 882 MDVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQND---IHSPQVTVEESLWFSA--NLRLSKE-VSKNQRH 951 (1427)
Q Consensus 882 l~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~--~l~~~~~-~~~~~~~ 951 (1427)
+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .+++.+|+.++..+.. ....... .+.....
T Consensus 291 l~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (491)
T PRK10982 291 VETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK 368 (491)
T ss_pred HHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH
Confidence 999999765 3579999999876431 1245589999985 3678898887743321 0000001 1222334
Q ss_pred HHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCE
Q 000555 952 EFVEEVMRLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRT 1030 (1427)
Q Consensus 952 ~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~t 1030 (1427)
+.++++++.+++. +..++.+ ..||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++.++|+|
T Consensus 369 ~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~t 443 (491)
T PRK10982 369 SDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKG 443 (491)
T ss_pred HHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCE
Confidence 5678899999995 4556665 489999999999999999999999999999999999999999999999888999
Q ss_pred EEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1031 VVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1031 vi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||++||+++ ++.+.+|++++|++ |+++..++.
T Consensus 444 vi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 444 IIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred EEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 999999986 57788999999986 566655543
No 33
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3e-59 Score=518.52 Aligned_cols=470 Identities=23% Similarity=0.345 Sum_probs=365.0
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc---cc---c-ceEEEEcc
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF---HV---Q-RTSAYISQ 235 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~---~~---~-~~~~yv~Q 235 (1427)
....++++|||.+++||.+||+|.||||||-..+.+.|+++.. ...+|+|.|+|+++-.. .. + ..|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3567999999999999999999999999999999999998763 34589999999987432 12 2 47999999
Q ss_pred CCC--CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcc
Q 000555 236 TDN--HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDL 313 (1427)
Q Consensus 236 ~~~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 313 (1427)
+|. +-|-.|+..-|.-..++... +++ ...+.++-++|+..|+++
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg----------~~~------------------------~~Ar~r~lelL~~VgI~~ 146 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG----------LSR------------------------AAARARALELLELVGIPE 146 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc----------ccH------------------------HHHHHHHHHHHHHcCCCc
Confidence 984 56666877777665554311 111 111234667888999976
Q ss_pred ccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHh
Q 000555 314 CSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFD 393 (1427)
Q Consensus 314 ~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~ 393 (1427)
-... -+.++.+|||||||||.||.||+.+|++|+-||||++||.....+|.++|+++.++.|..+++ |+|+..-+-+
T Consensus 147 p~~r--l~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lf-ITHDL~iVr~ 223 (534)
T COG4172 147 PEKR--LDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILF-ITHDLGIVRK 223 (534)
T ss_pred hhhh--hhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEE-EeccHHHHHH
Confidence 4332 256788999999999999999999999999999999999999999999999999999999998 4677888899
Q ss_pred hcCcEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChh
Q 000555 394 LFDDLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRF 473 (1427)
Q Consensus 394 ~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 473 (1427)
++|+|+||.+|+++++|+.+++.. .|.+ ||
T Consensus 224 ~ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pY----------------- 253 (534)
T COG4172 224 FADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PY----------------- 253 (534)
T ss_pred hhhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hH-----------------
Confidence 999999999999999999887642 1110 00
Q ss_pred hHhHhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 000555 474 GKALKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTD 553 (1427)
Q Consensus 474 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~ 553 (1427)
.|.++ .
T Consensus 254 ---------------------------------------Tr~Ll------------------------------~----- 259 (534)
T COG4172 254 ---------------------------------------TRKLL------------------------------A----- 259 (534)
T ss_pred ---------------------------------------HHHHH------------------------------h-----
Confidence 00000 0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcC
Q 000555 554 EKNGNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFA 633 (1427)
Q Consensus 554 ~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~ 633 (1427)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHH
Q 000555 634 PETGRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSA 713 (1427)
Q Consensus 634 ~~~~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~a 713 (1427)
+
T Consensus 260 ----------------------------a--------------------------------------------------- 260 (534)
T COG4172 260 ----------------------------A--------------------------------------------------- 260 (534)
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred HHHHhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhh
Q 000555 714 ISVNEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEEN 793 (1427)
Q Consensus 714 l~~nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~ 793 (1427)
.+
T Consensus 261 --------------eP---------------------------------------------------------------- 262 (534)
T COG4172 261 --------------EP---------------------------------------------------------------- 262 (534)
T ss_pred --------------CC----------------------------------------------------------------
Confidence 00
Q ss_pred hHHhhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcC
Q 000555 794 SVKMAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGS 873 (1427)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~ 873 (1427)
...+.. ..+..+.-++.+|++..++.+..+-.. ......++++||++.++||.+||+|.
T Consensus 263 -------------~g~~~p------~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gqTlGlVGE 321 (534)
T COG4172 263 -------------SGDPPP------LPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQTLGLVGE 321 (534)
T ss_pred -------------CCCCCC------CCCCCCceEEecceEEEEecCCccccc--cchheEEeccceeEecCCCeEEEEec
Confidence 000000 001112345666665555444332111 11235689999999999999999999
Q ss_pred CCCChhHHHhhhcCCCCCceeEEEEEECCccCCc------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCC
Q 000555 874 SGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEV 945 (1427)
Q Consensus 874 sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~ 945 (1427)
||||||||-.+|.+...+ +|+|.++|.++.. ..+|+.+-.|+||+ .+.|.+||.+-+.-+.....+ ..
T Consensus 322 SGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~-~l 397 (534)
T COG4172 322 SGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEP-KL 397 (534)
T ss_pred CCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCC-CC
Confidence 999999999999997753 5999999998753 34677889999998 578999999998877665533 46
Q ss_pred CHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000555 946 SKNQRHEFVEEVMRLVELDSLR-DALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1024 (1427)
Q Consensus 946 ~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~ 1024 (1427)
+..++++++.++|+.+||++.. +.. +.++|||||||++|||||+-+|++++||||||+||-.-..+|+++|+++
T Consensus 398 s~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~L 472 (534)
T COG4172 398 SAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDL 472 (534)
T ss_pred CHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHH
Confidence 8899999999999999998643 332 4689999999999999999999999999999999999999999999999
Q ss_pred Hh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1025 VD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1025 ~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
.+ .|.+-++++||.. -+-.+||+|+||++ |+++..||.
T Consensus 473 Q~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 473 QQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred HHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 75 5899999999976 36778999999986 799999985
No 34
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.8e-60 Score=588.64 Aligned_cols=445 Identities=20% Similarity=0.284 Sum_probs=326.7
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCC--C--
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNH--I-- 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~--~-- 240 (1427)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999999875 89999999765432 223568999997532 1
Q ss_pred ----CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 241 ----PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 241 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
..+||+|++.+... ...+++++++.+||++..+
T Consensus 94 ~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~~~l~~~~l~~~~~ 130 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEVK-------------------------------------------DPARCEQLAQQFGITALLD 130 (490)
T ss_pred chhhccccHHHhcccchh-------------------------------------------HHHHHHHHHHHcCCHhhhh
Confidence 14577776643100 0113567889999976444
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
+.+..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++++ |+|+|++. |...++.+.||
T Consensus 131 -----~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-g~tvii~t-H~~~~~~~~~d 203 (490)
T PRK10938 131 -----RRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQS-GITLVLVL-NRFDEIPDFVQ 203 (490)
T ss_pred -----CCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhc-CCeEEEEe-CCHHHHHhhCC
Confidence 445569999999999999999999999999999999999999999999998764 88998865 45677889999
Q ss_pred cEEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHh
Q 000555 397 DLLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKA 476 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 476 (1427)
+|++|++|+++.+|+++++... +.+... . .
T Consensus 204 ~v~~l~~G~i~~~~~~~~~~~~---------------~~~~~~-----------------------------~-----~- 233 (490)
T PRK10938 204 FAGVLADCTLAETGEREEILQQ---------------ALVAQL-----------------------------A-----H- 233 (490)
T ss_pred EEEEEECCEEEEeCCHHHHhcc---------------hhhhhh-----------------------------h-----h-
Confidence 9999999999999887654210 000000 0 0
Q ss_pred HhhhccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccc
Q 000555 477 LKSSLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKN 556 (1427)
Q Consensus 477 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~ 556 (1427)
.+ .... .
T Consensus 234 ------------------------------------~~---------------------------------~~~~--~-- 240 (490)
T PRK10938 234 ------------------------------------SE---------------------------------QLEG--V-- 240 (490)
T ss_pred ------------------------------------hh---------------------------------ccCc--c--
Confidence 00 0000 0
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCch
Q 000555 557 GNLYLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPET 636 (1427)
Q Consensus 557 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~ 636 (1427)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHH
Q 000555 637 GRFFRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISV 716 (1427)
Q Consensus 637 ~~F~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 716 (1427)
..|
T Consensus 241 --------------------------------------------------------~~~--------------------- 243 (490)
T PRK10938 241 --------------------------------------------------------QLP--------------------- 243 (490)
T ss_pred --------------------------------------------------------ccC---------------------
Confidence 000
Q ss_pred HhhccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHH
Q 000555 717 NEFAAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVK 796 (1427)
Q Consensus 717 nef~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~ 796 (1427)
. . .+
T Consensus 244 -----------~------------------------------------------------------~----~~------- 247 (490)
T PRK10938 244 -----------E------------------------------------------------------P----DE------- 247 (490)
T ss_pred -----------c------------------------------------------------------c----cc-------
Confidence 0 0 00
Q ss_pred hhhhhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCC
Q 000555 797 MAKQQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGA 876 (1427)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGa 876 (1427)
. .. +...+. ....++++|+++.++ ++.+|+|+||++++||+++|+|||||
T Consensus 248 ~---------~~-~~~~~~-------~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGs 297 (490)
T PRK10938 248 P---------SA-RHALPA-------NEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGA 297 (490)
T ss_pred c---------cc-ccccCC-------CCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCC
Confidence 0 00 000000 011378999987652 24589999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCceeEEEEEECCccCCc----ccccceEEEEccCCCCCC--CCCHHHHHHHHHhc--cCCcCCCHH
Q 000555 877 GKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ----STFARISGYVEQNDIHSP--QVTVEESLWFSANL--RLSKEVSKN 948 (1427)
Q Consensus 877 GKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~~~~~~--~lTv~e~l~~~~~l--~~~~~~~~~ 948 (1427)
|||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.+++ ..|+++++.+.... ....... .
T Consensus 298 GKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 375 (490)
T PRK10938 298 GKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-D 375 (490)
T ss_pred CHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-H
Confidence 999999999996431 137999999976421 123567999999876543 35777766543210 1111111 2
Q ss_pred HHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000555 949 QRHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1027 (1427)
Q Consensus 949 ~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~ 1027 (1427)
+..+.++++++.++|.+ ..+..+ ..|||||||||+||++|+.+|++|+|||||+|||+.+...+++.|++++++
T Consensus 376 ~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~ 450 (490)
T PRK10938 376 RQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISE 450 (490)
T ss_pred HHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhc
Confidence 23456889999999987 777765 479999999999999999999999999999999999999999999999876
Q ss_pred C-CEEEEEecCCCHHHHH-hhceEEEEecCcEEEE
Q 000555 1028 G-RTVVCTIHQPSIDIFE-AFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 1028 g-~tvi~~~H~~~~~~~~-~~D~v~~l~~gg~~~~ 1060 (1427)
| .|||+++|+++ ++.+ .+|++++|++| +++.
T Consensus 451 ~~~tviivsHd~~-~~~~~~~d~v~~l~~G-~i~~ 483 (490)
T PRK10938 451 GETQLLFVSHHAE-DAPACITHRLEFVPDG-DIYR 483 (490)
T ss_pred CCcEEEEEecchh-hhhhhhheeEEEecCC-ceEE
Confidence 5 47999999976 4555 48999999875 5444
No 35
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-58 Score=573.61 Aligned_cols=199 Identities=20% Similarity=0.272 Sum_probs=163.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 589999987663 2458999999999999999999999999999999999765 35799999873
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000555 906 EQSTFARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 982 (1427)
+.+||++|+.. +.+.+||+|++.+.. .. ....+.++++++.+++. +..+..+ ..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-----~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-----GDDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-----CccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 45899999864 456799999986421 01 11134578899999994 5666665 489999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||++||++. .+...+|++++|++|+.+.+.|
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~g~i~~~~g 518 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITPDGVVDFSG 518 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEECCeEEEcCC
Confidence 999999999999999999999999999999999999999886 459999999975 5677899999998754444777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 519 ~~ 520 (530)
T PRK15064 519 TY 520 (530)
T ss_pred CH
Confidence 54
No 36
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.2e-57 Score=571.57 Aligned_cols=201 Identities=22% Similarity=0.294 Sum_probs=163.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 489999987652 2468999999999999999999999999999999999765 35799998532
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000555 906 EQSTFARISGYVEQND-IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 983 (1427)
..+||++|+. .+++.+||+|++.+...... .... ...++++++.+++.+ ..+..+ ..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 67889999999987643221 1111 123457899999964 456655 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEE-Ecc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI-YGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~g 1062 (1427)
|||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. .|||+++|++. .+...+|++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 48999999975 5777899999998756655 555
Q ss_pred C
Q 000555 1063 K 1063 (1427)
Q Consensus 1063 ~ 1063 (1427)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.3e-56 Score=564.64 Aligned_cols=201 Identities=21% Similarity=0.294 Sum_probs=163.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 488999987652 2469999999999999999999999999999999999765 35799998542
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000555 906 EQSTFARISGYVEQND-IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 983 (1427)
..+||++|+. .+++.+||.|++.+...... .... ...++++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 47888999999988643211 1111 123557899999964 456655 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEE-Ecc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI-YGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~g 1062 (1427)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+...+|++++|++||++. +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999975 4677899999998766655 555
Q ss_pred C
Q 000555 1063 K 1063 (1427)
Q Consensus 1063 ~ 1063 (1427)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.2e-55 Score=548.76 Aligned_cols=211 Identities=23% Similarity=0.288 Sum_probs=171.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ + ..|+++|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 478899886552 1 24899999999999999999999999999999999765 357999875
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+..+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998888999999999875311 111 124678999999988778776 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999975 4667899999996 4 55555553
Q ss_pred CCC---chhHHHHHHhc
Q 000555 1065 GVH---SKTMIDYFQAL 1078 (1427)
Q Consensus 1065 ~~~---~~~~~~yf~~~ 1078 (1427)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 321 13456677776
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.8e-54 Score=550.47 Aligned_cols=202 Identities=25% Similarity=0.326 Sum_probs=164.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 489999987653 2468999999999999999999999999999999999765 35799988 4321
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000555 906 EQSTFARISGYVEQND-IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 983 (1427)
.+||++|+. .+++.+||.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5788999999998753210 011 1133577889999985 4556665 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe-cCcEEEEcc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-RGGRVIYGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-~gg~~~~~g 1062 (1427)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++||+.. .+...+|++++|. +|+...|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 469999999975 4667899999997 666667777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 40
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-54 Score=547.83 Aligned_cols=198 Identities=21% Similarity=0.310 Sum_probs=160.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|++|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 489999987663 3468999999999999999999999999999999999765 35799998641
Q ss_pred CcccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000555 906 EQSTFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 982 (1427)
..+||++|+. .+.+..|+.+++.- .. .......+.++++.+++.. ..+..+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~~------~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---LA------PQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---hC------chhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 34566778776531 11 1122345788999999963 566666 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||+|+|++. .+...||++++|++|..+.|.|
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~G~i~~~~g 510 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHDGKVEPFDG 510 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEECCEEEEcCC
Confidence 999999999999999999999999999999999999999987 349999999975 4677899999998754334777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 511 ~~ 512 (638)
T PRK10636 511 DL 512 (638)
T ss_pred CH
Confidence 64
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-53 Score=501.45 Aligned_cols=448 Identities=24% Similarity=0.382 Sum_probs=346.2
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc----cceEEEEccCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV----QRTSAYISQTDNHI 240 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 240 (1427)
...++|+|||++++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....+ ..-|+.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3568999999999999999999999999999999999999986 9999999998865443 34589999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
|++||.|||-++...... .+. +.+ +....+...+|+.+|+....++.|+
T Consensus 96 p~LsVaeNifLgre~~~~-~g~------id~------------------------~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRR-FGL------IDR------------------------KAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred CCccHHHHhhcccccccC-CCc------cCH------------------------HHHHHHHHHHHHHcCCCCChhhhhh
Confidence 999999999887543221 000 000 0112246778999999654666666
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+ ||+||||-|.|||||..+++|++||||||+|+...+.++++.++++. ..|.++|. ++|..+|+++.||+|.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk-~~Gv~ii~-ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK-AQGVAIIY-ISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH-hCCCEEEE-EcCcHHHHHHhcCEEEE
Confidence 5 99999999999999999999999999999999999999999999986 46999998 57789999999999999
Q ss_pred EeCCeEEEecCh-HHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhh
Q 000555 401 LSEGHLVYQGPR-AEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKS 479 (1427)
Q Consensus 401 L~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 479 (1427)
|.+|+.+..++. ++.- .+++.
T Consensus 218 lRDG~~v~~~~~~~~~~--------------------------------------------~~~lv-------------- 239 (500)
T COG1129 218 LRDGRVVGTRPTAAETS--------------------------------------------EDELV-------------- 239 (500)
T ss_pred EeCCEEeeecccccCCC--------------------------------------------HHHHH--------------
Confidence 999999876552 2110 00000
Q ss_pred hccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhh
Q 000555 480 SLSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNL 559 (1427)
Q Consensus 480 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~ 559 (1427)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHH
Q 000555 560 YLSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRF 639 (1427)
Q Consensus 560 ~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F 639 (1427)
. .|+|=
T Consensus 240 ----------~---------------------------------------------------------~MvGr------- 245 (500)
T COG1129 240 ----------R---------------------------------------------------------LMVGR------- 245 (500)
T ss_pred ----------H---------------------------------------------------------HhhCc-------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhh
Q 000555 640 FRHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEF 719 (1427)
Q Consensus 640 ~~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 719 (1427)
++
T Consensus 246 ------------------------------------------------------------------------------~~ 247 (500)
T COG1129 246 ------------------------------------------------------------------------------EL 247 (500)
T ss_pred ------------------------------------------------------------------------------ch
Confidence 00
Q ss_pred ccCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhh
Q 000555 720 AAARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAK 799 (1427)
Q Consensus 720 ~~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1427)
. ..|
T Consensus 248 ~-~~~--------------------------------------------------------------------------- 251 (500)
T COG1129 248 E-DLF--------------------------------------------------------------------------- 251 (500)
T ss_pred h-hhc---------------------------------------------------------------------------
Confidence 0 000
Q ss_pred hhhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChh
Q 000555 800 QQFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKT 879 (1427)
Q Consensus 800 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKS 879 (1427)
+.. +.. ...+..++++|++. ...++|+||++++||++||-|-=|||+|
T Consensus 252 ----------~~~-~~~----~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGiaGLvGaGRT 299 (500)
T COG1129 252 ----------PEP-PEE----GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGIAGLVGAGRT 299 (500)
T ss_pred ----------ccc-ccc----CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEEeccccCCHH
Confidence 000 000 00112356676642 1146799999999999999999999999
Q ss_pred HHHhhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccC---CCCCCCCCHHHHHHHHHhccCCc--CCCHHHH
Q 000555 880 TLMDVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQN---DIHSPQVTVEESLWFSANLRLSK--EVSKNQR 950 (1427)
Q Consensus 880 TLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~---~~~~~~lTv~e~l~~~~~l~~~~--~~~~~~~ 950 (1427)
-|+++|.|... ...|+|.+||.+.... ..+.-++|||.| +-+++.++|++|+.++..-+... -.+....
T Consensus 300 El~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e 377 (500)
T COG1129 300 ELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKE 377 (500)
T ss_pred HHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHH
Confidence 99999999543 3479999999976532 345568999987 45789999999998883222221 2455566
Q ss_pred HHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCC
Q 000555 951 HEFVEEVMRLVELDSL-RDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 1029 (1427)
Q Consensus 951 ~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~ 1029 (1427)
.+.+++..+.+++... .+..+ ..||||.+|||.|||.|..+|+||+|||||.|+|..+..+|.++|++++++|.
T Consensus 378 ~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ 452 (500)
T COG1129 378 RALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGK 452 (500)
T ss_pred HHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCC
Confidence 6778899999988633 23444 58999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 1030 TVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 1030 tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
+||+++-+.. |+...||||+||.+| +++-
T Consensus 453 ail~iSSElp-Ell~~~DRIlVm~~G-ri~~ 481 (500)
T COG1129 453 AILMISSELP-ELLGLSDRILVMREG-RIVG 481 (500)
T ss_pred EEEEEeCChH-HHHhhCCEEEEEECC-EEEE
Confidence 9999999985 799999999999975 5544
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=8.7e-52 Score=525.99 Aligned_cols=200 Identities=19% Similarity=0.256 Sum_probs=156.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|... +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 489999988662 12358999999999999999999999999999999999765 35799988652
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 984 (1427)
..+||++|+. .+.+++.++..+......+ ... .+.++++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 3589999975 3455666664322111111 111 245778999999974 455554 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEE-EccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI-YGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~-~~g~ 1063 (1427)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||+++|++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888764 349999999976 46778999999986 4655 7775
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 3
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=6.8e-51 Score=495.28 Aligned_cols=220 Identities=24% Similarity=0.301 Sum_probs=166.6
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCH
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV 245 (1427)
.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|.+.|+ +|+|...+. -+++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccH
Confidence 467999999999999999999999999999999999999886 999987652 268999999989989999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCCh---hHHHHHh-hhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSP---EIDAFMK-ASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~~-~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
.+.+.-+..-. .+..++..... ...+++ ..+++.. .....++..+.+++.++..||++.. +
T Consensus 84 ~~~v~~~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~----- 148 (530)
T COG0488 84 LDYVIEGFGEL------RELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-D----- 148 (530)
T ss_pred HHHHHhhhHHH------HHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-c-----
Confidence 99998754211 11111111111 001111 1111111 1123445666788899999999754 3
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+.+.+||||||.||+||++|+.+|++|||||||++||..+...+.+.|+++ .| |+|+ ++|++.-+-+.|++|+-+
T Consensus 149 ~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tvii-VSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 149 RPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVIV-VSHDRYFLDNVATHILEL 223 (530)
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEEE-EeCCHHHHHHHhhheEEe
Confidence 445569999999999999999999999999999999999977777777653 24 7777 478888888999999999
Q ss_pred eCCeE-EEecChHHHH
Q 000555 402 SEGHL-VYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~i-v~~G~~~~~~ 416 (1427)
+.|++ .|.|.++...
T Consensus 224 d~g~l~~y~Gny~~~~ 239 (530)
T COG0488 224 DRGKLTPYKGNYSSYL 239 (530)
T ss_pred cCCceeEecCCHHHHH
Confidence 99987 5778776554
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=4.8e-49 Score=453.53 Aligned_cols=455 Identities=21% Similarity=0.303 Sum_probs=352.4
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc----cceEEEEccCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV----QRTSAYISQTDNHIP 241 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~ 241 (1427)
...+++|||+++++||+.||+|.||||||||+++|.|.++|+ +|+|.++|+++.-..+ +.-||.|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 567999999999999999999999999999999999999987 9999999998865443 356999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
++||.|||..+..-... .. ..+ .....+++++.+..||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~---~~-----~~~------------------------~~~~~~i~~l~~~yGl~vdp~~~V~d 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG---GL-----IDR------------------------RQARARIKELSERYGLPVDPDAKVAD 140 (501)
T ss_pred ccchhhhhhhcCccccc---cc-----cCH------------------------HHHHHHHHHHHHHhCCCCCccceeec
Confidence 99999999987532100 00 000 01123477889999998777777665
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
||=||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++ .|+|||+. +|-..|+.+.||++.||
T Consensus 141 -----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~I-THKL~Ev~~iaDrvTVL 213 (501)
T COG3845 141 -----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIFI-THKLKEVMAIADRVTVL 213 (501)
T ss_pred -----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEE-eccHHHHHHhhCeeEEE
Confidence 999999999999999999999999999999999999999999999875 59999994 67789999999999999
Q ss_pred eCCeEEEecCh-HHHHHHHHhcCCCCCCCCChHHHHHHhcCccchhccccCCCCCCcCCCHHHHHHHHHhChhhHhHhhh
Q 000555 402 SEGHLVYQGPR-AEVLEFFESLGFQLPPRKGVADFLQEVTSKKDQAQYWADPSKPYVFLPVSEIAKAFKDSRFGKALKSS 480 (1427)
Q Consensus 402 ~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 480 (1427)
.+|+++-.-++ .+ .+.+++++
T Consensus 214 R~Gkvvgt~~~~~~--------------------------------------------~t~~ela~-------------- 235 (501)
T COG3845 214 RRGKVVGTVDPVAE--------------------------------------------TTEEELAE-------------- 235 (501)
T ss_pred eCCeEEeeecCCCC--------------------------------------------CCHHHHHH--------------
Confidence 99998643211 00 00000000
Q ss_pred ccCCCCCCCCCCCcccCCCcccCHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHhcccCCCCCCccchhhH
Q 000555 481 LSVPYDKSKCHPSALSKTRYAVSKWELFRTCFAREILLIQRHSFLYIFRTCQVAFVGFVACTMFLRTRLHPTDEKNGNLY 560 (1427)
Q Consensus 481 l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 560 (1427)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHhhhhhHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcCCchhHHH
Q 000555 561 LSCLFFAVVHMMFNGFSELPIMITRLPVFYKQRDNYFHPAWAWSVASWILRVPYSVLEAVVWSCVVYFTVGFAPETGRFF 640 (1427)
Q Consensus 561 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~rqr~~~~y~~~ay~la~~l~~ip~~~~~~~i~~~ivY~~~gl~~~~~~F~ 640 (1427)
+| +
T Consensus 236 ----------lM---------------------------------------------------------v---------- 238 (501)
T COG3845 236 ----------LM---------------------------------------------------------V---------- 238 (501)
T ss_pred ----------Hh---------------------------------------------------------c----------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHcHHHHHHHHHHHHhhc
Q 000555 641 RHMFLLFSLHQMALGLFRMMASIARDMVVANTFASSSLLIVFLMGGFIIPKESIKPWWSWAYWVSPLSYAQSAISVNEFA 720 (1427)
Q Consensus 641 ~~~l~l~~~~~~~~~l~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 720 (1427)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcccccccccccccccceecccccCCCCccchhhHHHHHHHHHHHHHHHHHHHHhcCcCCCccccccchhhhhHHhhhh
Q 000555 721 AARWKKKSVIGDNTIGYNVLHTHSLPSGDYWYWIGVGALLLYSLLFNSVVTLALAYLNPLRKSQVVIDDKEENSVKMAKQ 800 (1427)
Q Consensus 721 ~~~~~~~~~~~~~~~G~~~l~~~~~~~~~~~~w~~~g~ll~~~~~f~~l~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1427)
|.++. . ..
T Consensus 239 ---------------G~~v~-----------------------------------------------~--------~~-- 246 (501)
T COG3845 239 ---------------GREVV-----------------------------------------------L--------RV-- 246 (501)
T ss_pred ---------------CCccc-----------------------------------------------c--------cc--
Confidence 00000 0 00
Q ss_pred hhccccCCCCCCCCccCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhH
Q 000555 801 QFEINTTSAPESGKKKGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTT 880 (1427)
Q Consensus 801 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKST 880 (1427)
. . +. ...| +..++++|++...+ .....+++|||++++||++||.|-.|-|-+.
T Consensus 247 ----~--~-~~--~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~e 299 (501)
T COG3845 247 ----V--K-PP--STPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSE 299 (501)
T ss_pred ----c--c-CC--CCCC------CeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEecCCCCHHH
Confidence 0 0 00 0001 12478888875322 1245789999999999999999999999999
Q ss_pred HHhhhcCCCCCceeEEEEEECCccC-C---ccc-ccceEEEEccCC---CCCCCCCHHHHHHHHHhccCC----cCCCHH
Q 000555 881 LMDVLAGRKTGGYIEGDIKISGYPK-E---QST-FARISGYVEQND---IHSPQVTVEESLWFSANLRLS----KEVSKN 948 (1427)
Q Consensus 881 Ll~~L~g~~~~~~~~G~i~i~g~~~-~---~~~-~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~~----~~~~~~ 948 (1427)
|+.+|+|..+. .+|+|.++|.+. . ... .+.-+||||.|. -+.+.+|+.||+.+...-+.| .-.+..
T Consensus 300 L~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~ 377 (501)
T COG3845 300 LVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRR 377 (501)
T ss_pred HHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHH
Confidence 99999997643 349999999986 2 222 234589999986 356899999999877543211 124556
Q ss_pred HHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q 000555 949 QRHEFVEEVMRLVELDSLR-DALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT 1027 (1427)
Q Consensus 949 ~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~ 1027 (1427)
...+...++++.++..... +.. .+.||||++||+-+||+|.++|++|+..+||.|||..+.+.|.+.|.+.++.
T Consensus 378 ~i~~~a~~li~~fdVr~~~~~~~-----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~ 452 (501)
T COG3845 378 AIRKFARELIEEFDVRAPSPDAP-----ARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDA 452 (501)
T ss_pred HHHHHHHHHHHHcCccCCCCCcc-----hhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhc
Confidence 6778889999999887322 222 3689999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1028 GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1028 g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
|+.|++++-+.+ ++++.+|+|.||.+ |+++...+..
T Consensus 453 G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 453 GKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred CCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 999999999987 79999999999986 6777666654
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-44 Score=373.23 Aligned_cols=214 Identities=27% Similarity=0.390 Sum_probs=188.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
|+++|++.++ ++..+|+|||++|++||+++|+|||||||||||++|.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 6788887655 35789999999999999999999999999999999999765 35799999997542
Q ss_pred ----cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 ----QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
....|+.+|+|+|+..+||++||.||+.++...- ...++++.++...+.|+.+||.+.+|... ..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2356888999999999999999999999874322 34567777888999999999999999875 589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||||+|||||+.+|+++++|||||+|||+...++.+.+++++++|.|.||+||+... ..+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6778999999986 6777776
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 64
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=366.71 Aligned_cols=220 Identities=24% Similarity=0.410 Sum_probs=186.7
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc----ccccceEEEEccCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE----FHVQRTSAYISQTDNHIP 241 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~~~~~~~~yv~Q~~~~~~ 241 (1427)
+..+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|+++.. ...|+.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 467999999999999999999999999999999999999886 9999999976632 246789999999999999
Q ss_pred CCCHHHHHHHHHHh-cCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 242 ELTVRETFDFAARW-QGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
.+||.||+..+... ++. ++ .+.+.+..+.|+.+||.+.+|
T Consensus 91 HlTvleNv~lap~~v~~~-----------~k------------------------~eA~~~A~~lL~~VGL~~ka~---- 131 (240)
T COG1126 91 HLTVLENVTLAPVKVKKL-----------SK------------------------AEAREKALELLEKVGLADKAD---- 131 (240)
T ss_pred cchHHHHHHhhhHHHcCC-----------CH------------------------HHHHHHHHHHHHHcCchhhhh----
Confidence 99999999997532 221 11 111234567899999987665
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.++..|||||||||+|||||+.+|+++|+|||||+|||+...++.+.+++++++ |.|.++++ |...-.-+.+|||+.
T Consensus 132 -~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivVT-HEM~FAr~VadrviF 208 (240)
T COG1126 132 -AYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIVT-HEMGFAREVADRVIF 208 (240)
T ss_pred -hCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEEe-chhHHHHHhhheEEE
Confidence 456779999999999999999999999999999999999999999999999875 89999865 556778889999999
Q ss_pred EeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHH
Q 000555 401 LSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQE 438 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 438 (1427)
|++|+++.+|+++++. ..|.+....+|+..
T Consensus 209 md~G~iie~g~p~~~f--------~~p~~~R~~~FL~~ 238 (240)
T COG1126 209 MDQGKIIEEGPPEEFF--------DNPKSERTRQFLSK 238 (240)
T ss_pred eeCCEEEEecCHHHHh--------cCCCCHHHHHHHHh
Confidence 9999999999999873 45666666777754
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=392.46 Aligned_cols=200 Identities=20% Similarity=0.250 Sum_probs=153.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+.+.|+++.++. +..++++++|-+.+++.+|+|||||+|||||||++.|...+ ..|.|.-.-+
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H-- 452 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSH-- 452 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--cccccccccc--
Confidence 5789999875532 22689999999999999999999999999999999997653 4566543222
Q ss_pred CcccccceEEEEccC--CCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHH
Q 000555 906 EQSTFARISGYVEQN--DIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLR-DALVGFPGSSGLSTE 982 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~--~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgG 982 (1427)
..+++..|+ +.+--..++-|++.=. .+++.+.+.+..++..+||+... +..+ +.||+|
T Consensus 453 ------~~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p~-----~~LS~G 513 (614)
T KOG0927|consen 453 ------NKLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVPM-----SQLSDG 513 (614)
T ss_pred ------ccchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccch-----hhcccc
Confidence 123333443 2222345555654311 12234556788999999998444 4444 589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||+||.+|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++|+... +-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999988765 4689999999764 677789999999999999998
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 64
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=371.04 Aligned_cols=219 Identities=25% Similarity=0.349 Sum_probs=191.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
|+++||+..+... ..+...+|+|||++|++||+.||+|+||||||||++++.+... +.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5788887544321 1234579999999999999999999999999999999999765 35899999997654
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 Q------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. ...|+.+|+++|+..++...||+||+.|...+. ..++++++++|.++++.+||.+.++... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeia---g~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELA---GVPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhc---CCCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 3 346788999999999999999999999987765 3678899999999999999999888874 5899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
|||||||+|||||+.+|+||++|||||+|||.|...|.+.|+++-+ .|.||++++|++. -+-+.||||.||++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 9999999999999999999999999999999999999999999865 4999999999976 36778999999985 7999
Q ss_pred EccCCC
Q 000555 1060 YGGKLG 1065 (1427)
Q Consensus 1060 ~~g~~~ 1065 (1427)
..|+..
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999863
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=370.70 Aligned_cols=223 Identities=26% Similarity=0.364 Sum_probs=192.2
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDN 238 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~ 238 (1427)
...++|+|||++|++|++++|+|+||||||||++++.++..|+ +|+|.++|.++... ..|+.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3568999999999999999999999999999999999999987 99999999887654 24688999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
++...||.||++|..+..+.+ + .+.+.++.++|+.+||++.++
T Consensus 94 LLssrTV~~NvA~PLeiag~~-----------k------------------------~ei~~RV~elLelVgL~dk~~-- 136 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP-----------K------------------------AEIKQRVAELLELVGLSDKAD-- 136 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC-----------H------------------------HHHHHHHHHHHHHcCChhhhc--
Confidence 999999999999998876531 1 112346888999999986554
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+++.+|||||||||+|||||+.+|+|||.|||||+|||.|+..|+++|+++-++.|.||++.+|+ ++-+-+.||||
T Consensus 137 ---~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHE-m~Vvk~ic~rV 212 (339)
T COG1135 137 ---RYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHE-MEVVKRICDRV 212 (339)
T ss_pred ---cCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHhhhh
Confidence 45678999999999999999999999999999999999999999999999999999999997555 66778899999
Q ss_pred EEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000555 399 LLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEV 439 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 439 (1427)
.+|++|+++++|+..++. ..|.+.-..+|+.+.
T Consensus 213 avm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~ 245 (339)
T COG1135 213 AVLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGET 245 (339)
T ss_pred eEeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhh
Confidence 999999999999999884 345554445555543
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=359.43 Aligned_cols=210 Identities=25% Similarity=0.420 Sum_probs=190.0
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~ 242 (1427)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+. .+||.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999986 99999999998764 468999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||.|||.+-.++++..+ ++.+.+++++|+.+||+. ....++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k-----------------------------------~~i~~r~~ELl~lvgL~p---~~~~~R 131 (309)
T COG1125 90 LTVAENIATVPKLLGWDK-----------------------------------ERIKKRADELLDLVGLDP---SEYADR 131 (309)
T ss_pred ccHHHHHHhhhhhcCCCH-----------------------------------HHHHHHHHHHHHHhCCCH---HHHhhc
Confidence 999999999877765421 112345889999999974 236788
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
++.+|||||+|||.+||||+.+|+|+|||||+++|||-++.++.+.++++.++.++|+|++ +|+.+|.+.++|||++|+
T Consensus 132 yP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfV-THDidEA~kLadri~vm~ 210 (309)
T COG1125 132 YPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFV-THDIDEALKLADRIAVMD 210 (309)
T ss_pred CchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEE-ecCHHHHHhhhceEEEec
Confidence 8999999999999999999999999999999999999999999999999999999999996 678899999999999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|+++..+++++++.
T Consensus 211 ~G~i~Q~~~P~~il~ 225 (309)
T COG1125 211 AGEIVQYDTPDEILA 225 (309)
T ss_pred CCeEEEeCCHHHHHh
Confidence 999999999999974
No 51
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.5e-41 Score=386.64 Aligned_cols=224 Identities=30% Similarity=0.466 Sum_probs=193.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+.++|++..+. .++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~ 69 (293)
T COG1131 4 VIEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDV 69 (293)
T ss_pred eeeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeC
Confidence 356778876542 146799999999999999999999999999999999998763 689999999876
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+||++|++.++|.+||+|+|.|.+.++.... +...++++++++.++|.+.++..+ ++||+||
T Consensus 70 ~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~ 141 (293)
T COG1131 70 VKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGM 141 (293)
T ss_pred ccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHH
Confidence 54 4567889999999999999999999999999885432 445678999999999998666665 5899999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||++||+||+.+|++|||||||+|||+.++..+.+.|++++++| +||+++||+++ ++...||+|++|++ |++++.|
T Consensus 142 kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g 219 (293)
T COG1131 142 KQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEG 219 (293)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeC
Confidence 999999999999999999999999999999999999999999887 89999999986 68888999999986 6888888
Q ss_pred CCCCCchhHHHHHHh
Q 000555 1063 KLGVHSKTMIDYFQA 1077 (1427)
Q Consensus 1063 ~~~~~~~~~~~yf~~ 1077 (1427)
+. .++...+..
T Consensus 220 ~~----~~l~~~~~~ 230 (293)
T COG1131 220 TP----EELKEKFGG 230 (293)
T ss_pred CH----HHHHHhhcc
Confidence 65 345555443
No 52
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-41 Score=365.84 Aligned_cols=216 Identities=27% Similarity=0.443 Sum_probs=184.9
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++++++. + ++|+|||+++++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~~------------~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYGN------------R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEECC------------E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 5899999988741 2 59999999999999999999999999999999999765 3589999999986
Q ss_pred CcccccceEEEEccCC---CCCCCCCHHHHHHHHHhccC--CcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 906 EQSTFARISGYVEQND---IHSPQVTVEESLWFSANLRL--SKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~---~~~~~lTv~e~l~~~~~l~~--~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
....-+.++|||||.. .-+| +||+|-+..+..-+. -...+.+ .++.++++|+.+|+.+.+|..+| .||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~~~-d~~~v~~aL~~Vgm~~~~~r~i~-----~LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLNKK-DKEKVDEALERVGMEDLRDRQIG-----ELS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCCC-cCHHHHHHccCcccccccccccHH-HHHHHHHHHHHcCchhhhCCccc-----ccC
Confidence 6544356899999954 3344 899999987743322 1223333 36789999999999999999986 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||+||+.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||+|+.|+ +++++
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~ 218 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIA 218 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEe
Confidence 99999999999999999999999999999999999999999999988999999999997 5889999999996 47888
Q ss_pred ccCCCC
Q 000555 1061 GGKLGV 1066 (1427)
Q Consensus 1061 ~g~~~~ 1066 (1427)
.|+..+
T Consensus 219 ~G~~~~ 224 (254)
T COG1121 219 SGPPEE 224 (254)
T ss_pred ccChhh
Confidence 888753
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=358.28 Aligned_cols=213 Identities=26% Similarity=0.384 Sum_probs=188.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++|+||+..+ .++.+++|+|++|++||+++++|||||||||+|++|.+..+ +.+|+|.|||.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 5789987544 25679999999999999999999999999999999999876 35899999999875
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCH
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS--LRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 981 (1427)
. ..+||.+|||-|.-.+||++||.||+.+-..+. ..++++.+++++|+++.+||++ ++++. +++|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 467899999999999999999999999876664 5678888999999999999975 56665 368999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
||+|||.+||||+++|+||+||||+++|||.++..+++.++++.++ |+|||++|||.. +.+.+.|||.+|++ |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 999999999986 78899999999986 56666
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.+++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 5554
No 54
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.1e-41 Score=356.19 Aligned_cols=230 Identities=26% Similarity=0.371 Sum_probs=197.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.|++++|+.+. +.+.|++||+++|++||+++||||||+||||||++|.|...+ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 57899987654 467899999999999999999999999999999999998763 589999999986
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000555 906 EQ------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSG 978 (1427)
Q Consensus 906 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 978 (1427)
.+ ...++++|+++|+-.+|..+||+||+.|... -....+++..++.+..-++.+||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplr--e~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLR--EHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheehH--hhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 2457789999999999999999999998643 23456778888888899999999877 5544 468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||+|||++|||||+.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999875 999999999987 68999999999986 78
Q ss_pred EEEccCCCCCc----hhHHHHHHhcC
Q 000555 1058 VIYGGKLGVHS----KTMIDYFQALD 1079 (1427)
Q Consensus 1058 ~~~~g~~~~~~----~~~~~yf~~~~ 1079 (1427)
+++.|+..+.. --+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 99999875311 12667887653
No 55
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.5e-36 Score=407.77 Aligned_cols=216 Identities=23% Similarity=0.345 Sum_probs=186.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++++|+++.++ .+++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 4689999987653 123569999999999999999999999999999999999865 358999999988
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 905 KEQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 905 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+.++.++.++++++.++|.+..|..+ ++||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2346779999999999999999999999876642 233444567899999999998888876 489999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||++||+++ ++...+|++++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 5999999999975 56678999999986 6788888
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 64
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-41 Score=359.83 Aligned_cols=204 Identities=26% Similarity=0.394 Sum_probs=180.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+.++++++++. ...+|+|||++|.+||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 467888877653 36799999999999999999999999999999999998763 589999999987
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
. .-...+|||+|++.++|.+||+||+.++...+. .+.+++.+++++.++.+||.+..|... ..|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHH
Confidence 3 234568999999999999999999999987653 456667778999999999999998875 689999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
||+|||||+.+|+||+||||+++||+.|+..+++.+.++.+ .++|||++||+.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999865 5899999999986 677789999999864
No 57
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.3e-41 Score=368.07 Aligned_cols=228 Identities=27% Similarity=0.402 Sum_probs=190.9
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++.+|+++.++ ++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 368899988773 5679999999999999999999999999999999999766 3579999999986
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCc-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSK-EVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+|||||.....+.+||+|.+.++..-.... ....++..+.++++++.+++.+.+++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 457889999999998888999999999875432211 1112333447999999999999999987 48999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||+.|||||+++|+||+||||||+||...+.++++.++++.+ +|+|||+++||++. ...+||++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999984 7788999999986 57777
Q ss_pred ccCCCC--CchhHHHHH
Q 000555 1061 GGKLGV--HSKTMIDYF 1075 (1427)
Q Consensus 1061 ~g~~~~--~~~~~~~yf 1075 (1427)
.|++.+ ..+.+.+.|
T Consensus 220 ~G~p~evlT~e~l~~Vy 236 (258)
T COG1120 220 QGTPEEVLTEENLREVY 236 (258)
T ss_pred ecCcchhcCHHHHHHHh
Confidence 776542 223344454
No 58
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-41 Score=363.14 Aligned_cols=210 Identities=26% Similarity=0.453 Sum_probs=184.2
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCe---ecCccc-ccceEEEEccCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGY---KLDEFH-VQRTSAYISQTDNHIP 241 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~-~~~~~~yv~Q~~~~~~ 241 (1427)
...+++|||+.|+.||+++++|||||||||||++|||+..|+ +|.|.+||+ +.+... ..|.||||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 457899999999999999999999999999999999999987 999999999 554432 3588999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
.|||.+||.|+.+++... |+ ....+.+++++|+.+.|++ .++
T Consensus 91 HmtVa~NIAFGl~~~~~~--------------------p~-------------~~~~r~rv~elL~lvqL~~-----la~ 132 (345)
T COG1118 91 HMTVADNIAFGLKVRKER--------------------PS-------------EAEIRARVEELLRLVQLEG-----LAD 132 (345)
T ss_pred cchHHhhhhhcccccccC--------------------CC-------------hhhHHHHHHHHHHHhcccc-----hhh
Confidence 999999999998775221 00 0112345788999999975 667
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+++..|||||||||++||||+..|++||||||+++||...+..+-++|+++.++.|.|+|++ +|+..|++++||+|++|
T Consensus 133 ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfV-THD~eea~~ladrvvvl 211 (345)
T COG1118 133 RYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFV-THDQEEALELADRVVVL 211 (345)
T ss_pred cCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEE-eCCHHHHHhhcceEEEe
Confidence 88889999999999999999999999999999999999999999999999988878888885 57789999999999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|+|...||++|+.+
T Consensus 212 ~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 212 NQGRIEQVGPPDEVYD 227 (345)
T ss_pred cCCeeeeeCCHHHHhc
Confidence 9999999999999854
No 59
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=350.98 Aligned_cols=220 Identities=25% Similarity=0.341 Sum_probs=187.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++||+-.++ +++++|+|||++|++||++||+|||||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 478999876553 35789999999999999999999999999999999999765 3579999999764
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-----cCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000555 906 EQ------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-----KEVSKNQRHEFVEEVMRLVELDSLRDALVGFP 974 (1427)
Q Consensus 906 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 974 (1427)
.. ..+++.+||++|++.+.|.+||.+|+..+..-+.+ -....++.+..+-+.|+.+|+.+.+.+..+
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-- 146 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-- 146 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc--
Confidence 32 34678899999999999999999999877432222 122333444567788999999998887764
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
.|||||+|||+|||||+++|+|+|-|||+++|||.+++.||+.|+++.+ +|.|||++.||.+. ..++|||++-|+
T Consensus 147 ---~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 147 ---TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred ---cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 7999999999999999999999999999999999999999999999975 59999999999864 678899999998
Q ss_pred cCcEEEEccCCCC
Q 000555 1054 RGGRVIYGGKLGV 1066 (1427)
Q Consensus 1054 ~gg~~~~~g~~~~ 1066 (1427)
+ |+++|+||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 6 79999999854
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5e-40 Score=354.56 Aligned_cols=209 Identities=29% Similarity=0.447 Sum_probs=175.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++||+-.+... .....+|++||++|++||+++|||||||||||||++|.|...+ .+|.|.++|.+..
T Consensus 2 i~~~~v~k~y~~~---------~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~ 70 (226)
T COG1136 2 IELKNVSKIYGLG---------GEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLT 70 (226)
T ss_pred cEEeeeEEEeccC---------CcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcC
Confidence 3567776444321 1236799999999999999999999999999999999998764 5799999997654
Q ss_pred c------ccc-cceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCC
Q 000555 907 Q------STF-ARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRD-ALVGFPGSSG 978 (1427)
Q Consensus 907 ~------~~~-~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~ 978 (1427)
. ..+ ++.+|||+|+..+.|.+||+||+.+...+.. .+..++.+.++++++.+||.+..+ ... ..
T Consensus 71 ~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~---~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----~e 142 (226)
T COG1136 71 KLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAG---KSAGRRKRAAEELLEVLGLEDRLLKKKP-----SE 142 (226)
T ss_pred cCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcC---CChhHHHHHHHHHHHhcCChhhhccCCc-----hh
Confidence 2 123 4579999999999999999999998765542 222256677899999999986665 544 58
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
|||||||||+|||||+.+|+||+.||||.+||+.++..|++.++++.++ |+|||++||+| ++...+||++.|.+|+
T Consensus 143 LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 143 LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 9999999999999999999999999999999999999999999999765 99999999996 5788999999999864
No 61
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.8e-40 Score=379.72 Aligned_cols=211 Identities=34% Similarity=0.526 Sum_probs=185.3
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc--ccccceEEEEccCCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE--FHVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~~~~~~~~yv~Q~~~~~~~l 243 (1427)
.+.+|+|||+++++|++++|+||||||||||||+|+|++.|+ +|+|.++|++... ...++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999986 9999999998765 34578899999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+|||.|.+++++... .....+++++++.+||++.. ++.
T Consensus 94 T~~e~l~~~~~l~~~~~-----------------------------------~~~~~~~~~~l~~~~L~~~~-----~~~ 133 (293)
T COG1131 94 TVRENLEFFARLYGLSK-----------------------------------EEAEERIEELLELFGLEDKA-----NKK 133 (293)
T ss_pred cHHHHHHHHHHHhCCCh-----------------------------------hHHHHHHHHHHHHcCCchhh-----Ccc
Confidence 99999999998876421 00123478899999998632 455
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
+++||+||||||+||.||+++|+++||||||+|||+.++.++.+.|++++++.++||+++. |...++.++||+|++|++
T Consensus 134 ~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvliss-H~l~e~~~~~d~v~il~~ 212 (293)
T COG1131 134 VRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLST-HILEEAEELCDRVIILND 212 (293)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeC-CcHHHHHHhCCEEEEEeC
Confidence 6789999999999999999999999999999999999999999999999887558999975 556788999999999999
Q ss_pred CeEEEecChHHHHHHHH
Q 000555 404 GHLVYQGPRAEVLEFFE 420 (1427)
Q Consensus 404 G~iv~~G~~~~~~~~f~ 420 (1427)
|++++.|+.+++...+.
T Consensus 213 G~~~~~g~~~~l~~~~~ 229 (293)
T COG1131 213 GKIIAEGTPEELKEKFG 229 (293)
T ss_pred CEEEEeCCHHHHHHhhc
Confidence 99999999999776543
No 62
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-40 Score=348.13 Aligned_cols=211 Identities=26% Similarity=0.369 Sum_probs=183.2
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDN 238 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~ 238 (1427)
..+.||+|||++|++||+++|+||||||||||||.|.|+++|+ +|+|.++|+++... ..++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3568999999999999999999999999999999999999986 99999999987543 35688999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+|..+||+||+.|..+-... .|...++ ..+..-|+.+||.. .
T Consensus 96 LFssltV~eNVafplre~~~--------------------lp~~~i~--------------~lv~~KL~~VGL~~----~ 137 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK--------------------LPESLIR--------------ELVLMKLELVGLRG----A 137 (263)
T ss_pred cccccchhHhhheehHhhcc--------------------CCHHHHH--------------HHHHHHHHhcCCCh----h
Confidence 99999999999996543211 1111111 23455688899974 3
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+.+.++.+||||++||+++|||++.+|+++|+||||+||||.++..+.++|+++.+..+.|++++ +|+.++++..||++
T Consensus 138 ~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~V-THDl~s~~~i~Drv 216 (263)
T COG1127 138 AADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMV-THDLDSLLTIADRV 216 (263)
T ss_pred hhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEE-ECChHHHHhhhceE
Confidence 46788899999999999999999999999999999999999999999999999999999999996 56678999999999
Q ss_pred EEEeCCeEEEecChHHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~ 417 (1427)
++|.+|+|+.+|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999874
No 63
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=378.07 Aligned_cols=217 Identities=27% Similarity=0.426 Sum_probs=192.2
Q ss_pred eeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-cceEEEEccCCCCCCCCCHHH
Q 000555 169 ILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-QRTSAYISQTDNHIPELTVRE 247 (1427)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E 247 (1427)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..+ +|.+|+|+|+..++|.|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 999999999999999999999999999999999999986 9999999999998765 588999999999999999999
Q ss_pred HHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCC
Q 000555 248 TFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGV 327 (1427)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 327 (1427)
|+.|+.+.++..+ .+.+.+++++.+.|+|++.. ++.+++|
T Consensus 95 Niaf~Lk~~~~~k-----------------------------------~ei~~rV~eva~~L~l~~lL-----~r~P~~L 134 (338)
T COG3839 95 NIAFGLKLRGVPK-----------------------------------AEIDKRVKEVAKLLGLEHLL-----NRKPLQL 134 (338)
T ss_pred HhhhhhhhCCCch-----------------------------------HHHHHHHHHHHHHcCChhHH-----hcCcccC
Confidence 9999998876411 11234688999999998744 5567789
Q ss_pred ChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEE
Q 000555 328 SGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLV 407 (1427)
Q Consensus 328 SGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv 407 (1427)
||||||||++||||+.+|+++|||||+|.||+..+.++...|+++.++.+.|+|.+ +|+..|...++|+|.+|++|+|.
T Consensus 135 SGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYV-THDq~EAmtladri~Vm~~G~i~ 213 (338)
T COG3839 135 SGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYV-THDQVEAMTLADRIVVMNDGRIQ 213 (338)
T ss_pred ChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEE-cCCHHHHHhhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999999999999988888898886 56678999999999999999999
Q ss_pred EecChHHHHHHHHhcCCCCCCCCChHHHHH
Q 000555 408 YQGPRAEVLEFFESLGFQLPPRKGVADFLQ 437 (1427)
Q Consensus 408 ~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 437 (1427)
..|++.++.+ .|...-+|.|+-
T Consensus 214 Q~g~p~ely~--------~P~n~fVA~FiG 235 (338)
T COG3839 214 QVGTPLELYE--------RPANLFVAGFIG 235 (338)
T ss_pred ecCChHHHhh--------CccchhhhhhcC
Confidence 9999999853 466666666654
No 64
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.5e-40 Score=365.72 Aligned_cols=211 Identities=29% Similarity=0.439 Sum_probs=180.6
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~ 242 (1427)
.++||+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+. ...|.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999986 99999999988664 356899999999888889
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+|.+.++..-.. + +.... .+++...++++|+.+|+.+.++..
T Consensus 91 ~tV~d~V~~GR~p~~---~---~~~~~-------------------------~~~D~~~v~~aL~~~~~~~la~r~---- 135 (258)
T COG1120 91 LTVYELVLLGRYPHL---G---LFGRP-------------------------SKEDEEIVEEALELLGLEHLADRP---- 135 (258)
T ss_pred cEEeehHhhcCCccc---c---cccCC-------------------------CHhHHHHHHHHHHHhCcHHHhcCc----
Confidence 999999998732110 0 00000 111223578899999998766544
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
+..|||||||||.|||||+++|+||+||||||+||...+.++++.++++.++.|+|+|+++ |+.+....+||++++|+
T Consensus 136 -~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vl-HDlN~A~ryad~~i~lk 213 (258)
T COG1120 136 -VDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVL-HDLNLAARYADHLILLK 213 (258)
T ss_pred -ccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEE
Confidence 5569999999999999999999999999999999999999999999999988899999975 56678999999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998886
No 65
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=381.25 Aligned_cols=223 Identities=27% Similarity=0.424 Sum_probs=196.6
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-cceEEEEccCCCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-QRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lT 244 (1427)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||.||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999987 9999999999987654 688999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|+.+.++.. +.++ .+.++++.|+.++|++ .+++.+
T Consensus 94 V~~NVafGLk~~~~~--------------------~~~~--------------i~~rv~e~L~lV~L~~-----~~~R~p 134 (352)
T COG3842 94 VEENVAFGLKVRKKL--------------------KKAE--------------IKARVEEALELVGLEG-----FADRKP 134 (352)
T ss_pred HHHHhhhhhhhcCCC--------------------CHHH--------------HHHHHHHHHHHcCchh-----hhhhCh
Confidence 999999998744321 0011 1235888999999986 556777
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||++||||+.+|++||||||.|+||..-+.++..-|+++.++.|.|.|+. +|+..|.+.++|||++|++|
T Consensus 135 ~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~V-THDqeEAl~msDrI~Vm~~G 213 (352)
T COG3842 135 HQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYV-THDQEEALAMSDRIAVMNDG 213 (352)
T ss_pred hhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEE-ECCHHHHhhhccceEEccCC
Confidence 88999999999999999999999999999999999999999999999999999999996 56678999999999999999
Q ss_pred eEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000555 405 HLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEV 439 (1427)
Q Consensus 405 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 439 (1427)
+|...|+++++. ..|...-+|+|+-+.
T Consensus 214 ~I~Q~gtP~eiY--------~~P~~~fVA~FiG~~ 240 (352)
T COG3842 214 RIEQVGTPEEIY--------ERPATRFVADFIGES 240 (352)
T ss_pred ceeecCCHHHHh--------hCcchHHHHHHhCcc
Confidence 999999999984 467777788887653
No 66
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=355.26 Aligned_cols=192 Identities=26% Similarity=0.375 Sum_probs=170.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
..+|+|+|++|.+||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 67999999999999999999999999999999999999986 99999999887 34567899999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||+.|+.+.++... . +...++++.|+.+||... +++.+.+
T Consensus 91 ~NV~l~l~~~~~~~-----------~------------------------e~~~~a~~~L~~VgL~~~-----~~~~P~q 130 (248)
T COG1116 91 DNVALGLELRGKSK-----------A------------------------EARERAKELLELVGLAGF-----EDKYPHQ 130 (248)
T ss_pred hhheehhhccccch-----------H------------------------hHHHHHHHHHHHcCCcch-----hhcCccc
Confidence 99999987764210 0 011247789999999764 4667788
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
|||||||||+|||||+.+|+||+||||+++||+.|+.++.+.|.++.++.++||+++ +|..+|...++|||++|+++
T Consensus 131 LSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllV-THdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 131 LSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLV-THDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEE-eCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999999999999999988889999996 56778999999999999984
No 67
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-40 Score=345.57 Aligned_cols=216 Identities=25% Similarity=0.397 Sum_probs=180.8
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDNH 239 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~~ 239 (1427)
.+++|+|||++|++||+++|+|||||||||||++|.|+.+++ +|+|.+||.++... .+++.+||++|++.+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 457999999999999999999999999999999999999876 99999999877543 246889999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
.+.+||.+|+..+..-+.. ..+....-.++.+ +...-+.|+.+|+.+.+-+..
T Consensus 93 v~r~sv~~NVl~grl~~~s--~~~slfglfsk~d-------------------------k~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTS--TWRSLFGLFSKED-------------------------KAQALDALERVGILDKAYQRA 145 (258)
T ss_pred ccccHHHHHHHhhhcccch--HHHHHhCCCCHHH-------------------------HHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999987532211 0011111111221 123456789999987665544
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
+ .|||||+|||+|||||+.+|+|+|-|||+++||+.++.++++.|+++.++.|.|+|+++|| .+-..++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~-vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQ-VDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHHhhhe
Confidence 3 5999999999999999999999999999999999999999999999999999999998766 567789999999
Q ss_pred EEeCCeEEEecChHHHHH
Q 000555 400 LLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~~ 417 (1427)
-|++|+|+|.||++++.+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999998754
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-40 Score=357.74 Aligned_cols=205 Identities=32% Similarity=0.486 Sum_probs=184.8
Q ss_pred cceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCc---cCCc-ccccceEEEEccCCCCCCC
Q 000555 851 KLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY---PKEQ-STFARISGYVEQNDIHSPQ 926 (1427)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~~~~~~~ 926 (1427)
...+++|||+.|+.||++|++|||||||||||++|+|..+ +..|.|.+||. +.+. ....|.+|||+|+..+|++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999876 35899999999 5544 3446789999999999999
Q ss_pred CCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000555 927 VTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1427)
Q Consensus 927 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPT 1006 (1427)
+||.+|+.|+..++ ....++.+.+.+++++|+.+.|++..+... ..|||||||||++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998877 334567788889999999999999998875 689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1007 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
++||+.-+..+.+.|+++.+. |.|+|++|||+. ++++.+|||++|++ |+++..||..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999875 999999999986 79999999999986 6888888863
No 69
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-39 Score=350.74 Aligned_cols=197 Identities=29% Similarity=0.461 Sum_probs=170.2
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDN 238 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~ 238 (1427)
..++|+|+|++|++||+++|+|||||||||||++|.|+..|+ +|+|.++|.+++... .++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999999986 999999998886542 2467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
++|++||+||+.....+.+...+ ......+.+++.+||++..+
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~-----------------------------------~~~~~~~~l~~~lgl~~~~~-- 136 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG-----------------------------------RRKRAAEELLEVLGLEDRLL-- 136 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh-----------------------------------HHHHHHHHHHHhcCChhhhc--
Confidence 99999999999998766554110 01123677899999975432
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+..+..|||||||||+|||||+.+|+++|.||||.+||+.++..|++.++++.++.|+|+|+++|. +++.+.|||+
T Consensus 137 --~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd--~~lA~~~dr~ 212 (226)
T COG1136 137 --KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD--PELAKYADRV 212 (226)
T ss_pred --cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC--HHHHHhCCEE
Confidence 245667999999999999999999999999999999999999999999999998889999998665 4788999999
Q ss_pred EEEeCCeE
Q 000555 399 LLLSEGHL 406 (1427)
Q Consensus 399 ilL~~G~i 406 (1427)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 70
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-40 Score=336.62 Aligned_cols=201 Identities=29% Similarity=0.426 Sum_probs=184.1
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc--ccccceEEEEccCCCCCCCCCH
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ--STFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|.+||.+... ...++.+|.++.+.-++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 4589999999999999999999999999999999998763 58999999998643 4578899999988889999999
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
+|||.|.+.+. +.+..+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999998875 46677788899999999999999999986 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1010 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|..+...+.+.++++.+.|++||+++|... ++..+||++++|.+ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999888999999999975 68889999999997 688888875
No 71
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=370.67 Aligned_cols=215 Identities=29% Similarity=0.423 Sum_probs=191.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++.++. +..+|+|||++|+.||.++|+|||||||||||++|||..+ +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 478888876552 1228999999999999999999999999999999999876 4589999999987
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
+. ...+|.+|+|+|+..++|++||+||+.|+.+++ ..++++.+++|+++.+.++|++..|++. ++||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~---~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLR---GVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhC---CCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 66 456788999999999999999999999998775 4567788899999999999999999885 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. +...++||+.+|++ |++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~~-G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMND-GRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEeC-CeeeecCC
Confidence 9999999999999999999999999999999999999998764 899999999974 78889999999985 78888887
Q ss_pred CC
Q 000555 1064 LG 1065 (1427)
Q Consensus 1064 ~~ 1065 (1427)
+.
T Consensus 218 p~ 219 (338)
T COG3839 218 PL 219 (338)
T ss_pred hH
Confidence 63
No 72
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-40 Score=334.36 Aligned_cols=207 Identities=26% Similarity=0.329 Sum_probs=184.1
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~l 243 (1427)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+.... ..++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999987 99999999887432 4578999999777899999
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.|.+++.+. ++. +.+.+++.+.+.|+|..|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l-----------~~~------------------------~~kari~~l~k~l~l~~~~~rRv~~-- 133 (245)
T COG4555 91 TARENLKYFARLNGL-----------SRK------------------------EIKARIAELSKRLQLLEYLDRRVGE-- 133 (245)
T ss_pred hHHHHHHHHHHHhhh-----------hhh------------------------HHHHHHHHHHHHhChHHHHHHHHhh--
Confidence 999999998887654 111 1223578899999999999998875
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..|++||.+ +|..+|+..+||+|++|++
T Consensus 134 ---~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k-~egr~viFS-SH~m~EvealCDrvivlh~ 208 (245)
T COG4555 134 ---FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK-NEGRAVIFS-SHIMQEVEALCDRVIVLHK 208 (245)
T ss_pred ---hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh-cCCcEEEEe-cccHHHHHHhhheEEEEec
Confidence 99999999999999999999999999999999999999999999974 459999998 5778999999999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|++++.|+.+++..
T Consensus 209 Gevv~~gs~~~l~~ 222 (245)
T COG4555 209 GEVVLEGSIEALDA 222 (245)
T ss_pred CcEEEcCCHHHHHH
Confidence 99999999998764
No 73
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=335.96 Aligned_cols=217 Identities=26% Similarity=0.367 Sum_probs=184.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCC---CCceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 902 (1427)
.++++|++..+. ++++|+|||+.|++++++|++|||||||||||++|.+.. ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 578899987663 567999999999999999999999999999999998853 3446789999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGS 976 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 976 (1427)
.++-. ..+|+.+|+|+|.+.-|| +|++||+.|+.++.... +++.++.|++.|+...|.+ .+|.+-. .+
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~---~~~ldeiVe~sLk~AaLWdEVKDrL~~--sa 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIK---DKELDEIVESSLKKAALWDEVKDRLHK--SA 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccc---hHHHHHHHHHHHHHhHhHHHhHHHhhC--Cc
Confidence 87533 357899999999999999 99999999998775332 2677788999998888764 3444422 23
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.+|||||+|||||||||+.+|+|||||||||+|||.+...|-+++.+++ +.-|||++||.+. ......|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4689999999875 56778899999986 5
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
+++..|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 88888875
No 74
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.4e-39 Score=328.63 Aligned_cols=212 Identities=28% Similarity=0.370 Sum_probs=183.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
|+|+||+..|. .+ .++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~-----------~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP-----------GG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC-----------CC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 67888875543 23 569999999999999999999999999999999999655 35799999999864
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 Q------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. .-+||++|+|+||..+.++.||+||+.|..... ..++.+.+++|.++|+.+||.+.++.+. ..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~---G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVI---GKPPREIRRRVSEVLDLVGLKHKARALP-----SQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhcc---CCCHHHHHHHHHHHHHHhccchhhhcCc-----cccC
Confidence 3 235789999999999999999999999987665 4566778889999999999999888764 6899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gg~~~ 1059 (1427)
|||+||++||||++.+|++|+.||||-+|||..+..||+++.++...|.|||+.||+. ++.+. -.+++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999988899999999994 45554 467888886 5666
Q ss_pred EccC
Q 000555 1060 YGGK 1063 (1427)
Q Consensus 1060 ~~g~ 1063 (1427)
.+..
T Consensus 217 ~d~~ 220 (223)
T COG2884 217 RDES 220 (223)
T ss_pred eccc
Confidence 5543
No 75
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-39 Score=350.60 Aligned_cols=208 Identities=30% Similarity=0.455 Sum_probs=174.1
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCC--CCCCCCCH
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTD--NHIPELTV 245 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~--~~~~~lTV 245 (1427)
++|+|||+++++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+.+||||||.. .+-...||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 5999999999999999999999999999999999999986 999999998877665567899999943 23334799
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+|.+..+..-+.. +..... +++...++++|+.+|+.+..|..+|
T Consensus 95 ~d~V~~g~~~~~g------~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~----- 138 (254)
T COG1121 95 KDVVLLGRYGKKG------WFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIG----- 138 (254)
T ss_pred HHHHHccCccccc------cccccc-------------------------HHHHHHHHHHHHHcCchhhhCCccc-----
Confidence 9999886321110 111111 1123458899999999987666665
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||+|||-|||||+++|++|+|||||+|+|+.++..|.++|+++.++ |+||+++ +|+...+.++||+|+.|+ ++
T Consensus 139 ~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~v-tHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 139 ELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMV-THDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred ccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEE-eCCcHHhHhhCCEEEEEc-Ce
Confidence 59999999999999999999999999999999999999999999999887 9999995 778889999999999996 57
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999998764
No 76
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=370.06 Aligned_cols=215 Identities=29% Similarity=0.427 Sum_probs=192.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++||+..+ ++..+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 57899987554 25679999999999999999999999999999999999876 3589999999987
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...+|.+|+|+|+..+||++||+||+.|+..++ ....+++..++++++++.++|++..+... ..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 65 345788999999999999999999999998743 34456778889999999999999988876 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++||||||.|+||..-+..++.-++++.+ .|.|.|++|||.. +...+.|||.+|++ |+++..|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 999999999999999999999999999999999999999875 4999999999975 78889999999986 78888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 6
No 77
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-39 Score=334.11 Aligned_cols=222 Identities=23% Similarity=0.387 Sum_probs=181.4
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDN 238 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~ 238 (1427)
++.+|+|||+.|+++++||++|||||||||||+++....+ |..+++|+|.++|+++.+. .+|+.+|.|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 4569999999999999999999999999999999987654 3457899999999988543 46899999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcc-cccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDL-CSET 317 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t 317 (1427)
-|| +|++||+.|+.+..+... . +.| +.++..|+..+|.+ ..|.
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~-------------------~ld--------------eiVe~sLk~AaLWdEVKDr 142 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--K-------------------ELD--------------EIVESSLKKAALWDEVKDR 142 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--H-------------------HHH--------------HHHHHHHHHhHhHHHhHHH
Confidence 999 899999999999877521 1 111 23455555555532 1221
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
. ++...+|||||+||++|||||+.+|+|||||||||+|||-++..|.+++.++.+ .-|||++ +|.+.+..+..|+
T Consensus 143 -L-~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviV-THnmqQAaRvSD~ 217 (253)
T COG1117 143 -L-HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIV-THNMQQAARVSDY 217 (253)
T ss_pred -h-hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEE-eCCHHHHHHHhHh
Confidence 1 223457999999999999999999999999999999999999999999999864 5788885 5678899999999
Q ss_pred EEEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFL 436 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 436 (1427)
..++..|++++.|+.+++. ..|.++...||+
T Consensus 218 taFf~~G~LvE~g~T~~iF--------~~P~~~~TedYi 248 (253)
T COG1117 218 TAFFYLGELVEFGPTDKIF--------TNPKHKRTEDYI 248 (253)
T ss_pred hhhhcccEEEEEcCHHhhh--------cCccHHHHHHHh
Confidence 9999999999999999883 456666666654
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.2e-38 Score=365.64 Aligned_cols=214 Identities=29% Similarity=0.416 Sum_probs=186.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 588999987663 3469999999999999999999999999999999999865 3589999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+|||+|++.+++.+||+||+.|.+.++ ..+..+..++++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYF---GLSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 235678999999999999999999999876543 2334444566889999999998888877 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 67788999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 5
No 79
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-38 Score=382.15 Aligned_cols=215 Identities=24% Similarity=0.443 Sum_probs=180.2
Q ss_pred cCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccC
Q 000555 160 FKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQT 236 (1427)
Q Consensus 160 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~ 236 (1427)
.++.+++.+||+|+|++|+|||.+||+|||||||||+.++|..+++|+ +|+|++||+|+.+.+ +++.||+|.|+
T Consensus 474 aYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QE 550 (716)
T KOG0058|consen 474 AYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQE 550 (716)
T ss_pred ecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeecc
Confidence 466777889999999999999999999999999999999999999986 999999999998765 57899999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 237 DNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 237 ~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
|.+|.. ||+|||.|+.. .. .. +++.+..+.+ .. .+. ..++++.+|
T Consensus 551 PvLFs~-sI~eNI~YG~~--~~---t~---e~i~~AAk~A------Na-----------------h~F---I~~~p~gY~ 595 (716)
T KOG0058|consen 551 PVLFSG-SIRENIAYGLD--NA---TD---EEIEAAAKMA------NA-----------------HEF---ITNFPDGYN 595 (716)
T ss_pred ceeecc-cHHHHHhcCCC--CC---CH---HHHHHHHHHh------Ch-----------------HHH---HHhCccccc
Confidence 988865 99999999753 11 11 1111111111 11 122 235888999
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
|.||+++. .||||||||++|||||+.+|+||||||.||+||+++...+.+.|.+..+ ++||++.- | +-.+.+.+|
T Consensus 596 T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIA-H-RLSTV~~Ad 670 (716)
T KOG0058|consen 596 TVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIA-H-RLSTVRHAD 670 (716)
T ss_pred cccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEe-h-hhhHhhhcc
Confidence 99999987 5999999999999999999999999999999999999999999998875 58888743 3 457889999
Q ss_pred cEEEEeCCeEEEecChHHHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~~ 417 (1427)
+|+++++|++++.|+++|+++
T Consensus 671 ~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 671 QIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEEEcCCeEEecccHHHHhh
Confidence 999999999999999999975
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.2e-37 Score=365.20 Aligned_cols=217 Identities=25% Similarity=0.338 Sum_probs=185.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.+ .....+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 6889998766311 113469999999999999999999999999999999999866 35899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. ..++.+||++|+..+++..||+||+.+..... ..+.++..+++.++++.+||.+..|... ..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23668999999999999999999999876432 2345566677899999999998888765 5899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999975 46788999999986 6888
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 88875
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.3e-37 Score=364.68 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=177.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999986 999999999886532 356899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+..||+||+.|+.+..+.. +. +...++.++++.+||.+..|
T Consensus 95 ~~~tv~eni~~~~~~~~~~-----------~~------------------------~~~~~v~e~l~~vgL~~~~~---- 135 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP-----------KD------------------------EIKRKVTELLALVGLGDKHD---- 135 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCchhhh----
Confidence 9999999999976543220 00 01123677899999986544
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+.+..|||||||||+|||||+.+|++|+|||||||||+.++..+++.|+++.++.+.|+|+++ |..+.+.++||+|++
T Consensus 136 -~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliT-H~~~~v~~~~d~v~v 213 (343)
T TIGR02314 136 -SYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLIT-HEMDVVKRICDCVAV 213 (343)
T ss_pred -CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEE
Confidence 455679999999999999999999999999999999999999999999999877789999965 556778899999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+++++.
T Consensus 214 l~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 214 ISNGELIEQGTVSEIF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999999874
No 82
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-38 Score=332.90 Aligned_cols=206 Identities=27% Similarity=0.341 Sum_probs=179.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc----cccceEEEEccCC--CCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF----HVQRTSAYISQTD--NHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~~--~~~ 240 (1427)
.++|+|||+++.+||.++|+|+||||||||.++|+|..+|+ +|+|+++|.+.... ...+.+-+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 37999999999999999999999999999999999999986 99999999877554 2467899999997 477
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
|..||++.|.-+.+..+.. +.+.++.++|+.+||+. .+-
T Consensus 97 P~~tv~~~l~Epl~~~~~~-------------------------------------~~~~~i~~~L~~VgL~~----~~l 135 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLS-------------------------------------KSQQRIAELLDQVGLPP----SFL 135 (252)
T ss_pred cchhHHHHHhhhhccCCcc-------------------------------------HHHHHHHHHHHHcCCCH----HHH
Confidence 8999999997765543221 01122677899999975 355
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
++.+.+|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.++++.|.|+ +.|+..-+..+||||++
T Consensus 136 ~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~-IsHdl~~v~~~cdRi~V 214 (252)
T COG1124 136 DRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLF-ISHDLALVEHMCDRIAV 214 (252)
T ss_pred hcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEE-EeCcHHHHHHHhhheee
Confidence 67788899999999999999999999999999999999999999999999999998999998 46788899999999999
Q ss_pred EeCCeEEEecChHHHHH
Q 000555 401 LSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~~ 417 (1427)
|++|++++.++.+++..
T Consensus 215 m~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 215 MDNGQIVEIGPTEELLS 231 (252)
T ss_pred eeCCeEEEeechhhhhc
Confidence 99999999999999864
No 83
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=349.70 Aligned_cols=214 Identities=24% Similarity=0.362 Sum_probs=180.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 65 (235)
T cd03261 1 IELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDIS 65 (235)
T ss_pred CeEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35788877652 24689999999999999999999999999999999998653 5799999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 Q------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. ..+++.++|++|++.+++.+||+||+.+...... ..+.++..+.++++++.++|.+..++.+ ..||
T Consensus 66 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (235)
T cd03261 66 GLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELS 138 (235)
T ss_pred ccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCC
Confidence 3 2345679999999999999999999988643221 2234445567889999999988777765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 139 gG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~ 216 (235)
T cd03261 139 GGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIV 216 (235)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEE
Confidence 99999999999999999999999999999999999999999998764 899999999976 46778999999986 6788
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
+.|+.
T Consensus 217 ~~g~~ 221 (235)
T cd03261 217 AEGTP 221 (235)
T ss_pred EecCH
Confidence 88764
No 84
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-38 Score=380.75 Aligned_cols=219 Identities=26% Similarity=0.419 Sum_probs=183.9
Q ss_pred CCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECC
Q 000555 823 QPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISG 902 (1427)
Q Consensus 823 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 902 (1427)
-...|+|+||+|.|+.. ++.++|||+||+|+|||.+|||||||+||||+.+.|.+..+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 34579999999999764 35679999999999999999999999999999999998766 4589999999
Q ss_pred ccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHH---HcCCcccccccccCCCC
Q 000555 903 YPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMR---LVELDSLRDALVGFPGS 976 (1427)
Q Consensus 903 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~---~l~L~~~~~~~vg~~~~ 976 (1427)
+|+++ ..+|+++|+|.|+|.+|. -||+||+.|+.. ..++++....++..-. ..++.+-.||.||..|.
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 99765 457899999999999986 599999999854 3344433222221111 13667779999997664
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.||||||||++|||||++||+||+|||+||+||++++..|+++|.++.+ ++|||+++|+.+ +.+.+|+|+|+++ |
T Consensus 604 -qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G 678 (716)
T KOG0058|consen 604 -QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-G 678 (716)
T ss_pred -cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-C
Confidence 6999999999999999999999999999999999999999999988765 699999999975 6788999999986 7
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
+++..|..
T Consensus 679 ~V~E~G~h 686 (716)
T KOG0058|consen 679 RVVEMGTH 686 (716)
T ss_pred eEEecccH
Confidence 89998864
No 85
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.7e-37 Score=366.54 Aligned_cols=214 Identities=26% Similarity=0.385 Sum_probs=187.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++.+++ .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478999987653 3468999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+.++..++++++++.++|.+..+... ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 234577999999999999999999999986543 2345566778999999999999888765 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 68889999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 5
No 86
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.2e-38 Score=315.27 Aligned_cols=201 Identities=26% Similarity=0.389 Sum_probs=175.0
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-cceEEEEccCCCCCCCCCHHHHHH
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-QRTSAYISQTDNHIPELTVRETFD 250 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1427)
..++.|++||++||+||||||||||||.|+|...|. +|+|.+||++.+...+ .|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 468899999999999999999999999999999886 9999999999876554 577999999999999999999999
Q ss_pred HHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChH
Q 000555 251 FAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGG 330 (1427)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 330 (1427)
++..- +.+ ++.. .+++++.++..+||..+.+ +.+.+||||
T Consensus 94 LGl~P-----~Lk-----L~a~-------------------------~r~~v~~aa~~vGl~~~~~-----RLP~~LSGG 133 (231)
T COG3840 94 LGLSP-----GLK-----LNAE-------------------------QREKVEAAAAQVGLAGFLK-----RLPGELSGG 133 (231)
T ss_pred ccCCc-----ccc-----cCHH-------------------------HHHHHHHHHHHhChhhHhh-----hCccccCch
Confidence 86321 110 1111 1234788999999987654 456679999
Q ss_pred HhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEec
Q 000555 331 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQG 410 (1427)
Q Consensus 331 qkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G 410 (1427)
|||||++||+|+++.+|++||||+|+||+.-+.+....+.+++.+.+.|++|++||| ++...++|+++++++|+|.++|
T Consensus 134 qRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~-~Da~~ia~~~~fl~~Gri~~~g 212 (231)
T COG3840 134 QRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHP-EDAARIADRVVFLDNGRIAAQG 212 (231)
T ss_pred HHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCH-HHHHHhhhceEEEeCCEEEeec
Confidence 999999999999999999999999999999999999999999999999999988776 5788999999999999999999
Q ss_pred ChHHHH
Q 000555 411 PRAEVL 416 (1427)
Q Consensus 411 ~~~~~~ 416 (1427)
+.++..
T Consensus 213 ~~~~~~ 218 (231)
T COG3840 213 STQELL 218 (231)
T ss_pred cHHHHh
Confidence 998875
No 87
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=366.20 Aligned_cols=215 Identities=27% Similarity=0.380 Sum_probs=186.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i 68 (356)
T PRK11650 3 GLKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVV 68 (356)
T ss_pred EEEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 378899887652 13468999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...++.+|||+|++.++|++||+||+.|....+ ..+..+..++++++++.++|.+..+..+ ..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 140 (356)
T PRK11650 69 NELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQR 140 (356)
T ss_pred CCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHH
Confidence 43 223578999999999999999999999986532 2345556678899999999999888876 48999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+
T Consensus 141 QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~ 218 (356)
T PRK11650 141 QRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGT 218 (356)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECC
Confidence 9999999999999999999999999999999999999998765 899999999985 68889999999985 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 219 ~ 219 (356)
T PRK11650 219 P 219 (356)
T ss_pred H
Confidence 5
No 88
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.1e-38 Score=315.30 Aligned_cols=196 Identities=27% Similarity=0.387 Sum_probs=172.6
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000555 857 NVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-STFARISGYVEQNDIHSPQVTVEESLWF 935 (1427)
Q Consensus 857 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~ 935 (1427)
..++.|.+||++||+||||||||||||.|+|...+ .+|+|.|||.+... ....|-+++++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 57889999999999999999999999999998764 58999999998654 3466779999999999999999999987
Q ss_pred HHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000555 936 SANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1015 (1427)
Q Consensus 936 ~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~ 1015 (1427)
+..-. -..+. +.+++++.++..+||..+.+.+. ..||||||||+++||+|+++-+||+||||+|+|||.-+.
T Consensus 95 Gl~P~--LkL~a-~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPG--LKLNA-EQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCcc--cccCH-HHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 64322 12333 34567899999999999998876 489999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1016 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1016 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
++..++.++++ ++.|++++||+|+ +.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999975 5899999999997 78899999999986 799999975
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=363.78 Aligned_cols=214 Identities=26% Similarity=0.418 Sum_probs=187.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 578999987652 2458999999999999999999999999999999999876 3589999999876
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQS-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
... ..+|.+|||+|+..++|++||+||+.|+...+ ..+..+..++++++++.++|.+..+... ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKML---GVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 23578999999999999999999999986543 2345666778999999999998887765 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |+|+|++||+++ ++...+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 68889999999986 67888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 5
No 90
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.3e-37 Score=364.35 Aligned_cols=208 Identities=20% Similarity=0.308 Sum_probs=178.6
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-------cceEEEEccCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-------QRTSAYISQTDN 238 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~ 238 (1427)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 356999999999999999999999999999999999999986 9999999999865432 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+++.+||+||+.|+.+..+.. +. +...++.++++.+||+...+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~vgL~~~~~-- 124 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWP-----------EQ------------------------ERKEKALELLKLVGLEEYEH-- 124 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHhcCCchhhh--
Confidence 999999999999986654321 00 01123677899999975444
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+.+..|||||||||+|||||+.+|+|+||||||+|||+.++..+.+.|+++.++.++|+|+++ |...++.++||+|
T Consensus 125 ---~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vT-Hd~~ea~~~~drI 200 (363)
T TIGR01186 125 ---RYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFIT-HDLDEAIRIGDRI 200 (363)
T ss_pred ---CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEE
Confidence 445579999999999999999999999999999999999999999999998766689999964 5567889999999
Q ss_pred EEEeCCeEEEecChHHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~ 417 (1427)
++|++|+++..|+++++..
T Consensus 201 ~vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 201 VIMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEEeCCEEEeeCCHHHHHh
Confidence 9999999999999998763
No 91
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-38 Score=344.89 Aligned_cols=207 Identities=26% Similarity=0.397 Sum_probs=181.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecC----cccccceEEEEccCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLD----EFHVQRTSAYISQTD-NHIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~~-~~~~ 241 (1427)
..+|+|+|+.+++|+.++|+||||||||||+++|+|++.|. +|+|.++|.+.. ....++.+|||+|+| ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999986 899999999875 335678999999985 5677
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
..||.|.++|+.+..+.+. ++ .+.+++++++.+||.+.. +
T Consensus 94 ~~tV~~evafg~~n~g~~~---------------------~e--------------~~~rv~~~l~~vgl~~~~-----~ 133 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR---------------------EE--------------IEERVAEALELVGLEELL-----D 133 (235)
T ss_pred cCcHHHHHhhchhhcCCCH---------------------HH--------------HHHHHHHHHHHcCchhhc-----c
Confidence 8899999999988776521 00 123578899999998654 4
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+.+..|||||||||+||.+|+.+|++++|||||||||+..+.++++.++++.++.++|+|++ +|....+.+++|++++|
T Consensus 134 r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~-tHd~~~~~~~ad~v~vl 212 (235)
T COG1122 134 RPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIV-THDLELVLEYADRVVVL 212 (235)
T ss_pred CCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE-eCcHHHHHhhCCEEEEE
Confidence 55677999999999999999999999999999999999999999999999988777899986 56788999999999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|+++++|+++++.+
T Consensus 213 ~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 213 DDGKILADGDPAEIFN 228 (235)
T ss_pred ECCEEeecCCHHHHhh
Confidence 9999999999988764
No 92
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.8e-37 Score=363.94 Aligned_cols=214 Identities=27% Similarity=0.383 Sum_probs=186.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeE--EEEEECCc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIE--GDIKISGY 903 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 903 (1427)
.++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 478999987663 24589999999999999999999999999999999997653 46 99999998
Q ss_pred cCCc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 904 PKEQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 904 ~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
+... ...++.+|||+|+..++|++||+||+.|....+ ..+..+..++++++++.++|++..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 224567999999999999999999999986543 2445566678999999999999888876 589999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999875 799999999986 67888999999986 68888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 8875
No 93
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=365.55 Aligned_cols=207 Identities=26% Similarity=0.380 Sum_probs=178.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999876 999999999886543 34789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+.++.. +. +...+++++++.+||++.. ++.++
T Consensus 94 ~eNi~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gL~~~~-----~~~~~ 133 (356)
T PRK11650 94 RENMAYGLKIRGMP-----------KA------------------------EIEERVAEAARILELEPLL-----DRKPR 133 (356)
T ss_pred HHHHHhHHhhcCCC-----------HH------------------------HHHHHHHHHHHHcCChhHh-----hCChh
Confidence 99999986543210 00 0112467889999997644 45566
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++||||||||+||+.++..+.+.|+++.++.+.|+|+++| ...++.+++|+|++|++|+
T Consensus 134 ~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTH-d~~ea~~l~D~i~vl~~G~ 212 (356)
T PRK11650 134 ELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTH-DQVEAMTLADRVVVMNGGV 212 (356)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999998777899998754 5578999999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
++..|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (356)
T PRK11650 213 AEQIGTPVEVYE 224 (356)
T ss_pred EEEECCHHHHHh
Confidence 999999998753
No 94
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.5e-38 Score=321.41 Aligned_cols=206 Identities=27% Similarity=0.409 Sum_probs=182.4
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccc----cceEEEEccCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTF----ARISGYVEQNDIHSP 925 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~----~~~~gyv~Q~~~~~~ 925 (1427)
+++++++|||+.|++||++|++|||||||||.+.++.|... +.+|+|.+||.+++.... +.-+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 56789999999999999999999999999999999999765 357999999998876432 234899999999999
Q ss_pred CCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000555 926 QVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEP 1005 (1427)
.+||+||+......+.. +....++++.++++++.+++.++++..- ..||||||+|+-|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999887766531 2233466677899999999999999875 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1006 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
++|+||.+...|+++++.+++.|..|++|-|..+ ++...+||.+++.+ |++...|.+.
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999987 78999999999997 6888888763
No 95
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=363.86 Aligned_cols=206 Identities=23% Similarity=0.403 Sum_probs=179.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-cceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-QRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1427)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999986 9999999998865443 4789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+.++... . +...+++++++.+||.+.. ++.++
T Consensus 96 ~eNi~~~l~~~~~~~-----------~------------------------~~~~~v~~~l~~~gl~~~~-----~r~~~ 135 (351)
T PRK11432 96 GENVGYGLKMLGVPK-----------E------------------------ERKQRVKEALELVDLAGFE-----DRYVD 135 (351)
T ss_pred HHHHHHHHhHcCCCH-----------H------------------------HHHHHHHHHHHHcCCchhh-----cCChh
Confidence 999999876543210 0 0112467889999997543 55567
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.++.++|+|+++ |...++.+++|+|++|++|+
T Consensus 136 ~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vT-Hd~~e~~~laD~i~vm~~G~ 214 (351)
T PRK11432 136 QISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVT-HDQSEAFAVSDTVIVMNKGK 214 (351)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999999877789999864 55678999999999999999
Q ss_pred EEEecChHHHH
Q 000555 406 LVYQGPRAEVL 416 (1427)
Q Consensus 406 iv~~G~~~~~~ 416 (1427)
++..|+++++.
T Consensus 215 i~~~g~~~~~~ 225 (351)
T PRK11432 215 IMQIGSPQELY 225 (351)
T ss_pred EEEEcCHHHHH
Confidence 99999999875
No 96
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.3e-37 Score=364.13 Aligned_cols=207 Identities=25% Similarity=0.405 Sum_probs=179.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .+|.++||+|+..+||.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999886 999999999886533 35789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+.++.. +.+ ...+++++++.+||++..+ +.+.
T Consensus 94 ~eNi~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~l~L~~~~~-----~~~~ 133 (353)
T TIGR03265 94 ADNIAYGLKNRGMG-----------RAE------------------------VAERVAELLDLVGLPGSER-----KYPG 133 (353)
T ss_pred HHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCCCchhh-----CChh
Confidence 99999986543220 000 1124678999999986544 4566
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.++.+.|+|+++ |...++..++|+|++|++|+
T Consensus 134 ~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vT-Hd~~ea~~l~d~i~vl~~G~ 212 (353)
T TIGR03265 134 QLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVT-HDQEEALSMADRIVVMNHGV 212 (353)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999999877789999875 55578899999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
+++.|+++++.+
T Consensus 213 i~~~g~~~~~~~ 224 (353)
T TIGR03265 213 IEQVGTPQEIYR 224 (353)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 97
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.9e-37 Score=360.16 Aligned_cols=214 Identities=27% Similarity=0.401 Sum_probs=185.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 589999987663 34699999999999999999999999999999999998663 589999999876
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+||++|++.+++.+||+|++.+.+.+. ..+..+..+.++++++.++|.+..++.++ +|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADARVS-----DLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHHH
Confidence 43 234677999999999999999999998765443 12333445567889999999988888874 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 67788999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 5
No 98
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-37 Score=340.46 Aligned_cols=210 Identities=30% Similarity=0.440 Sum_probs=176.0
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 5678876552 2468999999999999999999999999999999999765 357999999987643
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 908 -STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 908 -~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
...++.++|++|++.+++.+|++||+.+..... ....+...+.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 223467999999999999999999998765332 1233344556889999999988777765 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999975 46778999999986 5666543
No 99
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.8e-37 Score=341.05 Aligned_cols=207 Identities=26% Similarity=0.344 Sum_probs=175.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 578898876631 12458999999999999999999999999999999999765 35799999998753
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. .+++.++|++|++.+++.+||+||+.+....+ ....++..+.++++++.++|.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRII---GVPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 24567999999999999999999998875432 1223344567889999999988777765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+...+|++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999998777899999999975 466789999999864
No 100
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.8e-37 Score=357.54 Aligned_cols=206 Identities=28% Similarity=0.383 Sum_probs=176.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999886 99999999987542 24578999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|.++.++... . +...+++++++.++|.+..++.+
T Consensus 97 v~e~l~~~~~~~~~~~-----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~----- 136 (306)
T PRK13537 97 VRENLLVFGRYFGLSA-----------A------------------------AARALVPPLLEFAKLENKADAKV----- 136 (306)
T ss_pred HHHHHHHHHHHcCCCH-----------H------------------------HHHHHHHHHHHHcCCchHhcCch-----
Confidence 9999998665543210 0 00123567889999987666655
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
++|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||++. |...++.++||+|++|++|
T Consensus 137 ~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~s-H~l~e~~~~~d~i~il~~G 214 (306)
T PRK13537 137 GELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVIEEG 214 (306)
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 489999975 5567889999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++++.|+++++..
T Consensus 215 ~i~~~g~~~~l~~ 227 (306)
T PRK13537 215 RKIAEGAPHALIE 227 (306)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 101
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=7.7e-37 Score=360.99 Aligned_cols=217 Identities=26% Similarity=0.397 Sum_probs=185.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 66 (353)
T PRK10851 2 SIEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDV 66 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEC
Confidence 367889887652 2468999999999999999999999999999999999865 3579999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+|||+|++.++|++||+||+.|....... ...+.++..++++++++.++|.+..+..+ ..|||||
T Consensus 67 ~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq 141 (353)
T PRK10851 67 SRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQ 141 (353)
T ss_pred CCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 43 23356799999999999999999999997653211 12344556678899999999998888775 5899999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|+|++||++. ++...+|++++|++ |++++.|
T Consensus 142 ~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g 219 (353)
T PRK10851 142 KQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAG 219 (353)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999998765 899999999986 67888999999986 6888888
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 220 ~~ 221 (353)
T PRK10851 220 TP 221 (353)
T ss_pred CH
Confidence 75
No 102
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-37 Score=339.79 Aligned_cols=215 Identities=26% Similarity=0.399 Sum_probs=187.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+.++|++|+++. . ..+|+|+|++|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+.
T Consensus 3 ~i~~~~l~~~y~~-----------~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~ 68 (235)
T COG1122 3 MIEAENLSFRYPG-----------R-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDT 68 (235)
T ss_pred eEEEEEEEEEcCC-----------C-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeec
Confidence 3688999987742 2 5799999999999999999999999999999999998763 469999999985
Q ss_pred C----cccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 906 E----QSTFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 906 ~----~~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. ...+++.+|||+|++. .+..-||.|.+.|+..-. ..+.++.+++++++++.+++.+.++... ..||
T Consensus 69 ~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LS 140 (235)
T COG1122 69 SSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPP-----FNLS 140 (235)
T ss_pred cchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCc-----cccC
Confidence 4 3467889999999974 456789999999986432 4566678889999999999999988765 5899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
|||||||+||.+|+.+|++|+|||||||||+.+...+++.++++..+ |.|||+++|+.. .+.+.+|++++|++ |+++
T Consensus 141 GGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~ 218 (235)
T COG1122 141 GGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKIL 218 (235)
T ss_pred CcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEe
Confidence 99999999999999999999999999999999999999999999876 689999999986 57788999999986 6888
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
+.|++
T Consensus 219 ~~g~p 223 (235)
T COG1122 219 ADGDP 223 (235)
T ss_pred ecCCH
Confidence 88874
No 103
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-37 Score=326.84 Aligned_cols=217 Identities=28% Similarity=0.367 Sum_probs=178.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++.+|++..++... ....+|+|||++|.+||.+||+|+||||||||.++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCccc
Confidence 468889887664321 123699999999999999999999999999999999998763 589999999875
Q ss_pred Ccc----cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCC
Q 000555 906 EQS----TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSG 978 (1427)
Q Consensus 906 ~~~----~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 978 (1427)
... .+.+.+.+|+||+ .+.|..||++.|.=.... ...++.+ +++.++++.+||.+. .+.. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 442 4678899999998 577999999988655433 2233333 338999999999754 3332 367
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||||||+||||||+.+|++|++|||||+||+..+.+|+++|.++.++ +.|.|+++||.+. +...|||++||++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999764 7899999999763 7778999999986 68
Q ss_pred EEEccCCC
Q 000555 1058 VIYGGKLG 1065 (1427)
Q Consensus 1058 ~~~~g~~~ 1065 (1427)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 88888763
No 104
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.8e-37 Score=313.63 Aligned_cols=200 Identities=27% Similarity=0.398 Sum_probs=173.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
.++|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++.... .+|+||.|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999986 999999999986542 578999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+..||.||++|+.+..+.++ .+.+.++.++|+.+||.+.++
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~-----------------------------------~~i~~rV~~~L~~VgL~~k~~---- 132 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP-----------------------------------REIRRRVSEVLDLVGLKHKAR---- 132 (223)
T ss_pred ccchHhhhhhhhhhccCCCH-----------------------------------HHHHHHHHHHHHHhccchhhh----
Confidence 99999999999988776421 112345788999999987554
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
..+..|||||||||+||||++.+|++|+.||||-.||+..+..|++.+.++- ..|+||++++ |+..-+-.+--+++.
T Consensus 133 -~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeein-r~GtTVl~AT-Hd~~lv~~~~~rvl~ 209 (223)
T COG2884 133 -ALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEIN-RLGTTVLMAT-HDLELVNRMRHRVLA 209 (223)
T ss_pred -cCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHh-hcCcEEEEEe-ccHHHHHhccCcEEE
Confidence 3466799999999999999999999999999999999999999999999985 5699999985 455556667779999
Q ss_pred EeCCeEEEecC
Q 000555 401 LSEGHLVYQGP 411 (1427)
Q Consensus 401 L~~G~iv~~G~ 411 (1427)
|++|+++....
T Consensus 210 l~~Grl~~d~~ 220 (223)
T COG2884 210 LEDGRLVRDES 220 (223)
T ss_pred EeCCEEEeccc
Confidence 99999987643
No 105
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3e-35 Score=369.58 Aligned_cols=216 Identities=29% Similarity=0.465 Sum_probs=179.4
Q ss_pred CCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEE
Q 000555 821 PFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKI 900 (1427)
Q Consensus 821 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i 900 (1427)
+.-+..++|+||+|++.. .+..+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +.+|+|.+
T Consensus 466 ~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~ 532 (709)
T COG2274 466 PKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILL 532 (709)
T ss_pred cccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEE
Confidence 344557999999998853 23469999999999999999999999999999999999876 35899999
Q ss_pred CCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHc-------CCccccccc
Q 000555 901 SGYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLV-------ELDSLRDAL 970 (1427)
Q Consensus 901 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-------~L~~~~~~~ 970 (1427)
||++.+. ..+|+.+|||+||+.++. -|++||+.++. .+.+.++ +.++++.. .+..-.|+.
T Consensus 533 dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t~ 602 (709)
T COG2274 533 DGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDTP 602 (709)
T ss_pred CCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhcccccccc
Confidence 9998654 568899999999998875 69999998753 2233232 22333332 344456788
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEE
Q 000555 971 VGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL 1050 (1427)
Q Consensus 971 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~ 1050 (1427)
+|.. +.+||||||||++|||||+++|+||+||||||+||+.+++.|++.|.+.. +|+|+|+++|+++ ++..+|+|+
T Consensus 603 v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIi 678 (709)
T COG2274 603 VGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRII 678 (709)
T ss_pred cccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEE
Confidence 8754 46899999999999999999999999999999999999999999999875 4799999999975 688999999
Q ss_pred EEecCcEEEEccCC
Q 000555 1051 LMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1051 ~l~~gg~~~~~g~~ 1064 (1427)
||++ |+++..|+.
T Consensus 679 Vl~~-Gkiv~~gs~ 691 (709)
T COG2274 679 VLDQ-GKIVEQGSH 691 (709)
T ss_pred EccC-CceeccCCH
Confidence 9985 799999986
No 106
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-36 Score=360.92 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=186.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999987663 2468999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...+|.+|||+|++.++|++||+||+.|+...+ ..+..+..+.++++++.++|.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 43 223577999999999999999999999986533 2344555667899999999998888876 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999985 68889999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 107
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=338.79 Aligned_cols=215 Identities=28% Similarity=0.409 Sum_probs=179.1
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 577887655310 011469999999999999999999999999999999999865 357999999987642
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000555 908 STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRL 987 (1427)
Q Consensus 908 ~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl 987 (1427)
.++.++|++|++.+++.+|++||+.+....+ ....+...+.++++++.++|.+..+..+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQ---GVPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 4567999999999899999999998875432 1233344567889999999988777765 47999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEec-CcEEEEccCC
Q 000555 988 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR-GGRVIYGGKL 1064 (1427)
Q Consensus 988 ~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gg~~~~~g~~ 1064 (1427)
+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999985 46778999999985 4788877664
No 108
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=337.09 Aligned_cols=209 Identities=24% Similarity=0.426 Sum_probs=176.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (210)
T cd03269 1 LEVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLD 65 (210)
T ss_pred CEEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchh
Confidence 35778876552 2458999999999999999999999999999999999765 35899999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 907 QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
. ..++.++|++|++.+++.+|++||+.+....+ ..+..+..+.++++++.+++.+..++.+ ..||||||||
T Consensus 66 ~-~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 136 (210)
T cd03269 66 I-AARNRIGYLPEERGLYPKMKVIDQLVYLAQLK---GLKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQK 136 (210)
T ss_pred H-HHHccEEEeccCCcCCcCCcHHHHHHHHHHHc---CCChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHH
Confidence 3 34567999999999999999999998865443 1233344566889999999988777665 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 137 l~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~ 209 (210)
T cd03269 137 VQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLY 209 (210)
T ss_pred HHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEec
Confidence 99999999999999999999999999999999999998877899999999975 46678999999986 566654
No 109
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.7e-37 Score=362.47 Aligned_cols=207 Identities=23% Similarity=0.376 Sum_probs=178.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++||+|++.++|.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999876 999999999886543 35779999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+.++.. +. +...+++++++.+||++..+ +.+.
T Consensus 104 ~eNi~~~l~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~-----~~p~ 143 (375)
T PRK09452 104 FENVAFGLRMQKTP-----------AA------------------------EITPRVMEALRMVQLEEFAQ-----RKPH 143 (375)
T ss_pred HHHHHHHHhhcCCC-----------HH------------------------HHHHHHHHHHHHcCCchhhh-----CChh
Confidence 99999986543210 00 00123677899999976544 4556
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.++.+.|+|+++ |...++..++|+|++|++|+
T Consensus 144 ~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vT-Hd~~ea~~laDri~vl~~G~ 222 (375)
T PRK09452 144 QLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVT-HDQEEALTMSDRIVVMRDGR 222 (375)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999999887789999864 55678999999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
++..|+++++..
T Consensus 223 i~~~g~~~~i~~ 234 (375)
T PRK09452 223 IEQDGTPREIYE 234 (375)
T ss_pred EEEEcCHHHHHh
Confidence 999999998853
No 110
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=8e-37 Score=361.14 Aligned_cols=207 Identities=24% Similarity=0.361 Sum_probs=178.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCce--eEEEECCeecCccc-ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKS--GNITYNGYKLDEFH-VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~l 243 (1427)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ + |+|.++|+++.... .++.++||+|+..+++.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999999886 7 99999999886543 256799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.|+.+.++.. +. +...+++++++.+||++.. ++.
T Consensus 95 tv~enl~~~l~~~~~~-----------~~------------------------~~~~~v~~~l~~~gL~~~~-----~~~ 134 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP-----------KA------------------------DIAERVADALKLVGLGDAA-----AHL 134 (362)
T ss_pred cHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHhcCCCchh-----hCC
Confidence 9999999987543321 00 0112467889999998654 445
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcC-CcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQM-DATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~-~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
++.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.++. |.|+|+++ |...++..++|+|++|+
T Consensus 135 ~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vT-Hd~~ea~~l~dri~vl~ 213 (362)
T TIGR03258 135 PAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVT-HDQDDALTLADKAGIMK 213 (362)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEe-CCHHHHHHhCCEEEEEE
Confidence 56799999999999999999999999999999999999999999999987765 78998864 55678899999999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|+++..|+++++.+
T Consensus 214 ~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 214 DGRLAAHGEPQALYD 228 (362)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999998853
No 111
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=338.26 Aligned_cols=213 Identities=29% Similarity=0.386 Sum_probs=179.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 65 (220)
T cd03265 1 IEVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVV 65 (220)
T ss_pred CEEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecC
Confidence 35778877652 2468999999999999999999999999999999999765 35899999998653
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ...++.++|++|++.+++.+||+|++.+....+ ..+.++..+.++++++.++|.+..++.+ ..||||||
T Consensus 66 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 137 (220)
T cd03265 66 REPREVRRRIGIVFQDLSVDDELTGWENLYIHARLY---GVPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMR 137 (220)
T ss_pred cChHHHhhcEEEecCCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHH
Confidence 2 234567999999999999999999998875443 1233344566889999999988777765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+
T Consensus 138 qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 215 (220)
T cd03265 138 RRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGT 215 (220)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999876 899999999976 57778999999986 67777765
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 216 ~ 216 (220)
T cd03265 216 P 216 (220)
T ss_pred h
Confidence 4
No 112
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-36 Score=336.41 Aligned_cols=211 Identities=28% Similarity=0.407 Sum_probs=177.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~ 65 (213)
T cd03301 1 VELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVT 65 (213)
T ss_pred CEEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 35788877653 2468999999999999999999999999999999999865 35799999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 907 QS-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 907 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
.. ..++.++|++|++.+++..|++||+.+..... ....++..+.++++++.+++.+..+..+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (213)
T cd03301 66 DLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQ 137 (213)
T ss_pred cCCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHH
Confidence 32 23457999999998889999999998865432 1233444567889999999988777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 r~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 138 RVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999764 899999999975 56778999999986 5666654
No 113
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=8.8e-37 Score=355.85 Aligned_cols=202 Identities=28% Similarity=0.429 Sum_probs=176.1
Q ss_pred cceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc--ccccceEEEEccCCCCCCCCC
Q 000555 851 KLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ--STFARISGYVEQNDIHSPQVT 928 (1427)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~~~~~~~lT 928 (1427)
++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999865 357999999987643 234567999999999999999
Q ss_pred HHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000555 929 VEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1008 (1427)
Q Consensus 929 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsg 1008 (1427)
|+||+.+.+.++ ..+..+..+.++++++.++|.+..++.+ +.||||||||++||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLY---GLPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 999999876543 2233444567889999999998888876 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1009 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1009 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 57788999999986 688888875
No 114
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.7e-36 Score=353.62 Aligned_cols=214 Identities=27% Similarity=0.401 Sum_probs=182.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999987663 2468999999999999999999999999999999999765 3579999999875
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
.. ...++.+||++|++.+++.+||+||+.+..... ..+..+..+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYF---GMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 234567999999999999999999998755432 1233444456788999999998888776 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57788999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 115
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-36 Score=354.85 Aligned_cols=206 Identities=25% Similarity=0.389 Sum_probs=175.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.+||++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999886 99999999987532 23567999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+.++..+... .+ ...+++++++.+||++..++. +
T Consensus 83 v~e~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~-----~ 122 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK-----------DE------------------------AEERAEELLELFELGEAADRP-----V 122 (302)
T ss_pred HHHHHHHHHHHcCCCH-----------HH------------------------HHHHHHHHHHHcCChhHhCCc-----h
Confidence 9999998765543200 00 012367789999998655554 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++. |...++.++||+|++|++|
T Consensus 123 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvi~~s-H~~~~~~~~~d~v~~l~~G 200 (302)
T TIGR01188 123 GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEE-GVTILLTT-HYMEEADKLCDRIAIIDHG 200 (302)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhC-CCEEEEEC-CCHHHHHHhCCEEEEEECC
Confidence 569999999999999999999999999999999999999999999998654 88999875 5567888999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++++.|+++++.+
T Consensus 201 ~i~~~g~~~~l~~ 213 (302)
T TIGR01188 201 RIIAEGTPEELKR 213 (302)
T ss_pred EEEEECCHHHHHH
Confidence 9999999998764
No 116
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-36 Score=358.45 Aligned_cols=214 Identities=25% Similarity=0.394 Sum_probs=186.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488999987652 2468999999999999999999999999999999999876 3589999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...+|.+|||+|++.++|++||+||+.|....+ ..+..+..++++++++.++|.+..+..+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234678999999999999999999999986533 2345566678899999999998888765 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.+ .|.|+|++||++. ++...+|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 67889999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 5
No 117
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=357.58 Aligned_cols=217 Identities=24% Similarity=0.339 Sum_probs=183.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++++++.. ..++++|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5789998876310 113569999999999999999999999999999999999865 35799999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. .+++.+||++|++.+++.+||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999999999999999875433 2334445567889999999988877765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999986 56778999999986 6888
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 88764
No 118
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-36 Score=337.35 Aligned_cols=214 Identities=28% Similarity=0.431 Sum_probs=179.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.. .+..++|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 5788888765311 011269999999999999999999999999999999999865 35799999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ..+++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..+..+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999999999999999998765432 2234445567889999999988777765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYE 217 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeec
Confidence 9999999999999999999999999999999999999999777999999999975 57778999999986 566654
No 119
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=342.09 Aligned_cols=207 Identities=26% Similarity=0.357 Sum_probs=172.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 46999999999999999999999999999999999999875 89999999987542 2356799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++...... . ... ....+++++++.+||++..+
T Consensus 90 ~~~tv~~~l~~~~~~~~~---~-------~~~------------------------~~~~~~~~~l~~~~l~~~~~---- 131 (235)
T cd03261 90 DSLTVFENVAFPLREHTR---L-------SEE------------------------EIREIVLEKLEAVGLRGAED---- 131 (235)
T ss_pred CCCcHHHHHHHHHhhccC---C-------CHH------------------------HHHHHHHHHHHHcCCchhhc----
Confidence 999999999986432110 0 000 00113567889999975443
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+.+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|||++.| ...++.++||+|++
T Consensus 132 -~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH-~~~~~~~~~d~v~~ 209 (235)
T cd03261 132 -LYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTH-DLDTAFAIADRIAV 209 (235)
T ss_pred -CChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEec-CHHHHHHhcCEEEE
Confidence 4455799999999999999999999999999999999999999999999987655889988754 45678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+++++.
T Consensus 210 l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 210 LYDGKIVAEGTPEELR 225 (235)
T ss_pred EECCeEEEecCHHHHc
Confidence 9999999999988764
No 120
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.1e-37 Score=384.25 Aligned_cols=207 Identities=26% Similarity=0.461 Sum_probs=173.7
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~lT 244 (1427)
.+|+|+|++|+|||.+||+|+||||||||+|+|+|+++|. +|+|.+||++++... .|+.+|||+|++.+| +-|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCc
Confidence 6999999999999999999999999999999999999986 999999999987654 689999999998555 569
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.++.. +.+-++.++++...+. .+. ...++..+||.+|+.+.
T Consensus 563 I~eNi~l~~p--------------------------~~~~e~i~~A~~~ag~-----~~f---I~~lP~gy~t~v~E~G~ 608 (709)
T COG2274 563 IRENIALGNP--------------------------EATDEEIIEAAQLAGA-----HEF---IENLPMGYDTPVGEGGA 608 (709)
T ss_pred HHHHHhcCCC--------------------------CCCHHHHHHHHHHhCc-----HHH---HHhcccccccccccCCC
Confidence 9999998521 1111122222222211 111 23578889999999776
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+||||||||++|||||+++|+||+||||||+||+.++..|.+.|.++.+ |+|+|+..|++ .+.+.||+|++|++|
T Consensus 609 -~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~--~~T~I~IaHRl--~ti~~adrIiVl~~G 683 (709)
T COG2274 609 -NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ--GRTVIIIAHRL--STIRSADRIIVLDQG 683 (709)
T ss_pred -CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc--CCeEEEEEccc--hHhhhccEEEEccCC
Confidence 6999999999999999999999999999999999999999999999864 68888876655 688999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
+|+.+|+++|+++
T Consensus 684 kiv~~gs~~ell~ 696 (709)
T COG2274 684 KIVEQGSHEELLA 696 (709)
T ss_pred ceeccCCHHHHHH
Confidence 9999999999986
No 121
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.6e-36 Score=340.59 Aligned_cols=215 Identities=27% Similarity=0.371 Sum_probs=178.4
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 5678876552 2458999999999999999999999999999999999865 357999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000555 908 S---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKE-------VSKNQRHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 908 ~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
. . .++.++|++|++.+++.+||+|++.+......... ....+..+.++++++.+++.+..++.+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 2 1 23468999999999999999999988754321110 012334556889999999988777765
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 479999999999999999999999999999999999999999999998877899999999986 56778999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 77777764
No 122
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=359.76 Aligned_cols=214 Identities=28% Similarity=0.412 Sum_probs=184.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 378899987652 2468999999999999999999999999999999999865 3579999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQ-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ...++.+|||+|+..++|.+||+||+.|....+ ..+.++..++++++++.++|.+..+..+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLA---GAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 43 223467999999999999999999999876533 2234455667899999999998888776 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999985 57788999999986 68888887
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 123
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.9e-36 Score=336.61 Aligned_cols=221 Identities=38% Similarity=0.645 Sum_probs=180.8
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC-CceeEEEEEECCccC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT-GGYIEGDIKISGYPK 905 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 905 (1427)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 56888887663210 13679999999999999999999999999999999999754 123589999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEE-VMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
....+++.++|++|++.+++.+||+||+.+......+.....+.....+++ .++.+++.+..++.+ +.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544566789999999999999999999998765432222122222334555 888899987776655 58999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468889999999986 6777654
No 124
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-36 Score=320.12 Aligned_cols=206 Identities=25% Similarity=0.388 Sum_probs=171.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++... .++-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 57999999999999999999999999999999999999875 899999999997654 35679999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhC-Ccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLG-LDLCSETVVGN 321 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~ 321 (1427)
+||+|||..++..+..... .....|.+.+.+= |..-.+..
T Consensus 93 LTVeENL~~g~~~~~~~~~------------------------------------~~~~~e~v~~lFP~Lker~~~~--- 133 (237)
T COG0410 93 LTVEENLLLGAYARRDKEA------------------------------------QERDLEEVYELFPRLKERRNQR--- 133 (237)
T ss_pred CcHHHHHhhhhhccccccc------------------------------------ccccHHHHHHHChhHHHHhcCc---
Confidence 9999999987543211000 0001233333332 22222222
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
...|||||||-++|||||+++|++|+|||||.||-|.-..+|++.|+++.++.+.||++ +.|......+.+|+.++|
T Consensus 134 --aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlL-VEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 134 --AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILL-VEQNARFALEIADRGYVL 210 (237)
T ss_pred --ccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEE-EeccHHHHHHhhCEEEEE
Confidence 33599999999999999999999999999999999999999999999998776778888 589999999999999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
.+|+|++.|+.+++..
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999999864
No 125
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-36 Score=339.61 Aligned_cols=217 Identities=29% Similarity=0.407 Sum_probs=180.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 368899987663 2468999999999999999999999999999999999865 3579999999875
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 906 EQS-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 906 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
... ..++.++|++|++.+++.+||+||+.+....+.. ......+..+.++++++.++|.+..+..+ ..|||||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 2245799999999999999999999886543211 00122334456788999999987777765 4799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999764 899999999975 46778999999986 6788777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 220 ~~ 221 (239)
T cd03296 220 TP 221 (239)
T ss_pred CH
Confidence 64
No 126
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.2e-36 Score=336.98 Aligned_cols=208 Identities=31% Similarity=0.432 Sum_probs=172.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.. ...+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 3578887765310 011469999999999999999999999999999999999865 35799999998754
Q ss_pred ccc-------ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000555 907 QST-------FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGL 979 (1427)
Q Consensus 907 ~~~-------~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 979 (1427)
... .++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.++|.+..+..+ ..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLA---GVPKKERRERAEELLERVGLGDRLNHYP-----SEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhcCh-----hhc
Confidence 311 2457999999999999999999999876443 1223334556889999999988777665 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 980 SgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.+|++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999976 5899999999976 34 489999999864
No 127
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.2e-36 Score=356.12 Aligned_cols=202 Identities=23% Similarity=0.315 Sum_probs=177.3
Q ss_pred cceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc---cc----cceEEEEccCCCC
Q 000555 851 KLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS---TF----ARISGYVEQNDIH 923 (1427)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~~~~ 923 (1427)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|++.+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4568999999999999999999999999999999999876 3589999999886532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000555 924 SPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMD 1003 (1427)
Q Consensus 924 ~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlD 1003 (1427)
+|++||+||+.|...+. ..+.++..+++.++++.++|++..+... ..|||||||||+|||||+.+|+|||||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999886543 2345566778999999999988888775 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1004 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|||++||+.++..+++.++++.++ |+|||++||++. ++...+|++++|++ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999998754 899999999975 57888999999986 688888864
No 128
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.1e-36 Score=339.10 Aligned_cols=213 Identities=27% Similarity=0.390 Sum_probs=179.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 65 (232)
T cd03218 1 LRAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDIT 65 (232)
T ss_pred CeEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 35778877652 2468999999999999999999999999999999999865 35799999998754
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 QS---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
.. . .++.++|++|++.+++.+||+||+.+....+ .....+..+.++++++.+++.+..++.+ ..||||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 137 (232)
T cd03218 66 KLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIR---GLSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGG 137 (232)
T ss_pred cCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHH
Confidence 31 1 2356899999999999999999998764332 1223344556789999999988777765 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 215 (232)
T cd03218 138 ERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEG 215 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEe
Confidence 999999999999999999999999999999999999999998877899999999986 57888999999986 6787777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 216 ~~ 217 (232)
T cd03218 216 TP 217 (232)
T ss_pred CH
Confidence 64
No 129
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=357.28 Aligned_cols=211 Identities=25% Similarity=0.396 Sum_probs=177.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-cceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-QRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|+++|+++..... ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999886 9999999998865332 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+......+ ..+. +...+++++++.+||++.. ++.+.
T Consensus 92 ~eni~~~~~~~~~~~~-------~~~~------------------------~~~~~~~~~l~~~~L~~~~-----~~~~~ 135 (353)
T PRK10851 92 FDNIAFGLTVLPRRER-------PNAA------------------------AIKAKVTQLLEMVQLAHLA-----DRYPA 135 (353)
T ss_pred HHHHHhhhhhcccccC-------CCHH------------------------HHHHHHHHHHHHcCCchhh-----hCChh
Confidence 9999997653210000 0000 0112467889999997544 45567
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|+++||||||+|||+.++.++.+.|+++.++.+.|+|++ +|...++..++|+|++|++|+
T Consensus 136 ~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~v-THd~~ea~~~~Dri~vl~~G~ 214 (353)
T PRK10851 136 QLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFV-THDQEEAMEVADRVVVMSQGN 214 (353)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999999987778899886 456678999999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
+++.|+++++..
T Consensus 215 i~~~g~~~~i~~ 226 (353)
T PRK10851 215 IEQAGTPDQVWR 226 (353)
T ss_pred EEEEcCHHHHHh
Confidence 999999998853
No 130
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-36 Score=334.32 Aligned_cols=206 Identities=28% Similarity=0.388 Sum_probs=174.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 57888887652 12468999999999999999999999999999999999865 35799999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. .+++.++|++|++.+++.+|++||+.+....+ ........+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVR---GKKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 24567999999999999999999998875432 1233344567889999999987766665 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++...+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999985 567789999999864
No 131
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.3e-36 Score=332.98 Aligned_cols=207 Identities=28% Similarity=0.416 Sum_probs=174.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (208)
T cd03268 1 LKTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQ 65 (208)
T ss_pred CEEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCccc
Confidence 35778876552 2469999999999999999999999999999999999765 35899999998754
Q ss_pred c-ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 907 Q-STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 907 ~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
. ...++.++|++|++.+++.+||+||+.+....+. . ..+.++++++.+++.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 133 (208)
T cd03268 66 KNIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQ 133 (208)
T ss_pred chHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHH
Confidence 3 2345679999999999999999999988654321 1 1345788999999988777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 134 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 134 RLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999998877899999999975 46678999999986 5776654
No 132
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.9e-37 Score=324.82 Aligned_cols=221 Identities=26% Similarity=0.384 Sum_probs=185.8
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc----cceEEEEccCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV----QRTSAYISQTDNHI 240 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~ 240 (1427)
...++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+ +.-++--+|....|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3568999999999999999999999999999999999999987 9999999999977654 34578899999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
++|||.||+..+...+........ .....+.+ .+...+...+|+.+||.+.+|+..|
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~-~~~~~~~e----------------------~~~~e~A~~~Le~vgL~~~a~~~A~ 148 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLG-RPRARKEE----------------------REARERARELLEFVGLGELADRPAG 148 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhc-cccchhhH----------------------HHHHHHHHHHHHHcCCchhhcchhh
Confidence 999999999998664421000000 00000000 1112346789999999999988877
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+ ||+|||||+.|||||+.+|++|+||||.+||.+.-+.++.+.|+++.++.|.|+++ +-|.+.-++++||||+|
T Consensus 149 ~-----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~till-IEHdM~~Vm~l~dri~V 222 (250)
T COG0411 149 N-----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILL-IEHDMKLVMGLADRIVV 222 (250)
T ss_pred c-----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEE-EEeccHHHhhhccEEEe
Confidence 5 99999999999999999999999999999999999999999999998777789988 57889999999999999
Q ss_pred EeCCeEEEecChHHHHH
Q 000555 401 LSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~~ 417 (1427)
|+.|+++.+|+++++.+
T Consensus 223 l~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 223 LNYGEVIAEGTPEEVRN 239 (250)
T ss_pred ccCCcCcccCCHHHHhc
Confidence 99999999999999864
No 133
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.3e-36 Score=349.68 Aligned_cols=212 Identities=24% Similarity=0.396 Sum_probs=183.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++++. ++.+|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888887652 3468999999999999999999999999999999999865 35899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ...++.+||++|++.+++.+||.||+.+.+.++ ..+.++..+.++++++.++|.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIY---GMKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 234567999999999999999999999876553 2233444566889999999998888876 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999865 799999999986 57888999999986 688888875
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.2e-36 Score=337.75 Aligned_cols=214 Identities=26% Similarity=0.332 Sum_probs=176.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCC-----CCceeEEEEEEC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRK-----TGGYIEGDIKIS 901 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~-----~~~~~~G~i~i~ 901 (1427)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~ 65 (227)
T cd03260 1 IELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLD 65 (227)
T ss_pred CEEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEEC
Confidence 35778876542 246899999999999999999999999999999999976 3 458999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000555 902 GYPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 902 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
|.+... ..+++.++|++|++.++ .+||+||+.+....+. ....++..+.++++++.+++.+..+.... +
T Consensus 66 g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~ 139 (227)
T cd03260 66 GKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---A 139 (227)
T ss_pred CEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---c
Confidence 987532 23456799999998887 7999999988754321 11222234667899999999876665431 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|+++ .+.+.+|++++|++ |
T Consensus 140 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G 216 (227)
T cd03260 140 LGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-G 216 (227)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-C
Confidence 589999999999999999999999999999999999999999999999876 99999999976 56778999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 217 ~i~~~g~~ 224 (227)
T cd03260 217 RLVEFGPT 224 (227)
T ss_pred EEEEecCc
Confidence 78887764
No 135
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-36 Score=358.02 Aligned_cols=207 Identities=23% Similarity=0.345 Sum_probs=178.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
..+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++.... .++.+|||+|++.+|+.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999886 999999999886533 35789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
.||+.|+.+.++.. +. +...+++++++.+||.+. .++.+.
T Consensus 109 ~eNi~~~l~~~~~~-----------~~------------------------~~~~~v~~~l~~l~L~~~-----~~~~~~ 148 (377)
T PRK11607 109 EQNIAFGLKQDKLP-----------KA------------------------EIASRVNEMLGLVHMQEF-----AKRKPH 148 (377)
T ss_pred HHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCchh-----hcCChh
Confidence 99999986543210 00 011246788999999753 455667
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
+|||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.++.+.|+|+++ |...++..++|+|++|++|+
T Consensus 149 ~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vT-Hd~~ea~~laDri~vl~~G~ 227 (377)
T PRK11607 149 QLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVT-HDQEEAMTMAGRIAIMNRGK 227 (377)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEeCCE
Confidence 89999999999999999999999999999999999999999999998877789999864 55678899999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
++..|+++++..
T Consensus 228 i~~~g~~~~~~~ 239 (377)
T PRK11607 228 FVQIGEPEEIYE 239 (377)
T ss_pred EEEEcCHHHHHh
Confidence 999999998853
No 136
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-36 Score=356.94 Aligned_cols=200 Identities=30% Similarity=0.432 Sum_probs=169.7
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~lT 244 (1427)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||++.++. .++++++||+|++.+++ .|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 7999999999999999999999999999999999999986 99999999988765 47899999999996555 59
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCC------ccccccc
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGL------DLCSETV 318 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t~ 318 (1427)
+||||.++.... + ++ .+.++++..|| +...||.
T Consensus 411 ireNi~l~~~~~-------------s----------~e------------------~i~~al~~a~l~~~v~~p~GLdt~ 449 (559)
T COG4988 411 IRENILLARPDA-------------S----------DE------------------EIIAALDQAGLLEFVPKPDGLDTV 449 (559)
T ss_pred HHHHhhccCCcC-------------C----------HH------------------HHHHHHHHhcHHHhhcCCCcccch
Confidence 999999862110 0 01 12223333333 4567899
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+|+.+ ++|||||+|||++|||++.+++++++||||++||.+++..|.+.|.++++ ++|++++.|++ +...-+|+|
T Consensus 450 ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I 524 (559)
T COG4988 450 IGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRI 524 (559)
T ss_pred hccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEE
Confidence 99876 47999999999999999999999999999999999999999999999876 58988876664 677899999
Q ss_pred EEEeCCeEEEecChHHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~ 417 (1427)
++|++|+++++|.++++.+
T Consensus 525 ~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 525 VVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEecCCceeccCCHHHHhh
Confidence 9999999999999999864
No 137
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.3e-36 Score=358.72 Aligned_cols=218 Identities=27% Similarity=0.367 Sum_probs=184.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i 67 (402)
T PRK09536 3 MIDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDV 67 (402)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEc
Confidence 378899987652 3569999999999999999999999999999999999865 3579999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCc-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSK-EVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+|||+|+..+++.+||+|++.++....... .....+..+.++++++.+++.+..++.+ +.|||
T Consensus 68 ~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSg 142 (402)
T PRK09536 68 EALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSG 142 (402)
T ss_pred CcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 43 345678999999999989999999998864211100 1012334567899999999998888876 58999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||+.|||||+++|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 143 GerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~ 220 (402)
T PRK09536 143 GERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAA 220 (402)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57788999999986 678888
Q ss_pred cCCC
Q 000555 1062 GKLG 1065 (1427)
Q Consensus 1062 g~~~ 1065 (1427)
|+..
T Consensus 221 G~~~ 224 (402)
T PRK09536 221 GPPA 224 (402)
T ss_pred cCHH
Confidence 8753
No 138
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-36 Score=337.88 Aligned_cols=217 Identities=27% Similarity=0.363 Sum_probs=180.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.. .+..++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5778887765310 011369999999999999999999999999999999999865 35799999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. ..++.++|++|++.+++.+|++||+.+....+ .....+..+.++++++.++|.+..+..+ ..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIA---GVPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 31 23567999999999999999999998865433 1233444566889999999988777765 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++ |+|||+++|+++ .+.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999975 46778999999986 6788
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
..|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 87764
No 139
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.8e-36 Score=352.47 Aligned_cols=206 Identities=27% Similarity=0.359 Sum_probs=175.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+.+|+|+|++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999986 99999999987542 34578999999998999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|....++... . +....++++++.+||++..++.+
T Consensus 131 v~e~l~~~~~~~~~~~-----------~------------------------~~~~~~~~ll~~~~L~~~~~~~~----- 170 (340)
T PRK13536 131 VRENLLVFGRYFGMST-----------R------------------------EIEAVIPSLLEFARLESKADARV----- 170 (340)
T ss_pred HHHHHHHHHHHcCCCH-----------H------------------------HHHHHHHHHHHHcCCchhhCCCh-----
Confidence 9999997654432100 0 00112566888999986655554
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
++|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++.+ .|+|||++. |...++.++||+|++|++|
T Consensus 171 ~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisS-H~l~e~~~~~d~i~il~~G 248 (340)
T PRK13536 171 SDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVLEAG 248 (340)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999865 489999974 5667899999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
+++++|+++++..
T Consensus 249 ~i~~~g~~~~l~~ 261 (340)
T PRK13536 249 RKIAEGRPHALID 261 (340)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999999864
No 140
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.1e-36 Score=333.08 Aligned_cols=205 Identities=27% Similarity=0.371 Sum_probs=173.0
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 5678877652 12468999999999999999999999999999999999765 357999999987542
Q ss_pred c------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 908 S------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 908 ~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
. .+++.++|++|++.+++.+|++||+.+....+ ....++..+.++++++.+++.+..++.+ .+|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVT---GVPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 24567999999999999999999998875432 1233444567889999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. .+.+.+|++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999998777999999999975 466679999999864
No 141
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-36 Score=358.01 Aligned_cols=207 Identities=24% Similarity=0.406 Sum_probs=176.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 46999999999999999999999999999999999999876 899999999886432 24679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.|+.+..+.. +. +...+++++++.+||++..+ +.+.
T Consensus 93 ~eni~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~lgL~~~~~-----~~~~ 132 (369)
T PRK11000 93 AENMSFGLKLAGAK-----------KE------------------------EINQRVNQVAEVLQLAHLLD-----RKPK 132 (369)
T ss_pred HHHHHhHHhhcCCC-----------HH------------------------HHHHHHHHHHHHcCChhhhc-----CChh
Confidence 99999976543210 00 00123677899999975444 4456
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.+.|+|++.| ...++.++||+|++|++|+
T Consensus 133 ~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTH-d~~~~~~~~d~i~vl~~G~ 211 (369)
T PRK11000 133 ALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTH-DQVEAMTLADKIVVLDAGR 211 (369)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeC-CHHHHHHhCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999999987766889998754 4568889999999999999
Q ss_pred EEEecChHHHHH
Q 000555 406 LVYQGPRAEVLE 417 (1427)
Q Consensus 406 iv~~G~~~~~~~ 417 (1427)
++..|+++++..
T Consensus 212 i~~~g~~~~i~~ 223 (369)
T PRK11000 212 VAQVGKPLELYH 223 (369)
T ss_pred EEEEcCHHHHHh
Confidence 999999998753
No 142
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-37 Score=315.82 Aligned_cols=209 Identities=22% Similarity=0.390 Sum_probs=180.4
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc----cceEEEEccCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV----QRTSAYISQTDNHIP 241 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~~~~~~ 241 (1427)
++++++|||+.+++||+++++|||||||||.+.++.|+.+|+ +|+|.++|.+++...+ +.-+||+||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 467999999999999999999999999999999999999987 9999999999987643 234899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
.+||+|||.-..+.+... ..+. +.+.+.+.+|+.+.|.++.+..
T Consensus 93 ~LtV~dNi~~vlE~~~~d---------~~~~------------------------~~~~~l~~LL~ef~i~hlr~~~--- 136 (243)
T COG1137 93 KLTVEDNIMAVLEIREKD---------LKKA------------------------ERKEELDALLEEFHITHLRDSK--- 136 (243)
T ss_pred cCcHHHHHHHHHhhhhcc---------hhHH------------------------HHHHHHHHHHHHhchHHHhcCc---
Confidence 999999998876654310 0000 0112367899999998876654
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
...||||||+|+-|||||+.+|+.++||||++|+||-+..+|.+.++.+.+ .|.-|+++ .|...|+++.|||.+++
T Consensus 137 --a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLIT-DHNVREtL~i~dRaYIi 212 (243)
T COG1137 137 --AYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLIT-DHNVRETLDICDRAYII 212 (243)
T ss_pred --ccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEc-cccHHHHHhhhheEEEE
Confidence 346999999999999999999999999999999999999999999999865 58899985 67788999999999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 143
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.9e-36 Score=354.08 Aligned_cols=214 Identities=27% Similarity=0.451 Sum_probs=178.9
Q ss_pred CCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEEC
Q 000555 822 FQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS 901 (1427)
Q Consensus 822 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~ 901 (1427)
..++.++.+|++|.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+|
T Consensus 316 ~~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vn 381 (559)
T COG4988 316 EPPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVN 381 (559)
T ss_pred CCCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEEC
Confidence 34667778899987742 23789999999999999999999999999999999998764 58999999
Q ss_pred CccCC---cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc------cccccc
Q 000555 902 GYPKE---QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL------RDALVG 972 (1427)
Q Consensus 902 g~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg 972 (1427)
|.+.. ...++++++||+|++.+++ -|++||+.++.. +.+++ .+.++++..+|.+. .|+.+|
T Consensus 382 g~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~~-----~~s~e----~i~~al~~a~l~~~v~~p~GLdt~ig 451 (559)
T COG4988 382 GIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLARP-----DASDE----EIIAALDQAGLLEFVPKPDGLDTVIG 451 (559)
T ss_pred CccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccCC-----cCCHH----HHHHHHHHhcHHHhhcCCCcccchhc
Confidence 98754 4568899999999998886 599999987631 22333 35667777666544 456666
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 973 FPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 973 ~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
. ++++|||||+|||++||||+++++++++||||++||.+|++.|++.|.++++ ++||+++|||+. ....+|+|++|
T Consensus 452 e-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vl 527 (559)
T COG4988 452 E-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVL 527 (559)
T ss_pred c-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEe
Confidence 4 4578999999999999999999999999999999999999999999999986 599999999964 56678999999
Q ss_pred ecCcEEEEccCC
Q 000555 1053 KRGGRVIYGGKL 1064 (1427)
Q Consensus 1053 ~~gg~~~~~g~~ 1064 (1427)
++ |+++..|..
T Consensus 528 d~-G~l~~~g~~ 538 (559)
T COG4988 528 DN-GRLVEQGTH 538 (559)
T ss_pred cC-CceeccCCH
Confidence 86 688888865
No 144
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-36 Score=339.91 Aligned_cols=216 Identities=26% Similarity=0.322 Sum_probs=176.5
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 5678876542 11468999999999999999999999999999999999765 357999999987543
Q ss_pred c------cccceEEEEccCCCCCCCCCHHHHHHHHHhccC-----CcCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000555 908 S------TFARISGYVEQNDIHSPQVTVEESLWFSANLRL-----SKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 908 ~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
. ..++.++|++|++.+++.+||+||+.+...... ..........+.++++++.++|.+..+..+
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA----- 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----
Confidence 1 245679999999999999999999987532110 001112233456788999999987766654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 589999999999999999999999999999999999999999999998764 899999999986 46778999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 678887764
No 145
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6.1e-36 Score=333.89 Aligned_cols=214 Identities=27% Similarity=0.411 Sum_probs=178.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++. .++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 357788765521 12469999999999999999999999999999999999865 35899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ..+++.++|++|++.+++..|++||+.+..... ..+..+..+.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLK---GLPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 234567999999999999999999998865433 1233334456889999999988777765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 599999999986 46678999999986 678777764
No 146
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.3e-36 Score=348.51 Aligned_cols=229 Identities=23% Similarity=0.337 Sum_probs=185.9
Q ss_pred cCCCCCccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCC
Q 000555 112 VGIEVPKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPAS 191 (1427)
Q Consensus 112 ~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 191 (1427)
..+..|.-.++|+|++.+-. ++++||+++||+|++||-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46677777899999886521 234599999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhh
Q 000555 192 GKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYIND 268 (1427)
Q Consensus 192 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 268 (1427)
||||++|+|.+..+ . +|+|.+||+++.+. ..|+.||||||+..+| +.||.+||.||..- ...+ +
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~s-----as~e---e 456 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPS-----ASDE---E 456 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCC-----cCHH---H
Confidence 99999999999997 3 89999999998765 3678999999987555 56999999996311 0001 1
Q ss_pred hhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEE
Q 000555 269 LNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTL 348 (1427)
Q Consensus 269 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~il 348 (1427)
.-+..|..+ .++++ ..|++.++|.||+++.. |||||||||++|||++.+|+|+
T Consensus 457 V~e~~k~a~------------------------~hd~i--~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il 509 (591)
T KOG0057|consen 457 VVEACKRAG------------------------LHDVI--SRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPIL 509 (591)
T ss_pred HHHHHHHcC------------------------cHHHH--HhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeE
Confidence 111111111 11122 24778899999999876 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 349 FMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 349 lLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
++|||||+||+.|..++++.+.+.. .++|+|+..|.. .+..-||+|++|++|++...|+++|++.
T Consensus 510 ~~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 510 LLDEATSALDSETEREILDMIMDVM--SGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred EecCcccccchhhHHHHHHHHHHhc--CCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 9999999999999999999998843 489999977654 6789999999999999999999999975
No 147
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=345.35 Aligned_cols=218 Identities=25% Similarity=0.362 Sum_probs=180.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++||++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 78899988763210 012469999999999999999999999999999999999865 35899999998764
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000555 907 Q-----STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD--SLRDALVGFPGSSG 978 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 978 (1427)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..++.+ +.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 3 134578999999863 334579999999865432 234555667789999999997 5566654 58
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 46678999999986 68
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 8888865
No 148
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-36 Score=345.96 Aligned_cols=220 Identities=25% Similarity=0.400 Sum_probs=178.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-----cccceEEEEccCCC-CC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDN-HI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~-~~ 240 (1427)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+|||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999886 99999999988642 23568999999863 44
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
...||+||+.|+....+.. +. +...+++++++.+||+. ....
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gL~~---~~~~ 138 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-----------EE------------------------EIENRVKRAMNIVGLDY---EDYK 138 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-----------HH------------------------HHHHHHHHHHHHcCCCc---hhhc
Confidence 5679999999875432210 00 01123677899999961 0123
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
++.++.|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|++++++.|+|||+++|+ ..++.++||+|++
T Consensus 139 ~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd-~~~~~~~~drv~~ 217 (287)
T PRK13637 139 DKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHS-MEDVAKLADRIIV 217 (287)
T ss_pred cCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEE
Confidence 455678999999999999999999999999999999999999999999999977668999997554 5677889999999
Q ss_pred EeCCeEEEecChHHHHH---HHHhcCCCCCC
Q 000555 401 LSEGHLVYQGPRAEVLE---FFESLGFQLPP 428 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 428 (1427)
|++|+++++|+++++.+ .+...|+..|.
T Consensus 218 l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 218 MNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 99999999999998753 23445665554
No 149
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.3e-36 Score=332.09 Aligned_cols=191 Identities=30% Similarity=0.423 Sum_probs=162.6
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCC-CCCCCCHH
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDI-HSPQVTVE 930 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 930 (1427)
+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 468999999999999999999999999999999999765 358999999987644445567999999974 34567999
Q ss_pred HHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000555 931 ESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1010 (1427)
Q Consensus 931 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD 1010 (1427)
||+.+..... .. ..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~-----~~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL-----DA--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc-----Cc--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998764321 11 1245788999999988877765 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 1011 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 1011 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++| ++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~G-~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLANG-AI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999777999999999975 466789999999864 54
No 150
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.9e-36 Score=336.98 Aligned_cols=214 Identities=25% Similarity=0.384 Sum_probs=180.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 57888887652 2468999999999999999999999999999999999765 35799999998764
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 907 Q-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
. ..+++.++|++|++.+++.+||+||+.+..... ......+..+.+.++++.++|.+..+..+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRV--RGASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 234567999999999999999999998764211 11233444567889999999987777665 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999998877999999999986 46678999999986 688888
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 774
No 151
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=333.41 Aligned_cols=217 Identities=27% Similarity=0.367 Sum_probs=179.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37899998876310 012469999999999999999999999999999999999865 3589999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000555 906 EQST------F-ARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSG 978 (1427)
Q Consensus 906 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 978 (1427)
.... . ++.++|++|++.+++.+|++||+.+..... ....++..+.++++++.++|.+..+..+ ..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 4321 2 256999999998999999999999865432 1233444567889999999988777665 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ +|+|||+++|+++ ....+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 5899999999975 3445689999986 68
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 8888775
No 152
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=353.35 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=175.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999876 999999999876432 246799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++....+.. ..+ ...+++++++.+||++..++
T Consensus 95 ~~~tv~eni~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gL~~~~~~--- 136 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP-----------KAE------------------------IKARVTELLELVGLSDKADR--- 136 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCCchhhhC---
Confidence 9999999999976543220 000 01235678999999765444
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.++.|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.++.|+|+|++.| ...++.++||+|++
T Consensus 137 --~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH-~~~~i~~~~d~v~~ 213 (343)
T PRK11153 137 --YPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITH-EMDVVKRICDRVAV 213 (343)
T ss_pred --ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEE
Confidence 456799999999999999999999999999999999999999999999997766889998754 45678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+.+++.
T Consensus 214 l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 214 IDAGRLVEQGTVSEVF 229 (343)
T ss_pred EECCEEEEEcCHHHHH
Confidence 9999999999998875
No 153
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-36 Score=333.77 Aligned_cols=205 Identities=26% Similarity=0.371 Sum_probs=171.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999875 99999999876432 23467999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+..+..+.. .. +....++++++.+||++..++ .+
T Consensus 90 v~~~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~~ 129 (220)
T cd03265 90 GWENLYIHARLYGVP-----------GA------------------------ERRERIDELLDFVGLLEAADR-----LV 129 (220)
T ss_pred HHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCHHHhhC-----Ch
Confidence 999999875433210 00 001235678999999764444 44
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++. |...++.+++|++++|++|
T Consensus 130 ~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~t-H~~~~~~~~~d~i~~l~~G 208 (220)
T cd03265 130 KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTT-HYMEEAEQLCDRVAIIDHG 208 (220)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCC
Confidence 569999999999999999999999999999999999999999999998775588988865 5556788899999999999
Q ss_pred eEEEecChHHH
Q 000555 405 HLVYQGPRAEV 415 (1427)
Q Consensus 405 ~iv~~G~~~~~ 415 (1427)
+++..|+++++
T Consensus 209 ~i~~~~~~~~~ 219 (220)
T cd03265 209 RIIAEGTPEEL 219 (220)
T ss_pred EEEEeCChHHc
Confidence 99999987764
No 154
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1e-35 Score=338.65 Aligned_cols=214 Identities=26% Similarity=0.352 Sum_probs=179.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 68899987652 2358999999999999999999999999999999999865 35799999998653
Q ss_pred c-----------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000555 907 Q-----------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPG 975 (1427)
Q Consensus 907 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 975 (1427)
. ..+++.++|++|++.+++..||+||+.+...... ....++..+.++++++.++|.+..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1235679999999999999999999987542111 1233444566889999999987776654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 589999999999999999999999999999999999999999999999877999999999975 46678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 678887764
No 155
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=343.22 Aligned_cols=203 Identities=24% Similarity=0.304 Sum_probs=172.4
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc---c----ccceEEEEccCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS---T----FARISGYVEQNDI 922 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~ 922 (1427)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 35679999999999999999999999999999999999865 3579999999875421 1 1357999999999
Q ss_pred CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000555 923 HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFM 1002 (1427)
Q Consensus 923 ~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illl 1002 (1427)
+++.+||+||+.+..... .....+..+.++++++.++|.+..++.+ ..||||||||++||+||+.+|++|+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999998875432 1223344566889999999988777776 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1003 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1003 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999975 46778999999986 677777764
No 156
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-36 Score=337.36 Aligned_cols=213 Identities=29% Similarity=0.410 Sum_probs=177.9
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 56788765521 1458999999999999999999999999999999999865 357999999987542
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHH
Q 000555 908 ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS--LRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 908 ---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgG 982 (1427)
..+++.++|++|++.+++.+||+||+.+...++ ..+.++..+.++++++.+++.+ ..+..+ +.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHH
Confidence 234567899999999999999999998865432 1233444566889999999985 556554 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999975 56788999999986 677777
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 764
No 157
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-36 Score=309.35 Aligned_cols=216 Identities=26% Similarity=0.398 Sum_probs=182.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
|+.+|++|++. .+++|++||++++|||++||+|||||||||||++|+|...+ .+|++.++|.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 57789998773 56799999999999999999999999999999999997663 4799999999875
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
. ....+..+.+||+..+....||+|-+.++..-... .-...+..+.++++|...++.+++.... ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 4 34567779999999887778999999987532211 1122244556889999999999887765 5899999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 984 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 984 rqrl~ia~aL~~------~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||.+||.|++ ++++||||||||+||......++++.|+++++|..|+++.||.+. ...++|+|++|.+ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 456999999999999999999999999999999999999999985 6678999999986 78
Q ss_pred EEEccCCC
Q 000555 1058 VIYGGKLG 1065 (1427)
Q Consensus 1058 ~~~~g~~~ 1065 (1427)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 89888764
No 158
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=337.44 Aligned_cols=212 Identities=29% Similarity=0.401 Sum_probs=178.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 57888887652 2468999999999999999999999999999999999865 35799999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 907 QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
. ..+.+||++|++.+++.+||+||+.+....+ .....+..+.++++++.++|.+..+..+ ..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2345899999999999999999998764332 1233444567889999999987777654 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEec-CcEEEEccCC
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR-GGRVIYGGKL 1064 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gg~~~~~g~~ 1064 (1427)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. .+...+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 57788999999985 5788887654
No 159
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.4e-36 Score=333.75 Aligned_cols=211 Identities=30% Similarity=0.438 Sum_probs=174.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++++|+|+||++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcC
Confidence 35778876542 2468999999999999999999999999999999999865 35799999998754
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCH
Q 000555 907 QS---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLV-ELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. . .++.++|++|++.+++.+|++||+.+...... ..+..+.++++++.+ ++.+..++.+ ..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCH
Confidence 32 1 24569999999999999999999988754321 122334566778877 4766666654 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++...+|++++|++ |+++..
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999999877899999999975 46788999999986 678877
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 764
No 160
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-36 Score=331.90 Aligned_cols=200 Identities=27% Similarity=0.422 Sum_probs=166.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999875 999999999875432 34679999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.++....+.. ..+ ....++++++.+||++..+. .+.
T Consensus 90 ~~~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-----~~~ 129 (213)
T cd03259 90 AENIAFGLKLRGVP-----------KAE------------------------IRARVRELLELVGLEGLLNR-----YPH 129 (213)
T ss_pred HHHHHhHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCChhhhhc-----Chh
Confidence 99998864332110 000 01135678889999754444 345
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|||++.| ...++.++||++++|++|+
T Consensus 130 ~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH-~~~~~~~~~d~v~~l~~G~ 208 (213)
T cd03259 130 ELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTH-DQEEALALADRIAVMNEGR 208 (213)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEec-CHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999987656889988654 4567889999999999999
Q ss_pred EEEec
Q 000555 406 LVYQG 410 (1427)
Q Consensus 406 iv~~G 410 (1427)
+++.|
T Consensus 209 i~~~g 213 (213)
T cd03259 209 IVQVG 213 (213)
T ss_pred EEecC
Confidence 98765
No 161
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=360.00 Aligned_cols=301 Identities=25% Similarity=0.308 Sum_probs=229.3
Q ss_pred hhhhhcccCCCCCCCCcceeeecccccch-hhhHHHHHHhhhcCccCHHHHHHHHH-----HHHhhcCC---CC------
Q 000555 52 GNFALLKTTTPRNGGEAKTETIDVRKLNR-SRRELVVSKALATNDQDNYKLLSAIK-----ERLDRVGI---EV------ 116 (1427)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~~------ 116 (1427)
..-.+++++..+.|.++..++||++=... +||..+|.+|..+-.++.+++++.-+ ..+..+.. ..
T Consensus 192 qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p~hpYT~~Ll~a~p~~~~~~~~~~~~ 271 (539)
T COG1123 192 QILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNPQHPYTRGLLAAVPRLGDEKIIRLPR 271 (539)
T ss_pred HHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhccCCcccHHHHhhCCCccccccccccc
Confidence 33444444443445667778899998887 99999999999999999999995432 11121110 00
Q ss_pred -----CccEEEEeeeEEEEEEecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCC
Q 000555 117 -----PKVEVRFQNLKVVADVQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPAS 191 (1427)
Q Consensus 117 -----p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 191 (1427)
...-++.+||+..-.... ....+.+....+++||||.+++||+++|+|+|||
T Consensus 272 ~~~~~~~~ll~V~~l~k~y~~~~-----------------------~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGs 328 (539)
T COG1123 272 RGPLRAEPLLSVRNLSKRYGSRK-----------------------GLFVRERGEVKAVDDVSFDLREGETLGLVGESGS 328 (539)
T ss_pred ccccccCceeEeeeeeeeecccc-----------------------ccccccccceeeeeeeeeEecCCCEEEEECCCCC
Confidence 111233444443211100 0011113456899999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCceeEEEECCeec--Ccc---cccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCcchhh
Q 000555 192 GKSTLLLALAGKLDSSLKKSGNITYNGYKL--DEF---HVQRTSAYISQTD--NHIPELTVRETFDFAARWQGANEGFAA 264 (1427)
Q Consensus 192 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~--~~~---~~~~~~~yv~Q~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~ 264 (1427)
|||||.++|+|+.+|+ +|+|.++|.+. +.. ..++.+-+|+|++ .+.|.+||+++|...........
T Consensus 329 GKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~---- 401 (539)
T COG1123 329 GKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS---- 401 (539)
T ss_pred CHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc----
Confidence 9999999999999986 99999999872 211 2345677788875 58899999999988765433200
Q ss_pred HhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCC
Q 000555 265 YINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGP 344 (1427)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~ 344 (1427)
. .+.+.+++++++..||+. ...++++.+|||||||||+|||||+.+
T Consensus 402 ------~------------------------~~~~~rv~~ll~~VgL~~----~~l~ryP~elSGGQrQRvaIARALa~~ 447 (539)
T COG1123 402 ------G------------------------AERRARVAELLELVGLPP----EFLDRYPHELSGGQRQRVAIARALALE 447 (539)
T ss_pred ------h------------------------HHHHHHHHHHHHHcCCCH----HHHhcCchhcCcchhHHHHHHHHHhcC
Confidence 0 011235788999999983 367788999999999999999999999
Q ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 345 RKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 345 p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
|+++++|||||+||+.++.+|.++|+++.++.|.|.++ |.|+..-+...||||++|++|+||+.||.+++.+
T Consensus 448 P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lf-ISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~ 519 (539)
T COG1123 448 PKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLF-ISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFE 519 (539)
T ss_pred CCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEE-EeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999998 5788899999999999999999999999998853
No 162
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.3e-36 Score=339.02 Aligned_cols=217 Identities=24% Similarity=0.302 Sum_probs=176.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. .++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 56788876542 12458999999999999999999999999999999999865 35799999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccC-----CcCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000555 907 Q------STFARISGYVEQNDIHSPQVTVEESLWFSANLRL-----SKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPG 975 (1427)
Q Consensus 907 ~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 975 (1427)
. ..+++.+||++|++.+++.+||+||+.+...... .......+..++++++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 1245679999999999999999999976421100 001112233466888999999987777654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
..||||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ .+.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 579999999999999999999999999999999999999999999998764 899999999986 46678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 677777765
No 163
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-36 Score=352.05 Aligned_cols=211 Identities=26% Similarity=0.405 Sum_probs=175.4
Q ss_pred CceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCc
Q 000555 824 PLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGY 903 (1427)
Q Consensus 824 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 903 (1427)
+..|+|+||++++. +++++|+++||+|++||.+||+|+|||||||++++|.+..+ .+|+|.|||.
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34699999998774 34569999999999999999999999999999999999765 4799999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCC-------cccccccccC
Q 000555 904 PKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVEL-------DSLRDALVGF 973 (1427)
Q Consensus 904 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~vg~ 973 (1427)
++++ ..+|+.+||||||..+| +.||.+|+.|+. ...++++ |-++.+..++ .+-.+|.+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8654 56789999999988776 569999999873 2233333 4444455444 4456677886
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
.| ..|||||||||+||||++++|+|+++|||||.||++|+..+++.+++. ..++|+|++.|+. ++...||+|++|+
T Consensus 484 rG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD 559 (591)
T ss_pred cc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE
Confidence 55 469999999999999999999999999999999999999999999984 4589999999995 5788999999999
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |++...|+.
T Consensus 560 n-G~v~e~gth 569 (591)
T KOG0057|consen 560 N-GTVKEYGTH 569 (591)
T ss_pred C-CeeEEeccH
Confidence 7 566666764
No 164
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-36 Score=309.51 Aligned_cols=208 Identities=27% Similarity=0.436 Sum_probs=172.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1427)
+.+|++||++++|||+++|+||||||||||||+|+|++.|+ +|+|++||++++... ..+.-+.++|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 46999999999999999999999999999999999999986 999999999987654 356779999998777778
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+|-+.++..-.+. +. .| .++....+.+|...++.+.+ .+.
T Consensus 91 tv~eVV~mGr~p~~~--g~----------------~~---------------~e~~~i~~~ala~~d~~~la-----~R~ 132 (259)
T COG4559 91 TVQEVVQMGRIPHRS--GR----------------EP---------------EEDERIAAQALAATDLSGLA-----GRD 132 (259)
T ss_pred EHHHHHHhccccccc--CC----------------Cc---------------hhhHHHHHHHHHHcChhhhh-----ccc
Confidence 999999998543211 00 00 01122366778888887543 344
Q ss_pred CCCCChHHhHHHHHHHHHhC------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 324 IRGVSGGQKKRVTTGEMIVG------PRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~------~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
.+.|||||||||.+||.|+. ++++||||||||+||.....++++..|+++++ |..|++ +.|+.+-...+||+
T Consensus 133 y~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~~V~~-VLHDLNLAA~YaDr 210 (259)
T COG4559 133 YRTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GGAVLA-VLHDLNLAAQYADR 210 (259)
T ss_pred hhhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CCcEEE-EEccchHHHHhhhe
Confidence 56799999999999999974 45699999999999999999999999999986 566666 56788999999999
Q ss_pred EEEEeCCeEEEecChHHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~ 417 (1427)
|++|++|+++..|++++++.
T Consensus 211 ivll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 211 IVLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeeeCCeEeecCCHHHhcC
Confidence 99999999999999999873
No 165
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.45 Aligned_cols=215 Identities=20% Similarity=0.308 Sum_probs=180.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478999987652 2468999999999999999999999999999999999865 3579999999875
Q ss_pred Ccc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000555 906 EQS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGL 979 (1427)
Q Consensus 906 ~~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 979 (1427)
... ..++.++|++|+..+++.+||.||+.+..... ...+..+..+.+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREH--TQLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 13567999999999999999999998764321 11233334456788999999988777765 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 980 SgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
|||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998764 899999999975 57778999999986 688
Q ss_pred EEccCC
Q 000555 1059 IYGGKL 1064 (1427)
Q Consensus 1059 ~~~g~~ 1064 (1427)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 888764
No 166
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-36 Score=315.93 Aligned_cols=213 Identities=27% Similarity=0.390 Sum_probs=178.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++..| ++.++|+|||+++++||+++|+|||||||||||++|+|..+. .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 5778876443 357899999999999999999999999999999999998763 4799999999876
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000555 907 QS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVE-LDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..++-++||||....||.+||+|||..++..+.. ++.....++++.+.+- |.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456789999999999999999999988655422 1111222677777773 6666777665 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
||||-++|||||+.+|++|+|||||.||-|.-.++|.+.|+++.++ |.||+++-++.. ...+.+|+.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 779999988865 46788999999985 79999
Q ss_pred ccCCC
Q 000555 1061 GGKLG 1065 (1427)
Q Consensus 1061 ~g~~~ 1065 (1427)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99853
No 167
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=340.63 Aligned_cols=215 Identities=27% Similarity=0.356 Sum_probs=180.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ .+..+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 378999987663 12358999999999999999999999999999999999765 3579999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ...++.+||++|++. .++..||.||+.|..... ..+.++..+.++++++.++|.+..++.+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223567999999863 455689999998864321 2334444566889999999988877765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999975 46678999999986 678888
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 875
No 168
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-35 Score=338.55 Aligned_cols=201 Identities=20% Similarity=0.223 Sum_probs=151.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+++.+|++.++ ++..+++.+++..++.-..++++|+||+||||+++++.|...+ ..|-+.+.+
T Consensus 362 ~l~i~~V~f~y~-----------p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~--- 425 (582)
T KOG0062|consen 362 NLRISYVAFEYT-----------PSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP--- 425 (582)
T ss_pred eeEEEeeeccCC-----------CcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc---
Confidence 578888876543 2223689999999999999999999999999999999986542 456555543
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqr 984 (1427)
+.+++|-.|..+-+-.+.|.+ +.+-...+.. .++ +.+++-+..+||+.- +... ..+||||||
T Consensus 426 -----r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~pG--~~~----ee~r~hl~~~Gl~g~la~~s-----i~~LSGGQK 488 (582)
T KOG0062|consen 426 -----RLRIKYFAQHHVDFLDKNVNA-VDFMEKSFPG--KTE----EEIRRHLGSFGLSGELALQS-----IASLSGGQK 488 (582)
T ss_pred -----cceecchhHhhhhHHHHHhHH-HHHHHHhCCC--CCH----HHHHHHHHhcCCCchhhhcc-----ccccCCcch
Confidence 456899999765444445433 3333334322 222 335677888999743 2222 358999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
-||++|.....+|.+|+|||||+.||-.+-..+.+.|++. +..||+|+|+-+ -+-..|+.+.+.++|...-+.|.
T Consensus 489 srvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~-fi~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 489 SRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEE-FISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred hHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHH-HHhhcCceeEEEcCCcEEeeecc
Confidence 9999999999999999999999999999999999999876 568999999965 36667999999998766655554
No 169
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=328.88 Aligned_cols=209 Identities=31% Similarity=0.465 Sum_probs=174.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (211)
T cd03264 1 LQLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVL 64 (211)
T ss_pred CEEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccc
Confidence 35778876552 236899999999999 999999999999999999999765 35899999998754
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ..+++.++|++|++.+++.+||+||+.+....+ ..+.++..+.++++++.++|.+..++.+ ..||||||
T Consensus 65 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 136 (211)
T cd03264 65 KQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLK---GIPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMR 136 (211)
T ss_pred cchHHHHhheEEecCCCcccccCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHH
Confidence 3 234567999999999999999999998865443 1223334556889999999988777765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |+++..|
T Consensus 137 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 137 RRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999999999999999999999999999999876 599999999975 46678999999986 5666543
No 170
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.2e-35 Score=329.90 Aligned_cols=206 Identities=27% Similarity=0.373 Sum_probs=173.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+++|++++|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (213)
T cd03262 1 IEIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLT 65 (213)
T ss_pred CEEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECC
Confidence 35778877652 2458999999999999999999999999999999999865 35799999998763
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 907 Q-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
. ..+++.++|++|++.+++.+|++||+.+..... ...+.++..+.++++++.+++.+..+..+ ..|||
T Consensus 66 ~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 138 (213)
T cd03262 66 DDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKV--KGMSKAEAEERALELLEKVGLADKADAYP-----AQLSG 138 (213)
T ss_pred ccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHh--cCCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCH
Confidence 2 234567999999999999999999998764211 12233344566888999999988777765 58999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 139 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 139 GQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999877899999999975 566789999999864
No 171
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=343.46 Aligned_cols=218 Identities=26% Similarity=0.338 Sum_probs=179.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++++++... ....++|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 68999998774210 012469999999999999999999999999999999999865 35799999998763
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 Q-------STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
. ..+++.+|||+|++. .+...||+||+.|+.... ..+.++..+.++++++.++|. +..++.+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 234567999999862 233579999999875322 234444556789999999996 5566654 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 89999999999999999999999999999999999999999999999764 899999999986 57788999999985 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 88888875
No 172
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2e-35 Score=330.12 Aligned_cols=208 Identities=25% Similarity=0.291 Sum_probs=174.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 57888887652 12468999999999999999999999999999999999865 35899999998754
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. .+++.++|++|++.+++..|++||+.+..... ..+.++..+.++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 14567999999998889999999998865432 2233444556788999999987777655 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
||||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++...+|++++|++| ++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~G-~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSDG-HL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999999999999999999999999999999998777899999999986 466778999999864 54
No 173
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=339.99 Aligned_cols=207 Identities=26% Similarity=0.364 Sum_probs=173.3
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDN 238 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~ 238 (1427)
.+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 457999999999999999999999999999999999999875 899999999875421 1357999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+++.+||+||+.++....+.. ..+ ....++++++.+||++..++.
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVP-----------RAE------------------------REERAAEALELVGLEGWEHKY 157 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCCHhHhhCC
Confidence 888999999999875432210 000 011356788999997654444
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
++.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|++++++.|+|+|++.|+ ..++.++||++
T Consensus 158 -----~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~-~~~~~~~~d~v 231 (269)
T cd03294 158 -----PDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHD-LDEALRLGDRI 231 (269)
T ss_pred -----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhcCEE
Confidence 456999999999999999999999999999999999999999999999876568899987554 56778999999
Q ss_pred EEEeCCeEEEecChHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~ 416 (1427)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988775
No 174
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=343.96 Aligned_cols=218 Identities=25% Similarity=0.353 Sum_probs=179.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 78999998774210 0123589999999999999999999999999999999998653 4799999886531
Q ss_pred ---------------------------cccccceEEEEccCC-CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHH
Q 000555 907 ---------------------------QSTFARISGYVEQND-IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVM 958 (1427)
Q Consensus 907 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l 958 (1427)
...+++.+|||+|++ ..+...||+|++.|+.... ..+.++..+++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999999875432 234555567789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000555 959 RLVELD-SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1037 (1427)
Q Consensus 959 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1037 (1427)
+.+||. +..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5666654 5899999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1038 PSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1038 ~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+. .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 75 47788999999986 688888875
No 175
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-36 Score=318.32 Aligned_cols=207 Identities=27% Similarity=0.392 Sum_probs=179.8
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCccc----ccceEEEEccCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQST----FARISGYVEQNDIHSP 925 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~~~~~~ 925 (1427)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +.+|+|.++|.++.... .+.-++.-+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 45679999999999999999999999999999999999876 35799999999875432 2445788899999999
Q ss_pred CCCHHHHHHHHHhccC--------Cc-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000555 926 QVTVEESLWFSANLRL--------SK-EVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVAN 996 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~--------~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~ 996 (1427)
.+||.||+..++..+. +. ....++..+++.++++.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 11 11345556778999999999999999885 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 997 PSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 997 p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
|++|+||||.+||.+.....+.+.|+++.+ .|.||+++-|+.+. ++.+||||+||+. |+++..|++.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 999999999999999999999999999987 46999999999984 8999999999986 6888888863
No 176
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=345.67 Aligned_cols=218 Identities=26% Similarity=0.378 Sum_probs=179.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 489999998774210 012459999999999999999999999999999999999865 3579999999765
Q ss_pred Cc-------------------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc
Q 000555 906 EQ-------------------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD 964 (1427)
Q Consensus 906 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~ 964 (1427)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13467899999986 4555 59999998864321 234444556788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000555 965 -SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1043 (1427)
Q Consensus 965 -~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1043 (1427)
+..+..+ .+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 4555543 589999999999999999999999999999999999999999999998777999999999975 466
Q ss_pred HhhceEEEEecCcEEEEccCC
Q 000555 1044 EAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1044 ~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 78999999986 688888875
No 177
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=344.55 Aligned_cols=218 Identities=22% Similarity=0.333 Sum_probs=176.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCC-
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDN- 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~- 238 (1427)
.++|+|||++|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 46999999999999999999999999999999999999876 89999999987421 23467999999852
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-ccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSET 317 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 317 (1427)
.+...||+||+.|+.+..+.. .. +...+++++++.+||. ...
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gL~~~~~-- 139 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS-----------EE------------------------DAKQKAREMIELVGLPEELL-- 139 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHCCCChhhh--
Confidence 344579999999875433210 00 0012367789999996 333
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
++.++.|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.++.|.|||++. |...++.++||+
T Consensus 140 ---~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiit-Hd~~~~~~~~dr 215 (290)
T PRK13634 140 ---ARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVT-HSMEDAARYADQ 215 (290)
T ss_pred ---hCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCE
Confidence 3455679999999999999999999999999999999999999999999999776689999875 455678899999
Q ss_pred EEEEeCCeEEEecChHHHHH---HHHhcCCCCCC
Q 000555 398 LLLLSEGHLVYQGPRAEVLE---FFESLGFQLPP 428 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 428 (1427)
|++|++|++++.|+++++.+ .+...+..+|.
T Consensus 216 v~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 216 IVVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 99999999999999988752 34445555444
No 178
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=334.42 Aligned_cols=210 Identities=25% Similarity=0.398 Sum_probs=171.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 46999999999999999999999999999999999999875 999999999875432 24579999999988888999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.++....+.. .. +..+ .....++.+++.+||++..+ +.+.
T Consensus 92 ~e~l~~~~~~~~~~-~~-----------------~~~~-------------~~~~~~~~~l~~~~l~~~~~-----~~~~ 135 (239)
T cd03296 92 FDNVAFGLRVKPRS-ER-----------------PPEA-------------EIRAKVHELLKLVQLDWLAD-----RYPA 135 (239)
T ss_pred HHHHhhhhhhcccc-cc-----------------CCHH-------------HHHHHHHHHHHHcCChhhhh-----cChh
Confidence 99999865432110 00 0000 00113567889999965443 3455
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.++||++++|++|+
T Consensus 136 ~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~-~~~~~~~~d~i~~l~~G~ 214 (239)
T cd03296 136 QLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHD-QEEALEVADRVVVMNKGR 214 (239)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEEECCe
Confidence 7999999999999999999999999999999999999999999999876558899987655 466788999999999999
Q ss_pred EEEecChHHHH
Q 000555 406 LVYQGPRAEVL 416 (1427)
Q Consensus 406 iv~~G~~~~~~ 416 (1427)
+++.|+++++.
T Consensus 215 i~~~~~~~~~~ 225 (239)
T cd03296 215 IEQVGTPDEVY 225 (239)
T ss_pred EEEecCHHHHh
Confidence 99999988764
No 179
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.1e-35 Score=331.53 Aligned_cols=212 Identities=29% Similarity=0.441 Sum_probs=176.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 56788877652 2468999999999999999999999999999999999865 35799999998754
Q ss_pred cc--cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 QS--TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~~--~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
.. ..++.++|++|++.+++.+|++||+.+....+ .....+..+.++++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22357899999998889999999998765432 2233344556888999999988777765 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + ..+|++++|++ |+++..|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999875 58999999999863 4 45999999986 67777776
Q ss_pred C
Q 000555 1064 L 1064 (1427)
Q Consensus 1064 ~ 1064 (1427)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 180
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=341.38 Aligned_cols=217 Identities=26% Similarity=0.360 Sum_probs=179.4
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 6889999877411 0012358999999999999999999999999999999999865 35799999998763
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000555 907 Q-------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGS 976 (1427)
Q Consensus 907 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 976 (1427)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++..+++.++++.++|. +..+..+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 23466799999986 4444 69999999875322 234455667789999999996 4556554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 589999999999999999999999999999999999999999999999877999999999975 46778999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 88888875
No 181
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=342.94 Aligned_cols=226 Identities=25% Similarity=0.345 Sum_probs=181.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCC-C
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTD-N 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~-~ 238 (1427)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+++.. ..++.++||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 95 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPES 95 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcch
Confidence 35999999999999999999999999999999999999886 99999999987421 2356799999986 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
.+...||.||+.|+.+..+.. +. + ...++.++++.+||.+.
T Consensus 96 ~l~~~tv~~~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~L~~~---- 136 (288)
T PRK13643 96 QLFEETVLKDVAFGPQNFGIP-----------KE----------K--------------AEKIAAEKLEMVGLADE---- 136 (288)
T ss_pred hcccchHHHHHHhHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCCChh----
Confidence 444579999999976543220 00 0 01235678889999521
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
..++.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .|+|||+++| ...++.++||+|
T Consensus 137 ~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vtH-d~~~~~~~~dri 214 (288)
T PRK13643 137 FWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVTH-LMDDVADYADYV 214 (288)
T ss_pred hccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEec-CHHHHHHhCCEE
Confidence 12345678999999999999999999999999999999999999999999999865 4889999755 456788999999
Q ss_pred EEEeCCeEEEecChHHHH---HHHHhcCCCCCCCCChHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVL---EFFESLGFQLPPRKGVADFL 436 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad~l 436 (1427)
++|++|+++++|+++++. +.++..|+.+|.....++.+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 999999999999999875 34566788777655444444
No 182
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.3e-35 Score=331.20 Aligned_cols=217 Identities=25% Similarity=0.311 Sum_probs=171.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+... .....+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5788888765310 001368999999999999999999999999999999999865 35799999998764
Q ss_pred c------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 Q------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
. ..+++.++|++|++ .+++.+||+||+.+....... ....+.....++++++.+++. +..+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 23456799999998 466789999999876543211 111111122235788999985 4556554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+...+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999975 46668999999986 5
Q ss_pred EEEEcc
Q 000555 1057 RVIYGG 1062 (1427)
Q Consensus 1057 ~~~~~g 1062 (1427)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 666543
No 183
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.9e-35 Score=344.75 Aligned_cols=206 Identities=29% Similarity=0.378 Sum_probs=172.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999876 99999999987432 23567999999998888999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+.....+.. .. + ....++.+++.+||++..++.+
T Consensus 94 v~e~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~ll~~~~l~~~~~~~~----- 133 (303)
T TIGR01288 94 VRENLLVFGRYFGMS-----------TR----------E--------------IEAVIPSLLEFARLESKADVRV----- 133 (303)
T ss_pred HHHHHHHHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHCCChhHhcCch-----
Confidence 999998754332210 00 0 0112456788999986555544
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++++ .|+|||++. |...++.++||+|++|++|
T Consensus 134 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~s-H~~~~~~~~~d~i~~l~~G 211 (303)
T TIGR01288 134 ALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVLESG 211 (303)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999999865 488999875 4556888999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++++.|+++++..
T Consensus 212 ~i~~~g~~~~~~~ 224 (303)
T TIGR01288 212 RKIAEGRPHALID 224 (303)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998754
No 184
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-35 Score=329.10 Aligned_cols=193 Identities=29% Similarity=0.434 Sum_probs=163.4
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc---ccccceEEEEccCCC-CCCCC
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQNDI-HSPQV 927 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~-~~~~l 927 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 468999999999999999999999999999999999765 357999999987542 234567999999974 46779
Q ss_pred CHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000555 928 TVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1427)
Q Consensus 928 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTs 1007 (1427)
|++||+.+..... .....+..+.++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 1233344456788999999987777665 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 1008 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999975 466679999999864
No 185
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3e-35 Score=328.50 Aligned_cols=210 Identities=26% Similarity=0.358 Sum_probs=172.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.. ...+++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5678888765311 112469999999999999999999999999999999999865 35799999998754
Q ss_pred cc---c---cc-ceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000555 907 QS---T---FA-RISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGL 979 (1427)
Q Consensus 907 ~~---~---~~-~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 979 (1427)
.. . ++ +.++|++|++.+++.+||+||+.+....+ .....+..+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIG---KKSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 56999999998999999999998865432 1222333456788999999987777665 479
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 980 SgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 99999999999999999999999999999999999999999999876 4899999999975 34 55799999986 454
No 186
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=341.77 Aligned_cols=217 Identities=25% Similarity=0.354 Sum_probs=177.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCC-CCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTD-NHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~-~~~~~ 242 (1427)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999886 99999999988542 2356799999987 36778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.||+||+.|+.+..+.. .. +...+++++++.+||++..+ +
T Consensus 97 ~tv~eni~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gL~~~~~-----~ 136 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP-----------HE------------------------EMKERVNEALELVGMQDFKE-----R 136 (279)
T ss_pred ccHHHHHHhhHHhCCCC-----------HH------------------------HHHHHHHHHHHHCCCHhHhh-----C
Confidence 89999999875432210 00 00123677899999975444 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++++.|+|+|++.|+. .++ ..||+|++|+
T Consensus 137 ~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~-~~~-~~~dri~~l~ 214 (279)
T PRK13650 137 EPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDL-DEV-ALSDRVLVMK 214 (279)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEE
Confidence 45679999999999999999999999999999999999999999999999776689999976664 455 5899999999
Q ss_pred CCeEEEecChHHHHH---HHHhcCCCCCC
Q 000555 403 EGHLVYQGPRAEVLE---FFESLGFQLPP 428 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~---~f~~~G~~~p~ 428 (1427)
+|+++..|+++++.. .++..|+..|.
T Consensus 215 ~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 243 (279)
T PRK13650 215 NGQVESTSTPRELFSRGNDLLQLGLDIPF 243 (279)
T ss_pred CCEEEEECCHHHHHcChHHHHHcCCCCcH
Confidence 999999999988763 34455655443
No 187
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-35 Score=329.64 Aligned_cols=198 Identities=28% Similarity=0.429 Sum_probs=163.3
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCC--CCCCH
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHS--PQVTV 929 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 929 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. +.+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 458999999999999999999999999999999999765 35799999998653 3456799999998663 34899
Q ss_pred HHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000555 930 EESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1008 (1427)
Q Consensus 930 ~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsg 1008 (1427)
+||+.+....... .....++..+.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112233456889999999987777665 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 1009 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 1009 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~ 212 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVAS 212 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-Eeec
Confidence 9999999999999998877899999999976 46778999999975 5 4443
No 188
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=341.04 Aligned_cols=218 Identities=22% Similarity=0.351 Sum_probs=179.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|... +..|+|.++|.++
T Consensus 2 ~l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i 71 (286)
T PRK13646 2 TIRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITI 71 (286)
T ss_pred EEEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 378999998774210 012469999999999999999999999999999999999865 3579999999876
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000555 906 EQ-------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPG 975 (1427)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 975 (1427)
.. ..+++.+|||+|++ .+++ .||+||+.|..... ..+.++..+.++++++.+||. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~---- 143 (286)
T PRK13646 72 THKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSP---- 143 (286)
T ss_pred ccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 32 13567899999986 3554 59999999864321 234455566788999999996 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 -~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~ 221 (286)
T PRK13646 144 -FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE 221 (286)
T ss_pred -ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 58999999999999999999999999999999999999999999999975 4899999999975 46778999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 222 -G~i~~~g~~ 230 (286)
T PRK13646 222 -GSIVSQTSP 230 (286)
T ss_pred -CEEEEECCH
Confidence 678888764
No 189
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=329.51 Aligned_cols=201 Identities=27% Similarity=0.378 Sum_probs=168.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999875 9999999988753 356799999998888889999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||+.++....+.. ..+ ....++.+++.+||++..+. .+..
T Consensus 92 e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~ 131 (220)
T cd03293 92 DNVALGLELQGVP-----------KAE------------------------ARERAEELLELVGLSGFENA-----YPHQ 131 (220)
T ss_pred HHHHHHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCChhhhhC-----Cccc
Confidence 9999875433210 000 01135678899999754443 3457
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe--CC
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS--EG 404 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~--~G 404 (1427)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.++||++++|+ +|
T Consensus 132 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~~~G 210 (220)
T cd03293 132 LSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHD-IDEAVFLADRVVVLSARPG 210 (220)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecC-HHHHHHhCCEEEEEECCCC
Confidence 999999999999999999999999999999999999999999999876568899987555 457788999999999 79
Q ss_pred eEEEecChH
Q 000555 405 HLVYQGPRA 413 (1427)
Q Consensus 405 ~iv~~G~~~ 413 (1427)
+++..++.+
T Consensus 211 ~i~~~~~~~ 219 (220)
T cd03293 211 RIVAEVEVD 219 (220)
T ss_pred EEEEEEEec
Confidence 999988753
No 190
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=334.41 Aligned_cols=206 Identities=22% Similarity=0.314 Sum_probs=175.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 489999988663 2458999999999999999999999999999999999865 3579999998765
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
. .+++.++|++|++.+++.+||+||+.+... . ...+.+.++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 345679999999999999999999987421 0 12345788999999988777665 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ .|+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999976 46678999999986 678877764
No 191
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=333.34 Aligned_cols=214 Identities=27% Similarity=0.384 Sum_probs=179.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67888887652 2468999999999999999999999999999999999865 35799999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 QS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
.. ..++.++|++|++.+++.+||+||+.+...++. ..+.++....++++++.+++.+..+..+ +.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 31 134679999999999999999999987643321 1233344567889999999987766654 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||++|+.+|++|+|||||+|||+.+...+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999975 57788999999986 6788877
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 65
No 192
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-35 Score=333.39 Aligned_cols=214 Identities=26% Similarity=0.336 Sum_probs=176.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECCc
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISGY 903 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 903 (1427)
++++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 57888887653 235899999999999999999999999999999999976531 12799999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000555 904 PKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGFP 974 (1427)
Q Consensus 904 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 974 (1427)
+... ...++.++|++|++.+++ .|++||+.+....+. ..+..+..+.++++++.++|. +..+..+
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 142 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA--- 142 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc---
Confidence 7642 234567999999998888 999999988754331 123344456788999999997 5555544
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 143 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 143 --LGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 58999999999999999999999999999999999999999999999876 489999999975 46778999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 677777764
No 193
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=332.61 Aligned_cols=205 Identities=27% Similarity=0.369 Sum_probs=172.2
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHIP 241 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~~ 241 (1427)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999875 899999999875421 2467999999998888
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
.+||+||+.++....+.. ..+ ....+++.++.+||++..+.
T Consensus 96 ~~t~~e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~---- 136 (233)
T cd03258 96 SRTVFENVALPLEIAGVP-----------KAE------------------------IEERVLELLELVGLEDKADA---- 136 (233)
T ss_pred CCcHHHHHHHHHHHcCCC-----------HHH------------------------HHHHHHHHHHHCCChhhhhc----
Confidence 999999998865432210 000 01135678899999754443
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.+++|++++|
T Consensus 137 -~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~-~~~~~~~~d~i~~l 214 (233)
T cd03258 137 -YPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHE-MEVVKRICDRVAVM 214 (233)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEE
Confidence 4457999999999999999999999999999999999999999999999876568899987655 56778899999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (233)
T cd03258 215 EKGEVVEEGTVEEVF 229 (233)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 194
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=339.58 Aligned_cols=215 Identities=27% Similarity=0.393 Sum_probs=180.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ .++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 589999998763 12458999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000555 906 EQ-----STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGL 979 (1427)
Q Consensus 906 ~~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 979 (1427)
.. ..+++.+||++|++. .+...||+||+.+..... ..+.++..+.++++++.++|.+..++.+ +.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 31 235567999999873 334689999998864321 2344455567899999999998877765 589
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 980 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 980 SgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
|||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999975 46668999999986 678
Q ss_pred EEccCC
Q 000555 1059 IYGGKL 1064 (1427)
Q Consensus 1059 ~~~g~~ 1064 (1427)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 888875
No 195
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.2e-35 Score=333.02 Aligned_cols=215 Identities=26% Similarity=0.394 Sum_probs=172.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
.++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 46999999999999999999999999999999999999875 899999999876432 13569999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++....... . ..+. . ..... ......++++++.+||++..+ +
T Consensus 90 ~tv~~~l~~~~~~~~~~-~---~~~~-------~-~~~~~-------------~~~~~~~~~~l~~~~l~~~~~-----~ 139 (236)
T cd03219 90 LTVLENVMVAAQARTGS-G---LLLA-------R-ARREE-------------REARERAEELLERVGLADLAD-----R 139 (236)
T ss_pred CCHHHHHHHHHhhcccc-c---cccc-------c-ccccH-------------HHHHHHHHHHHHHcCccchhh-----C
Confidence 99999999875432110 0 0000 0 00000 001123677889999975443 4
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ ..++.++||++++|+
T Consensus 140 ~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~-~~~~~~~~d~i~~l~ 217 (236)
T cd03219 140 PAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHD-MDVVMSLADRVTVLD 217 (236)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecC-HHHHHHhCCEEEEEe
Confidence 4567999999999999999999999999999999999999999999999876 58899887554 567788999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|++++.|+++++.
T Consensus 218 ~G~i~~~~~~~~~~ 231 (236)
T cd03219 218 QGRVIAEGTPDEVR 231 (236)
T ss_pred CCEEEeecCHHHhc
Confidence 99999999988764
No 196
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=351.14 Aligned_cols=207 Identities=22% Similarity=0.331 Sum_probs=175.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~ 239 (1427)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999886 999999999876432 13579999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.|+.+..+... .+ ...+++++++.+||++..
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~-----------~~------------------------~~~~~~e~L~~~gL~~~~---- 158 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA-----------EE------------------------RREKALDALRQVGLENYA---- 158 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH-----------HH------------------------HHHHHHHHHHHcCCChhh----
Confidence 999999999999765433200 00 011356789999997544
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
++.++.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++.++|+|++. |...++.+++|+|+
T Consensus 159 -~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivT-Hd~~~~~~~~Dri~ 236 (400)
T PRK10070 159 -HSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFIS-HDLDEAMRIGDRIA 236 (400)
T ss_pred -hcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEE-CCHHHHHHhCCEEE
Confidence 3455679999999999999999999999999999999999999999999998766689999875 45678889999999
Q ss_pred EEeCCeEEEecChHHHHH
Q 000555 400 LLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~~ 417 (1427)
+|++|+++..|+++++..
T Consensus 237 vL~~G~i~~~g~~~~l~~ 254 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILN 254 (400)
T ss_pred EEECCEEEecCCHHHHHh
Confidence 999999999999988753
No 197
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=334.56 Aligned_cols=214 Identities=22% Similarity=0.295 Sum_probs=179.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 378999987663 2468999999999999999999999999999999999865 3579999999865
Q ss_pred Cc----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHh-ccCCcCCCHHHHHHHHHHHHHHcCCcccc-
Q 000555 906 EQ----------------STFARISGYVEQNDIHSPQVTVEESLWFSAN-LRLSKEVSKNQRHEFVEEVMRLVELDSLR- 967 (1427)
Q Consensus 906 ~~----------------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~-l~~~~~~~~~~~~~~v~~~l~~l~L~~~~- 967 (1427)
.. ..+++.++|++|++.+++.+||+||+.+... .. .....+..+.+.++++.+++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1345679999999999999999999987532 21 123344556788999999997653
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Q 000555 968 DALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1047 (1427)
Q Consensus 968 ~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1047 (1427)
+..+ ..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ .+...+|
T Consensus 147 ~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKYP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 5443 589999999999999999999999999999999999999999999999877999999999975 4666799
Q ss_pred eEEEEecCcEEEEccCC
Q 000555 1048 ELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1048 ~v~~l~~gg~~~~~g~~ 1064 (1427)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999986 677787764
No 198
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1e-35 Score=312.72 Aligned_cols=212 Identities=24% Similarity=0.426 Sum_probs=191.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
+++++|+-+. +++.+++|+||.++||++.|++|+|||||||.+++|.|... +.+|.|.++|.+.+
T Consensus 3 L~ie~vtK~F-------------g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~ 67 (300)
T COG4152 3 LEIEGVTKSF-------------GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLS 67 (300)
T ss_pred eEEecchhcc-------------CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchh
Confidence 5677775433 46789999999999999999999999999999999999876 35899999999886
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 907 QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
.. .+.+|||.|.+.-++|.+||.|.|.|-+.++ .++.++....++.+|+.+++.......| +.||.|++|+
T Consensus 68 ~~-~~~rIGyLPEERGLy~k~tv~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQK 138 (300)
T COG4152 68 QE-IKNRIGYLPEERGLYPKMTVEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQK 138 (300)
T ss_pred hh-hhhhcccChhhhccCccCcHHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHH
Confidence 53 4567899999999999999999999999986 5677888888999999999999888877 5899999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+.+-.+++++|++++||||+|||||.+.+.+-+.+.++.+.|.|||+++|++. .+.++||++++|++ |+.+..|++
T Consensus 139 IQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 139 IQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred HHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 99999999999999999999999999999999999999999999999999986 68999999999986 677777876
No 199
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.3e-35 Score=342.77 Aligned_cols=229 Identities=21% Similarity=0.267 Sum_probs=183.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++..++................+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 489999987775321100000011235799999999999999999999999999999999998653 579999999876
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000555 906 EQS------TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGS 976 (1427)
Q Consensus 906 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 976 (1427)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++..+.++++++.++|. +..+...
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p----- 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRYP----- 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCCc-----
Confidence 431 2456799999997 58899999999988654321 1234556667788999999994 3455544
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++||+++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 589999999999999999999999999999999999999999999999764 899999999976 46678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 688888875
No 200
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=331.85 Aligned_cols=212 Identities=24% Similarity=0.344 Sum_probs=176.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 478999987652 2468999999999999999999999999999999999865 3579999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000555 906 EQS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLV-ELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 906 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 980 (1427)
... ..++.++|++|+..+++.+||.||+.+..... ..++..+.++++++.+ ++.+..+..+ ..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 432 23567999999999999999999998764221 1222334567777777 4665555543 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999975 57888999999986 68888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 8875
No 201
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.4e-35 Score=333.64 Aligned_cols=214 Identities=25% Similarity=0.335 Sum_probs=178.8
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 36788887652 2468999999999999999999999999999999999865 35799999998653
Q ss_pred c----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccccccc
Q 000555 907 Q----------------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDAL 970 (1427)
Q Consensus 907 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 970 (1427)
. ..+++.++|++|++.+++..|+.||+.+..... ......+..+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 124567999999999999999999998753211 1123344456688999999998777765
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceE
Q 000555 971 VGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1049 (1427)
Q Consensus 971 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1049 (1427)
. ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++...+|++
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 579999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred EEEecCcEEEEccCC
Q 000555 1050 LLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1050 ~~l~~gg~~~~~g~~ 1064 (1427)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 678887764
No 202
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.1e-35 Score=342.51 Aligned_cols=205 Identities=25% Similarity=0.390 Sum_probs=174.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.+||++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999876 99999999987542 23567999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|.+++.+... . +...+++++++.+||++..+.. +
T Consensus 92 v~e~l~~~~~~~~~~~-----------~------------------------~~~~~~~~~l~~~gl~~~~~~~-----~ 131 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG-----------Q------------------------LLKQRVEEMIELVGLRPEQHKK-----I 131 (301)
T ss_pred HHHHHHHHHHHcCCCH-----------H------------------------HHHHHHHHHHHHCCCchHhcCc-----h
Confidence 9999998765543200 0 0011357789999998765544 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+.|||||||||+||+||+++|++++|||||+|||+.++..+.+.|+++. + ++|||++. |..+++.++||+|++|++|
T Consensus 132 ~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~-~-~~tiii~s-H~l~~~~~~~d~i~~l~~G 208 (301)
T TIGR03522 132 GQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG-K-DKTIILST-HIMQEVEAICDRVIIINKG 208 (301)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc-C-CCEEEEEc-CCHHHHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999984 3 68988875 5567899999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++++.|+.+++..
T Consensus 209 ~i~~~g~~~~~~~ 221 (301)
T TIGR03522 209 KIVADKKLDELSA 221 (301)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999998765
No 203
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.8e-35 Score=326.91 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=167.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++..||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 36999999999999999999999999999999999999875 999999999875432 23579999999888888999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.++.+..+.. ..+ ....++++++.+||++..+. .++
T Consensus 90 ~~~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-----~~~ 129 (213)
T cd03301 90 YDNIAFGLKLRKVP-----------KDE------------------------IDERVREVAELLQIEHLLDR-----KPK 129 (213)
T ss_pred HHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCCHHHHhC-----Chh
Confidence 99998865432210 000 01135678889999765444 445
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.++||++++|++|+
T Consensus 130 ~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~-~~~~~~~~d~i~~l~~g~ 208 (213)
T cd03301 130 QLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHD-QVEAMTMADRIAVMNDGQ 208 (213)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeEEEEECCE
Confidence 6999999999999999999999999999999999999999999999876568899987655 567888999999999999
Q ss_pred EEEec
Q 000555 406 LVYQG 410 (1427)
Q Consensus 406 iv~~G 410 (1427)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03301 209 IQQIG 213 (213)
T ss_pred EEecC
Confidence 99876
No 204
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-35 Score=330.88 Aligned_cols=205 Identities=23% Similarity=0.364 Sum_probs=170.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999875 899999999875432 23569999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.+.....+.. .. .....++.+++.+||++..+ +
T Consensus 90 ~tv~~~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~-----~ 129 (232)
T cd03218 90 LTVEENILAVLEIRGLS-----------KK------------------------EREEKLEELLEEFHITHLRK-----S 129 (232)
T ss_pred CcHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCChhhhh-----C
Confidence 99999998864322110 00 00113567888999975444 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|+ ..++.+++|++++|+
T Consensus 130 ~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~-~~~~~~~~d~i~~l~ 207 (232)
T cd03218 130 KASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHN-VRETLSITDRAYIIY 207 (232)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999875 48898887554 558889999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|++++.|+.+++.
T Consensus 208 ~G~i~~~~~~~~~~ 221 (232)
T cd03218 208 EGKVLAEGTPEEIA 221 (232)
T ss_pred CCeEEEEeCHHHhh
Confidence 99999999988764
No 205
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=338.06 Aligned_cols=216 Identities=25% Similarity=0.347 Sum_probs=181.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37899998876311 12458999999999999999999999999999999999865 3589999999876
Q ss_pred Cc---ccccceEEEEccCC-CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQND-IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+||++|++ ..++..||+||+.|..... ..+.++..+.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 23456799999997 3677889999998875322 2345555667899999999998777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++||+||+.+|++|+|||||+|||+.+...+++.|++++++ |+|||+++|++. .+ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999975 34 57999999986 68888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 8775
No 206
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.8e-35 Score=325.98 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=176.0
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 5677776542 2468999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHH
Q 000555 908 STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRL 987 (1427)
Q Consensus 908 ~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl 987 (1427)
.. .+.++|++|++.+++.+|++||+.+....+. .. .+.+.++++.+++++..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2568999999998999999999987654321 11 234778899999988777765 47999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 988 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 988 ~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
+||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. .+.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999777899999999986 46778999999986 6888888763
No 207
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.5e-35 Score=331.39 Aligned_cols=219 Identities=22% Similarity=0.272 Sum_probs=175.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35788877652 24689999999999999999999999999999999997311135799999998754
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCC--c--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 QS---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLS--K--EVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~--~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
.. . .+..++|++|++.+++.+|++|++.+....... . ..+..+..+.++++++.++|. ...+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 1 223489999999999999999999876432211 0 112233345688999999997 45555442 2
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gg 1056 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 59999999999999999999999999999999999999999999999877899999999975 45555 799999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 78888764
No 208
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.4e-35 Score=347.32 Aligned_cols=209 Identities=23% Similarity=0.318 Sum_probs=175.6
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCe----ecCcc---c---c-cceEEEE
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGY----KLDEF---H---V-QRTSAYI 233 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~---~---~-~~~~~yv 233 (1427)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|+++|+ ++... . . ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3567999999999999999999999999999999999999886 899999996 33221 1 1 2579999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcc
Q 000555 234 SQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDL 313 (1427)
Q Consensus 234 ~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 313 (1427)
+|++.+++.+||+||+.|+....+... .+ ...+++++++.+||++
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~-----------~~------------------------~~~~a~e~le~vgL~~ 156 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE-----------AE------------------------RRKRVDEQLELVGLAQ 156 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH-----------HH------------------------HHHHHHHHHHHcCCch
Confidence 999999999999999999865433210 00 0123577899999976
Q ss_pred ccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHh
Q 000555 314 CSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFD 393 (1427)
Q Consensus 314 ~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~ 393 (1427)
..+. .+..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.++.++|+|++. |...++.+
T Consensus 157 ~~~~-----~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iT-Hdl~e~~~ 230 (382)
T TIGR03415 157 WADK-----KPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVS-HDLDEALK 230 (382)
T ss_pred hhcC-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHH
Confidence 5444 45569999999999999999999999999999999999999999999998776689999965 55678889
Q ss_pred hcCcEEEEeCCeEEEecChHHHHH
Q 000555 394 LFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 394 ~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
++|+|++|++|+++..|+++++..
T Consensus 231 l~DrI~vl~~G~iv~~g~~~ei~~ 254 (382)
T TIGR03415 231 IGNRIAIMEGGRIIQHGTPEEIVL 254 (382)
T ss_pred hCCEEEEEECCEEEEecCHHHHhh
Confidence 999999999999999999998853
No 209
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.9e-35 Score=328.93 Aligned_cols=195 Identities=25% Similarity=0.351 Sum_probs=162.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999875 899999999875321 346799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++.+..+.. .. ....+++++++.+||++..+.
T Consensus 93 ~~~tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 134 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP-----------PR------------------------DANERVSAALEKVGLEGKAHA--- 134 (216)
T ss_pred ccccHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCChhhhhC---
Confidence 9999999999875432210 00 001235678899999754443
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.| ..+++.++||++++
T Consensus 135 --~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH-~~~~~~~~~d~i~~ 210 (216)
T TIGR00960 135 --LPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVATH-DINLVETYRHRTLT 210 (216)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhCCEEEE
Confidence 4457999999999999999999999999999999999999999999999865 4889888654 45677789999999
Q ss_pred EeCCeE
Q 000555 401 LSEGHL 406 (1427)
Q Consensus 401 L~~G~i 406 (1427)
|++|++
T Consensus 211 l~~G~i 216 (216)
T TIGR00960 211 LSRGRL 216 (216)
T ss_pred EeCCcC
Confidence 999975
No 210
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-36 Score=324.64 Aligned_cols=222 Identities=24% Similarity=0.368 Sum_probs=193.6
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDN 238 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~ 238 (1427)
...-++|+|++|+.||++.|||-||||||||+++|.++.+|+ +|+|+++|.++.... .++.++.|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 456789999999999999999999999999999999999986 999999999886532 3468999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
++|..||.||..|+.+.+|... .| .+.+..+.|+..||+...
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~-----------~e------------------------r~~~a~~~l~~VgL~~~~--- 158 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPK-----------AE------------------------REERALEALELVGLEGYA--- 158 (386)
T ss_pred cccchhHhhhhhcceeecCCCH-----------HH------------------------HHHHHHHHHHHcCchhhh---
Confidence 9999999999999999888632 11 122467789999998654
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+.++++||||+||||.|||||+.+|+|||||||+|+|||--+.++.+.|.++.++.++|||+ ++|+.+|.+++.|||
T Consensus 159 --~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvF-itHDLdEAlriG~rI 235 (386)
T COG4175 159 --DKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVF-ITHDLDEALRIGDRI 235 (386)
T ss_pred --hcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEE-EecCHHHHHhccceE
Confidence 45667899999999999999999999999999999999999999999998888889999999 478899999999999
Q ss_pred EEEeCCeEEEecChHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 000555 399 LLLSEGHLVYQGPRAEVLEFFESLGFQLPPRKGVADFLQEV 439 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 439 (1427)
.+|.+|+|+..|+++|++. .|...-+++|..++
T Consensus 236 aimkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 236 AIMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EEecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 9999999999999999974 45655567777654
No 211
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=338.46 Aligned_cols=219 Identities=26% Similarity=0.353 Sum_probs=179.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 71 (287)
T PRK13641 2 SIKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHI 71 (287)
T ss_pred EEEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 367899987663110 012468999999999999999999999999999999999865 3589999999875
Q ss_pred Cc-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000555 906 EQ-------STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGS 976 (1427)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 976 (1427)
.. ...++.+||++|++. .+..+||+||+.+..... ....++..++++++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (287)
T PRK13641 72 TPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP----- 143 (287)
T ss_pred ccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----
Confidence 32 124567999999962 333589999998765322 233445556789999999997 5667665
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |
T Consensus 144 ~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G 221 (287)
T PRK13641 144 FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-G 221 (287)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 489999999999999999999999999999999999999999999999777999999999975 47788999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (287)
T PRK13641 222 KLIKHASP 229 (287)
T ss_pred EEEEeCCH
Confidence 78888764
No 212
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=330.59 Aligned_cols=214 Identities=26% Similarity=0.374 Sum_probs=178.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 66 (242)
T PRK11124 2 SIQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred EEEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEec
Confidence 367889887653 2458999999999999999999999999999999999865 3579999999864
Q ss_pred C---------cccccceEEEEccCCCCCCCCCHHHHHHHH-HhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000555 906 E---------QSTFARISGYVEQNDIHSPQVTVEESLWFS-ANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPG 975 (1427)
Q Consensus 906 ~---------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~-~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 975 (1427)
. ....++.++|++|++.+++.+||.||+.+. .... .....+..+.+.++++.+|+.+..+..+
T Consensus 67 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 139 (242)
T PRK11124 67 DFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP---- 139 (242)
T ss_pred ccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh----
Confidence 2 012356799999999999999999999753 2221 1223334556889999999987777765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|.+
T Consensus 140 -~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~- 216 (242)
T PRK11124 140 -LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN- 216 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999998777999999999975 46677999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 217 g~i~~~~~~ 225 (242)
T PRK11124 217 GHIVEQGDA 225 (242)
T ss_pred CEEEEeCCH
Confidence 688888764
No 213
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=331.46 Aligned_cols=217 Identities=24% Similarity=0.284 Sum_probs=177.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14247 3 KIEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDG 69 (250)
T ss_pred eEEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECC
Confidence 378899987652 245899999999999999999999999999999999976421 3589999999
Q ss_pred ccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000555 903 YPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGFPG 975 (1427)
Q Consensus 903 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~ 975 (1427)
.++.. ..+++.+||++|++.+++.+||+||+.+....+.. .....+..+.++++++.++|.+ ..++.+
T Consensus 70 ~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~---- 144 (250)
T PRK14247 70 QDIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAPA---- 144 (250)
T ss_pred EECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc----
Confidence 87642 23456799999999888999999999886543211 1123344566888999999854 234433
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. .+.+.+|++++|++
T Consensus 145 -~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~- 220 (250)
T PRK14247 145 -GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK- 220 (250)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 58999999999999999999999999999999999999999999999864 899999999986 46778999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++...|+.
T Consensus 221 G~i~~~g~~ 229 (250)
T PRK14247 221 GQIVEWGPT 229 (250)
T ss_pred CeEEEECCH
Confidence 678887764
No 214
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=332.16 Aligned_cols=214 Identities=27% Similarity=0.403 Sum_probs=171.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999875 899999999875432 346799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++...... ...... +..+ ......++.+++.+||.+..+
T Consensus 91 ~~~tv~~~l~~~~~~~~~--~~~~~~----------~~~~---------------~~~~~~~~~~l~~~~l~~~~~---- 139 (241)
T cd03256 91 ERLSVLENVLSGRLGRRS--TWRSLF----------GLFP---------------KEEKQRALAALERVGLLDKAY---- 139 (241)
T ss_pred ccCcHHHHHHhhhcccch--hhhhhc----------ccCc---------------HHHHHHHHHHHHHcCChhhhC----
Confidence 999999999875321100 000000 0000 000123567889999975433
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++++.|+|+|++.|+ ..++.++||++++
T Consensus 140 -~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~-~~~~~~~~d~v~~ 217 (241)
T cd03256 140 -QRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQ-VDLAREYADRIVG 217 (241)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEE
Confidence 34567999999999999999999999999999999999999999999999876568899987554 5678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 218 LKDGRIVFDGPPAELT 233 (241)
T ss_pred EECCEEEeecCHHHhh
Confidence 9999999999998764
No 215
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=329.22 Aligned_cols=201 Identities=21% Similarity=0.312 Sum_probs=165.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------c-cceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------V-QRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~-~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|+++|+++.... . ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999875 999999999876432 1 2569999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.+.....+.. .. ..+.+++++++.+||++..++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gl~~~~~~-- 141 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK-----------PA------------------------EINSRALEMLAAVGLEHRANH-- 141 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCCchhhhC--
Confidence 89999999999865432110 00 001235678899999754443
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.+..|||||||||+||++++.+|+++||||||+|||+.+...+.+.|+++.++.|+|+|++.|++ .++. .+|+++
T Consensus 142 ---~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~-~~~~-~~~~~~ 216 (233)
T PRK11629 142 ---RPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDL-QLAK-RMSRQL 216 (233)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH-HHHH-hhCEEE
Confidence 34579999999999999999999999999999999999999999999998765588999976654 4544 468999
Q ss_pred EEeCCeEEEecCh
Q 000555 400 LLSEGHLVYQGPR 412 (1427)
Q Consensus 400 lL~~G~iv~~G~~ 412 (1427)
+|++|++++.|+.
T Consensus 217 ~l~~G~i~~~~~~ 229 (233)
T PRK11629 217 EMRDGRLTAELSL 229 (233)
T ss_pred EEECCEEEEEecc
Confidence 9999999988764
No 216
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=341.30 Aligned_cols=219 Identities=21% Similarity=0.325 Sum_probs=175.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc-----------------------
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE----------------------- 223 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 223 (1427)
.++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 36999999999999999999999999999999999999886 8999999875421
Q ss_pred ----ccccceEEEEccCC-CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcc
Q 000555 224 ----FHVQRTSAYISQTD-NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKH 298 (1427)
Q Consensus 224 ----~~~~~~~~yv~Q~~-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 298 (1427)
...++.+|||+|++ ..+...||+|||.|+....+.. . .+ .
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~-----------~----------~~--------------~ 141 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS-----------K----------EE--------------A 141 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC-----------H----------HH--------------H
Confidence 12356799999985 3455679999999976543220 0 00 0
Q ss_pred cccHHHHHHHhCCc-cccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 000555 299 SVSTDYVLKVLGLD-LCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMD 377 (1427)
Q Consensus 299 ~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~ 377 (1427)
..+++++++.+||+ +.. ++.+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|
T Consensus 142 ~~~~~~~l~~~gL~~~~~-----~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g 215 (305)
T PRK13651 142 KKRAAKYIELVGLDESYL-----QRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QG 215 (305)
T ss_pred HHHHHHHHHHcCCChhhh-----hCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CC
Confidence 12367789999996 323 455667999999999999999999999999999999999999999999999864 58
Q ss_pred cEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHH---HHHhcCCCCCCCC
Q 000555 378 ATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLE---FFESLGFQLPPRK 430 (1427)
Q Consensus 378 ~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~~~ 430 (1427)
+|||++. |..+++.++||+|++|++|++++.|+++++.. .+...|...|...
T Consensus 216 ~tiiivt-Hd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~ 270 (305)
T PRK13651 216 KTIILVT-HDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSDNKFLIENNMEPPKLL 270 (305)
T ss_pred CEEEEEe-eCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCHHHHHHCCCCCChHH
Confidence 9998864 55667889999999999999999999998753 3344555544433
No 217
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-35 Score=331.73 Aligned_cols=215 Identities=23% Similarity=0.287 Sum_probs=175.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 589999987663 235899999999999999999999999999999999976531 2479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.++.. ..+++.++|++|++.+++ +||+||+.+...... .....+..+.++++++.+++. +..++.+
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 148 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTNA-- 148 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCCc--
Confidence 87531 234667999999988775 899999988754321 112233456678888888873 3344443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+.||||||||++|||+|+.+|++|+|||||+|||+.+...+++.|+++. +++|||+++|+++ .+.+.+|++++|+
T Consensus 149 ---~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 149 ---LSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 5899999999999999999999999999999999999999999999986 4799999999986 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 6 688888764
No 218
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.7e-35 Score=327.25 Aligned_cols=203 Identities=27% Similarity=0.413 Sum_probs=167.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999875 899999998875432 24569999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh-CCcccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL-GLDLCSETVVGN 321 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~ 321 (1427)
+||+||+.++...... . .....++.+++.+ +++...+
T Consensus 90 ~t~~~~l~~~~~~~~~----~---------------------------------~~~~~~~~~l~~~~~l~~~~~----- 127 (222)
T cd03224 90 LTVEENLLLGAYARRR----A---------------------------------KRKARLERVYELFPRLKERRK----- 127 (222)
T ss_pred CcHHHHHHHHhhhcCc----h---------------------------------hHHHHHHHHHHHHHhhhhhhh-----
Confidence 9999999886432210 0 0001234556666 4554333
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.| ...++.++||++++|
T Consensus 128 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH-~~~~~~~~~d~i~~l 205 (222)
T cd03224 128 QLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQ-NARFALEIADRAYVL 205 (222)
T ss_pred CchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeC-CHHHHHHhccEEEEe
Confidence 34557999999999999999999999999999999999999999999999865 5789998755 456788999999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+.+++.
T Consensus 206 ~~G~i~~~~~~~~~~ 220 (222)
T cd03224 206 ERGRVVLEGTAAELL 220 (222)
T ss_pred eCCeEEEeCCHHHHh
Confidence 999999999988764
No 219
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.6e-35 Score=327.72 Aligned_cols=203 Identities=30% Similarity=0.431 Sum_probs=169.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999875 99999999987532 23567999999988888999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+..+..+... .+ ....++++++.+||++..++. +
T Consensus 92 v~~~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~l~~~~l~~~~~~~-----~ 131 (220)
T cd03263 92 VREHLRFYARLKGLPK-----------SE------------------------IKEEVELLLRVLGLTDKANKR-----A 131 (220)
T ss_pred HHHHHHHHHHHcCCCH-----------HH------------------------HHHHHHHHHHHcCCHHHHhCh-----h
Confidence 9999998654432100 00 011356788899997655444 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.|+ ..++.++||++++|++|
T Consensus 132 ~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~i~~l~~g 208 (220)
T cd03263 132 RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHS-MDEAEALCDRIAIMSDG 208 (220)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCC-HHHHHHhcCEEEEEECC
Confidence 56999999999999999999999999999999999999999999999864 5888887554 45777899999999999
Q ss_pred eEEEecChHHH
Q 000555 405 HLVYQGPRAEV 415 (1427)
Q Consensus 405 ~iv~~G~~~~~ 415 (1427)
++++.|+++++
T Consensus 209 ~i~~~~~~~~~ 219 (220)
T cd03263 209 KLRCIGSPQEL 219 (220)
T ss_pred EEEecCCHHHc
Confidence 99999998764
No 220
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-35 Score=325.23 Aligned_cols=198 Identities=24% Similarity=0.386 Sum_probs=165.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 46999999999999999999999999999999999999875 9999999987754 3456799999999888899999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||+.+..+..+... .+ ....++++++.+||+...++ .++.
T Consensus 89 e~l~~~~~~~~~~~---------------------~~--------------~~~~~~~~l~~~~l~~~~~~-----~~~~ 128 (210)
T cd03269 89 DQLVYLAQLKGLKK---------------------EE--------------ARRRIDEWLERLELSEYANK-----RVEE 128 (210)
T ss_pred HHHHHHHHHcCCCh---------------------HH--------------HHHHHHHHHHHcCChHHHhC-----cHhh
Confidence 99988654332100 00 01135678889999765444 3456
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeE
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHL 406 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~i 406 (1427)
|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.++ ++|+|++.| ...++.+++|++++|++|++
T Consensus 129 LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~-~~tii~~sH-~~~~~~~~~d~i~~l~~g~i 206 (210)
T cd03269 129 LSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARA-GKTVILSTH-QMELVEELCDRVLLLNKGRA 206 (210)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEECC-CHHHHHHhhhEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999998654 789988654 45677889999999999999
Q ss_pred EEec
Q 000555 407 VYQG 410 (1427)
Q Consensus 407 v~~G 410 (1427)
++.|
T Consensus 207 ~~~~ 210 (210)
T cd03269 207 VLYG 210 (210)
T ss_pred EecC
Confidence 8764
No 221
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=336.10 Aligned_cols=215 Identities=24% Similarity=0.320 Sum_probs=173.3
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCC-CCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDN-HIPEL 243 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~-~~~~l 243 (1427)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999876 999999999875432 3467999999863 45678
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.|+.+..+.. .. ....+++++++.+||.+..+. .
T Consensus 96 tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~L~~~~~~-----~ 135 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD-----------KD------------------------EVERRVEEALKAVRMWDFRDK-----P 135 (274)
T ss_pred cHHHHHHhhHHHcCCC-----------HH------------------------HHHHHHHHHHHHCCCHHHhcC-----C
Confidence 9999999865432210 00 001235678999999754444 4
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
+..|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|++++++ ++|+|++.| ..+++.++||+|++|++
T Consensus 136 ~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~tH-~~~~~~~~~d~i~~l~~ 213 (274)
T PRK13647 136 PYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVATH-DVDLAAEWADQVIVLKE 213 (274)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEeC-CHHHHHHhCCEEEEEEC
Confidence 5579999999999999999999999999999999999999999999998754 889998754 45677789999999999
Q ss_pred CeEEEecChHHHH--HHHHhcCCCCC
Q 000555 404 GHLVYQGPRAEVL--EFFESLGFQLP 427 (1427)
Q Consensus 404 G~iv~~G~~~~~~--~~f~~~G~~~p 427 (1427)
|++++.|+++++. +.++..|+.+|
T Consensus 214 G~i~~~g~~~~~~~~~~~~~~~~~~~ 239 (274)
T PRK13647 214 GRVLAEGDKSLLTDEDIVEQAGLRLP 239 (274)
T ss_pred CEEEEECCHHHhcCHHHHHHcCCCCC
Confidence 9999999987542 22334454443
No 222
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-35 Score=323.80 Aligned_cols=193 Identities=27% Similarity=0.392 Sum_probs=163.2
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000555 857 NVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-STFARISGYVEQNDIHSPQVTVEESLWF 935 (1427)
Q Consensus 857 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~ 935 (1427)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999865 357999999987643 1234679999999999999999999987
Q ss_pred HHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000555 936 SANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1015 (1427)
Q Consensus 936 ~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~ 1015 (1427)
....+. .. .++.++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1233456889999999988777765 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 1016 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 1016 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
.+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 210 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQ 210 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeec
Confidence 99999999875 4899999999975 46678999999986 566654
No 223
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-35 Score=331.67 Aligned_cols=214 Identities=27% Similarity=0.331 Sum_probs=175.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+. .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588999987652 24589999999999999999999999999999999997642 12589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.+||++|++.+++ +|++||+.+..... ..+.++..+.++++++.+++. +..++.+
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 152 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPA-- 152 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh--
Confidence 87532 134567999999988887 89999999875432 123334445678899999884 3334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 153 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 153 ---LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 57999999999999999999999999999999999999999999999864 799999999975 4667899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 6 688888764
No 224
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5.7e-35 Score=327.21 Aligned_cols=207 Identities=34% Similarity=0.574 Sum_probs=168.4
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCH
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV 245 (1427)
.+++|+|+|+++++||+++|+||||||||||+++|+|.+++..+.+|+|.++|+++.....++.++|++|++.+++.+||
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv 98 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTV 98 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcH
Confidence 35799999999999999999999999999999999999982111389999999987654556789999999989999999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHH-HHHHhCCccccccccccccC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDY-VLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~~t~vg~~~~ 324 (1427)
+||+.|+........ . .+.. .....+. .++.+++++. .++.+
T Consensus 99 ~enl~~~~~~~~~~~-~-------~~~~------------------------~~~~~~~~~l~~~~l~~~-----~~~~~ 141 (226)
T cd03234 99 RETLTYTAILRLPRK-S-------SDAI------------------------RKKRVEDVLLRDLALTRI-----GGNLV 141 (226)
T ss_pred HHHHHHHHHhhcccc-c-------chHH------------------------HHHHHHHHHHHhhcchhh-----hcccc
Confidence 999998754332100 0 0000 0011233 6778887643 34556
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ ++|+|++.|++..++.++||++++|++|
T Consensus 142 ~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~-~~tiii~sh~~~~~~~~~~d~i~~l~~G 220 (226)
T cd03234 142 KGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARR-NRIVILTIHQPRSDLFRLFDRILLLSSG 220 (226)
T ss_pred cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEecCCCHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999998654 8899998777656899999999999999
Q ss_pred eEEEec
Q 000555 405 HLVYQG 410 (1427)
Q Consensus 405 ~iv~~G 410 (1427)
+++++|
T Consensus 221 ~i~~~g 226 (226)
T cd03234 221 EIVYSG 226 (226)
T ss_pred EEEecC
Confidence 999876
No 225
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-35 Score=331.42 Aligned_cols=217 Identities=26% Similarity=0.304 Sum_probs=177.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478999987663 245899999999999999999999999999999999986532 3489999999
Q ss_pred ccCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKE-----QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ..+.++..+.++++++.+++.. ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 123456799999999999999999999886543210 1123334456788899998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+...+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 699999999975 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 223 ~-G~i~~~~~~ 232 (253)
T PRK14267 223 L-GKLIEVGPT 232 (253)
T ss_pred C-CEEEEeCCH
Confidence 6 688887764
No 226
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-35 Score=332.27 Aligned_cols=217 Identities=21% Similarity=0.250 Sum_probs=178.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 478999987652 2468999999999999999999999999999999999865 3579999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCC----------c--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000555 906 EQS---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLS----------K--EVSKNQRHEFVEEVMRLVELDSLRDA 969 (1427)
Q Consensus 906 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 969 (1427)
... . .+..++|++|++.+++.+||+||+.+....... . .....+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986432110 0 00112233567888999999877776
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhce
Q 000555 970 LVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1048 (1427)
Q Consensus 970 ~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~ 1048 (1427)
.+ ..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++.+.+|+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 65 479999999999999999999999999999999999999999999998775 899999999976 56788999
Q ss_pred EEEEecCcEEEEccCC
Q 000555 1049 LLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1049 v~~l~~gg~~~~~g~~ 1064 (1427)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999986 678888775
No 227
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=332.19 Aligned_cols=213 Identities=27% Similarity=0.419 Sum_probs=177.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 67889887653 2468999999999999999999999999999999999865 35799999998653
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
. ..+++.++|++|++.+++.+||+||+.+..... ....++..+.++++++.+++.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 224467899999988888899999998764321 1122233456788999999988777765 4799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 984 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 984 rqrl~ia~aL~------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|+|||+++|++. .+...+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 57899999999975 46678999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 77777764
No 228
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.8e-35 Score=324.97 Aligned_cols=198 Identities=28% Similarity=0.441 Sum_probs=165.6
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCCH
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lTV 245 (1427)
++|+|+|+++++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999875 99999999987532 235679999999988888999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.+.....+.. .. ....+++++++.+||++..+. .++
T Consensus 96 ~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~ 135 (218)
T cd03266 96 RENLEYFAGLYGLK-----------GD------------------------ELTARLEELADRLGMEELLDR-----RVG 135 (218)
T ss_pred HHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCHHHHhh-----hhh
Confidence 99998864432210 00 001235678899999754444 455
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.+++|++++|++|+
T Consensus 136 ~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~-~~~~~~~~d~i~~l~~G~ 213 (218)
T cd03266 136 GFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHI-MQEVERLCDRVVVLHRGR 213 (218)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999865 48899987554 567888999999999999
Q ss_pred EEEec
Q 000555 406 LVYQG 410 (1427)
Q Consensus 406 iv~~G 410 (1427)
+++.|
T Consensus 214 i~~~~ 218 (218)
T cd03266 214 VVYEG 218 (218)
T ss_pred EeecC
Confidence 98764
No 229
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.5e-35 Score=330.56 Aligned_cols=204 Identities=23% Similarity=0.333 Sum_probs=166.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC-----CCCCCceeEEEECCeecCcc-----cccceEEEEccC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKL-----DSSLKKSGNITYNGYKLDEF-----HVQRTSAYISQT 236 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 236 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|. +|+|.++|+++... ..++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999998 664 89999999987532 235679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 237 DNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 237 ~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
+.++ .+||+||+.++.+..+... .. ....+++++++.+||.+..+
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~~l~~~~l~~~~~ 134 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL----------KE------------------------ELDERVEEALRKAALWDEVK 134 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc----------HH------------------------HHHHHHHHHHHHcCCChHHh
Confidence 8777 7999999998754322100 00 00123567888999975443
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
.... +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++++ +|+|++.|+ .+++.++||
T Consensus 135 ~~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~sH~-~~~~~~~~d 208 (227)
T cd03260 135 DRLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVTHN-MQQAARVAD 208 (227)
T ss_pred ccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEecc-HHHHHHhCC
Confidence 3220 4679999999999999999999999999999999999999999999998653 788886554 567788999
Q ss_pred cEEEEeCCeEEEecChHH
Q 000555 397 DLLLLSEGHLVYQGPRAE 414 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~ 414 (1427)
++++|++|++++.|++++
T Consensus 209 ~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 209 RTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEEeCCEEEEecCccc
Confidence 999999999999998765
No 230
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-34 Score=340.20 Aligned_cols=214 Identities=21% Similarity=0.286 Sum_probs=175.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------cc-ceEEEEccCC--
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQ-RTSAYISQTD-- 237 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~-~~~~yv~Q~~-- 237 (1427)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|....+|+|.++|+++.... .+ +.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 56999999999999999999999999999999999999874224899999999885432 12 4799999997
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccc
Q 000555 238 NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSET 317 (1427)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t 317 (1427)
.+.+.+||.+++.+....... ..+.+ ...++.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~----------~~~~~------------------------~~~~~~~~L~~vgL~~~~~~ 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG----------MSKAE------------------------AFEESVRMLDAVKMPEARKR 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC----------CCHHH------------------------HHHHHHHHHHHcCCCChHHH
Confidence 578899999999876433210 00000 01235678889999753222
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
-++.+.+|||||||||+||+||+.+|+++++||||+|||..++.+|++.|+++.++.+.|+|++. |....+.+++|+
T Consensus 155 --~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iT-Hdl~~~~~~~Dr 231 (330)
T PRK09473 155 --MKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMIT-HDLGVVAGICDK 231 (330)
T ss_pred --hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEE-CCHHHHHHhCCE
Confidence 24567889999999999999999999999999999999999999999999999876788999864 556677889999
Q ss_pred EEEEeCCeEEEecChHHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~ 417 (1427)
|++|++|+|++.|+.+++.+
T Consensus 232 i~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 232 VLVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999998863
No 231
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=334.67 Aligned_cols=213 Identities=25% Similarity=0.367 Sum_probs=178.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ +++.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 57888887652 12358999999999999999999999999999999999865 35799999998764
Q ss_pred c----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 907 Q----STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
. ...++.+||++|++. .++..|+.||+.+..... ..+..+..+.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 234567999999975 466789999998765322 2344455567889999999988877765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999998877999999999976 34 66999999986 678888
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 875
No 232
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-35 Score=376.26 Aligned_cols=207 Identities=24% Similarity=0.373 Sum_probs=169.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++++||+.++|+||||||||||+++|+|++ |. +|+|.+||+++++. ..++.++||+|++.+|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 46999999999999999999999999999999999999 75 89999999998765 35788999999987665 5
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++.. .. . ++++++..+.+ ..++.++ .|++..||.+|+++
T Consensus 438 TI~eNI~~g~~--~~---~------------------~eei~~al~~a---------~l~~~i~--~lp~G~dT~vge~G 483 (588)
T PRK11174 438 TLRDNVLLGNP--DA---S------------------DEQLQQALENA---------WVSEFLP--LLPQGLDTPIGDQA 483 (588)
T ss_pred CHHHHhhcCCC--CC---C------------------HHHHHHHHHHh---------CHHHHHH--hcccccccccccCC
Confidence 99999998621 00 0 01111111111 0122222 35667899999986
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
. .||||||||++||||++++|+||+||||||+||+.++..|.+.|+++.+ ++|+|++.|++ +..+.||+|++|++
T Consensus 484 ~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~--~~TvIiItHrl--~~i~~aD~Iivl~~ 558 (588)
T PRK11174 484 A-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASR--RQTTLMVTHQL--EDLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhC--CCEEEEEecCh--HHHHhCCEEEEEeC
Confidence 5 5999999999999999999999999999999999999999999998753 78998877776 66788999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++++|+++++.+
T Consensus 559 G~i~e~G~~~eL~~ 572 (588)
T PRK11174 559 GQIVQQGDYAELSQ 572 (588)
T ss_pred CeEeecCCHHHHHh
Confidence 99999999999874
No 233
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=341.51 Aligned_cols=221 Identities=21% Similarity=0.351 Sum_probs=175.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------------------ccc
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------------------HVQ 227 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 227 (1427)
.++|+|+|++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|+++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999876 99999999887432 235
Q ss_pred ceEEEEccCCC-CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHH
Q 000555 228 RTSAYISQTDN-HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVL 306 (1427)
Q Consensus 228 ~~~~yv~Q~~~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 306 (1427)
+.++||+|++. .+...||+||+.|+....+.. .. +...++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-----------~~------------------------~~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-----------KS------------------------EAKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-----------HH------------------------HHHHHHHHHH
Confidence 67999999862 333469999999875322110 00 0012356788
Q ss_pred HHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecC
Q 000555 307 KVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQ 386 (1427)
Q Consensus 307 ~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q 386 (1427)
+.+||+.. ..++.+..|||||||||+|||+|+.+|+++||||||+|||+.++..+.+.|+++.+ .++|||++.|+
T Consensus 161 ~~~gL~~~----~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TiiivtHd 235 (320)
T PRK13631 161 NKMGLDDS----YLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVITHT 235 (320)
T ss_pred HHcCCChh----HhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecC
Confidence 99999621 12445567999999999999999999999999999999999999999999999865 48899987544
Q ss_pred CchhHHhhcCcEEEEeCCeEEEecChHHHHH---HHHhcCCCCCCCCC
Q 000555 387 PPPETFDLFDDLLLLSEGHLVYQGPRAEVLE---FFESLGFQLPPRKG 431 (1427)
Q Consensus 387 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~~~~ 431 (1427)
..++.++||+|++|++|++++.|+++++.. .++..|+..|....
T Consensus 236 -~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~ 282 (320)
T PRK13631 236 -MEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRVIQ 282 (320)
T ss_pred -HHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChHHH
Confidence 556788999999999999999999998752 34556666554333
No 234
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-35 Score=330.57 Aligned_cols=208 Identities=25% Similarity=0.400 Sum_probs=172.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999875 89999999987542 2346799999999899899
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.++.+..+.. .. .....++++++.+||+.. ...++.
T Consensus 91 tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~l~l~~~---~~~~~~ 132 (242)
T cd03295 91 TVEENIALVPKLLKWP-----------KE------------------------KIRERADELLALVGLDPA---EFADRY 132 (242)
T ss_pred cHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCCcH---HHHhcC
Confidence 9999999865432210 00 001135678889999740 023445
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.+++|+|++|++
T Consensus 133 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~-~~~~~~~~d~i~~l~~ 211 (242)
T cd03295 133 PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHD-IDEAFRLADRIAIMKN 211 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecC-HHHHHHhCCEEEEEEC
Confidence 567999999999999999999999999999999999999999999999876558899887655 4577889999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+.+++.
T Consensus 212 G~i~~~~~~~~~~ 224 (242)
T cd03295 212 GEIVQVGTPDEIL 224 (242)
T ss_pred CEEEEecCHHHHH
Confidence 9999999988764
No 235
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-35 Score=347.21 Aligned_cols=201 Identities=24% Similarity=0.308 Sum_probs=173.5
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc---c----ccceEEEEccCCCCC
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS---T----FARISGYVEQNDIHS 924 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~~~~~ 924 (1427)
..+|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.++... . .++.+|||+|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 458999999999999999999999999999999999865 3579999999876431 1 235799999999999
Q ss_pred CCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000555 925 PQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1427)
Q Consensus 925 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDE 1004 (1427)
+++||+||+.+....+ ..+.++..+.++++++.++|.+..+..+ ..||||||||++|||||+.+|++|||||
T Consensus 119 ~~~Tv~enl~~~~~~~---~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELA---GINAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 9999999999876543 2234455567889999999998877765 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1005 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 5899999999976 57788999999986 688887764
No 236
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-35 Score=349.31 Aligned_cols=209 Identities=23% Similarity=0.400 Sum_probs=174.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++||+++|+||||||||||||+|+|.++|. +|+|.++|+++... ..++.+|||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999886 99999999987653 3457899999999888899
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.++...... . .... ......+++++++.+||.+..+ +.
T Consensus 93 tv~e~v~~~~~~~~~---~---~~~~-------------------------~~~~~~~v~~~le~vgl~~~~~-----~~ 136 (402)
T PRK09536 93 DVRQVVEMGRTPHRS---R---FDTW-------------------------TETDRAAVERAMERTGVAQFAD-----RP 136 (402)
T ss_pred CHHHHHHhccchhcc---c---ccCC-------------------------CHHHHHHHHHHHHHcCCchhhc-----CC
Confidence 999999986321100 0 0000 0001234678899999976544 44
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
++.|||||||||.|||||+++|++|||||||+|||+.++.++.+.|+++++ .++|+|+++ |..+++.++||++++|++
T Consensus 137 ~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivs-Hdl~~~~~~adrii~l~~ 214 (402)
T PRK09536 137 VTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAI-HDLDLAARYCDELVLLAD 214 (402)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEE-CCHHHHHHhCCEEEEEEC
Confidence 567999999999999999999999999999999999999999999999975 488999875 556788899999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+++++.
T Consensus 215 G~iv~~G~~~ev~ 227 (402)
T PRK09536 215 GRVRAAGPPADVL 227 (402)
T ss_pred CEEEEecCHHHHh
Confidence 9999999999875
No 237
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.7e-35 Score=329.02 Aligned_cols=215 Identities=24% Similarity=0.340 Sum_probs=177.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 67888876552 2468999999999999999999999999999999999765 35799999998754
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCC--c---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 907 QS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLS--K---EVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.. ..++.++|++|++.+++.+||+||+.+....... . ....++..+.++++++.+++.+..+..+ +
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 31 1234699999999999999999999886432100 0 0112334456889999999988777665 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 789999999975 46678999999986 67
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 7777764
No 238
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.3e-35 Score=327.52 Aligned_cols=195 Identities=26% Similarity=0.411 Sum_probs=161.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999875 999999999875432 23579999999988
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.++....+.. ..+ ....++++++.+||++..+.
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-- 136 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP-----------KKE------------------------RRERAEELLERVGLGDRLNH-- 136 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC-----------HHH------------------------HHHHHHHHHHHcCCchhhhc--
Confidence 99999999999875433210 000 01235678899999754443
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|++ .++. .||+++
T Consensus 137 ---~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~-~~d~v~ 211 (218)
T cd03255 137 ---YPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDP-ELAE-YADRII 211 (218)
T ss_pred ---ChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCH-HHHh-hhcEEE
Confidence 44579999999999999999999999999999999999999999999998764588999976665 4554 999999
Q ss_pred EEeCCeE
Q 000555 400 LLSEGHL 406 (1427)
Q Consensus 400 lL~~G~i 406 (1427)
+|++|++
T Consensus 212 ~l~~G~i 218 (218)
T cd03255 212 ELRDGKI 218 (218)
T ss_pred EeeCCcC
Confidence 9999974
No 239
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=317.84 Aligned_cols=183 Identities=46% Similarity=0.791 Sum_probs=157.5
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~ 242 (1427)
..+.+|+|+|+++++||+++|+||||||||||+++|+|.++|..+.+|+|.++|+++... ..++.++|++|++.+++.
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~ 97 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPT 97 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhcceEEEEecccccCCC
Confidence 345799999999999999999999999999999999999983222499999999987643 245679999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++.+.. .+.
T Consensus 98 ~tv~~~l~~~~~~~---------------------------------------------------------------~~~ 114 (202)
T cd03233 98 LTVRETLDFALRCK---------------------------------------------------------------GNE 114 (202)
T ss_pred CcHHHHHhhhhhhc---------------------------------------------------------------ccc
Confidence 99999998753210 122
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++.+.|+|+++||+.+++.+.+|++++|+
T Consensus 115 ~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~ 194 (202)
T cd03233 115 FVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLY 194 (202)
T ss_pred chhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEE
Confidence 34569999999999999999999999999999999999999999999998765567877777888788999999999999
Q ss_pred CCeEEEec
Q 000555 403 EGHLVYQG 410 (1427)
Q Consensus 403 ~G~iv~~G 410 (1427)
+|++++.|
T Consensus 195 ~G~i~~~g 202 (202)
T cd03233 195 EGRQIYYG 202 (202)
T ss_pred CCEEEecC
Confidence 99998765
No 240
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.7e-35 Score=341.93 Aligned_cols=210 Identities=23% Similarity=0.285 Sum_probs=175.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCC--C
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTD--N 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~--~ 238 (1427)
.++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 57999999999999999999999999999999999999875 899999999886432 356799999997 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+++.+||.||+.+..+.... + +.+.+ ...+++++++.+||.. .
T Consensus 111 l~p~~tv~~~i~~~l~~~~~--~-------~~~~~------------------------~~~~~~~~l~~vgl~~----~ 153 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHP--K-------LSRQE------------------------VKDRVKAMMLKVGLLP----N 153 (331)
T ss_pred cCCCCCHHHHHHHHHHHhcc--C-------CCHHH------------------------HHHHHHHHHHHcCCCh----H
Confidence 78899999999986543210 0 00000 0123567899999942 1
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+.++.+..|||||||||+||+||+.+|+++++||||+|||..++.++++.|+++.++.+.|+|++ +|....+.+++|+|
T Consensus 154 ~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~i-THdl~~~~~~~dri 232 (331)
T PRK15079 154 LINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFI-AHDLAVVKHISDRV 232 (331)
T ss_pred HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEE
Confidence 34556678999999999999999999999999999999999999999999999977668899886 56667888899999
Q ss_pred EEEeCCeEEEecChHHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~ 417 (1427)
++|++|++++.|+.+++.+
T Consensus 233 ~vl~~G~ive~g~~~~i~~ 251 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVYH 251 (331)
T ss_pred EEEECCEEEEEcCHHHHHc
Confidence 9999999999999988753
No 241
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.41 Aligned_cols=214 Identities=26% Similarity=0.389 Sum_probs=179.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ +++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 67889987663 12358999999999999999999999999999999999865 35899999998754
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 Q---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
. ..+++.+||++|++. .+...||.||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999963 344689999998765321 2344445567889999999988777765 489999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 56788999999986 678888
Q ss_pred cCC
Q 000555 1062 GKL 1064 (1427)
Q Consensus 1062 g~~ 1064 (1427)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 875
No 242
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=334.18 Aligned_cols=213 Identities=25% Similarity=0.371 Sum_probs=176.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 57888887652 2458999999999999999999999999999999999765 35799999998753
Q ss_pred c-----ccccceEEEEccCCCC-CCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 Q-----STFARISGYVEQNDIH-SPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~-~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. ..+++.+||++|++.. +...|+.||+.+..... ....++..+.++++++.+++.+..++.+ ..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1345679999998753 34568999998764322 2233444556788999999988777765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998877899999999975 46678999999986 67888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 7764
No 243
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=330.65 Aligned_cols=217 Identities=24% Similarity=0.323 Sum_probs=177.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 478899988763 235899999999999999999999999999999999976421 2589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++.+||+||+.+....+. ..+.++..+.++++++.+++. +..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 146 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKPG-- 146 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCCc--
Confidence 87531 2345679999999999999999999988754321 112334455678899999884 2334333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 147 ---GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 57999999999999999999999999999999999999999999999864 689999999975 4678899999997
Q ss_pred c-----CcEEEEccCC
Q 000555 1054 R-----GGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~-----gg~~~~~g~~ 1064 (1427)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4788888874
No 244
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-35 Score=337.96 Aligned_cols=207 Identities=21% Similarity=0.308 Sum_probs=170.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCC-
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDN- 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~- 238 (1427)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.+|||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 46999999999999999999999999999999999999886 89999999987531 24568999999852
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-ccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSET 317 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 317 (1427)
.+...||.||+.|+....+.. .. + ....++++++.+||. ...
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~gL~~~~~-- 139 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN-----------LD----------E--------------VKNYAHRLLMDLGFSRDVM-- 139 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCCChhhh--
Confidence 333469999999875432210 00 0 011356788999995 333
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
+..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.++.|+|||++.| ..+++.++||+
T Consensus 140 ---~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH-~~~~~~~~~dr 215 (286)
T PRK13646 140 ---SQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSH-DMNEVARYADE 215 (286)
T ss_pred ---hCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEec-CHHHHHHhCCE
Confidence 34566799999999999999999999999999999999999999999999987666899999754 45678889999
Q ss_pred EEEEeCCeEEEecChHHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~ 417 (1427)
|++|++|++++.|+++++..
T Consensus 216 i~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999988753
No 245
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.9e-35 Score=322.73 Aligned_cols=192 Identities=27% Similarity=0.357 Sum_probs=160.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCC-CCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDN-HIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~-~~~~lTV 245 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999875 9999999998754344567999999864 3456799
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.++....+. ...+++++++.+||++..++ .+.
T Consensus 90 ~e~l~~~~~~~~~---------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~ 125 (205)
T cd03226 90 REELLLGLKELDA---------------------------------------GNEQAETVLKDLDLYALKER-----HPL 125 (205)
T ss_pred HHHHhhhhhhcCc---------------------------------------cHHHHHHHHHHcCCchhcCC-----Cch
Confidence 9999875422100 00135678899999765444 445
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|+ ..++.++||++++|++|+
T Consensus 126 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sH~-~~~~~~~~d~i~~l~~G~ 203 (205)
T cd03226 126 SLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVITHD-YEFLAKVCDRVLLLANGA 203 (205)
T ss_pred hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999999865 48899987554 566778999999999999
Q ss_pred EE
Q 000555 406 LV 407 (1427)
Q Consensus 406 iv 407 (1427)
++
T Consensus 204 iv 205 (205)
T cd03226 204 IV 205 (205)
T ss_pred EC
Confidence 75
No 246
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=334.37 Aligned_cols=215 Identities=27% Similarity=0.365 Sum_probs=180.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i 71 (279)
T PRK13635 5 IIRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVL 71 (279)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 3789999876631 124589999999999999999999999999999999998653 589999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ...++.+||++|++. .++..||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 143 (279)
T PRK13635 72 SEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSG 143 (279)
T ss_pred CcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCH
Confidence 43 234567999999973 677789999998865332 2234455567899999999998888776 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. .+ ..+|++++|.+ |++++
T Consensus 144 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~ 220 (279)
T PRK13635 144 GQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILE 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 899999999976 34 46999999986 67888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13635 221 EGTP 224 (279)
T ss_pred ECCH
Confidence 8875
No 247
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7e-35 Score=322.38 Aligned_cols=195 Identities=27% Similarity=0.423 Sum_probs=164.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-cccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-HVQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999875 99999999876432 234679999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.+.....+. .+.+++++++.+||++..++ .+.
T Consensus 90 ~e~l~~~~~~~~~---------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~ 125 (208)
T cd03268 90 RENLRLLARLLGI---------------------------------------RKKRIDEVLDVVGLKDSAKK-----KVK 125 (208)
T ss_pred HHHHHHHHHhcCC---------------------------------------cHHHHHHHHHHcCCHHHHhh-----hHh
Confidence 9999886432110 01135667888899764444 345
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.| ...++.+++|++++|++|+
T Consensus 126 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH-~~~~~~~~~d~v~~l~~g~ 203 (208)
T cd03268 126 GFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSH-LLSEIQKVADRIGIINKGK 203 (208)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcC-CHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999876 5889988754 4567778999999999999
Q ss_pred EEEec
Q 000555 406 LVYQG 410 (1427)
Q Consensus 406 iv~~G 410 (1427)
+++.|
T Consensus 204 i~~~g 208 (208)
T cd03268 204 LIEEG 208 (208)
T ss_pred EEecC
Confidence 98765
No 248
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.1e-34 Score=327.16 Aligned_cols=206 Identities=28% Similarity=0.389 Sum_probs=169.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc--ccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH--VQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~~~~~~~lT 244 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... ..+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999875 999999998875422 2357999999988888999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+.....+.. ..+ ....++++++.+||+...++. +
T Consensus 91 ~~~~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~-----~ 130 (236)
T TIGR03864 91 VRQNLRYHAALHGLS-----------RAE------------------------ARERIAALLARLGLAERADDK-----V 130 (236)
T ss_pred HHHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCChhhhcCC-----h
Confidence 999998764432110 000 011256688889997654443 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|++++++.++|+|++.|++ +++. .+|++++|++|
T Consensus 131 ~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~-~~d~i~~l~~G 208 (236)
T TIGR03864 131 RELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLV-DEIE-ADDRLVVLHRG 208 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCh-hhHh-hCCEEEEEeCC
Confidence 569999999999999999999999999999999999999999999998765588999876654 4554 59999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++++.|+.+++..
T Consensus 209 ~i~~~~~~~~~~~ 221 (236)
T TIGR03864 209 RVLADGAAAELRG 221 (236)
T ss_pred eEEEeCCHHHHHH
Confidence 9999999887754
No 249
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.7e-35 Score=333.88 Aligned_cols=207 Identities=21% Similarity=0.350 Sum_probs=171.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999999875 899999998875321 245799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||.||+.++...... ....+ ....++.+++.+||++..+.
T Consensus 97 ~~~tv~enl~~~~~~~~~----------~~~~~------------------------~~~~~~~~l~~~gl~~~~~~--- 139 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ----------LPAPL------------------------LHSTVMMKLEAVGLRGAAKL--- 139 (269)
T ss_pred CCCCHHHHHHHHHHHccC----------CCHHH------------------------HHHHHHHHHHHcCChhhhhC---
Confidence 899999999886432110 00000 01125667889999765544
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.++.|+|+|++. |...++.++||++++
T Consensus 140 --~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivs-H~~~~~~~~~d~v~~ 216 (269)
T PRK11831 140 --MPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVS-HDVPEVLSIADHAYI 216 (269)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhhCEEEE
Confidence 34569999999999999999999999999999999999999999999998765588998875 455678899999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+++++.
T Consensus 217 l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 217 VADKKIVAHGSAQALQ 232 (269)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 250
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=317.80 Aligned_cols=196 Identities=33% Similarity=0.607 Sum_probs=162.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCcc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 904 (1427)
.++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57999999988642 13457999999999999999999999999999999999976522 468999999987
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 905 KEQ--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 905 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
... ...++.++|++|++.+++.+||+||+.+..... .+..+ ..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~~-----~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEFV-----RGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccch-----hhCCHH
Confidence 643 235667999999999999999999998754211 22222 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ ++|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 678777776654467788999999986 577665
Q ss_pred c
Q 000555 1062 G 1062 (1427)
Q Consensus 1062 g 1062 (1427)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 251
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-35 Score=375.47 Aligned_cols=220 Identities=25% Similarity=0.408 Sum_probs=182.0
Q ss_pred hhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEE
Q 000555 155 TGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSA 231 (1427)
Q Consensus 155 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~ 231 (1427)
.++.+.+|.+++.+||+|+|+++++|+.+||+|||||||||.+.+|-..++|+ +|+|.++|+++++.+ +|+++|
T Consensus 991 ~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~ 1067 (1228)
T KOG0055|consen 991 RNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIG 1067 (1228)
T ss_pred eeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcc
Confidence 34556678888999999999999999999999999999999999999999986 999999999998765 578999
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCC
Q 000555 232 YISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGL 311 (1427)
Q Consensus 232 yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL 311 (1427)
.|+|+|.+|. .|+||||.||.+ ... ..+ +.+..|.+. ..+. ..+|
T Consensus 1068 lVsQEP~LF~-~TIrENI~YG~~--~vs------~~e---------------Ii~Aak~AN--------aH~F---I~sL 1112 (1228)
T KOG0055|consen 1068 LVSQEPVLFN-GTIRENIAYGSE--EVS------EEE---------------IIEAAKLAN--------AHNF---ISSL 1112 (1228)
T ss_pred eeccCchhhc-ccHHHHHhccCC--CCC------HHH---------------HHHHHHHhh--------hHHH---HhcC
Confidence 9999998775 599999999821 110 011 111111110 0111 2369
Q ss_pred ccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhH
Q 000555 312 DLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPET 391 (1427)
Q Consensus 312 ~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~ 391 (1427)
++.+||.||+++. +||||||||++||||+++||+||||||.||+||+++.+.+.+.|++... |+|.|+.-|. ..+
T Consensus 1113 P~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~--gRT~IvIAHR--LST 1187 (1228)
T KOG0055|consen 1113 PQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAME--GRTTIVIAHR--LST 1187 (1228)
T ss_pred cCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhc--CCcEEEEecc--hhh
Confidence 9999999999987 5999999999999999999999999999999999999999999999753 6666554454 578
Q ss_pred HhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 392 FDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 392 ~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
.+.||.|+|+++|+|+++|++++++.
T Consensus 1188 IqnaD~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1188 IQNADVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred hhcCCEEEEEECCEEEecccHHHHHh
Confidence 89999999999999999999999985
No 252
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-35 Score=331.55 Aligned_cols=216 Identities=25% Similarity=0.373 Sum_probs=178.4
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 67888887652 2468999999999999999999999999999999999765 35799999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
. ..+++.++|++|+..+++.+|+.||+.++...... .....+...+.++++++.+++.+..++.+ ..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 23455699999999888889999999875311000 01111233456788999999988777765 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777899999999986 57788999999986 6777877
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 221 ~~ 222 (255)
T PRK11231 221 TP 222 (255)
T ss_pred CH
Confidence 65
No 253
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.6e-33 Score=365.22 Aligned_cols=209 Identities=29% Similarity=0.357 Sum_probs=176.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|+++. .++++|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 36999999998742 23568999999999999999999999999999999999876 358999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
.++ ..+++.+|||+|++.+++ .|++||+.++.. .++ +.+.++++..++.+ -.||.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~------~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP------LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC------CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 654 457889999999998886 599999987521 233 23566777776654 346777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999886 589999999975 5678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 688888875
No 254
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=8.3e-35 Score=329.88 Aligned_cols=213 Identities=23% Similarity=0.338 Sum_probs=170.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~~~ 240 (1427)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999875 89999999887532 1356799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++...... ....... ..+ .....+++++++.+||....+
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~~~~~~----------~~~---------------~~~~~~~~~~l~~~~l~~~~~---- 140 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TWRSLLG----------RFS---------------EEDKERALSALERVGLADKAY---- 140 (243)
T ss_pred ccccHHHHHhhccccccc--chhhhhc----------ccc---------------HHHHHHHHHHHHHcCcHhhhc----
Confidence 999999999875321000 0000000 000 001123567889999975443
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+.+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.++.++|+|++.|+ ..++.++||++++
T Consensus 141 -~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~-~~~~~~~~d~v~~ 218 (243)
T TIGR02315 141 -QRADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQ-VDLAKKYADRIVG 218 (243)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeEEE
Confidence 34567999999999999999999999999999999999999999999999876568899887554 5677889999999
Q ss_pred EeCCeEEEecChHHH
Q 000555 401 LSEGHLVYQGPRAEV 415 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~ 415 (1427)
|++|++++.|+++++
T Consensus 219 l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 219 LKAGEIVFDGAPSEL 233 (243)
T ss_pred EECCEEEecCCHHHh
Confidence 999999999998875
No 255
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=315.68 Aligned_cols=190 Identities=61% Similarity=0.969 Sum_probs=161.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++.+ ..++++|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 47899998876421 012468999999999999999999999999999999999643223589999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
. ..+++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345667999999999999999999998653110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887789999999998644677899999998647888765
No 256
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=334.04 Aligned_cols=218 Identities=26% Similarity=0.367 Sum_probs=176.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++... ...+++|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 71 (280)
T PRK13649 2 GINLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLI 71 (280)
T ss_pred eEEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEc
Confidence 368899988763110 011458999999999999999999999999999999999865 3589999999875
Q ss_pred Cc-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000555 906 EQ-------STFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPG 975 (1427)
Q Consensus 906 ~~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 975 (1427)
.. ..+++.++|++|++ .+++ .||+||+.+..... ..+.++..+.++++++.++|. ...+..+
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---- 143 (280)
T PRK13649 72 TSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP---- 143 (280)
T ss_pred cccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc----
Confidence 42 22456799999986 3444 69999998764322 123344455678899999997 3455554
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+.+.+|++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~- 220 (280)
T PRK13649 144 -FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK- 220 (280)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998777899999999975 46678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 221 G~i~~~g~~ 229 (280)
T PRK13649 221 GKLVLSGKP 229 (280)
T ss_pred CEEEEeCCH
Confidence 677777764
No 257
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=334.33 Aligned_cols=216 Identities=26% Similarity=0.378 Sum_probs=175.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35999999999999999999999999999999999999886 99999999988643 23567999999873 6777
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.||+||+.++.+..+.. .. + ...+++++++.+||++..++
T Consensus 97 ~tv~enl~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~----- 136 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP-----------RE----------E--------------MVERVDQALRQVGMEDFLNR----- 136 (279)
T ss_pred ccHHHHHhhhHhhCCCC-----------HH----------H--------------HHHHHHHHHHHcCChhhhhC-----
Confidence 89999999865432210 00 0 01236778899999765444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.++.++|||++.|++ .++. .||++++|+
T Consensus 137 ~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~-~~~~-~~d~i~~l~ 214 (279)
T PRK13635 137 EPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDL-DEAA-QADRVIVMN 214 (279)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCH-HHHH-cCCEEEEEE
Confidence 34579999999999999999999999999999999999999999999999776689999976664 4554 699999999
Q ss_pred CCeEEEecChHHHHH---HHHhcCCCCC
Q 000555 403 EGHLVYQGPRAEVLE---FFESLGFQLP 427 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~---~f~~~G~~~p 427 (1427)
+|++++.|+.+++.. .+...++.+|
T Consensus 215 ~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 215 KGEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CCEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 999999999988753 3444455443
No 258
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=332.09 Aligned_cols=217 Identities=29% Similarity=0.392 Sum_probs=178.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478999987652 2468999999999999999999999999999999999765 3579999999865
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.++|++|+..+++.+|+.||+.+....... .........+.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888999999999875321100 00111223456789999999987777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999976 57788999999986 67777
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 7764
No 259
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-34 Score=330.82 Aligned_cols=223 Identities=23% Similarity=0.329 Sum_probs=178.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++.....+ ..+++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67899987764210000 0113569999999999999999999999999999999999865 35799999998764
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 QS------TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
.. .+++.++|++|++ .+.+.+||+|++.+..... ......+..+.++++++.+++. ...+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 31 1356799999996 4667899999997654311 1122334456688999999996 5666654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999975 46678999999985 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 88888875
No 260
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.6e-34 Score=322.54 Aligned_cols=212 Identities=26% Similarity=0.385 Sum_probs=174.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++.. .....+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 47899998765310 011358999999999999999999999999999999999865 3579999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000555 906 EQST------F-ARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSG 978 (1427)
Q Consensus 906 ~~~~------~-~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 978 (1427)
.... . ++.++|++|++.+++.+|++||+.+....+ ..+..+..+.++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 256999999999999999999998765432 1233444567889999999987777665 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999976 34 56999999986 56
Q ss_pred EE
Q 000555 1058 VI 1059 (1427)
Q Consensus 1058 ~~ 1059 (1427)
++
T Consensus 224 i~ 225 (228)
T PRK10584 224 LQ 225 (228)
T ss_pred EE
Confidence 54
No 261
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.37 Aligned_cols=217 Identities=23% Similarity=0.313 Sum_probs=179.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.+.++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 588999988763 2468999999999999999999999999999999999865 3579999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.++|++|++.+++..|++|++.+......+ .....+...+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 33 23345799999999999999999999865211100 00011233456789999999987777765 58999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57888999999986 67888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 225 ~g~~ 228 (265)
T PRK10253 225 QGAP 228 (265)
T ss_pred eCCH
Confidence 8875
No 262
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=372.85 Aligned_cols=207 Identities=25% Similarity=0.315 Sum_probs=173.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCC--C
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTD--N 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~--~ 238 (1427)
.++|+||||+|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 46999999999999999999999999999999999999875 899999999875421 346799999986 4
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-ccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSET 317 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t 317 (1427)
+++.+||.|++.+.....+.. .+.+ ...+++++|+.+||+ ...
T Consensus 414 l~~~~tv~~~l~~~~~~~~~~----------~~~~------------------------~~~~~~~~L~~~gL~~~~~-- 457 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHGLL----------PGKA------------------------AAARVAWLLERVGLLPEHA-- 457 (623)
T ss_pred cCCCCCHHHHHHHHHHHcCCC----------CHHH------------------------HHHHHHHHHHHcCCCHHHh--
Confidence 888999999998865432210 0000 012366789999995 323
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
++.+..|||||||||+|||||+.+|++|||||||+|||..++.++.+.|+++.++.|.|+|++ +|....+.++||+
T Consensus 458 ---~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~i-sHdl~~v~~~~dr 533 (623)
T PRK10261 458 ---WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFI-SHDMAVVERISHR 533 (623)
T ss_pred ---hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCE
Confidence 445667999999999999999999999999999999999999999999999987668899986 5566788899999
Q ss_pred EEEEeCCeEEEecChHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~ 416 (1427)
|++|++|++++.|+++++.
T Consensus 534 i~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 534 VAVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred EEEEECCEEEEecCHHHHh
Confidence 9999999999999999875
No 263
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=338.40 Aligned_cols=214 Identities=21% Similarity=0.242 Sum_probs=173.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEECCeecCccc---c----cceEEEEccCC-
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSL-KKSGNITYNGYKLDEFH---V----QRTSAYISQTD- 237 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~---~----~~~~~yv~Q~~- 237 (1427)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++.... . ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987421 24899999999875432 1 24699999987
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 238 -NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 238 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
.+.+.+||.+++....+.... ..+. +...+++++|+.+||++..
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~----------~~~~------------------------~~~~~~~~~L~~~gL~~~~- 144 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG----------GNKK------------------------TRRQRAIDLLNQVGIPDPA- 144 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC----------CCHH------------------------HHHHHHHHHHHHCCCCChH-
Confidence 478899999998765432210 0000 0112367789999996421
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
..-++.+..|||||||||+||+||+.+|++|++||||+|||+.++.++++.|+++.++.|.|+|+++ |....+.+++|
T Consensus 145 -~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iT-Hdl~~~~~~ad 222 (326)
T PRK11022 145 -SRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLIT-HDLALVAEAAH 222 (326)
T ss_pred -HHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCC
Confidence 1234567789999999999999999999999999999999999999999999999876789999864 55667788999
Q ss_pred cEEEEeCCeEEEecChHHHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~~ 417 (1427)
+|++|++|++++.|+.+++.+
T Consensus 223 ri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 223 KIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEEECCEEEEECCHHHHhh
Confidence 999999999999999998853
No 264
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-34 Score=323.61 Aligned_cols=213 Identities=29% Similarity=0.406 Sum_probs=179.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
+.++|++++++ .+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~ 65 (232)
T cd03300 1 IELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDIT 65 (232)
T ss_pred CEEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 35788877653 24689999999999999999999999999999999998653 4799999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 907 QS-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 907 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
.. ..++.++|++|++..++.+|++||+.+....+ ........+.++++++.+++.+..++.+ ..||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~q 137 (232)
T cd03300 66 NLPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLK---KLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQ 137 (232)
T ss_pred cCChhhcceEEEecccccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHH
Confidence 32 23467999999999998999999998765433 1223334556788999999988877765 589999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++.+.|+.
T Consensus 138 rl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 138 RVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999998764 899999999975 46788999999986 677777753
No 265
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=329.50 Aligned_cols=217 Identities=25% Similarity=0.316 Sum_probs=176.5
Q ss_pred CceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEE
Q 000555 824 PLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKI 900 (1427)
Q Consensus 824 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i 900 (1427)
+..++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.+
T Consensus 11 ~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~ 77 (260)
T PRK10744 11 PSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILL 77 (260)
T ss_pred CceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEE
Confidence 34689999988663 2358999999999999999999999999999999999753 1 135799999
Q ss_pred CCccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccc
Q 000555 901 SGYPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALV 971 (1427)
Q Consensus 901 ~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 971 (1427)
+|.+... ..+++.++|++|+..+++ .|++||+.+...... ..+.++..++++++++.+++.+ ..+..+
T Consensus 78 ~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 154 (260)
T PRK10744 78 DGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQSG 154 (260)
T ss_pred CCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcCC
Confidence 9987532 234567999999988887 899999987653221 2233444566889999999843 233333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEE
Q 000555 972 GFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1051 (1427)
Q Consensus 972 g~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1051 (1427)
..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. .+.+.+|++++
T Consensus 155 -----~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~ 227 (260)
T PRK10744 155 -----YSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAF 227 (260)
T ss_pred -----CCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEE
Confidence 5799999999999999999999999999999999999999999999986 4789999999975 46678999999
Q ss_pred EecCcEEEEccCC
Q 000555 1052 MKRGGRVIYGGKL 1064 (1427)
Q Consensus 1052 l~~gg~~~~~g~~ 1064 (1427)
|++ |+++..|+.
T Consensus 228 l~~-G~i~~~g~~ 239 (260)
T PRK10744 228 MYL-GELIEFGNT 239 (260)
T ss_pred EEC-CEEEEeCCH
Confidence 986 678777764
No 266
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.62 Aligned_cols=220 Identities=26% Similarity=0.354 Sum_probs=179.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCcc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 904 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 478899987652 346899999999999999999999999999999999976532 236999999987
Q ss_pred CCc--------ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCc-----CCCHHHHHHHHHHHHHHcCCcccccccc
Q 000555 905 KEQ--------STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSK-----EVSKNQRHEFVEEVMRLVELDSLRDALV 971 (1427)
Q Consensus 905 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-----~~~~~~~~~~v~~~l~~l~L~~~~~~~v 971 (1427)
... ...++.++|++|++.+++.+||+||+.+......+. ....++..+.++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 123456899999999999999999998753211000 0112334457889999999987777765
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEE
Q 000555 972 GFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELL 1050 (1427)
Q Consensus 972 g~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~ 1050 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ .|+|||+++|++. .+...+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 47999999999999999999999999999999999999999999999976 4899999999976 4678899999
Q ss_pred EEecCcEEEEccCCC
Q 000555 1051 LMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1051 ~l~~gg~~~~~g~~~ 1065 (1427)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9986 6778887753
No 267
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=7.3e-33 Score=368.72 Aligned_cols=135 Identities=23% Similarity=0.298 Sum_probs=107.7
Q ss_pred CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000555 923 HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSGLSTEQRKRLTIAVELV---ANPS 998 (1427)
Q Consensus 923 ~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~---~~p~ 998 (1427)
.+...||.|+|.++..-........++..+.+ ++++.+||.+. .+..+ ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999887542211111233444555 47888999875 56654 479999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe-----cCcEEEEccCCC
Q 000555 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGRVIYGGKLG 1065 (1427)
Q Consensus 999 illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~g~~~ 1065 (1427)
+++|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|++++|. +||+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999975 348899999995 357888888763
No 268
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.70 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=169.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999875 89999999987542 24567999999964 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++....+.. .. +....++++++.+||++..++
T Consensus 99 ~tv~enl~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~----- 138 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP-----------PK------------------------KMKDIIDDLAKKVGMEDYLDK----- 138 (271)
T ss_pred ccHHHHHHhHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCHHHhhC-----
Confidence 89999998864322110 00 001135678899999765444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.||||||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|++. ++ ..||++++|+
T Consensus 139 ~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~ 216 (271)
T PRK13632 139 EPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFS 216 (271)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEE
Confidence 445799999999999999999999999999999999999999999999987654589998876653 44 4799999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++..|+.+++.
T Consensus 217 ~G~i~~~g~~~~~~ 230 (271)
T PRK13632 217 EGKLIAQGKPKEIL 230 (271)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988765
No 269
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=327.84 Aligned_cols=219 Identities=26% Similarity=0.336 Sum_probs=174.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC---CceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT---GGYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~---~~~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... ..+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 589999988663 2358999999999999999999999999999999999642 113579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+....... ..+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLH-ESAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 134567999999988887 599999988754321 11223334567888999998542111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999854 799999999975 46678999999986 67
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 7777764
No 270
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=331.45 Aligned_cols=215 Identities=26% Similarity=0.378 Sum_probs=179.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 5789999876521 23468999999999999999999999999999999999865 3579999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+||++|++. .++.+||+||+.+..... ..+.++..+.++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 235677999999974 677899999998864321 1233444567889999999988777765 58999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++. + ..+|++++|++ |++..
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5899999999863 4 47999999986 67777
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 7764
No 271
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=334.04 Aligned_cols=207 Identities=28% Similarity=0.373 Sum_probs=171.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc-----ccccceEEEEccCCC-CC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE-----FHVQRTSAYISQTDN-HI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~-----~~~~~~~~yv~Q~~~-~~ 240 (1427)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ...++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999875 9999999998741 124567999999863 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
...||+||+.++....+.. ..+ ....++++++.+||....
T Consensus 96 ~~~tv~e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gL~~~~----- 135 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP-----------EDE------------------------VRKRVDNALKRTGIEHLK----- 135 (283)
T ss_pred ccccHHHHHHhHHHHcCCC-----------HHH------------------------HHHHHHHHHHHCCChhhh-----
Confidence 5679999999865432210 000 012367788999997544
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
++.++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++++++.|+|||++. |..+++.++||++++
T Consensus 136 ~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvs-H~~~~~~~~~dri~~ 214 (283)
T PRK13636 136 DKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIAT-HDIDIVPLYCDNVFV 214 (283)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEe-cCHHHHHHhCCEEEE
Confidence 4456679999999999999999999999999999999999999999999999776688999875 555677789999999
Q ss_pred EeCCeEEEecChHHHHH
Q 000555 401 LSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~~ 417 (1427)
|++|++++.|+.+++..
T Consensus 215 l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 215 MKEGRVILQGNPKEVFA 231 (283)
T ss_pred EECCEEEEeCCHHHHhc
Confidence 99999999999988763
No 272
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=331.19 Aligned_cols=214 Identities=28% Similarity=0.374 Sum_probs=177.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. .++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 57889887652 12358999999999999999999999999999999999765 35799999998763
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 Q-----STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
. ...++.++|++|++. .+...||.||+.+..... ....++..+.+.++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 124567999999963 334579999998764221 2234445567889999999988888775 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. .+.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999975 46678999999986 67888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 8875
No 273
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-34 Score=324.66 Aligned_cols=211 Identities=27% Similarity=0.365 Sum_probs=172.7
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++++|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (230)
T TIGR03410 1 LEVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDIT 65 (230)
T ss_pred CEEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 35778876552 2468999999999999999999999999999999999865 35799999998754
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCH
Q 000555 907 QS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVE-LDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..++.++|++|++.+++.+|++||+.+....+. .. ..+.++++++.++ +.+..+..+ ..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~ 134 (230)
T TIGR03410 66 KLPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSG 134 (230)
T ss_pred CCCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCH
Confidence 31 124569999999999999999999988654321 11 1233567777776 555556654 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |+++.
T Consensus 135 G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~ 212 (230)
T TIGR03410 135 GQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVA 212 (230)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999975 46667999999986 67888
Q ss_pred ccCCC
Q 000555 1061 GGKLG 1065 (1427)
Q Consensus 1061 ~g~~~ 1065 (1427)
.|+..
T Consensus 213 ~~~~~ 217 (230)
T TIGR03410 213 SGAGD 217 (230)
T ss_pred ECCHH
Confidence 88753
No 274
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-34 Score=329.35 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=169.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-----------cccceEEEEcc
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-----------HVQRTSAYISQ 235 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q 235 (1427)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q 92 (250)
T PRK11264 16 QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQ 92 (250)
T ss_pred eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEec
Confidence 35999999999999999999999999999999999999875 89999999887531 23467999999
Q ss_pred CCCCCCCCCHHHHHHHHHHh-cCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccc
Q 000555 236 TDNHIPELTVRETFDFAARW-QGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLC 314 (1427)
Q Consensus 236 ~~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 314 (1427)
++.+++.+||+||+.++... ++.. .. .....++.+++.+||+..
T Consensus 93 ~~~~~~~~tv~e~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gl~~~ 137 (250)
T PRK11264 93 NFNLFPHRTVLENIIEGPVIVKGEP-----------KE------------------------EATARARELLAKVGLAGK 137 (250)
T ss_pred CcccCCCCCHHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCCcch
Confidence 98888889999999886421 1100 00 001235678888999754
Q ss_pred cccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhh
Q 000555 315 SETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDL 394 (1427)
Q Consensus 315 ~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~ 394 (1427)
.+ ..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |...++.++
T Consensus 138 ~~-----~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~t-H~~~~~~~~ 210 (250)
T PRK11264 138 ET-----SYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKRTMVIVT-HEMSFARDV 210 (250)
T ss_pred hh-----CChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHHHHHh
Confidence 43 34567999999999999999999999999999999999999999999999865 488988865 455678889
Q ss_pred cCcEEEEeCCeEEEecChHHHH
Q 000555 395 FDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 395 ~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
||++++|++|++++.|+.+++.
T Consensus 211 ~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 211 ADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred cCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999988764
No 275
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.4e-34 Score=324.49 Aligned_cols=198 Identities=26% Similarity=0.369 Sum_probs=166.4
Q ss_pred ccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHH
Q 000555 855 LSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLW 934 (1427)
Q Consensus 855 L~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~ 934 (1427)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||+||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999865 35799999998764322 12489999999999999999998
Q ss_pred HHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000555 935 FSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1014 (1427)
Q Consensus 935 ~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~ 1014 (1427)
+...... ......+..+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7632111 12333444566889999999988777765 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1015 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1015 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57788999999986 677777654
No 276
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=5.9e-35 Score=366.59 Aligned_cols=282 Identities=18% Similarity=0.263 Sum_probs=207.7
Q ss_pred CCCcceeeecccccch-hhhHHHHHHhhhcCccCHHHHHHHHHHHHhhcCC----CCCccEEEEeeeEEEEEEecCCCcC
Q 000555 65 GGEAKTETIDVRKLNR-SRRELVVSKALATNDQDNYKLLSAIKERLDRVGI----EVPKVEVRFQNLKVVADVQTGSRAL 139 (1427)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~v~~~~l~~~~~~~~~~~~~ 139 (1427)
|.++.+++||.+.+.. +||..+|+++.....+++++++.+....+.+..- +.+..-++++|+++.
T Consensus 219 g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---------- 288 (520)
T TIGR03269 219 GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFMEGVSEVEKECEVEVGEPIIKVRNVSKR---------- 288 (520)
T ss_pred CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHhhchhhccccccCCCCceEEEeccEEE----------
Confidence 5567778899998865 8999999998877777888776653222211110 000111222332221
Q ss_pred CchhHHhHHHHHHHhhhccccCC--ccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEC
Q 000555 140 PTLVNATRDVFERILTGLRIFKP--KRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYN 217 (1427)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~ 217 (1427)
+. +...+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++
T Consensus 289 ---------------------~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~ 344 (520)
T TIGR03269 289 ---------------------YISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPT---SGEVNVR 344 (520)
T ss_pred ---------------------eccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEEe
Confidence 11 112246999999999999999999999999999999999999875 8999996
Q ss_pred -Cee---cCcc------cccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHH
Q 000555 218 -GYK---LDEF------HVQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAF 287 (1427)
Q Consensus 218 -G~~---~~~~------~~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 287 (1427)
|.+ +... ..++.++|++|++.+++.+||+||+.+...+ ... ..+
T Consensus 345 ~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~-----------~~~-------------- 398 (520)
T TIGR03269 345 VGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL-ELP-----------DEL-------------- 398 (520)
T ss_pred cCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc-CCC-----------HHH--------------
Confidence 532 2211 1245699999998888999999999875322 100 000
Q ss_pred HhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHH
Q 000555 288 MKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVK 367 (1427)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~ 367 (1427)
.+.+++.+++.+||+.......-++.+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+
T Consensus 399 ----------~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~ 468 (520)
T TIGR03269 399 ----------ARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTH 468 (520)
T ss_pred ----------HHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 0113567889999964100001244566799999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 368 CLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 368 ~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
.|++++++.++|||++. |...++.++||++++|++|+++..|+++++.+
T Consensus 469 ~l~~l~~~~g~tvi~vs-Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 469 SILKAREEMEQTFIIVS-HDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHcCcEEEEEe-CCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99998776688998864 55678889999999999999999999888754
No 277
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-34 Score=326.75 Aligned_cols=219 Identities=22% Similarity=0.297 Sum_probs=174.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCC---CCceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRK---TGGYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 478899987652 245899999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+...+.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 234567999999988887 699999988654321 11222344567889999998642211111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4799999999986 46788999999986 68
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 8888864
No 278
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.6e-34 Score=329.63 Aligned_cols=216 Identities=28% Similarity=0.392 Sum_probs=177.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 57788887652 2468999999999999999999999999999999999765 35799999998754
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHh-ccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSAN-LRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~-l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
. ...++.++|++|++.+++.+||+||+.+... .+........+..+.+.++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 2334568999999877888999999987521 100000111233456888999999987777765 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999986 5777877
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 65
No 279
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.4e-34 Score=327.18 Aligned_cols=205 Identities=20% Similarity=0.363 Sum_probs=170.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-----cccceEEEEccCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~~ 241 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999875 99999999987542 23567999999988888
Q ss_pred CCCHHHHHHHHHHh-cCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 242 ELTVRETFDFAARW-QGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
.+||+||+.++... .+. ... .....++++++.+||+...+
T Consensus 91 ~~tv~~~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~~l~~~gl~~~~~---- 131 (240)
T PRK09493 91 HLTALENVMFGPLRVRGA-----------SKE------------------------EAEKQARELLAKVGLAERAH---- 131 (240)
T ss_pred CCcHHHHHHhHHHHhcCC-----------CHH------------------------HHHHHHHHHHHHcCChHHHh----
Confidence 99999999886421 111 000 00113567888999975433
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+.++.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ .+++.++||++++
T Consensus 132 -~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~ 208 (240)
T PRK09493 132 -HYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVTHE-IGFAEKVASRLIF 208 (240)
T ss_pred -cChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEE
Confidence 34567999999999999999999999999999999999999999999999865 48899887555 5677889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+.+++.
T Consensus 209 l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 209 IDKGRIAEDGDPQVLI 224 (240)
T ss_pred EECCEEEeeCCHHHHh
Confidence 9999999999988764
No 280
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.8e-34 Score=323.73 Aligned_cols=212 Identities=29% Similarity=0.436 Sum_probs=178.3
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5778876552 2469999999999999999999999999999999999865 357999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 908 S-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 908 ~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
. ..++.++|++|++.+++..|+.||+.+....+ ..+.....+.++++++.+++.+..++.. ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIR---KHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 23467999999999999999999998765432 1223334456789999999987777765 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
++||++|+++|++++|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999975 46788999999986 677887774
No 281
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=294.61 Aligned_cols=200 Identities=30% Similarity=0.422 Sum_probs=176.8
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHH
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEE 931 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 931 (1427)
..+|+|+|++|.+||.++++||||||||||||+++|..++ ..|+|.+||.+++...- .-|.|+|++.++|.+||.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 4589999999999999999999999999999999998773 58999999998764322 2488999999999999999
Q ss_pred HHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000555 932 SLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1011 (1427)
Q Consensus 932 ~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~ 1011 (1427)
|+.|+..++ .+++.++.+.+.+.+..+||.+..+..+ -.||||||||+.|||||+.+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999999887 5788899999999999999999887766 58999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEec-CcEEEEccCC
Q 000555 1012 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR-GGRVIYGGKL 1064 (1427)
Q Consensus 1012 ~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-gg~~~~~g~~ 1064 (1427)
-+++.++++|-++.+ +|+.++++||+.. +..-.+++++||+. -|+++..=|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 999999999988764 6999999999976 44446799999984 2567766555
No 282
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=335.72 Aligned_cols=221 Identities=19% Similarity=0.271 Sum_probs=179.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC-c-eeEEEEEECCc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-G-YIEGDIKISGY 903 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~ 903 (1427)
.++++|+++.+..+ .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + ..+|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~ 73 (326)
T PRK11022 3 LLNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQ 73 (326)
T ss_pred eEEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCE
Confidence 36899998776421 1124699999999999999999999999999999999997542 2 35799999998
Q ss_pred cCCcc---c----ccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc---ccccc
Q 000555 904 PKEQS---T----FARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL---RDALV 971 (1427)
Q Consensus 904 ~~~~~---~----~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~v 971 (1427)
++... . .++.++||+|++ .+.|.+|+.+++....... .....++..+.+.++++.++|.+. .+..
T Consensus 74 ~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~--~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~- 150 (326)
T PRK11022 74 DLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVH--QGGNKKTRRQRAIDLLNQVGIPDPASRLDVY- 150 (326)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHCCCCChHHHHhCC-
Confidence 76431 1 123699999997 4789999999886654322 123445566778999999999753 3333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEE
Q 000555 972 GFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELL 1050 (1427)
Q Consensus 972 g~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~ 1050 (1427)
+..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|+|+
T Consensus 151 ----p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~ 225 (326)
T PRK11022 151 ----PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKII 225 (326)
T ss_pred ----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 358999999999999999999999999999999999999999999999976 5899999999976 4667899999
Q ss_pred EEecCcEEEEccCC
Q 000555 1051 LMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1051 ~l~~gg~~~~~g~~ 1064 (1427)
+|.+ |+++..|+.
T Consensus 226 vm~~-G~ive~g~~ 238 (326)
T PRK11022 226 VMYA-GQVVETGKA 238 (326)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 688888875
No 283
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=335.90 Aligned_cols=225 Identities=26% Similarity=0.301 Sum_probs=182.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+....... + ..+...+|+|||++|++||++||+|+||||||||+++|+|.... .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~--~-~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF--K-PERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc--c-cCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478999997774321100 0 01235799999999999999999999999999999999998653 579999999876
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000555 906 EQS------TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDALVGFPGS 976 (1427)
Q Consensus 906 ~~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 976 (1427)
... .+++.++||+|++ .+.|.+||.+++....... ......+..+.+.++++.++|.+ ..+...
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p----- 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRYP----- 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCCC-----
Confidence 431 3456799999997 5889999999987654332 12344556677899999999963 455554
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++|||||+.+|++|++||||++||..++..+++.|+++.++ |.|||++||+++ .+...+|++++|.+
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 589999999999999999999999999999999999999999999999764 999999999975 45668999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 688888875
No 284
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=360.41 Aligned_cols=221 Identities=22% Similarity=0.306 Sum_probs=184.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++++++ ++.+|+||||++++||+++|+||||||||||+++|+|...+++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 378999987662 3469999999999999999999999999999999999765323589999999876
Q ss_pred Cccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQST----FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~~~----~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.... .++.+|||+|++.+++.+||+||+.+....+.....+.++..+.++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 4321 24569999999989999999999988654321111223344566889999999988777776 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||+++|++. .+.+.+|++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999975 46678999999986 678888
Q ss_pred cCCCC
Q 000555 1062 GKLGV 1066 (1427)
Q Consensus 1062 g~~~~ 1066 (1427)
|+...
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 87653
No 285
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.7e-34 Score=341.33 Aligned_cols=203 Identities=23% Similarity=0.335 Sum_probs=174.5
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc----CCc---cc---c-cceEEEEc
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP----KEQ---ST---F-ARISGYVE 918 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv~ 918 (1427)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+ ... .. + ++.++||+
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 34568999999999999999999999999999999999865 357999999962 211 11 2 24799999
Q ss_pred cCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000555 919 QNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPS 998 (1427)
Q Consensus 919 Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~ 998 (1427)
|++.++|.+||+||+.|+...+ ..+.+++.+.++++++.++|.+..+..+ ..||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999886442 2345566678899999999998888776 4799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 999 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 999 illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999764 899999999986 57788999999986 678888875
No 286
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.4e-34 Score=323.12 Aligned_cols=196 Identities=22% Similarity=0.361 Sum_probs=161.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------cc-ceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQ-RTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~-~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. +|+|.++|+++.... .+ +.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999875 999999999875432 12 579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.+........ ..+ ....++++++.+||++..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~--- 136 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS-----------VKE------------------------AKERAYEMLEKVGLEHRIN--- 136 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCChhhhh---
Confidence 88999999999864322110 000 0112566888999975433
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
+.+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++++.++|+|++.|++ .++ +.+|+++
T Consensus 137 --~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~-~~~d~v~ 212 (221)
T TIGR02211 137 --HRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDL-ELA-KKLDRVL 212 (221)
T ss_pred --CChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHH-hhcCEEE
Confidence 345679999999999999999999999999999999999999999999998765688999876664 444 5589999
Q ss_pred EEeCCeEE
Q 000555 400 LLSEGHLV 407 (1427)
Q Consensus 400 lL~~G~iv 407 (1427)
+|++|+++
T Consensus 213 ~l~~G~i~ 220 (221)
T TIGR02211 213 EMKDGQLF 220 (221)
T ss_pred EEeCCEec
Confidence 99999985
No 287
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=328.57 Aligned_cols=216 Identities=25% Similarity=0.312 Sum_probs=175.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|+|||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 589999988663 24589999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL----RDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. ..+..+..+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87642 2345679999999888875 999999987543211 11223334567889999999642 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+...+|++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 789999999976 4667899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 6 678887764
No 288
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.8e-34 Score=318.58 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=166.2
Q ss_pred eccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-ccccceEEEEccCCCCCCCCCHHHH
Q 000555 854 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-STFARISGYVEQNDIHSPQVTVEES 932 (1427)
Q Consensus 854 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 932 (1427)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999865 357999999987643 2345679999999999999999999
Q ss_pred HHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000555 933 LWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1012 (1427)
Q Consensus 933 l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~ 1012 (1427)
+.+...... . ...+..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987542211 1 11223456788999999988777765 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccC
Q 000555 1013 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGK 1063 (1427)
Q Consensus 1013 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~ 1063 (1427)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999975 46678999999986 67776653
No 289
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.4e-33 Score=357.26 Aligned_cols=123 Identities=25% Similarity=0.358 Sum_probs=102.6
Q ss_pred CCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 000555 926 QVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSGLSTEQRKRLTIAVELVANP---SIIF 1001 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p---~ill 1001 (1427)
.+||.|++.|...+. . .....+.++.++|... .+..+ ..||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988875442 1 1224578899999763 45544 479999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe-----cCcEEEEccCC
Q 000555 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGRVIYGGKL 1064 (1427)
Q Consensus 1002 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~g~~ 1064 (1427)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999974 456799999994 57899999875
No 290
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.7e-34 Score=324.10 Aligned_cols=210 Identities=24% Similarity=0.281 Sum_probs=169.1
Q ss_pred eeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-CCceeEEEECCeecCcccc-cceEEEEccCCC--CCCCCC
Q 000555 169 ILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS-LKKSGNITYNGYKLDEFHV-QRTSAYISQTDN--HIPELT 244 (1427)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~~lT 244 (1427)
+|+|+|+++++|++++|+||||||||||+++|+|.++|. .+.+|+|.++|+++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999999871 0138999999998764433 357999999974 556789
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
+.|++.+.....+.. .. ....+++++++.+||++. +...+..+
T Consensus 81 ~~~~~~~~~~~~~~~----------~~-------------------------~~~~~~~~~l~~~~l~~~--~~~~~~~~ 123 (230)
T TIGR02770 81 MGNHAIETLRSLGKL----------SK-------------------------QARALILEALEAVGLPDP--EEVLKKYP 123 (230)
T ss_pred HHHHHHHHHHHcCcc----------HH-------------------------HHHHHHHHHHHHcCCCch--HHHHhCCh
Confidence 999998754322110 00 001235678899999732 11234456
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.++.++|+|++.| ..+++..++|++++|++|
T Consensus 124 ~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH-~~~~~~~~~d~i~~l~~G 202 (230)
T TIGR02770 124 FQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITH-DLGVVARIADEVAVMDDG 202 (230)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999999999999987655889998755 456788899999999999
Q ss_pred eEEEecChHHHH
Q 000555 405 HLVYQGPRAEVL 416 (1427)
Q Consensus 405 ~iv~~G~~~~~~ 416 (1427)
+++..|+++++.
T Consensus 203 ~i~~~~~~~~~~ 214 (230)
T TIGR02770 203 RIVERGTVKEIF 214 (230)
T ss_pred EEEEeCCHHHHH
Confidence 999999998875
No 291
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.7e-34 Score=323.51 Aligned_cols=201 Identities=29% Similarity=0.464 Sum_probs=169.0
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc--ccccceEEEEc-cCCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ--STFARISGYVE-QNDIHSPQ 926 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~~~~~~~ 926 (1427)
+.+++|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34679999999999999999999999999999999999765 357999999986432 23456799997 55677889
Q ss_pred CCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000555 927 VTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1427)
Q Consensus 927 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPT 1006 (1427)
+|++|++.+...+. ....++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 99999998865442 2233444556788999999988888776 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 1007 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998764 899999999975 56778999999986 5776654
No 292
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2e-34 Score=318.32 Aligned_cols=189 Identities=24% Similarity=0.402 Sum_probs=162.1
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC---c----ccccceEEEEccCCCCC
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE---Q----STFARISGYVEQNDIHS 924 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~~~~~ 924 (1427)
+++|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 468999999999999999999999999999999999865 35799999998742 1 12356799999999999
Q ss_pred CCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000555 925 PQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1427)
Q Consensus 925 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDE 1004 (1427)
+..|++||+.+..... .....+..+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999999865432 2233444567889999999988777765 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 1005 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777899999999975 45679999875
No 293
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=325.41 Aligned_cols=219 Identities=22% Similarity=0.299 Sum_probs=174.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC-ceeEEEEEECCccC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG-GYIEGDIKISGYPK 905 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 905 (1427)
++++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|.... .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 67888887663 24689999999999999999999999999999999997531 24579999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
.. ..+++.++|++|++.+++ .|++||+.+....+... .......+.++++++.+++.+....... .....||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567999999998887 69999998865432110 0122334567889999999532111111 123579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999975 46778999999986 6788777
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 64
No 294
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=318.75 Aligned_cols=169 Identities=25% Similarity=0.350 Sum_probs=134.1
Q ss_pred eeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHh
Q 000555 859 SGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSAN 938 (1427)
Q Consensus 859 s~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~ 938 (1427)
.++|..||+++++||||-||||+.++|+|..++ .+|+ .. .-.++|=||--.--.+.||++-|.-...
T Consensus 361 ~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~~ 427 (591)
T COG1245 361 EGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAIR 427 (591)
T ss_pred CCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhhh
Confidence 577888999999999999999999999997653 3454 11 1236888887555578899997754332
Q ss_pred ccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHH
Q 000555 939 LRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1018 (1427)
Q Consensus 939 l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~ 1018 (1427)
-+.. ..-...++.+-|.|+.+.+..+ .+|||||.|||+||.+|.+++++.+||||++.||.+.+..+-
T Consensus 428 ~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~va 495 (591)
T COG1245 428 SAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVA 495 (591)
T ss_pred hhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHH
Confidence 2111 1123467888899999998887 489999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 1019 RTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 1019 ~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
++||+... +++|.+++-||.-. +--..||++|..
T Consensus 496 kvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 496 KVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 99999875 47899999999653 222468888885
No 295
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=334.46 Aligned_cols=206 Identities=24% Similarity=0.347 Sum_probs=169.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCC-
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDN- 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~- 238 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 46999999999999999999999999999999999999986 99999999987431 23457999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
.+..+||+||+.|+....+.. .. +...+++++++.+||+. .
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gL~~----~ 137 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS-----------ED------------------------EAKEKALKWLKKVGLSE----D 137 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCCh----h
Confidence 344689999999865432110 00 00123567889999952 1
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
..++.++.|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ .|.|||++ +|...++.++||++
T Consensus 138 ~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvliv-sH~~~~~~~~~d~v 215 (287)
T PRK13641 138 LISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILV-THNMDDVAEYADDV 215 (287)
T ss_pred HhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCCHHHHHHhCCEE
Confidence 23445667999999999999999999999999999999999999999999999864 48899886 45567788999999
Q ss_pred EEEeCCeEEEecChHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~ 416 (1427)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998875
No 296
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.9e-35 Score=371.38 Aligned_cols=215 Identities=28% Similarity=0.448 Sum_probs=176.7
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|.++. ++++|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 45999999998752 45789999999999999999999999999999999998763 58999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHH-HH--HcCCcccccccccCCCCCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEV-MR--LVELDSLRDALVGFPGSSG 978 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~-l~--~l~L~~~~~~~vg~~~~~~ 978 (1427)
++. ..+|+.++||+|++.+|. -||+||+.++.. +.++++..+.++.+ +. ..++.+..||.+| +++.+
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at~eei~~a~k~a~~~d~I~~lp~g~dt~vg-e~G~~ 465 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DATDEEIEEALKLANAHEFIANLPDGYDTIVG-ERGVN 465 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHHHhCcccccceec-CCCcc
Confidence 654 567889999999999987 899999998631 23444333222222 00 1133445789998 44567
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
||||||||++||||++++|+||+||||||+||+.++..|++.++++. +++|+++++|+++ ....+|+|++|++ |++
T Consensus 466 LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~-G~i 541 (567)
T COG1132 466 LSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN-GRI 541 (567)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999876 5789999999986 4556999999987 578
Q ss_pred EEccCC
Q 000555 1059 IYGGKL 1064 (1427)
Q Consensus 1059 ~~~g~~ 1064 (1427)
+..|+.
T Consensus 542 ~e~G~h 547 (567)
T COG1132 542 VERGTH 547 (567)
T ss_pred EEecCH
Confidence 888875
No 297
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-34 Score=293.41 Aligned_cols=203 Identities=26% Similarity=0.388 Sum_probs=175.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
..+|+|+|+.|.+||.++++||||||||||||+++|..+|. .|+|.+||++++.. -..-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999986 89999999988643 23459999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||++|+.+++|..+. .| ..++.+.+..+||+... ++++-.
T Consensus 93 dNvafgL~l~Gi~k~--------~R---------------------------~~~a~q~l~~VgL~~~~-----~~~i~q 132 (259)
T COG4525 93 DNVAFGLQLRGIEKA--------QR---------------------------REIAHQMLALVGLEGAE-----HKYIWQ 132 (259)
T ss_pred HHHHHHHHhcCCCHH--------HH---------------------------HHHHHHHHHHhCccccc-----ccceEe
Confidence 999999999886321 01 12356788999998644 455567
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe--CC
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS--EG 404 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~--~G 404 (1427)
|||||||||.|||||..+|+.|+||||+++||.-+++++.+.|-++.+..|+.++++ +|...|..-+++++++|+ .|
T Consensus 133 LSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lli-TH~ieEAlflatrLvvlsp~pg 211 (259)
T COG4525 133 LSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLI-THDIEEALFLATRLVVLSPGPG 211 (259)
T ss_pred ecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEE-eccHHHHHhhhheeEEecCCCc
Confidence 999999999999999999999999999999999999999999998888889998885 567788888999999998 57
Q ss_pred eEEEecChHHH
Q 000555 405 HLVYQGPRAEV 415 (1427)
Q Consensus 405 ~iv~~G~~~~~ 415 (1427)
+|+..=+++-.
T Consensus 212 Rvv~~~~~df~ 222 (259)
T COG4525 212 RVVERLPLDFA 222 (259)
T ss_pred eeeEecCCCHH
Confidence 99987666533
No 298
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.1e-33 Score=363.72 Aligned_cols=211 Identities=23% Similarity=0.381 Sum_probs=175.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|+++. ++++|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 36899999998741 2468999999999999999999999999999999999866 357999999987
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
..+ ..+++.+|||+|++.+++. |++||+.++.. .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~----~~~~~~----~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAK----ENVSQD----EIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehhH-HHHHHHhccCC----CCCCHH----HHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 4578899999999988864 99999987521 123332 3455666655543 357778754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|+|++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4679999999999999999999999999999999999999999999875 4799999999975 5678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 688888874
No 299
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.8e-33 Score=363.21 Aligned_cols=210 Identities=30% Similarity=0.415 Sum_probs=175.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++++||+|+++. .++++|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999998752 235689999999999999999999999999999999998663 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
.++ ..+++.+|||+|++.+++ .|++||+.++. .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~~----~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPDA----DLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCHH----HHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 643 457889999999998885 69999997641 123333 3556666666543 356777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|+|++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999975 5677999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 688888875
No 300
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=328.71 Aligned_cols=215 Identities=27% Similarity=0.348 Sum_probs=179.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++. ..+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4789999876631 12358999999999999999999999999999999999865 3579999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.++|++|++. +++..|+.+|+.+..... ....++..+.++++++.+++.+..+..+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 43 234567999999974 678889999998864322 1233444566889999999988777665 58999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 354 4999999986 68888
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 223 ~g~~ 226 (269)
T PRK13648 223 EGTP 226 (269)
T ss_pred ecCH
Confidence 8875
No 301
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.3e-34 Score=335.35 Aligned_cols=224 Identities=21% Similarity=0.299 Sum_probs=181.1
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-eeEEEEEECCcc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-YIEGDIKISGYP 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 904 (1427)
.++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47999998766421 12356999999999999999999999999999999999976531 237999999987
Q ss_pred CCcc---c---cc-ceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000555 905 KEQS---T---FA-RISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPG 975 (1427)
Q Consensus 905 ~~~~---~---~~-~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 975 (1427)
+... . ++ +.++||+|++ .+.|.+|+.+++....... ...+.++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~--~~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLH--KGMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 6431 1 22 4799999998 6889999999987654432 1234455567788999999997543221 1 23
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|.+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999764 899999999976 46678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 688888875
No 302
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-34 Score=322.69 Aligned_cols=202 Identities=26% Similarity=0.328 Sum_probs=167.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999875 999999998875432 24579999999988999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhC-Ccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLG-LDLCSETVVGN 321 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~~t~vg~ 321 (1427)
+||+||+.++....+.. . ....+.+++.++ ++. ..+
T Consensus 90 ~tv~~~l~~~~~~~~~~-----------~---------------------------~~~~~~~l~~~~~l~~-----~~~ 126 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-----------S---------------------------RKIPDEIYELFPVLKE-----MLG 126 (230)
T ss_pred CcHHHHHHHHHHhcCcc-----------h---------------------------HHHHHHHHHHHHhHHH-----Hhh
Confidence 99999998865332110 0 011344566665 333 234
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+.++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.++.++|+|++.|+ ..++.++||++++|
T Consensus 127 ~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~v~~l 205 (230)
T TIGR03410 127 RRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQY-LDFARELADRYYVM 205 (230)
T ss_pred CChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCC-HHHHHHhCCEEEEE
Confidence 45667999999999999999999999999999999999999999999999876558899987555 56788899999999
Q ss_pred eCCeEEEecChHHH
Q 000555 402 SEGHLVYQGPRAEV 415 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~ 415 (1427)
++|++++.|+.+++
T Consensus 206 ~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 206 ERGRVVASGAGDEL 219 (230)
T ss_pred ECCEEEEECCHHHc
Confidence 99999999998876
No 303
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=320.04 Aligned_cols=216 Identities=23% Similarity=0.324 Sum_probs=179.2
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-C-CCCceeEEEECCeecCccc-------ccceEEEEccC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD-S-SLKKSGNITYNGYKLDEFH-------VQRTSAYISQT 236 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~ 236 (1427)
..++++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-... ..+.|+||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 3346799999999764332 12579999999
Q ss_pred C--CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccc
Q 000555 237 D--NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLC 314 (1427)
Q Consensus 237 ~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 314 (1427)
+ .+-|.+||.+.+.-..+..... .++ ++...++.++|+.+||++-
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~---------~~~------------------------~ea~~~a~~~L~~Vgi~~~ 143 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKG---------LSK------------------------KEAKERAIELLELVGIPDP 143 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcc---------hhh------------------------HHHHHHHHHHHHHcCCCCH
Confidence 6 4788899998887654432110 000 0112346778999999853
Q ss_pred cccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhh
Q 000555 315 SETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDL 394 (1427)
Q Consensus 315 ~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~ 394 (1427)
. .+.+.++.+|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.++.|.++|+ ++|+..-+.++
T Consensus 144 ~--~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiil-ITHDl~vva~~ 220 (316)
T COG0444 144 E--RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALIL-ITHDLGVVAEI 220 (316)
T ss_pred H--HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHHh
Confidence 2 35577888999999999999999999999999999999999999999999999999888999988 46778889999
Q ss_pred cCcEEEEeCCeEEEecChHHHHH
Q 000555 395 FDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 395 ~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
||||+||+.|+||+.|+.+++..
T Consensus 221 aDri~VMYaG~iVE~g~~~~i~~ 243 (316)
T COG0444 221 ADRVAVMYAGRIVEEGPVEEIFK 243 (316)
T ss_pred cceEEEEECcEEEEeCCHHHHhc
Confidence 99999999999999999998853
No 304
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=330.87 Aligned_cols=219 Identities=24% Similarity=0.329 Sum_probs=179.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++... +...+.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 378999988764210 0013469999999999999999999999999999999999865 3579999999876
Q ss_pred Cc----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 906 EQ----STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 906 ~~----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. ...++.+||++|++. .+...||.|++.|..... ..+..+..+.++++++.++|.+..++.+ ..||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 234677999999974 233469999998875322 2334455567899999999998888776 4899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++. .+|++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999976 4999999999986 344 4999999986 6788
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
..|+.
T Consensus 224 ~~g~~ 228 (280)
T PRK13633 224 MEGTP 228 (280)
T ss_pred EecCH
Confidence 88875
No 305
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=341.65 Aligned_cols=196 Identities=24% Similarity=0.391 Sum_probs=169.1
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCCCCCCCC
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 244 (1427)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999876 99999999887431 23568999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|+.+.. ...+++++++.+||++..+ +.+
T Consensus 93 v~enl~~~~~~~-----------------------------------------~~~~~~~~l~~~gl~~~~~-----~~~ 126 (352)
T PRK11144 93 VRGNLRYGMAKS-----------------------------------------MVAQFDKIVALLGIEPLLD-----RYP 126 (352)
T ss_pred HHHHHHhhhhhh-----------------------------------------hHHHHHHHHHHcCCchhhh-----CCc
Confidence 999998853200 0113567889999975444 345
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++. |...++.++||++++|++|
T Consensus 127 ~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vT-Hd~~~~~~~~d~i~~l~~G 205 (352)
T PRK11144 127 GSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVS-HSLDEILRLADRVVVLEQG 205 (352)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEe-cCHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999999876688998865 4557889999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
+++..|+++++..
T Consensus 206 ~i~~~g~~~~i~~ 218 (352)
T PRK11144 206 KVKAFGPLEEVWA 218 (352)
T ss_pred EEEEecCHHHHHh
Confidence 9999999998853
No 306
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=328.80 Aligned_cols=218 Identities=25% Similarity=0.370 Sum_probs=176.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc------eeEEEEEE
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG------YIEGDIKI 900 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~------~~~G~i~i 900 (1427)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 57888887652 346899999999999999999999999999999999976531 12799999
Q ss_pred CCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000555 901 SGYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 901 ~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
+|.+... ..+++.++|++|++..++.+||+||+.+....... ......+..+.++++++.+++.+..++.+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987542 23455689999998766679999999875321100 01111233456788999999987776654
Q ss_pred CCCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhh
Q 000555 977 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1046 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~---------~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 1046 (1427)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999976 466789
Q ss_pred ceEEEEecCcEEEEccCC
Q 000555 1047 DELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1047 D~v~~l~~gg~~~~~g~~ 1064 (1427)
|++++|++ |+++..|+.
T Consensus 223 d~i~~l~~-G~i~~~g~~ 239 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAP 239 (272)
T ss_pred CEEEEEEC-CeEEEecCH
Confidence 99999986 678888875
No 307
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=332.59 Aligned_cols=219 Identities=22% Similarity=0.325 Sum_probs=176.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++++++... .....+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478999988763210 001358999999999999999999999999999999999865 3579999999875
Q ss_pred Cc--------ccccceEEEEccCCCC-CCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000555 906 EQ--------STFARISGYVEQNDIH-SPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPG 975 (1427)
Q Consensus 906 ~~--------~~~~~~~gyv~Q~~~~-~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 975 (1427)
.. ..+++.++|++|++.. +...||+||+.+..... ....++..+.++++++.++|. +..+..+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 31 2345679999999732 23469999998864321 123344445678899999994 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 57999999999999999999999999999999999999999999999876 4899999999976 57788999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 677777764
No 308
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=336.35 Aligned_cols=209 Identities=17% Similarity=0.248 Sum_probs=174.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCC--C
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTD--N 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~--~ 238 (1427)
+++|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999875 89999999987543 2356799999997 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+.+.+||.+++.+....... ..+. +...++.++++.+||+..
T Consensus 105 l~p~~~v~~~l~~~~~~~~~----------~~~~------------------------~~~~~~~~~l~~~gL~~~---- 146 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS----------LSAA------------------------ERREKALAMMAKVGLRPE---- 146 (327)
T ss_pred cCCccCHHHHHHHHHHHccC----------CCHH------------------------HHHHHHHHHHHHCCCChH----
Confidence 78889999999876443210 0000 011236778999999631
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
.-++.++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.++.|.|+|++ +|+...+.+++|+|
T Consensus 147 ~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~i-THdl~~~~~~adrv 225 (327)
T PRK11308 147 HYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFI-SHDLSVVEHIADEV 225 (327)
T ss_pred HhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE-eCCHHHHHHhCCEE
Confidence 22455678999999999999999999999999999999999999999999999977778899886 56667788899999
Q ss_pred EEEeCCeEEEecChHHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~~ 417 (1427)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 309
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=324.49 Aligned_cols=220 Identities=22% Similarity=0.305 Sum_probs=176.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--Cc-eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478999987663 2458999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.++.. ..+++.++|++|+..+++.+|++||+.+..... ...+..+..+.++++++.+++......... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLN--GRVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 234677999999999999999999998764322 111223334567888999998642111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999975 56788999999986 68
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+...|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 8887764
No 310
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=326.58 Aligned_cols=201 Identities=25% Similarity=0.383 Sum_probs=166.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHH
Confidence 36999999999999999999999999999999999999875 9999999998753 234689999998888889999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||+.++....+.. ..+ ....++++++.+||++..+. .+..
T Consensus 89 e~l~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~gl~~~~~~-----~~~~ 128 (255)
T PRK11248 89 DNVAFGLQLAGVE-----------KMQ------------------------RLEIAHQMLKKVGLEGAEKR-----YIWQ 128 (255)
T ss_pred HHHHhHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCChhHhhC-----Chhh
Confidence 9998864432210 000 01135678899999754443 4567
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe--CC
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS--EG 404 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~--~G 404 (1427)
|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|++++++.|+|+|++. |...++.++||+|++|+ +|
T Consensus 129 LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivs-H~~~~~~~~~d~i~~l~~~~G 207 (255)
T PRK11248 129 LSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLIT-HDIEEAVFMATELVLLSPGPG 207 (255)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCCc
Confidence 9999999999999999999999999999999999999999999998655588998865 45567889999999998 59
Q ss_pred eEEEecChH
Q 000555 405 HLVYQGPRA 413 (1427)
Q Consensus 405 ~iv~~G~~~ 413 (1427)
+++..++.+
T Consensus 208 ~i~~~~~~~ 216 (255)
T PRK11248 208 RVVERLPLN 216 (255)
T ss_pred EEEEEecCC
Confidence 999987754
No 311
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=333.63 Aligned_cols=220 Identities=20% Similarity=0.283 Sum_probs=177.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.+.. +.+.+|+|+|++|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5899999987641 234689999999999999999999999999999999997531 23579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHH-HHHHHHHHHHHcCCcccccccccCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQ-RHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~-~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
.++.. ..+++.++||+|++.+++ .|++||+.|..... ..++++ ..+.++++++.++|.+..++.++. .+
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~---~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~-~~ 223 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN---GINDRKILEKIVEKSLKSAALWDEVKDDLDK-AG 223 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc---CCChHHHHHHHHHHHHHHcCCcchhhhhhhC-Cc
Confidence 98742 235678999999998875 79999999864321 122222 234567888888875433334433 34
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 699999999975 46667999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 78887765
No 312
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=326.36 Aligned_cols=222 Identities=23% Similarity=0.283 Sum_probs=178.2
Q ss_pred CCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEE
Q 000555 823 QPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIK 899 (1427)
Q Consensus 823 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~ 899 (1427)
.+..++++|++++++ .+++|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344689999988663 24689999999999999999999999999999999997542 13589999
Q ss_pred ECCccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000555 900 ISGYPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFP 974 (1427)
Q Consensus 900 i~g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 974 (1427)
++|.+... ...++.++|++|++.+++ .||+||+.+..... .....++..+.+.++++.++|.+..+.... .
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~ 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH-K 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc-C
Confidence 99987632 124567999999988887 69999998864321 112333445668889999998532222221 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
.+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.+|++++|++
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~ 237 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL 237 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC
Confidence 235899999999999999999999999999999999999999999999985 4799999999986 57788999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 238 -G~i~~~g~~ 246 (267)
T PRK14237 238 -GDLIEYDKT 246 (267)
T ss_pred -CEEEEeCCH
Confidence 688888775
No 313
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-34 Score=370.45 Aligned_cols=210 Identities=24% Similarity=0.394 Sum_probs=174.6
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||++.+. +++++|+|+|++++|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986442 1246899999999999999999999999999999999986 3 47999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-------SLRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 974 (1427)
..+ ..+++.++||+|++.+++ .|++||+.++. .+.+++ .++++++..++. +-.||.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~e----ei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASDE----QLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCHH----HHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 457889999999998886 59999998852 123433 345555555543 3457888865
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999875 5899999999975 5678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 688888874
No 314
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.9e-34 Score=320.56 Aligned_cols=195 Identities=25% Similarity=0.363 Sum_probs=161.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999875 99999999987542 1346799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++....+.. .. ....+++++++.+||++..++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 132 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP-----------PR------------------------EIRKRVPAALELVGLSHKHRA--- 132 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCCHHHhhC---
Confidence 9999999999875432210 00 001135678888999765444
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+.+||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.++||++++
T Consensus 133 --~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tiiivtH~-~~~~~~~~d~i~~ 208 (214)
T cd03292 133 --LPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AGTTVVVATHA-KELVDTTRHRVIA 208 (214)
T ss_pred --ChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhCCEEEE
Confidence 3457999999999999999999999999999999999999999999999865 48898887554 5677789999999
Q ss_pred EeCCeE
Q 000555 401 LSEGHL 406 (1427)
Q Consensus 401 L~~G~i 406 (1427)
|++|++
T Consensus 209 l~~G~~ 214 (214)
T cd03292 209 LERGKL 214 (214)
T ss_pred EeCCcC
Confidence 999974
No 315
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.3e-32 Score=356.97 Aligned_cols=212 Identities=27% Similarity=0.427 Sum_probs=176.8
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|+++. .++++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36999999998842 234689999999999999999999999999999999998763 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-------SLRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 974 (1427)
.++ ..+++.++||+|++.+++ .|++||+.++. .+.+++ .+.++++..++. +-.||.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~~~----~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYADDE----EILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCCHH----HHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 457889999999998886 59999998652 123333 345566665554 3457778754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 46799999999999999999999999999999999999999999999876 4799999999975 5678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 688888874
No 316
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=324.10 Aligned_cols=209 Identities=26% Similarity=0.363 Sum_probs=173.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 478899987652 2458999999999999999999999999999999999765 3579999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.++|++|++.+++ .||+||+.+....+ . .....++++++.+++. +..+..+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRDV-----KNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCCc-----ccCCH
Confidence 32 234567999999988876 69999988653321 1 1124577889999996 4555543 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++||+||+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999976 46778999999986 57777
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 7654
No 317
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-34 Score=329.63 Aligned_cols=217 Identities=25% Similarity=0.335 Sum_probs=179.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCce-eEEEEEECCcc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY-IEGDIKISGYP 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 904 (1427)
.++++|+++.++. ..+.+|+|||++|++||+++|+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4789999886631 12458999999999999999999999999999999999765321 23899999988
Q ss_pred CCc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 905 KEQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
... ...++.+||++|++. .++..||+||+.|..... ..+.++..+.++++++.++|.+..+..+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 643 234567999999974 677899999998764321 2344555667889999999988777765 5899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 8999999999863 4 57999999986 6788
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
..|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 88875
No 318
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=331.65 Aligned_cols=213 Identities=24% Similarity=0.403 Sum_probs=174.8
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIP 241 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~ 241 (1427)
.++++|+|+||.+.+|+-++|+||||||||||.|+|.|..+|. +|.|.+||-+++.. .+-+.|||.||+-.+|+
T Consensus 347 ~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~ 423 (580)
T COG4618 347 QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD 423 (580)
T ss_pred CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC
Confidence 3468999999999999999999999999999999999999875 99999999887654 34588999999877776
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
-||.|||.= +. ++.|-++..+++...+ ++++ .+.|++.+||.||+
T Consensus 424 -GTIaeNIaR---f~-----------------------~~~d~~kIieAA~lAg------vHel--Il~lP~GYdT~iG~ 468 (580)
T COG4618 424 -GTIAENIAR---FG-----------------------EEADPEKVIEAARLAG------VHEL--ILRLPQGYDTRIGE 468 (580)
T ss_pred -CcHHHHHHh---cc-----------------------ccCCHHHHHHHHHHcC------hHHH--HHhCcCCccCccCC
Confidence 499999952 11 1111122222222111 2222 34689999999999
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
.+. +||||||||+++|||++++|.+++||||-|.||+.....+.+.|.+.. ..|.|+|+..|. +.+...+|+|++|
T Consensus 469 ~G~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvviaHR--Ps~L~~~Dkilvl 544 (580)
T COG4618 469 GGA-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVIAHR--PSALASVDKILVL 544 (580)
T ss_pred CCC-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEEecC--HHHHhhcceeeee
Confidence 875 699999999999999999999999999999999999999999999975 457787776555 4789999999999
Q ss_pred eCCeEEEecChHHHHHHH
Q 000555 402 SEGHLVYQGPRAEVLEFF 419 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~~f 419 (1427)
++|++-.+|+.+|++...
T Consensus 545 ~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 545 QDGRIAAFGPREEVLAKV 562 (580)
T ss_pred cCChHHhcCCHHHHHHHh
Confidence 999999999999998754
No 319
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=327.77 Aligned_cols=215 Identities=24% Similarity=0.290 Sum_probs=173.9
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEEC
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKIS 901 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 901 (1427)
..++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3589999987663 24589999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----cccccccc
Q 000555 902 GYPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVG 972 (1427)
Q Consensus 902 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg 972 (1427)
|.+... ..+++.++|++|++.+++ .||+||+.+....+. ... +..+.++++++.+++. +..+..+
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~- 152 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNESG- 152 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCCCc-
Confidence 987531 234567999999998888 499999988764331 111 2234567788888764 2334333
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 973 FPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 973 ~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|
T Consensus 153 ----~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 153 ----YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 57999999999999999999999999999999999999999999999854 789999999986 577889999999
Q ss_pred ec----------CcEEEEccCC
Q 000555 1053 KR----------GGRVIYGGKL 1064 (1427)
Q Consensus 1053 ~~----------gg~~~~~g~~ 1064 (1427)
++ +|++++.|+.
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred eccccccccccccceEEEeCCH
Confidence 85 2567887765
No 320
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=319.47 Aligned_cols=197 Identities=30% Similarity=0.463 Sum_probs=163.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~~~~~~~lT 244 (1427)
.++|+|+|+++++| +++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 36999999999999 99999999999999999999999876 99999999876532 23567999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.+.....+.. +. + ....++.+++.+||++..++. +
T Consensus 89 v~~~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~-----~ 128 (211)
T cd03264 89 VREFLDYIAWLKGIP-----------SK----------E--------------VKARVDEVLELVNLGDRAKKK-----I 128 (211)
T ss_pred HHHHHHHHHHHhCCC-----------HH----------H--------------HHHHHHHHHHHCCCHHHHhCc-----h
Confidence 999999865432210 00 0 011356788899997655443 4
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ ++|+|++. |...++.+++|++++|++|
T Consensus 129 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vs-H~~~~~~~~~d~i~~l~~g 205 (211)
T cd03264 129 GSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILST-HIVEDVESLCNQVAVLNKG 205 (211)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEc-CCHHHHHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999999864 47888864 5556777899999999999
Q ss_pred eEEEec
Q 000555 405 HLVYQG 410 (1427)
Q Consensus 405 ~iv~~G 410 (1427)
++++.|
T Consensus 206 ~i~~~g 211 (211)
T cd03264 206 KLVFEG 211 (211)
T ss_pred EEEecC
Confidence 998765
No 321
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.6e-34 Score=310.92 Aligned_cols=190 Identities=53% Similarity=0.879 Sum_probs=161.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCC--CCceeEEEEEECCc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRK--TGGYIEGDIKISGY 903 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 903 (1427)
.++++|+++.++.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 5789999987742100 01246999999999999999999999999999999999986 4 46899999999
Q ss_pred cCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000555 904 PKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQ 983 (1427)
Q Consensus 904 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 983 (1427)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445678999999999999999999997643110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 984 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 984 rqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|||++|||||+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++.+.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986557778999999986 5666543
No 322
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=324.90 Aligned_cols=206 Identities=21% Similarity=0.384 Sum_probs=170.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999875 899999999875432 24679999999988888
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.+..+.... .... .....++++++.+||+... +.
T Consensus 93 ~tv~enl~~~~~~~~~----------~~~~------------------------~~~~~~~~~l~~~~l~~~~-----~~ 133 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD----------LSAE------------------------QREDRANELMEEFHIEHLR-----DS 133 (241)
T ss_pred CcHHHHHhhhhhcccc----------cCHH------------------------HHHHHHHHHHHHcCCHHHh-----hc
Confidence 9999999876432110 0000 0012356788889987533 44
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
..+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.++||++++|+
T Consensus 134 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~-~~~~~~~~d~v~~l~ 211 (241)
T PRK10895 134 MGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHN-VRETLAVCERAYIVS 211 (241)
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcC-HHHHHHhcCEEEEEe
Confidence 4567999999999999999999999999999999999999999999998864 58899987654 467889999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (241)
T PRK10895 212 QGHLIAHGTPTEIL 225 (241)
T ss_pred CCeEEeeCCHHHHh
Confidence 99999999988764
No 323
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.8e-35 Score=365.98 Aligned_cols=286 Identities=22% Similarity=0.296 Sum_probs=206.1
Q ss_pred CCCcceeeecccccch-hhhHHHHHHhhhcCccCHHHHHHH----HHHHHhhcCCCCCccEEEEeeeEEEEEEecCCCcC
Q 000555 65 GGEAKTETIDVRKLNR-SRRELVVSKALATNDQDNYKLLSA----IKERLDRVGIEVPKVEVRFQNLKVVADVQTGSRAL 139 (1427)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~ 139 (1427)
|.++++++||++.+.. +||..+|+++....++.+++++.. ..+++.+. .|... . . ......
T Consensus 207 g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~----~--~----~~~~~~- 272 (529)
T PRK15134 207 NMGLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATLFSAPTHPYTQKLLNS---EPSGD----P--V----PLPEPA- 272 (529)
T ss_pred CCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHHhhCCCCHHHHHHHHh---Ccccc----c--c----ccCCCC-
Confidence 5677778899998765 899999999988888788776531 01111110 01000 0 0 000000
Q ss_pred CchhHHhHHHHHHHhhhccccCCc--------cccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCce
Q 000555 140 PTLVNATRDVFERILTGLRIFKPK--------RHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKS 211 (1427)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~ 211 (1427)
+.+ ++ +.++...+++ ...+++|+|+|+++++|++++|+||||||||||+++|+|.++ . +
T Consensus 273 ~~~-------l~--~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~---~ 339 (529)
T PRK15134 273 SPL-------LD--VEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-S---Q 339 (529)
T ss_pred CCc-------cc--ccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-C---C
Confidence 000 00 1122221211 013579999999999999999999999999999999999984 3 8
Q ss_pred eEEEECCeecCccc------ccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChh
Q 000555 212 GNITYNGYKLDEFH------VQRTSAYISQTD--NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPE 283 (1427)
Q Consensus 212 G~V~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1427)
|+|+++|+++.... .++.++|++|++ .+++.+||+||+.++....+. . ....
T Consensus 340 G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~--~-------~~~~----------- 399 (529)
T PRK15134 340 GEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQP--T-------LSAA----------- 399 (529)
T ss_pred cEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccc--c-------CChH-----------
Confidence 99999998875321 245699999986 477889999999986432210 0 0000
Q ss_pred HHHHHhhhhcCCCcccccHHHHHHHhCCc-cccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHH
Q 000555 284 IDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTT 362 (1427)
Q Consensus 284 ~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~ 362 (1427)
..+.+++++++.+||+ ... ++.+..|||||||||+||++|+.+|++|||||||+|||+.++
T Consensus 400 -------------~~~~~~~~~l~~~~l~~~~~-----~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~ 461 (529)
T PRK15134 400 -------------QREQQVIAVMEEVGLDPETR-----HRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQ 461 (529)
T ss_pred -------------HHHHHHHHHHHHcCCCHHHH-----hcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHH
Confidence 0012356789999996 233 344567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHH
Q 000555 363 FQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 363 ~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
..+.+.|++++++.++|||++ +|...++.++||+|++|++|+++.+|+.+++.
T Consensus 462 ~~l~~~l~~~~~~~~~tvi~v-sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 514 (529)
T PRK15134 462 AQILALLKSLQQKHQLAYLFI-SHDLHVVRALCHQVIVLRQGEVVEQGDCERVF 514 (529)
T ss_pred HHHHHHHHHHHHhhCCEEEEE-eCCHHHHHHhcCeEEEEECCEEEEEcCHHHHh
Confidence 999999999987668899886 56667888999999999999999999998874
No 324
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=330.67 Aligned_cols=206 Identities=24% Similarity=0.347 Sum_probs=170.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc----cccceEEEEccCCC-CCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF----HVQRTSAYISQTDN-HIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~~~-~~~ 241 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999876 99999999987542 23567999999863 344
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
..||.||+.|+....+.. .. + ....++++++.+||+...++.
T Consensus 100 ~~~v~~~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~gL~~~~~~~--- 141 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP-----------PE----------E--------------IRERVDESLKKVGMYEYRRHA--- 141 (280)
T ss_pred cccHHHHHHhhHhhcCCC-----------HH----------H--------------HHHHHHHHHHHCCCHhHhhCC---
Confidence 569999999875432210 00 0 012367789999997655544
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.++.+.|||++.|++ .++.. ||++++|
T Consensus 142 --~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~-~~~~~-~d~v~~l 217 (280)
T PRK13633 142 --PHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYM-EEAVE-ADRIIVM 217 (280)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCh-HHHhc-CCEEEEE
Confidence 4579999999999999999999999999999999999999999999998765689999976665 45544 9999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|+++++|+++++..
T Consensus 218 ~~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 218 DSGKVVMEGTPKEIFK 233 (280)
T ss_pred ECCEEEEecCHHHHhc
Confidence 9999999999998753
No 325
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-34 Score=320.56 Aligned_cols=199 Identities=29% Similarity=0.399 Sum_probs=170.2
Q ss_pred eccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc-cccceEEEEccCCCCCCCCCHHHH
Q 000555 854 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS-TFARISGYVEQNDIHSPQVTVEES 932 (1427)
Q Consensus 854 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~ 932 (1427)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999765 3579999999876431 234679999999999999999999
Q ss_pred HHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000555 933 LWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1012 (1427)
Q Consensus 933 l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~ 1012 (1427)
+.+..... ..+..+..+.+.++++.++|.+..++.+ ..||||||||++||+||+++|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1233444556788999999988777765 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1013 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1013 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 899999999975 46778999999986 677777764
No 326
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=321.24 Aligned_cols=211 Identities=23% Similarity=0.344 Sum_probs=175.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++. + ..|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 578899877631 1 138999999999999999999999999999999865 35799999998754
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 907 QS-TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 907 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
.. ..++.++|++|++.+++.+|+.||+.+...... .. .+...+.++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGL--KL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhccccccc--CC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 224579999999999999999999987532111 11 1233556889999999988888776 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999976 46778999999986 688888874
No 327
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=326.11 Aligned_cols=194 Identities=24% Similarity=0.333 Sum_probs=164.7
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHH
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRE 247 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E 247 (1427)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999999875 8999999987632 3567999999988888899999
Q ss_pred HHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCC
Q 000555 248 TFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGV 327 (1427)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 327 (1427)
|+.++.. .. ....++.+++.+||.+..+ +.+..|
T Consensus 101 nl~~~~~--~~---------------------------------------~~~~~~~~l~~~gl~~~~~-----~~~~~L 134 (257)
T PRK11247 101 NVGLGLK--GQ---------------------------------------WRDAALQALAAVGLADRAN-----EWPAAL 134 (257)
T ss_pred HHHhccc--ch---------------------------------------HHHHHHHHHHHcCChhHhc-----CChhhC
Confidence 9987421 00 0012456788899975443 345679
Q ss_pred ChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEE
Q 000555 328 SGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLV 407 (1427)
Q Consensus 328 SGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv 407 (1427)
||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.++.++|+|++.| ...++.++||+|++|++|+++
T Consensus 135 SgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsH-d~~~~~~~~d~i~~l~~G~i~ 213 (257)
T PRK11247 135 SGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTH-DVSEAVAMADRVLLIEEGKIG 213 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987666889988654 455778899999999999999
Q ss_pred EecChH
Q 000555 408 YQGPRA 413 (1427)
Q Consensus 408 ~~G~~~ 413 (1427)
++|+.+
T Consensus 214 ~~~~~~ 219 (257)
T PRK11247 214 LDLTVD 219 (257)
T ss_pred eecccc
Confidence 988754
No 328
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-34 Score=329.22 Aligned_cols=204 Identities=23% Similarity=0.356 Sum_probs=168.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc----cccceEEEEccCCC-CCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF----HVQRTSAYISQTDN-HIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~~~-~~~ 241 (1427)
.++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999875 99999999987542 23567999999874 466
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
..||.||+.|+....+.. .. +....++++++.+||++..++
T Consensus 92 ~~tv~enl~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~gl~~~~~~---- 132 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP-----------PI------------------------EIRKRVDRALAEIGLEKYRHR---- 132 (274)
T ss_pred cchHHHHHHhhHHHcCCC-----------HH------------------------HHHHHHHHHHHHCCCHHHhcC----
Confidence 789999999865432210 00 001235678899999765444
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
.++.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.+ .|+|+|++.|++ .++ ..||++++|
T Consensus 133 -~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~-~~~-~~~d~v~~l 208 (274)
T PRK13644 133 -SPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNL-EEL-HDADRIIVM 208 (274)
T ss_pred -CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCH-HHH-hhCCEEEEE
Confidence 4457999999999999999999999999999999999999999999999865 489999976554 455 679999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+.+++.
T Consensus 209 ~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 209 DRGKIVLEGEPENVL 223 (274)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998875
No 329
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=324.03 Aligned_cols=203 Identities=22% Similarity=0.394 Sum_probs=166.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 36999999999999999999999999999999999999875 899999999875432 34679999999888888
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh-CCcccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL-GLDLCSETVVGN 321 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~~t~vg~ 321 (1427)
+||+||+.++...... .+ . ...++.+++.+ ++.+..+
T Consensus 95 ~tv~~~l~~~~~~~~~----~~-------------------~--------------~~~~~~~l~~~~~l~~~~~----- 132 (237)
T PRK11614 95 MTVEENLAMGGFFAER----DQ-------------------F--------------QERIKWVYELFPRLHERRI----- 132 (237)
T ss_pred CcHHHHHHHhhhccCh----hH-------------------H--------------HHHHHHHHHHHHHHHHHHh-----
Confidence 9999999885321100 00 0 01134455555 3543222
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |...++.++||++++|
T Consensus 133 ~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l 210 (237)
T PRK11614 133 QRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMTIFLVE-QNANQALKLADRGYVL 210 (237)
T ss_pred CchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CcHHHHHhhCCEEEEE
Confidence 24557999999999999999999999999999999999999999999999865 488998865 4556788999999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 211 ENGHVVLEDTGDALL 225 (237)
T ss_pred eCCEEEeeCCHHHHh
Confidence 999999999998874
No 330
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.9e-34 Score=327.27 Aligned_cols=223 Identities=21% Similarity=0.296 Sum_probs=178.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++++..+.. +...+.+++|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 789999987742110 000112469999999999999999999999999999999999865 35799999998764
Q ss_pred cc---cccceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000555 907 QS---TFARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~---~~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 980 (1427)
.. ..++.++|++|++. +++.+|+.|++.+...... .....+..+.++++++.++|. +..+..+ ..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhcC
Confidence 21 22456999999874 5688899999987654331 123334455688999999994 5555544 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999986 56677999999986 6777
Q ss_pred EccCC
Q 000555 1060 YGGKL 1064 (1427)
Q Consensus 1060 ~~g~~ 1064 (1427)
..|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 77764
No 331
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.3e-34 Score=340.58 Aligned_cols=200 Identities=27% Similarity=0.429 Sum_probs=169.6
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCCCCCCCC
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 244 (1427)
|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999876 89999999987432 23567999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.|+.+.... . ....+++++++.+||++..+. .+
T Consensus 92 v~enl~~~~~~~~~-------------~------------------------~~~~~~~~~l~~~gL~~~~~~-----~~ 129 (354)
T TIGR02142 92 VRGNLRYGMKRARP-------------S------------------------ERRISFERVIELLGIGHLLGR-----LP 129 (354)
T ss_pred HHHHHHHHhhccCh-------------h------------------------HHHHHHHHHHHHcCChhHhcC-----Ch
Confidence 99999986432100 0 001235678999999764444 45
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++.++.++|+|++.| ...++.+++|+|++|++|
T Consensus 130 ~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH-~~~~~~~~~d~i~~l~~G 208 (354)
T TIGR02142 130 GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSH-SLQEVLRLADRVVVLEDG 208 (354)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEec-CHHHHHHhCCEEEEEeCC
Confidence 6799999999999999999999999999999999999999999999997766889988755 456788999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
+++..|+++++..
T Consensus 209 ~i~~~g~~~~~~~ 221 (354)
T TIGR02142 209 RVAAAGPIAEVWA 221 (354)
T ss_pred EEEEECCHHHHhc
Confidence 9999999988753
No 332
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=326.53 Aligned_cols=206 Identities=30% Similarity=0.471 Sum_probs=169.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999875 89999999887542 2346799999998887889
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.++....... .. .....++++++.+||++..++ .
T Consensus 92 tv~e~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~ 131 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS-----------RA------------------------EDDALVAAALAQVDLAHLAGR-----D 131 (258)
T ss_pred CHHHHHHhhhcccCCC-----------cH------------------------HHHHHHHHHHHHcCCHhHhcC-----C
Confidence 9999998853211100 00 001135678889999754444 4
Q ss_pred CCCCChHHhHHHHHHHHHh------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 324 IRGVSGGQKKRVTTGEMIV------GPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~------~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
+..|||||||||+||++|+ .+|++++|||||+|||+.+...+.+.|+++.++.++|||++.| ...++.++||+
T Consensus 132 ~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH-~~~~~~~~~d~ 210 (258)
T PRK13548 132 YPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLH-DLNLAARYADR 210 (258)
T ss_pred cccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEEC-CHHHHHHhcCE
Confidence 5579999999999999999 5999999999999999999999999999987456889988754 45677889999
Q ss_pred EEEEeCCeEEEecChHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~ 416 (1427)
|++|++|++++.|+.+++.
T Consensus 211 i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 211 IVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEEECCEEEeeCCHHHHh
Confidence 9999999999999988764
No 333
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=330.27 Aligned_cols=205 Identities=23% Similarity=0.366 Sum_probs=170.4
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPEL 243 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~l 243 (1427)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999999876 99999999987542 23467999999863 34568
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||.||+.++....+.. .. .....++++++.+||.+..++.
T Consensus 95 tv~~~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~~----- 134 (277)
T PRK13652 95 TVEQDIAFGPINLGLD-----------EE------------------------TVAHRVSSALHMLGLEELRDRV----- 134 (277)
T ss_pred cHHHHHHhHHHHcCCC-----------HH------------------------HHHHHHHHHHHHCCChhHhcCC-----
Confidence 9999998865432210 00 0012356789999997654444
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
++.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ .+++.+.||++++|++
T Consensus 135 ~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~-~~~~~~~~drv~~l~~ 213 (277)
T PRK13652 135 PHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQ-LDLVPEMADYIYVMDK 213 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999876558899987554 5678899999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+++++.
T Consensus 214 G~i~~~g~~~~~~ 226 (277)
T PRK13652 214 GRIVAYGTVEEIF 226 (277)
T ss_pred CeEEEECCHHHHh
Confidence 9999999999875
No 334
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.5e-34 Score=327.42 Aligned_cols=208 Identities=23% Similarity=0.338 Sum_probs=170.2
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCC--
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTD-- 237 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~-- 237 (1427)
.+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|+++|+++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999875 999999999875431 345799999986
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-cccc
Q 000555 238 NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSE 316 (1427)
Q Consensus 238 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~ 316 (1427)
.+++.+||+||+.+....... ... .....+++++++.+||+ ...
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~----------~~~------------------------~~~~~~~~~~l~~~gl~~~~~- 144 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS----------LDE------------------------SEQKARIAELLDMVGLRSEDA- 144 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC----------CCH------------------------HHHHHHHHHHHHHcCCChhhh-
Confidence 466789999999875432100 000 00012356788999995 333
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
+..++.|||||||||+|||||+.+|+++||||||+|||+.+...+.+.|+++.++.++|+|++.| ....+.++||
T Consensus 145 ----~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH-~~~~~~~~~d 219 (265)
T TIGR02769 145 ----DKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITH-DLRLVQSFCQ 219 (265)
T ss_pred ----hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeC-CHHHHHHHhc
Confidence 34456799999999999999999999999999999999999999999999987655889988754 4567778999
Q ss_pred cEEEEeCCeEEEecChHHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~ 416 (1427)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 220 RVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEEeCCEEEEECCHHHHc
Confidence 99999999999999998875
No 335
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=323.84 Aligned_cols=215 Identities=26% Similarity=0.304 Sum_probs=173.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... + ...+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 478999987663 2458999999999999999999999999999999999632 2 12479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 234567999999988887 899999988653321 1122333456788888888743 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 689999999975 5778899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |++++.|+.
T Consensus 222 ~-G~i~~~g~~ 231 (252)
T PRK14239 222 D-GDLIEYNDT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 677787764
No 336
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.3e-34 Score=321.82 Aligned_cols=201 Identities=27% Similarity=0.347 Sum_probs=162.4
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc------cccceEEEEccCC--CC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF------HVQRTSAYISQTD--NH 239 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~------~~~~~~~yv~Q~~--~~ 239 (1427)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999875 99999999987542 2356799999997 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-cccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSETV 318 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~ 318 (1427)
++.+||+||+.+.....+.. .. .+. .....+++++.++|. ...
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~--~~--------~~~-----------------------~~~~~~~~l~~~~l~~~~~--- 139 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKL--SK--------KEA-----------------------RKEAVLLLLVGVGLPEEVL--- 139 (228)
T ss_pred CCcCCHHHHHHHHHHhccCC--cH--------HHH-----------------------HHHHHHHHHHHCCCChhHh---
Confidence 67899999998865432210 00 000 000124577888884 222
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|++++++.++|||++.|+ ..++.++||++
T Consensus 140 --~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~i 216 (228)
T cd03257 140 --NRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHD-LGVVAKIADRV 216 (228)
T ss_pred --hCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCeE
Confidence 344567999999999999999999999999999999999999999999999876558899987655 45777899999
Q ss_pred EEEeCCeEEEec
Q 000555 399 LLLSEGHLVYQG 410 (1427)
Q Consensus 399 ilL~~G~iv~~G 410 (1427)
++|++|+++..|
T Consensus 217 ~~l~~G~i~~~g 228 (228)
T cd03257 217 AVMYAGKIVEEG 228 (228)
T ss_pred EEEeCCEEEecC
Confidence 999999998765
No 337
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.8e-34 Score=319.14 Aligned_cols=194 Identities=24% Similarity=0.389 Sum_probs=161.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 36999999999999999999999999999999999999875 999999999875431 346799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.++....+.. .. ..+..++++++.+||++..++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 133 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK-----------ER------------------------EIQRRVGAALRQVGLEHKADA--- 133 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC-----------HH------------------------HHHHHHHHHHHHcCChhhhhC---
Confidence 8999999999875432210 00 001135678889999754333
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|+ ..++.++||++++
T Consensus 134 --~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~-~~~~~~~~d~i~~ 209 (214)
T TIGR02673 134 --FPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHD-LSLVDRVAHRVII 209 (214)
T ss_pred --ChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhcCEEEE
Confidence 3457999999999999999999999999999999999999999999999865 48899887555 5678889999999
Q ss_pred EeCCe
Q 000555 401 LSEGH 405 (1427)
Q Consensus 401 L~~G~ 405 (1427)
|++|+
T Consensus 210 l~~G~ 214 (214)
T TIGR02673 210 LDDGR 214 (214)
T ss_pred ecCCC
Confidence 99985
No 338
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=324.98 Aligned_cols=215 Identities=22% Similarity=0.316 Sum_probs=174.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--Cc-eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 902 (1427)
.++++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 479999987653 2458999999999999999999999999999999999753 11 1479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL----RDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 973 (1427)
.+... ...++.+||++|++.+++. ||+||+.+..... ....+++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIH--GTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87632 2345679999999888875 9999998764332 111233444567888999888532 2333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..+||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 358999999999999999999999999999999999999999999999865 799999999976 5677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 229 ~-G~i~~~g~~ 238 (259)
T PRK14274 229 M-GELVECNDT 238 (259)
T ss_pred C-CEEEEECCH
Confidence 6 688887764
No 339
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-34 Score=323.23 Aligned_cols=215 Identities=24% Similarity=0.275 Sum_probs=174.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
-++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 478999987652 245899999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ...++.++|++|++.+++ .|++||+.|...... .....+..+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 133567999999998887 899999988654321 1123344456788999998742 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
...||+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 358999999999999999999999999999999999999999999999876 689999999975 5678899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 6 677777764
No 340
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.3e-34 Score=370.46 Aligned_cols=205 Identities=26% Similarity=0.368 Sum_probs=167.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++++|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++.. .++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46999999999999999999999999999999999999986 999999999987653 5788999999987665 5
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++.. . . ++++.+..+.+ ..++.++ .+++..||.+|+.+
T Consensus 542 TI~eNi~~~~~---~--~-------------------~e~i~~al~~a---------~l~~~i~--~lp~G~dt~ige~G 586 (686)
T TIGR03797 542 SIFENIAGGAP---L--T-------------------LDEAWEAARMA---------GLAEDIR--AMPMGMHTVISEGG 586 (686)
T ss_pred cHHHHHhcCCC---C--C-------------------HHHHHHHHHHc---------CcHHHHH--hccccccccccCCC
Confidence 99999988521 0 0 01111111110 0111222 34567899999876
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
.+||||||||++||||++++|+|++||||||+||+.++.++.+.|+++ ++|+|++.|++ +..+.||+|++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~ 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDA 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999875 47888876765 66788999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++++|+++++.+
T Consensus 660 G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 660 GRVVQQGTYDELMA 673 (686)
T ss_pred CEEEEECCHHHHHh
Confidence 99999999999864
No 341
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.6e-34 Score=325.28 Aligned_cols=206 Identities=26% Similarity=0.374 Sum_probs=171.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc----------------cccceE
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF----------------HVQRTS 230 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 230 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999999875 99999999887431 235679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHh-cCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh
Q 000555 231 AYISQTDNHIPELTVRETFDFAARW-QGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL 309 (1427)
Q Consensus 231 ~yv~Q~~~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l 309 (1427)
+|++|++.+++..||+||+.++... .+.. .. + ....++++++.+
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~ 134 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA-----------RA----------E--------------AEKRAMELLDMV 134 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC-----------HH----------H--------------HHHHHHHHHHHc
Confidence 9999999888899999999885321 1100 00 0 011356788899
Q ss_pred CCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCch
Q 000555 310 GLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPP 389 (1427)
Q Consensus 310 gL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~ 389 (1427)
|+++..+ +.+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++.++|+|++.|+ .+
T Consensus 135 gl~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~-~~ 208 (252)
T TIGR03005 135 GLADKAD-----HMPAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHE-MG 208 (252)
T ss_pred CChhHhh-----cChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCC-HH
Confidence 9975443 34567999999999999999999999999999999999999999999999876568899987554 56
Q ss_pred hHHhhcCcEEEEeCCeEEEecChHHHH
Q 000555 390 ETFDLFDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 390 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
++.+++|++++|++|++++.|+.+++.
T Consensus 209 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 209 FAREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 778899999999999999999988774
No 342
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.8e-34 Score=322.04 Aligned_cols=202 Identities=26% Similarity=0.327 Sum_probs=164.9
Q ss_pred eeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHHHHH
Q 000555 170 LNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVRETF 249 (1427)
Q Consensus 170 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~E~l 249 (1427)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999875 9999999998754322 248999999889999999999
Q ss_pred HHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCCh
Q 000555 250 DFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSG 329 (1427)
Q Consensus 250 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSG 329 (1427)
.++...... + .... .....++++++.+||++..++ .+..|||
T Consensus 76 ~~~~~~~~~--~-------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LSg 117 (230)
T TIGR01184 76 ALAVDRVLP--D-------LSKS------------------------ERRAIVEEHIALVGLTEAADK-----RPGQLSG 117 (230)
T ss_pred HHHHHhccc--C-------CCHH------------------------HHHHHHHHHHHHcCCHHHHcC-----ChhhCCH
Confidence 886321000 0 0000 001135678889999754444 3456999
Q ss_pred HHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEe
Q 000555 330 GQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQ 409 (1427)
Q Consensus 330 GqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~ 409 (1427)
||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.++||++++|++|+++..
T Consensus 118 G~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~-~~~~~~~~d~v~~l~~G~i~~~ 196 (230)
T TIGR01184 118 GMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHD-VDEALLLSDRVVMLTNGPAANI 196 (230)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhcCEEEEEeCCcEecc
Confidence 999999999999999999999999999999999999999999877668899987554 5678899999999999999998
Q ss_pred cChHHH
Q 000555 410 GPRAEV 415 (1427)
Q Consensus 410 G~~~~~ 415 (1427)
|+..++
T Consensus 197 ~~~~~~ 202 (230)
T TIGR01184 197 GQILEV 202 (230)
T ss_pred cCceec
Confidence 865543
No 343
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=333.92 Aligned_cols=223 Identities=16% Similarity=0.220 Sum_probs=177.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--ceeEEEEEECCc
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--GYIEGDIKISGY 903 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~ 903 (1427)
.++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|.... ....|+|.++|.
T Consensus 3 ~L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~ 73 (330)
T PRK15093 3 LLDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDI 73 (330)
T ss_pred eEEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCE
Confidence 37889998776421 1235699999999999999999999999999999999997542 235799999998
Q ss_pred cCCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcC---CCHHHHHHHHHHHHHHcCCccc---cc
Q 000555 904 PKEQS---T----FARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKE---VSKNQRHEFVEEVMRLVELDSL---RD 968 (1427)
Q Consensus 904 ~~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~ 968 (1427)
++... . .++.++||+|++. +.|.+||.+++........... ....+..+.+.++++.++|.+. .+
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~ 153 (330)
T PRK15093 74 DLLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMR 153 (330)
T ss_pred ECCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHh
Confidence 76421 1 1346999999975 6789999999976422110000 1113345678899999999753 23
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhc
Q 000555 969 ALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFD 1047 (1427)
Q Consensus 969 ~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D 1047 (1427)
... ..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||+|||+++ .+.+.+|
T Consensus 154 ~~p-----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~d 227 (330)
T PRK15093 154 SFP-----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWAD 227 (330)
T ss_pred CCc-----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCC
Confidence 333 589999999999999999999999999999999999999999999999874 899999999975 4667899
Q ss_pred eEEEEecCcEEEEccCC
Q 000555 1048 ELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1048 ~v~~l~~gg~~~~~g~~ 1064 (1427)
++++|.+ |++++.|+.
T Consensus 228 ri~vm~~-G~ive~g~~ 243 (330)
T PRK15093 228 KINVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEEC-CEEEEECCH
Confidence 9999986 688888875
No 344
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-34 Score=322.57 Aligned_cols=215 Identities=23% Similarity=0.323 Sum_probs=173.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++++|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899987653 23589999999999999999999999999999999996431 12479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ...++.++|++|++.+++ .|++||+.+....+. ..+.++..+.++++++.+++.+ ..+..+
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 144 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKSA-- 144 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcCC--
Confidence 87642 234567999999988887 899999998654321 1123344566788888888742 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. .+.+.+|++++|+
T Consensus 145 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 145 ---LGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred ---CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 5799999999999999999999999999999999999999999999985 4799999999975 4777899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 6 577777753
No 345
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.8e-34 Score=316.68 Aligned_cols=209 Identities=26% Similarity=0.421 Sum_probs=175.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+... .+.+.+|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5788888765310 112569999999999999999999999999999999999765 35799999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 907 QS------TFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
.. .+++.++|++|++.+++..|+.||+.+...... ....++..+.++++++.++|.+..+..+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 245679999999999999999999998754321 1234445567899999999987777765 5899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ..+.+|++++|++|
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~g 217 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999876 5899999999974 46789999999864
No 346
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.7e-34 Score=338.52 Aligned_cols=194 Identities=25% Similarity=0.400 Sum_probs=168.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 000555 857 NVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 857 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999865 357999999987532 1245679999999999999999
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
+||+.|+.... ...+..+.++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999875321 12334556889999999998888765 489999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|+.++..+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999986 57778999999986 678888764
No 347
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.4e-34 Score=321.74 Aligned_cols=201 Identities=24% Similarity=0.335 Sum_probs=166.0
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--cccceEEEEc-cCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--HVQRTSAYIS-QTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~~~~~~~ 242 (1427)
.+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 457999999999999999999999999999999999999875 99999999875332 2356799998 55667788
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.+.....+... .+ ....++.+++.+||++..++.+
T Consensus 110 ~tv~e~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~--- 151 (236)
T cd03267 110 LPVIDSFYLLAAIYDLPP-----------AR------------------------FKKRLDELSELLDLEELLDTPV--- 151 (236)
T ss_pred CcHHHHHHHHHHHcCCCH-----------HH------------------------HHHHHHHHHHHcCChhHhcCCh---
Confidence 999999988654332100 00 0112566888899987666654
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ ..++.++||++++|+
T Consensus 152 --~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~-~~~~~~~~d~i~~l~ 228 (236)
T cd03267 152 --RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHY-MKDIEALARRVLVID 228 (236)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecC-HHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999877668899987555 457788999999999
Q ss_pred CCeEEEec
Q 000555 403 EGHLVYQG 410 (1427)
Q Consensus 403 ~G~iv~~G 410 (1427)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 348
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=324.05 Aligned_cols=216 Identities=23% Similarity=0.306 Sum_probs=176.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc-e--eEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG-Y--IEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+.. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478999987663 235899999999999999999999999999999999975421 2 479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ..++.+..+.++++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654321 1223334456788889888842 33333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 358999999999999999999999999999999999999999999999865 699999999986 5778899999997
Q ss_pred c----CcEEEEccCC
Q 000555 1054 R----GGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~----gg~~~~~g~~ 1064 (1427)
+ .|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4788888875
No 349
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=323.11 Aligned_cols=219 Identities=21% Similarity=0.316 Sum_probs=173.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--Cc-eeEEEEEECCc
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISGY 903 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g~ 903 (1427)
-+++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 46788877652 2468999999999999999999999999999999999753 11 25799999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000555 904 PKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSG 978 (1427)
Q Consensus 904 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 978 (1427)
+... ..+++.++|++|++.+++. |++||+.+....+. ......+.++.++++++.+++.+....... ..+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLK-DSAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhh-cChhh
Confidence 7532 1346679999999888885 99999988643321 111223344567889999998652211111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999976 56778999999986 678
Q ss_pred EEccCC
Q 000555 1059 IYGGKL 1064 (1427)
Q Consensus 1059 ~~~g~~ 1064 (1427)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 777764
No 350
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=337.70 Aligned_cols=190 Identities=24% Similarity=0.380 Sum_probs=166.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 000555 857 NVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 857 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|+..++|++||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999865 357999999987532 1245679999999999999999
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
+||+.|... ....+.++++++.++|.+..+..+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988632 112345789999999988877765 589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999985 57888999999986 678888875
No 351
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=327.36 Aligned_cols=205 Identities=21% Similarity=0.281 Sum_probs=169.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. +++.
T Consensus 22 ~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (269)
T PRK13648 22 SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVG 98 (269)
T ss_pred CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhccc
Confidence 35899999999999999999999999999999999999875 99999999987542 24567999999974 6788
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.|+++|+.|.....+.. .. + ....++.+++.+||.+..+ .
T Consensus 99 ~~v~~~~~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~~~-----~ 138 (269)
T PRK13648 99 SIVKYDVAFGLENHAVP-----------YD----------E--------------MHRRVSEALKQVDMLERAD-----Y 138 (269)
T ss_pred ccHHHHHHhhHHhcCCC-----------HH----------H--------------HHHHHHHHHHHcCCchhhh-----C
Confidence 89999998865432110 00 0 0113567889999975444 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|++ .++. .+|+|++|+
T Consensus 139 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~-~~~~-~~d~i~~l~ 216 (269)
T PRK13648 139 EPNALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDL-SEAM-EADHVIVMN 216 (269)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCc-hHHh-cCCEEEEEE
Confidence 45679999999999999999999999999999999999999999999998765588999976665 4555 499999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|++++.|+++++.
T Consensus 217 ~G~i~~~g~~~~~~ 230 (269)
T PRK13648 217 KGTVYKEGTPTEIF 230 (269)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998874
No 352
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.1e-34 Score=323.92 Aligned_cols=210 Identities=22% Similarity=0.358 Sum_probs=168.1
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1427)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ .+.+|+|+++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5999999999999999999999999999999999999753 12389999999987531 2356799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+ .||+||+.++.+..+... ..+ ....++.+++.+||...... .-
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-~~ 138 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD----------KKE------------------------LDEIVEESLKKAALWDEVKD-RL 138 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC----------HHH------------------------HHHHHHHHHHHcCCCcchhh-Hh
Confidence 8 999999998754322100 000 01135678888998621100 11
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+..+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.| ...++.+++|++++
T Consensus 139 ~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH-~~~~~~~~~d~i~~ 215 (247)
T TIGR00972 139 HDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTH-NMQQAARISDRTAF 215 (247)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEec-CHHHHHHhCCEEEE
Confidence 344567999999999999999999999999999999999999999999999865 478888655 45678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|+++++|+++++.
T Consensus 216 l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 216 FYDGELVEYGPTEQIF 231 (247)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 353
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-34 Score=315.56 Aligned_cols=191 Identities=27% Similarity=0.390 Sum_probs=162.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 000555 857 NVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 857 ~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
|+|+++++ |+++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999865 357999999987531 1235679999999999999999
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
+||+.+..... ......+.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 22334456888999999987666654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 1010 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|+.+...+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999975 46678999999986 5666544
No 354
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.7e-34 Score=320.10 Aligned_cols=288 Identities=23% Similarity=0.350 Sum_probs=229.6
Q ss_pred CCCcceeeecccccch-hhhHHHHHHhhhcCccCHHHHHHH-----HHHHHh--hcCCCCC-----ccEEEEeeeEEEEE
Q 000555 65 GGEAKTETIDVRKLNR-SRRELVVSKALATNDQDNYKLLSA-----IKERLD--RVGIEVP-----KVEVRFQNLKVVAD 131 (1427)
Q Consensus 65 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~p-----~~~v~~~~l~~~~~ 131 (1427)
|..+..++||..=.-. +||+.+|.+|..+-.++.+++|.. -+..++ --|-+.| .+-+.-+|++|.-.
T Consensus 208 gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~lF~~PqHpYTr~Ll~aeP~g~~~p~~~~~~~ll~~~~v~v~f~ 287 (534)
T COG4172 208 GMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTETLFAAPQHPYTRKLLAAEPSGDPPPLPEDAPVLLEVEDLRVWFP 287 (534)
T ss_pred CcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHHHhhCCCChHHHHHHhcCCCCCCCCCCCCCCceEEecceEEEEe
Confidence 3444557788776665 999999999999999999988832 122333 2333333 23455677776654
Q ss_pred EecCCCcCCchhHHhHHHHHHHhhhccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCce
Q 000555 132 VQTGSRALPTLVNATRDVFERILTGLRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKS 211 (1427)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~ 211 (1427)
...| +.++......++++||+++++||.++|+|.||||||||=.+|.+++++ +
T Consensus 288 i~~g-----------------------~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s----~ 340 (534)
T COG4172 288 IKGG-----------------------FLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS----Q 340 (534)
T ss_pred cCCc-----------------------cccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc----C
Confidence 4321 122233457899999999999999999999999999999999999876 6
Q ss_pred eEEEECCeecCccc------ccceEEEEccCC--CCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChh
Q 000555 212 GNITYNGYKLDEFH------VQRTSAYISQTD--NHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPE 283 (1427)
Q Consensus 212 G~V~~~G~~~~~~~------~~~~~~yv~Q~~--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1427)
|+|.++|++++... .++.+-.|+|+| .+-|.+||.+-|.-+.+...+. +++.|
T Consensus 341 G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~---------ls~~e---------- 401 (534)
T COG4172 341 GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPK---------LSAAE---------- 401 (534)
T ss_pred ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCC---------CCHHH----------
Confidence 99999999987542 467889999997 4789999999998887665431 11111
Q ss_pred HHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHH
Q 000555 284 IDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTF 363 (1427)
Q Consensus 284 ~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~ 363 (1427)
...++.++|+..||+. ...++++.+.|||||||++||||++.+|++++||||||+||-+...
T Consensus 402 --------------R~~rv~~aL~EVGLDp----~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQa 463 (534)
T COG4172 402 --------------RDQRVIEALEEVGLDP----ATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQA 463 (534)
T ss_pred --------------HHHHHHHHHHHcCCCh----hHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHH
Confidence 1235778899999975 3457888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 364 QIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 364 ~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
+|+++|+++-++++.+-++ |.|+..-+-.+||+|+||.+|+||++|+.+++.+
T Consensus 464 Qvv~LLr~LQ~k~~LsYLF-ISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~ 516 (534)
T COG4172 464 QVLDLLRDLQQKHGLSYLF-ISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFA 516 (534)
T ss_pred HHHHHHHHHHHHhCCeEEE-EeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhc
Confidence 9999999999999999988 5788888889999999999999999999999864
No 355
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=333.35 Aligned_cols=218 Identities=17% Similarity=0.206 Sum_probs=172.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-CCceeEEEECCeecCcccc-------cceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS-LKKSGNITYNGYKLDEFHV-------QRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~ 238 (1427)
..+|+|||++|++||+++|+|+||||||||+++|+|++++. ...+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 56999999999999999999999999999999999998642 1348999999998754321 247999999875
Q ss_pred --CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 239 --HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 239 --~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
+.+.+||.+++.+........ +. .. .+. . +...++.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~-~~--~~---~~~---------~--------------~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYK-GR--WW---QRF---------G--------------WRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcc-cc--cc---ccH---------H--------------HHHHHHHHHHHHCCCCChHH
Confidence 578899999997643211000 00 00 000 0 00123677899999974211
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
..++.+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.++.|.|+|++ +|....+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~i-tHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLI-SHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEE-ECCHHHHHHhCC
Confidence 23456678999999999999999999999999999999999999999999999977668999986 566778889999
Q ss_pred cEEEEeCCeEEEecChHHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998875
No 356
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.9e-34 Score=370.45 Aligned_cols=207 Identities=25% Similarity=0.394 Sum_probs=165.0
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~ 242 (1427)
++++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++.. .++.++||+|++.+|.
T Consensus 493 ~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~- 568 (711)
T TIGR00958 493 DVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS- 568 (711)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-
Confidence 457999999999999999999999999999999999999986 999999999987643 5688999999987665
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.|+||||.++... . . +.++.+..+.+. .++.++ .+++..||.+|+.
T Consensus 569 gTIreNI~~g~~~--~---~------------------~e~i~~al~~a~---------l~~~i~--~lp~GldT~ige~ 614 (711)
T TIGR00958 569 GSVRENIAYGLTD--T---P------------------DEEIMAAAKAAN---------AHDFIM--EFPNGYDTEVGEK 614 (711)
T ss_pred cCHHHHHhcCCCC--C---C------------------HHHHHHHHHHcC---------CHHHHH--hCCCccCCcccCC
Confidence 6999999885210 0 0 001111111100 111222 2456688999987
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
+. .||||||||++||||++++|+|++||||||+||+.++..+.+ .. ...++|+|++.|++ ++.+.+|+|++|+
T Consensus 615 G~-~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~---~~~~~TvIiItHrl--~~i~~aD~IivL~ 687 (711)
T TIGR00958 615 GS-QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR---SRASRTVLLIAHRL--STVERADQILVLK 687 (711)
T ss_pred CC-cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh---ccCCCeEEEEeccH--HHHHhCCEEEEEE
Confidence 54 699999999999999999999999999999999999998888 22 22478998876665 5678899999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|+++++|+++++.+
T Consensus 688 ~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 688 KGSVVEMGTHKQLME 702 (711)
T ss_pred CCEEEEeeCHHHHHh
Confidence 999999999999875
No 357
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=329.01 Aligned_cols=209 Identities=26% Similarity=0.340 Sum_probs=170.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|.++|+...+|+|+++|.++... ..++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 3599999999999999999999999999999999999987511239999999988542 23467999999974 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.||+||+.|..+..+.. ..+ ...+++.+++.+||++.. +.
T Consensus 100 ~tv~enl~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~L~~~~-----~~ 139 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP-----------RPE------------------------MIKIVRDVLADVGMLDYI-----DS 139 (282)
T ss_pred CCHHHHHHhhHHhCCCC-----------HHH------------------------HHHHHHHHHHHCCChhHh-----cC
Confidence 99999998864332210 000 012356788999997544 34
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++.|+|||++.|++ .++ ..||++++|+
T Consensus 140 ~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~-~~~d~i~~l~ 217 (282)
T PRK13640 140 EPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDI-DEA-NMADQVLVLD 217 (282)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEE
Confidence 45679999999999999999999999999999999999999999999998765688999986665 445 5899999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|++++.|+++++..
T Consensus 218 ~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 218 DGKLLAQGSPVEIFS 232 (282)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988753
No 358
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.5e-34 Score=361.82 Aligned_cols=209 Identities=26% Similarity=0.422 Sum_probs=170.1
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~ 242 (1427)
++++|+|+|++++|||.+||+||||||||||++.|.|.++|. +|+|.+||+++++. .+++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 357999999999999999999999999999999999999985 99999999998765 46789999999987776
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.||+|||.++..- . .++++.+..+.+ ..++.+.. |+++.||.+|++
T Consensus 417 ~TI~~NI~~g~~~-----a------------------t~eei~~a~k~a---------~~~d~I~~--lp~g~dt~vge~ 462 (567)
T COG1132 417 GTIRENIALGRPD-----A------------------TDEEIEEALKLA---------NAHEFIAN--LPDGYDTIVGER 462 (567)
T ss_pred ccHHHHHhcCCCC-----C------------------CHHHHHHHHHHh---------ChHHHHHh--CcccccceecCC
Confidence 7999999996310 0 001111111111 12222333 466789999976
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
+. .||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++..|++ .+...+|+|++|+
T Consensus 463 G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHRl--sti~~aD~IiVl~ 537 (567)
T COG1132 463 GV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHRL--STIKNADRIIVLD 537 (567)
T ss_pred Cc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEeccH--hHHHhCCEEEEEE
Confidence 65 5999999999999999999999999999999999999999999998763 57877755554 4555699999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|++++.|+++++..
T Consensus 538 ~G~i~e~G~h~eLl~ 552 (567)
T COG1132 538 NGRIVERGTHEELLA 552 (567)
T ss_pred CCEEEEecCHHHHHH
Confidence 999999999999975
No 359
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.2e-34 Score=319.43 Aligned_cols=198 Identities=29% Similarity=0.385 Sum_probs=163.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccc-------cceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHV-------QRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999876 9999999998754321 2579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||.||+.+.....+.. . + ....+++++++.+||.+..+.
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~-----------~----------~--------------~~~~~~~~~l~~~~l~~~~~~-- 142 (228)
T PRK10584 100 IPTLNALENVELPALLRGES-----------S----------R--------------QSRNGAKALLEQLGLGKRLDH-- 142 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC-----------H----------H--------------HHHHHHHHHHHHcCCHhHhhC--
Confidence 89999999998864332110 0 0 001235678899999754443
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++.++|||++.|++ .++ +.+|+++
T Consensus 143 ---~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~-~~~d~i~ 217 (228)
T PRK10584 143 ---LPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDL-QLA-ARCDRRL 217 (228)
T ss_pred ---ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEE
Confidence 34579999999999999999999999999999999999999999999998766688999876665 455 5699999
Q ss_pred EEeCCeEEEe
Q 000555 400 LLSEGHLVYQ 409 (1427)
Q Consensus 400 lL~~G~iv~~ 409 (1427)
+|++|+++++
T Consensus 218 ~l~~g~i~~~ 227 (228)
T PRK10584 218 RLVNGQLQEE 227 (228)
T ss_pred EEECCEEEec
Confidence 9999999753
No 360
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-34 Score=325.00 Aligned_cols=221 Identities=20% Similarity=0.276 Sum_probs=171.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .+..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 46999999999999999999999999999999999999875 999999999875432 13458999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++....... +........ ....+. ..+....++..++.+||+... ++
T Consensus 95 ~tv~enl~~~~~~~~~~----~~~~~~~~~---~~~~~~-------------~~~~~~~~~~~l~~~gl~~~~-----~~ 149 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT----GLFSGLLKT---PAFRRA-------------ESEALDRAATWLERVGLLEHA-----NR 149 (255)
T ss_pred CcHHHHHHHhhhccccc----hhhhhhccc---cccccc-------------hhHHHHHHHHHHHhCChhhhh-----hC
Confidence 99999999864311000 000000000 000000 000112356778889987533 34
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.++.++|||++.| ...++.++||++++|+
T Consensus 150 ~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH-~~~~~~~~~d~i~~l~ 228 (255)
T PRK11300 150 QAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEH-DMKLVMGISDRIYVVN 228 (255)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeC-CHHHHHHhCCEEEEEE
Confidence 456799999999999999999999999999999999999999999999987655889998755 4567889999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|++++.|+.+++.
T Consensus 229 ~g~i~~~~~~~~~~ 242 (255)
T PRK11300 229 QGTPLANGTPEEIR 242 (255)
T ss_pred CCeEEecCCHHHHh
Confidence 99999999988764
No 361
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=324.69 Aligned_cols=206 Identities=20% Similarity=0.256 Sum_probs=169.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc----------------ccccceE
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE----------------FHVQRTS 230 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------~~~~~~~ 230 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ...++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 46999999999999999999999999999999999999875 8999999987742 1234679
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHH-hcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh
Q 000555 231 AYISQTDNHIPELTVRETFDFAAR-WQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL 309 (1427)
Q Consensus 231 ~yv~Q~~~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l 309 (1427)
+|++|++.+++.+||+||+.++.. ..... . + ....++.++++.+
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-----------~----------~--------------~~~~~~~~~l~~~ 139 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-----------K----------Q--------------EARERAVKYLAKV 139 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-----------H----------H--------------HHHHHHHHHHHHc
Confidence 999999988888999999987532 11110 0 0 0012356788999
Q ss_pred CCccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCch
Q 000555 310 GLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPP 389 (1427)
Q Consensus 310 gL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~ 389 (1427)
||.+.. .++.++.|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.+ .|+|+|++.| ...
T Consensus 140 gl~~~~----~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsH-~~~ 213 (257)
T PRK10619 140 GIDERA----QGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTH-EMG 213 (257)
T ss_pred CCChhh----hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeC-CHH
Confidence 996432 2345668999999999999999999999999999999999999999999999865 4899988755 456
Q ss_pred hHHhhcCcEEEEeCCeEEEecChHHHH
Q 000555 390 ETFDLFDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 390 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
++.++||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 777899999999999999999988764
No 362
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-34 Score=326.45 Aligned_cols=216 Identities=25% Similarity=0.345 Sum_probs=179.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++. .....+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 4789999887631 012358999999999999999999999999999999999865 3579999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDI-HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234667999999974 577889999998764321 2234444567889999999988777765 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999763 4 46999999986 57777
Q ss_pred ccCC
Q 000555 1061 GGKL 1064 (1427)
Q Consensus 1061 ~g~~ 1064 (1427)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 7764
No 363
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.49 Aligned_cols=215 Identities=26% Similarity=0.356 Sum_probs=174.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g 69 (250)
T PRK14262 3 IIEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKG 69 (250)
T ss_pred eEEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 378999987652 246899999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc----ccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL----RDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 973 (1427)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.+++.++.+++.+. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 143 (250)
T PRK14262 70 QDIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP--- 143 (250)
T ss_pred EEcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87542 134567999999998887 899999988653321 11233344567888898888542 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..+||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 144 --~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~ 219 (250)
T PRK14262 144 --GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMY 219 (250)
T ss_pred --hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 358999999999999999999999999999999999999999999999865 799999999975 4778899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 220 ~-G~i~~~g~~ 229 (250)
T PRK14262 220 R-GELIEYGPT 229 (250)
T ss_pred C-CEEEEecCH
Confidence 6 577777764
No 364
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-34 Score=328.36 Aligned_cols=206 Identities=21% Similarity=0.305 Sum_probs=167.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCC-
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDN- 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~- 238 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999875 99999999987532 23467999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
.+...||+||+.|.....+.. .. + ....++++++.+||...
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~---- 137 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS-----------QE----------E--------------AEALAREKLALVGISES---- 137 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCCChh----
Confidence 333479999999865432110 00 0 01125667888898631
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
..+..++.|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.+ .++|||++.|+ ..++.++||++
T Consensus 138 ~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH~-~~~~~~~~d~i 215 (280)
T PRK13649 138 LFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTHL-MDDVANYADFV 215 (280)
T ss_pred hhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecc-HHHHHHhCCEE
Confidence 12344567999999999999999999999999999999999999999999999865 48899987655 45778899999
Q ss_pred EEEeCCeEEEecChHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~ 416 (1427)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998874
No 365
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=326.58 Aligned_cols=204 Identities=27% Similarity=0.384 Sum_probs=168.1
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-----cccceEEEEccCCC-CCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDN-HIP 241 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~-~~~ 241 (1427)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|+++... ..++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999999875 89999999987421 23567999999863 344
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
..||+||+.++....+. .+.+ ...++.++++.+||.+..++
T Consensus 93 ~~tv~e~i~~~~~~~~~-----------~~~~------------------------~~~~~~~~l~~~~L~~~~~~---- 133 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL-----------SKEE------------------------VEKRVKEALKAVGMEGFENK---- 133 (275)
T ss_pred cccHHHHHHHHHHHcCC-----------CHHH------------------------HHHHHHHHHHHCCCchhhcC----
Confidence 57999999886422111 0000 01135678899999755444
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
.++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++ ++|||++.| ...++.++||++++|
T Consensus 134 -~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~~til~vtH-~~~~~~~~~d~i~~l 210 (275)
T PRK13639 134 -PPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKE-GITIIISTH-DVDLVPVYADKVYVM 210 (275)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEec-CHHHHHHhCCEEEEE
Confidence 45579999999999999999999999999999999999999999999998754 889998754 456778899999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 211 SDGKIIKEGTPKEVF 225 (275)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999875
No 366
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=363.71 Aligned_cols=209 Identities=23% Similarity=0.360 Sum_probs=169.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++.. .++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999986 899999999987643 5678999999987765 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++..- .. . +.++.+..+.+ ..++.++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~-~~---~------------------~~~i~~al~~~---------~l~~~i~--~lp~Gldt~ig~~g 478 (582)
T PRK11176 432 TIANNIAYARTE-QY---S------------------REQIEEAARMA---------YAMDFIN--KMDNGLDTVIGENG 478 (582)
T ss_pred hHHHHHhcCCCC-CC---C------------------HHHHHHHHHHh---------CcHHHHH--hcccccCceeCCCC
Confidence 999999875210 00 0 00111111100 0111222 25667899999876
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
..||||||||++|||||+++|+|++||||||+||+.++..+.+.|+++.+ ++|+|++.|++ +..+.||+|++|++
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~--~~tvI~VtHr~--~~~~~~D~Ii~l~~ 553 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQK--NRTSLVIAHRL--STIEKADEILVVED 553 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998743 68988876665 67889999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++++|+++++.+
T Consensus 554 g~i~e~g~~~~l~~ 567 (582)
T PRK11176 554 GEIVERGTHAELLA 567 (582)
T ss_pred CEEEEeCCHHHHHh
Confidence 99999999999864
No 367
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.9e-34 Score=316.62 Aligned_cols=198 Identities=27% Similarity=0.360 Sum_probs=167.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCCHH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELTVR 246 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lTV~ 246 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999875 999999998875322 35799999998888889999
Q ss_pred HHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCC
Q 000555 247 ETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRG 326 (1427)
Q Consensus 247 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~ 326 (1427)
||+.+.....+. ....++.+++.+||++..+. .+..
T Consensus 89 ~~~~~~~~~~~~---------------------------------------~~~~~~~~l~~~~l~~~~~~-----~~~~ 124 (223)
T TIGR03740 89 ENLKVHTTLLGL---------------------------------------PDSRIDEVLNIVDLTNTGKK-----KAKQ 124 (223)
T ss_pred HHHHHHHHHcCC---------------------------------------CHHHHHHHHHHcCCcHHHhh-----hHhh
Confidence 999876433211 00124567888999754443 4456
Q ss_pred CChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeE
Q 000555 327 VSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHL 406 (1427)
Q Consensus 327 LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~i 406 (1427)
||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.+.||++++|++|++
T Consensus 125 LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~~g~i 202 (223)
T TIGR03740 125 FSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHI-LSEVQQLADHIGIISEGVL 202 (223)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCC-HHHHHHhcCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999865 48899887655 4567889999999999999
Q ss_pred EEecChHH
Q 000555 407 VYQGPRAE 414 (1427)
Q Consensus 407 v~~G~~~~ 414 (1427)
++.|++.+
T Consensus 203 ~~~~~~~~ 210 (223)
T TIGR03740 203 GYQGKINK 210 (223)
T ss_pred EEecChhh
Confidence 99998753
No 368
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=354.80 Aligned_cols=218 Identities=25% Similarity=0.364 Sum_probs=182.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++++++ ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 78999987663 24689999999999999999999999999999999998653 5799999998753
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 907 QS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..++.+||++|++.+++.+||+|++.+....... ...+..+.++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245699999999999999999999886432210 11223344556889999999998877766 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|.|||+++|++. ++...+|++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877899999999985 57778999999986 678888
Q ss_pred cCCCC
Q 000555 1062 GKLGV 1066 (1427)
Q Consensus 1062 g~~~~ 1066 (1427)
|+...
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 77653
No 369
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.6e-34 Score=318.36 Aligned_cols=196 Identities=26% Similarity=0.332 Sum_probs=162.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999999875 999999999875421 356799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+||+||+.+.....+.. . . + ....++..++.+||.+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~--~---------~----------~--------------~~~~~~~~l~~~~l~~~~~---- 132 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGAS--G---------D----------D--------------IRRRVSAALDKVGLLDKAK---- 132 (222)
T ss_pred ccccHHHHHHhHHHhcCCC--H---------H----------H--------------HHHHHHHHHHHcCChhhhh----
Confidence 8999999999865432210 0 0 0 0112456788888875433
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+.+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.++ +.|+|++. |...++.+.||+|++
T Consensus 133 -~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tiii~s-H~~~~~~~~~d~i~~ 209 (222)
T PRK10908 133 -NFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRV-GVTVLMAT-HDIGLISRRSYRMLT 209 (222)
T ss_pred -CCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHC-CCEEEEEe-CCHHHHHHhCCEEEE
Confidence 345679999999999999999999999999999999999999999999998654 78888865 455677889999999
Q ss_pred EeCCeEE
Q 000555 401 LSEGHLV 407 (1427)
Q Consensus 401 L~~G~iv 407 (1427)
|++|+++
T Consensus 210 l~~G~i~ 216 (222)
T PRK10908 210 LSDGHLH 216 (222)
T ss_pred EECCEEc
Confidence 9999985
No 370
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-34 Score=326.56 Aligned_cols=205 Identities=24% Similarity=0.356 Sum_probs=167.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc--c---cccceEEEEccCCC-CC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE--F---HVQRTSAYISQTDN-HI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~~~-~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35999999999999999999999999999999999999876 9999999998742 1 23467999999864 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
...|+.||+.+.....+.. .. + ....++.+++.+||++..++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~--- 132 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP-----------EA----------E--------------ITRRVDEALTLVDAQHFRHQ--- 132 (271)
T ss_pred ccccHHHHHHHHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCCHhHhcC---
Confidence 5568999998864432210 00 0 01125668888898754444
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+..||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++.+ .++|+|++. |...++.++||++++
T Consensus 133 --~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vt-H~~~~~~~~~d~i~~ 208 (271)
T PRK13638 133 --PIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISS-HDIDLIYEISDAVYV 208 (271)
T ss_pred --CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEE
Confidence 4557999999999999999999999999999999999999999999999865 488988865 555677889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+++++.
T Consensus 209 l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 209 LRQGQILTHGAPGEVF 224 (271)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 371
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-34 Score=327.61 Aligned_cols=205 Identities=22% Similarity=0.310 Sum_probs=169.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 45999999999999999999999999999999999999875 99999999987542 23567999999974 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.||.||+.++....+.. +.+ ...+++++++.+||....+ .
T Consensus 97 ~tv~eni~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~-----~ 136 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-----------REE------------------------MIKRVDEALLAVNMLDFKT-----R 136 (277)
T ss_pred CCHHHHHHhhHHHcCCC-----------HHH------------------------HHHHHHHHHHHCCCHhHhh-----C
Confidence 89999998864322110 000 0113567888899975443 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.++.|+|+|++.|+. .++. .+|+|++|+
T Consensus 137 ~~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~-~~~~-~~d~i~~l~ 214 (277)
T PRK13642 137 EPARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDL-DEAA-SSDRILVMK 214 (277)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHH-hCCEEEEEE
Confidence 45679999999999999999999999999999999999999999999998765689999876554 4554 699999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++..|+++++.
T Consensus 215 ~G~i~~~g~~~~~~ 228 (277)
T PRK13642 215 AGEIIKEAAPSELF 228 (277)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998875
No 372
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-32 Score=353.58 Aligned_cols=211 Identities=27% Similarity=0.403 Sum_probs=173.0
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|+++.. +++++|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 368999999987521 235699999999999999999999999999999999998763 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
.++ ..+++.++||+|++.+++ .|++||+.++. .+.++ +.+.++++..++.+ -.|+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~~----e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTPD----EEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCCH----HHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 654 456788999999998875 69999998752 12222 33566677766543 356777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+++++.+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999998 22 235899999999975 5678999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 688888875
No 373
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8e-34 Score=321.52 Aligned_cols=212 Identities=21% Similarity=0.321 Sum_probs=170.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc----ccceEEEEccCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~~~ 242 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999876 899999998875432 23469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++...... ......... . ......++++++.+|+++..++
T Consensus 92 ~tv~~nl~~~~~~~~~---~~~~~~~~~-----------~-------------~~~~~~~~~~l~~~~l~~~~~~----- 139 (242)
T TIGR03411 92 LTVFENLELALPRDKS---VFASLFFRL-----------S-------------AEEKDRIEEVLETIGLADEADR----- 139 (242)
T ss_pred CCHHHHHHHhhhcccc---ccccccccc-----------H-------------HHHHHHHHHHHHHcCCchhhcC-----
Confidence 9999999986431100 000000000 0 0011236778999999764443
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.++.|||||||||+||||++.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.| ...++.++||++++|+
T Consensus 140 ~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH-~~~~~~~~~d~i~~l~ 216 (242)
T TIGR03411 140 LAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEH-DMEFVRSIADKVTVLH 216 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEEC-CHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999854 689888755 4567888999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++++|+.+++.
T Consensus 217 ~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 217 QGSVLAEGSLDQVQ 230 (242)
T ss_pred CCeEEeeCCHHHHh
Confidence 99999999988764
No 374
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=320.98 Aligned_cols=216 Identities=25% Similarity=0.312 Sum_probs=173.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCce---eEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGY---IEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 478889887652 2468999999999999999999999999999999999754321 379999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++.+|+.||+.+..... .....++..+.+++.++.+++. +..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 146 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLA--GIRDRDHLMEVAERSLRGAALWDEVKDRLKTPA-- 146 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCc--
Confidence 87642 134567999999999999999999998764322 1112233345566777777653 2334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 147 ---TGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 57999999999999999999999999999999999999999999999864 799999999986 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 678887764
No 375
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-34 Score=285.07 Aligned_cols=198 Identities=28% Similarity=0.420 Sum_probs=169.6
Q ss_pred cccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-------ccccceEEEEccCC
Q 000555 849 EKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-------STFARISGYVEQND 921 (1427)
Q Consensus 849 ~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~~ 921 (1427)
.....||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++... .-..+.+|+|+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 4567899999999999999999999999999999999998663 57999999987543 12346799999999
Q ss_pred CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000555 922 IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIF 1001 (1427)
Q Consensus 922 ~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~ill 1001 (1427)
.+.|++|..||+.....++-. +..+......+.++.+||.+..+.+. .+|||||+|||+||||++..|+|||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge---~~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLf 169 (228)
T COG4181 98 HLIPNLTALENVALPLELRGE---SSADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLF 169 (228)
T ss_pred eccccchhhhhccchhhhcCC---ccccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEe
Confidence 999999999999988877642 22333445778899999987766654 5899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecCcEEE
Q 000555 1002 MDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVI 1059 (1427)
Q Consensus 1002 lDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~ 1059 (1427)
-||||-+||..|...|.+++-.+.+ .|.|.|++||||. +...|||.+-|.+ |+++
T Consensus 170 ADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 170 ADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999988764 5999999999975 5678999999986 5654
No 376
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.2e-34 Score=362.29 Aligned_cols=207 Identities=22% Similarity=0.278 Sum_probs=169.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
.++|+|+|++++|||.++|+|+||||||||+++|+|+++|. +|+|.+||+++++. ..++.++||+|++.+|+.
T Consensus 354 ~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~- 429 (592)
T PRK10790 354 NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD- 429 (592)
T ss_pred CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-
Confidence 35999999999999999999999999999999999999986 89999999998754 357899999999987765
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++. .. . +.++.+.++.+ -.++.++. |++..||.+|+.+
T Consensus 430 Ti~~NI~~~~---~~--~-------------------d~~i~~a~~~~---------gl~~~i~~--lp~Gldt~i~e~g 474 (592)
T PRK10790 430 TFLANVTLGR---DI--S-------------------EEQVWQALETV---------QLAELARS--LPDGLYTPLGEQG 474 (592)
T ss_pred hHHHHHHhCC---CC--C-------------------HHHHHHHHHHc---------CcHHHHHh--ccccccccccCCC
Confidence 9999999852 11 0 01111111111 01122222 5567789999865
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
. .||||||||++|||||+.+|+|++||||||+||+.++.+|.+.|+++.+ ++|+|++.|++ +....||+|++|++
T Consensus 475 ~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~ 549 (592)
T PRK10790 475 N-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHR 549 (592)
T ss_pred C-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEEC
Confidence 4 6999999999999999999999999999999999999999999998753 68888877776 66788999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++..|+++++.+
T Consensus 550 G~i~~~G~~~~L~~ 563 (592)
T PRK10790 550 GQAVEQGTHQQLLA 563 (592)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999999874
No 377
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.14 Aligned_cols=215 Identities=24% Similarity=0.291 Sum_probs=173.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 468889887652 245899999999999999999999999999999999975421 3579999999
Q ss_pred ccCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000555 903 YPKEQ----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGFP 974 (1427)
Q Consensus 903 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 974 (1427)
.+... ...++.++|++|++.+++ .||.||+.+..... .....+...+.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQ--GIKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhc--CCCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 87531 234567999999998887 89999998764321 11122333456778888888753 22333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~ 219 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM 219 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999875 689999999985 57778999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 220 -G~i~~~g~~ 228 (249)
T PRK14253 220 -GELVEHDDT 228 (249)
T ss_pred -CEEEEeCCH
Confidence 678887764
No 378
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=313.54 Aligned_cols=201 Identities=25% Similarity=0.316 Sum_probs=181.1
Q ss_pred eeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc------cc-ccceEEEEccCCCCCC
Q 000555 853 QLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ------ST-FARISGYVEQNDIHSP 925 (1427)
Q Consensus 853 ~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~-~~~~~gyv~Q~~~~~~ 925 (1427)
.-++|+|++|+.||+..|||-||||||||+++|.+..+ +..|+|.++|.++.. .. .++.+++|+|+..++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 35789999999999999999999999999999999876 468999999987532 12 3457899999999999
Q ss_pred CCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000555 926 QVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEP 1005 (1427)
+.||.||..|+..++ ..+++++++++.++++.+||....+... ++||||+||||.|||||+.+|+||+||||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998775 5788999999999999999999999876 58999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1006 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
+|+|||--+..+++-|.++.++ ++|||++|||.+ +.+..-|||.+|+ +|+++..|++.
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~ 250 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPE 250 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHH
Confidence 9999999999999999888654 899999999987 6888999999997 47899988763
No 379
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=323.13 Aligned_cols=215 Identities=26% Similarity=0.332 Sum_probs=175.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|.... .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 589999998763 23589999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++. |++||+.+..... .....+...+.++++++.+++.+ ..+..
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 165 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQ--GINNRRVLDEAVERSLRGAALWDEVKDRLHEN--- 165 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCChhHHHHhhCC---
Confidence 87642 1346789999999988886 9999998765432 11122233456788888888853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|+
T Consensus 166 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 166 --AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred --cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999975 799999999975 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 242 ~-G~i~~~g~~ 251 (272)
T PRK14236 242 M-GKLVEYGDT 251 (272)
T ss_pred C-CEEEecCCH
Confidence 6 678887764
No 380
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-34 Score=334.79 Aligned_cols=211 Identities=25% Similarity=0.407 Sum_probs=176.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++||+++++. ++.++|+|+|+++++||++||+|+||||||||++.|+|..+ +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6899999998763 34579999999999999999999999999999999999765 3579999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccc-------cccccCCC
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLR-------DALVGFPG 975 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~~ 975 (1427)
.. ..+++.+++++|...+| .-|+++||.++. .+.+++ .+.++++.+||++.. |+.+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~AsDE----el~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PDASDE----ELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CCCCHH----HHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 34677889999977665 569999998653 233443 366788888887653 445664 4
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
++.||||||||++|||+|++|.++++|||||.|||+.|+++|++.+.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999988764 899999999975 4678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 677777765
No 381
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.8e-34 Score=316.53 Aligned_cols=194 Identities=27% Similarity=0.424 Sum_probs=159.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCC-CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDN-HIPE 242 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~-~~~~ 242 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999875 99999999887542 23467999999874 4677
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
+||+||+.++....+.. .. + ....++++++.+||+...+ +
T Consensus 91 ~t~~~~l~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~~~-----~ 130 (211)
T cd03225 91 PTVEEEVAFGLENLGLP-----------EE----------E--------------IEERVEEALELVGLEGLRD-----R 130 (211)
T ss_pred CcHHHHHHHHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCcHhhhc-----C
Confidence 89999998864322110 00 0 0113566888899875443 3
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.++ ++|+|++.|+ ..++.++||+|++|+
T Consensus 131 ~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~-~~~~~~~~d~i~~l~ 208 (211)
T cd03225 131 SPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHD-LDLLLELADRVIVLE 208 (211)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCC-HHHHHHhCCEEEEEe
Confidence 45679999999999999999999999999999999999999999999998765 8899887554 567788899999999
Q ss_pred CCe
Q 000555 403 EGH 405 (1427)
Q Consensus 403 ~G~ 405 (1427)
+|+
T Consensus 209 ~G~ 211 (211)
T cd03225 209 DGK 211 (211)
T ss_pred CCC
Confidence 985
No 382
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-33 Score=313.95 Aligned_cols=202 Identities=23% Similarity=0.332 Sum_probs=172.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+++|+++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478999987542 24589999999999999999999999999999999998653 579999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 906 EQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
.....++.++|++|++.+++.+|++||+.+....+. . ...+.++++++.++|.+..++.+ ..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543345568999999988999999999988654321 1 12345678899999987777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
|++||++++.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|+++ ++.+.+|++++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999986 57889999999863
No 383
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=325.66 Aligned_cols=216 Identities=24% Similarity=0.335 Sum_probs=171.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc--------cccceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF--------HVQRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--------~~~~~~~yv~Q~~~ 238 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+...+|+|.++|+++... ..++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 4699999999999999999999999999999999999987522469999999887431 12457999999988
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+++.+||+||+.++...... .. . +. .... . ...+.+++++++.+||++..+.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---~~---~---~~---~~~~-~--------------~~~~~~~~~~l~~~~l~~~~~~- 148 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---FW---R---TC---FSWF-T--------------REQKQRALQALTRVGMVHFAHQ- 148 (262)
T ss_pred cccCCcHHHHHHhhhccccc---ch---h---hh---cccc-c--------------HHHHHHHHHHHHHcCCHHHHhC-
Confidence 89999999999875321000 00 0 00 0000 0 0011246778999999754444
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
.+..|||||||||+|||||+.+|++++|||||+|||..+...+.+.|++++++.|+|+|++.|+ ..++.++||++
T Consensus 149 ----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~-~~~~~~~~d~i 223 (262)
T PRK09984 149 ----RVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQ-VDYALRYCERI 223 (262)
T ss_pred ----CccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEE
Confidence 4556999999999999999999999999999999999999999999999976568899987554 46678999999
Q ss_pred EEEeCCeEEEecChHHH
Q 000555 399 LLLSEGHLVYQGPRAEV 415 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~ 415 (1427)
++|++|++++.|+++++
T Consensus 224 ~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 224 VALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 384
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.8e-34 Score=318.36 Aligned_cols=201 Identities=24% Similarity=0.328 Sum_probs=165.4
Q ss_pred eccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc--eeEEEEEECCccCCcccc-cceEEEEccCCC--CCCCCC
Q 000555 854 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG--YIEGDIKISGYPKEQSTF-ARISGYVEQNDI--HSPQVT 928 (1427)
Q Consensus 854 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 928 (1427)
+|+|+|+++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976521 157999999987654322 357999999974 557799
Q ss_pred HHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000555 929 VEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD---SLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEP 1005 (1427)
Q Consensus 929 v~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEP 1005 (1427)
+.|++.+...... ....+..+.++++++.+++. +..+..+ ..||||||||++|||+|+.+|++|+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977643221 11233445688999999997 3445544 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1006 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1006 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999976 56778999999986 678877764
No 385
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-34 Score=320.59 Aligned_cols=201 Identities=22% Similarity=0.396 Sum_probs=167.0
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~lT 244 (1427)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999999875 99999999987532 23567999999987776 69
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.++....+. ...+++.+++.+||+.. ..++.+
T Consensus 93 v~e~l~~~~~~~~~---------------------------------------~~~~~~~~l~~~~l~~~----~~~~~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKGE---------------------------------------KNVDVEYYLSIVGLNKE----YATRDV 129 (241)
T ss_pred HHHHHhcchhhcCc---------------------------------------HHHHHHHHHHHcCCCHH----HhhCCc
Confidence 99999875321100 00124567888898521 123455
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.++.|+|+|++.| ..+++.++||+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH-~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITH-NMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEec-cHHHHHHhCCEEEEEeCC
Confidence 6799999999999999999999999999999999999999999999987655889988654 556778899999999999
Q ss_pred eEEEecChHHHH
Q 000555 405 HLVYQGPRAEVL 416 (1427)
Q Consensus 405 ~iv~~G~~~~~~ 416 (1427)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999998764
No 386
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=313.92 Aligned_cols=223 Identities=22% Similarity=0.324 Sum_probs=180.2
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC-C--ceeEEEEEECCc
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT-G--GYIEGDIKISGY 903 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~-~--~~~~G~i~i~g~ 903 (1427)
++.+|++.++... .+..++++||||++++||++||+|.|||||||+.++|.|... + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 4678887655432 124579999999999999999999999999999999999764 2 346689999998
Q ss_pred cCCc---c---c-ccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCC-CHHHHHHHHHHHHHHcCCcccccccccC
Q 000555 904 PKEQ---S---T-FARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEV-SKNQRHEFVEEVMRLVELDSLRDALVGF 973 (1427)
Q Consensus 904 ~~~~---~---~-~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~-~~~~~~~~v~~~l~~l~L~~~~~~~vg~ 973 (1427)
++-. . . +.+.++|++|++ .+.|.+||.+-+.=..... ... +.++..+++.++++.++|.+.....-
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h--~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~-- 148 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLH--GKGLSKKEAKERAIELLELVGIPDPERRLK-- 148 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHh--hcchhhHHHHHHHHHHHHHcCCCCHHHHHh--
Confidence 6422 1 1 235799999996 5789999988776544332 112 34556778899999999986532221
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
..+.+|||||||||.||.||+.+|++|+.||||++||...+.+|+++|+++.+ .|.|+|++|||+. -+.+.+|||+||
T Consensus 149 ~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VM 227 (316)
T COG0444 149 SYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVM 227 (316)
T ss_pred hCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEE
Confidence 22468999999999999999999999999999999999999999999999986 6999999999987 488899999999
Q ss_pred ecCcEEEEccCC
Q 000555 1053 KRGGRVIYGGKL 1064 (1427)
Q Consensus 1053 ~~gg~~~~~g~~ 1064 (1427)
.. |++++.|+.
T Consensus 228 Ya-G~iVE~g~~ 238 (316)
T COG0444 228 YA-GRIVEEGPV 238 (316)
T ss_pred EC-cEEEEeCCH
Confidence 86 789998886
No 387
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.20 Aligned_cols=213 Identities=23% Similarity=0.334 Sum_probs=170.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc---cccceEEEEccCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~ 241 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|. .+.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998742 12489999999987542 23567999999988888
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGN 321 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~ 321 (1427)
.+||+||+.++.+...... .. .+ ....++++++.+||.+..+. .-+
T Consensus 96 ~~tv~enl~~~~~~~~~~~---------~~----------~~--------------~~~~~~~~l~~~~l~~~~~~-~~~ 141 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVK---------SK----------KE--------------LQERVRWALEKAQLWDEVKD-RLD 141 (250)
T ss_pred CCcHHHHHHHHHHhccccC---------CH----------HH--------------HHHHHHHHHHHcCCCcchhh-hhc
Confidence 9999999998754321100 00 00 01135668888888542111 124
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. + ++|+|++.|+ ..++.+.||++++|
T Consensus 142 ~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~~tiii~sH~-~~~~~~~~d~i~~l 218 (250)
T PRK14247 142 APAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK-K-DMTIVLVTHF-PQQAARISDYVAFL 218 (250)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-CCEEEEEeCC-HHHHHHhcCEEEEE
Confidence 4566899999999999999999999999999999999999999999999984 3 6888886554 55778899999999
Q ss_pred eCCeEEEecChHHHH
Q 000555 402 SEGHLVYQGPRAEVL 416 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~ 416 (1427)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 219 YKGQIVEWGPTREVF 233 (250)
T ss_pred ECCeEEEECCHHHHH
Confidence 999999999998874
No 388
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-34 Score=315.44 Aligned_cols=195 Identities=24% Similarity=0.376 Sum_probs=162.0
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCHHHHHH
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTVRETFD 250 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1427)
|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999875 899999999875432 2467999999998888999999998
Q ss_pred HHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChH
Q 000555 251 FAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGG 330 (1427)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 330 (1427)
++...... ..+ ..+..++++++.+||++..++ .+..||||
T Consensus 93 ~~~~~~~~----------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G 132 (211)
T cd03298 93 LGLSPGLK----------LTA-------------------------EDRQAIEVALARVGLAGLEKR-----LPGELSGG 132 (211)
T ss_pred cccccccC----------ccH-------------------------HHHHHHHHHHHHcCCHHHHhC-----CcccCCHH
Confidence 75321100 000 001235678899999754444 44579999
Q ss_pred HhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEec
Q 000555 331 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQG 410 (1427)
Q Consensus 331 qkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G 410 (1427)
||||++||++|+.+|++++|||||+|||..++..+.+.|+++.++.++|+|++. |...++.++||++++|++|+++..|
T Consensus 133 ~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 133 ERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVT-HQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999998766688999864 5566788899999999999998764
No 389
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=364.77 Aligned_cols=213 Identities=26% Similarity=0.362 Sum_probs=176.8
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++++||+|+++. .++++|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 36999999998742 235699999999999999999999999999999999998763 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-------SLRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 974 (1427)
.++ ..+++.++||+|++.+++ .|++||+.++. +...+++ .++++++..++. +-.|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~~----~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSRE----QIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCHH----HHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456788999999998886 69999998642 1122333 355566666543 3457888754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+++||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4799999999974 5778999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 688888874
No 390
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.5e-32 Score=356.19 Aligned_cols=212 Identities=29% Similarity=0.437 Sum_probs=175.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++++||+|+++. +++.+|+|+|++++|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 46999999998741 234689999999999999999999999999999999998653 57999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
.++ ..+++.++||+|++.+++ .|++||+.++. .+.+++ .+.++++..++.+ -.|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~~----~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPFE----HVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCHH----HHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 456788999999988876 69999997642 122332 3445555555433 357777754
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999885 5899999999985 4567999999986
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 688888874
No 391
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.87 Aligned_cols=215 Identities=27% Similarity=0.323 Sum_probs=173.9
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc-
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 904 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 478999987653 2458999999999999999999999999999999999765 357999999986
Q ss_pred ----CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000555 905 ----KEQS---T----FARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-LRDAL 970 (1427)
Q Consensus 905 ----~~~~---~----~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 970 (1427)
+... . .++.++|++|++. +.+.+|+.||+.+..... ......+..+.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAV--GARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHh--ccCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999973 577889999987643211 11122234556788999999963 45554
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceE
Q 000555 971 VGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1049 (1427)
Q Consensus 971 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1049 (1427)
+ ..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. .+...+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 579999999999999999999999999999999999999999999998764 899999999975 466689999
Q ss_pred EEEecCcEEEEccCC
Q 000555 1050 LLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1050 ~~l~~gg~~~~~g~~ 1064 (1427)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 688888764
No 392
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.1e-34 Score=282.85 Aligned_cols=201 Identities=30% Similarity=0.411 Sum_probs=172.3
Q ss_pred ccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEcc
Q 000555 163 KRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQ 235 (1427)
Q Consensus 163 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q 235 (1427)
.....+||++|++.|++||-++|+|||||||||||-+|+|+.+|+ +|+|.+-|+++.... ..+.+|+|+|
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQ 95 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQ 95 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEE
Confidence 345678999999999999999999999999999999999999886 999999999886542 2478999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccc
Q 000555 236 TDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCS 315 (1427)
Q Consensus 236 ~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 315 (1427)
.-.++|++|-.||+...+.+++-. .. +........|+.+||.+-.
T Consensus 96 SF~Lip~ltAlENV~lPleL~ge~--~~---------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 96 SFHLIPNLTALENVALPLELRGES--SA---------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred eeeccccchhhhhccchhhhcCCc--cc---------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999987776521 00 0011245678999997533
Q ss_pred ccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhc
Q 000555 316 ETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLF 395 (1427)
Q Consensus 316 ~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~ 395 (1427)
+.++.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.++.|.|.|+++|.| .+...|
T Consensus 141 -----~HyP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~--~LA~Rc 213 (228)
T COG4181 141 -----THYPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDP--QLAARC 213 (228)
T ss_pred -----ccCccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCH--HHHHhh
Confidence 2356689999999999999999999999999999999999999999999999899999999987665 678899
Q ss_pred CcEEEEeCCeEEE
Q 000555 396 DDLLLLSEGHLVY 408 (1427)
Q Consensus 396 D~vilL~~G~iv~ 408 (1427)
||.+-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 393
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.6e-33 Score=320.91 Aligned_cols=214 Identities=21% Similarity=0.296 Sum_probs=173.3
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc--eeEEEEEECC
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG--YIEGDIKISG 902 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g 902 (1427)
..++++|+++.++ +.+|+|+|+++++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3588999987651 24899999999999999999999999999999999976531 1579999999
Q ss_pred ccCCcccc-cceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000555 903 YPKEQSTF-ARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS---LRDALVGFPGS 976 (1427)
Q Consensus 903 ~~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~ 976 (1427)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... ..+.++++++.++|.+ ..+..+
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~~----- 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLYP----- 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcCC-----
Confidence 87643322 357999999974 4567899998876433211 111 2256788999999976 334443
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999975 46678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 678888764
No 394
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=331.56 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=170.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|++|++||+++|+|||||||||||++|+|+.++. .+.+|+|.++|+++... ..++.++||+|+++.
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999998631 12489999999998532 346789999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
+ +.||+||+.|+....+.. ..+. .+..++.+++.++|.+..++.+
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~-----------~~~~-----------------------~~~~~~~~l~~~~L~~~l~~~~ 219 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIN-----------DRKI-----------------------LEKIVEKSLKSAALWDEVKDDL 219 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCC-----------hHHH-----------------------HHHHHHHHHHHcCCcchhhhhh
Confidence 6 579999999875432110 0000 0012455677788765545555
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
+. ...+|||||||||+|||||+.+|+|++|||||+|||+.+...+.++|+++.+ ++|+|++.|+ ...+.+.||+|+
T Consensus 220 ~~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iTH~-l~~i~~~~Drii 295 (329)
T PRK14257 220 DK-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVTHS-MAQAQRISDETV 295 (329)
T ss_pred hC-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCC-HHHHHHhCCEEE
Confidence 54 4557999999999999999999999999999999999999999999999864 6898887555 556778899999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+++++.
T Consensus 296 vl~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 296 FFYQGWIEEAGETKTIF 312 (329)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999999985
No 395
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=317.33 Aligned_cols=206 Identities=25% Similarity=0.360 Sum_probs=172.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999875 899999999876432 34679999999988888999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.++....+... . .....++.+++.+||++..++. +.
T Consensus 90 ~~nl~~~~~~~~~~~----------------------~-------------~~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------A-------------EIKERVAEALDLVQLEGYANRK-----PS 129 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------H-------------HHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 999988654332100 0 0011356788999997654443 45
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.++||++++|++|+
T Consensus 130 ~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~-~~~~~~~~d~i~~l~~G~ 208 (232)
T cd03300 130 QLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHD-QEEALTMSDRIAVMNKGK 208 (232)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999999876558899997655 466788999999999999
Q ss_pred EEEecChHHHH
Q 000555 406 LVYQGPRAEVL 416 (1427)
Q Consensus 406 iv~~G~~~~~~ 416 (1427)
+++.|+.+++.
T Consensus 209 ~~~~~~~~~~~ 219 (232)
T cd03300 209 IQQIGTPEEIY 219 (232)
T ss_pred EEecCCHHHHH
Confidence 99999987764
No 396
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=321.37 Aligned_cols=221 Identities=23% Similarity=0.296 Sum_probs=176.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.+. ...+|+|+||++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988763 235899999999999999999999999999999999975431 1369999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.+... ..+++.++|++|+..+++ .|++||+.+...... ..+..+..+.+.++++.+++.+..+...+ ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIH-KSAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87531 234567999999988888 899999987643221 11233344567889999988542211111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEecC-
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRG- 1055 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~g- 1055 (1427)
.||||||||++|||+|+++|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 577889999999863
Q ss_pred ---cEEEEccCC
Q 000555 1056 ---GRVIYGGKL 1064 (1427)
Q Consensus 1056 ---g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 788888875
No 397
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=329.92 Aligned_cols=206 Identities=22% Similarity=0.339 Sum_probs=167.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc--------ccccceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE--------FHVQRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--------~~~~~~~~yv~Q~~~ 238 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. ...++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35999999999999999999999999999999999999875 8999999988642 123567999999863
Q ss_pred -CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-cccc
Q 000555 239 -HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSE 316 (1427)
Q Consensus 239 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~ 316 (1427)
.+...||+||+.|+....+.. ..+ ....++.+++.++|+ ...+
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~-----------~~~------------------------~~~~~~~ll~~~~L~~~~~~ 145 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN-----------KQE------------------------AYKKVPELLKLVQLPEDYVK 145 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCCChhHhc
Confidence 233469999999864322110 000 001256678888884 3333
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
+.+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++.++|+|++.| ..+++.++||
T Consensus 146 -----~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH-~~~~~~~~~d 219 (289)
T PRK13645 146 -----RSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTH-NMDQVLRIAD 219 (289)
T ss_pred -----CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEec-CHHHHHHhCC
Confidence 3456799999999999999999999999999999999999999999999987656889998755 4567889999
Q ss_pred cEEEEeCCeEEEecChHHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~~ 416 (1427)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 220 EVIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988874
No 398
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=318.14 Aligned_cols=204 Identities=27% Similarity=0.411 Sum_probs=171.2
Q ss_pred eeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCHHH
Q 000555 169 ILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTVRE 247 (1427)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~E 247 (1427)
+|+|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999876 899999999876432 3467999999998898999999
Q ss_pred HHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCC
Q 000555 248 TFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGV 327 (1427)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 327 (1427)
|+.++....+.. . .+. ...+.+.++.+||.+..++. ++.|
T Consensus 91 ~l~~~~~~~~~~--~-------------------~~~--------------~~~~~~~l~~~~l~~~~~~~-----~~~L 130 (235)
T cd03299 91 NIAYGLKKRKVD--K-------------------KEI--------------ERKVLEIAEMLGIDHLLNRK-----PETL 130 (235)
T ss_pred HHHHHHHHcCCC--H-------------------HHH--------------HHHHHHHHHHcCChhHHhcC-----cccC
Confidence 998864332110 0 000 11245678889997654443 4569
Q ss_pred ChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEE
Q 000555 328 SGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLV 407 (1427)
Q Consensus 328 SGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv 407 (1427)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.++||++++|++|+++
T Consensus 131 S~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~-~~~~~~~~d~i~~l~~G~i~ 209 (235)
T cd03299 131 SGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHD-FEEAWALADKVAIMLNGKLI 209 (235)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999876568899997665 46778899999999999999
Q ss_pred EecChHHHH
Q 000555 408 YQGPRAEVL 416 (1427)
Q Consensus 408 ~~G~~~~~~ 416 (1427)
+.|+.+++.
T Consensus 210 ~~~~~~~~~ 218 (235)
T cd03299 210 QVGKPEEVF 218 (235)
T ss_pred EecCHHHHH
Confidence 999988764
No 399
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=323.32 Aligned_cols=210 Identities=21% Similarity=0.305 Sum_probs=167.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|.+++. .+.+|+|.++|+++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35999999999999999999999999999999999998752 02489999999887431 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ +||+||+.|+.+..+.. ..+ ....++++++.+|+...... .
T Consensus 105 ~~-~tv~enl~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~~-~ 147 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN-----------KKD------------------------LDGVVENALRSAALWDETSD-R 147 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC-----------HHH------------------------HHHHHHHHHHHcCCCcchhh-h
Confidence 77 89999999875432210 000 00125667888887421111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..+..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++. + ++|+|++.|+ ..++.++||+|+
T Consensus 148 ~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~-~-~~tiiivsH~-~~~~~~~~d~i~ 224 (258)
T PRK14268 148 LKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK-K-DYTIVIVTHN-MQQAARISDYTG 224 (258)
T ss_pred hcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-h-CCEEEEEECC-HHHHHHhCCEEE
Confidence 134556799999999999999999999999999999999999999999999985 3 6898887554 567788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+++++.
T Consensus 225 ~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 225 FFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999998774
No 400
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.6e-34 Score=311.15 Aligned_cols=195 Identities=28% Similarity=0.346 Sum_probs=166.1
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5678876552 24689999999999999999999999999999999998653 57999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 908 --STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
..+++.++|++|++.+++.+|++||+.+.... . ..+.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHH
Confidence 23566799999999888999999999875311 1 2345788999999988777665 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|+|+++|++. +....+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999975 577788998877
No 401
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.9e-34 Score=324.78 Aligned_cols=207 Identities=21% Similarity=0.272 Sum_probs=169.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCC--CCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDN--HIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~--~~~ 241 (1427)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999876 999999999875321 2356999999864 567
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc-cccccccc
Q 000555 242 ELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD-LCSETVVG 320 (1427)
Q Consensus 242 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~~t~vg 320 (1427)
.+||.|++.+..+.... .... + ....++.+++.+||. ...+
T Consensus 103 ~~tv~~~l~~~~~~~~~----------~~~~----------~--------------~~~~~~~~l~~~~l~~~~~~---- 144 (267)
T PRK15112 103 RQRISQILDFPLRLNTD----------LEPE----------Q--------------REKQIIETLRQVGLLPDHAS---- 144 (267)
T ss_pred chhHHHHHHHHHHhccC----------CCHH----------H--------------HHHHHHHHHHHcCCChHHHh----
Confidence 88999999886543210 0000 0 011356789999994 3333
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.++.++|||++.| ...++.++||++++
T Consensus 145 -~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH-~~~~~~~~~d~i~~ 222 (267)
T PRK15112 145 -YYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQ-HLGMMKHISDQVLV 222 (267)
T ss_pred -cCchhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeC-CHHHHHHhcCEEEE
Confidence 3456799999999999999999999999999999999999999999999987656889988755 45678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|++++.|+.+++.
T Consensus 223 l~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 223 MHQGEVVERGSTADVL 238 (267)
T ss_pred EECCEEEecCCHHHHh
Confidence 9999999999988764
No 402
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=322.48 Aligned_cols=215 Identities=21% Similarity=0.300 Sum_probs=173.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999987663 2468999999999999999999999999999999999632 1 13579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++. |++||+.+..... ........++.+.+.++.+++.+ ..+..+
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 162 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSSA-- 162 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCc--
Confidence 87642 1345679999999988875 9999998764322 11122223455777888888752 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 163 ---~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 163 ---LSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 57999999999999999999999999999999999999999999999865 689999999975 4777899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 6 678887764
No 403
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.1e-34 Score=370.68 Aligned_cols=206 Identities=23% Similarity=0.327 Sum_probs=166.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++. ..++.++||+|++.+| +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 46999999999999999999999999999999999999986 99999999998664 3578999999998766 46
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++.. .. . +.++.+..+.+ ..++.++ .++...||.+|+.+
T Consensus 568 Ti~eNi~l~~~--~~---~------------------~~~i~~al~~~---------~l~~~i~--~lp~gl~t~i~e~G 613 (710)
T TIGR03796 568 TVRDNLTLWDP--TI---P------------------DADLVRACKDA---------AIHDVIT--SRPGGYDAELAEGG 613 (710)
T ss_pred cHHHHhhCCCC--CC---C------------------HHHHHHHHHHh---------CCHHHHH--hCcCcccceeccCC
Confidence 99999987410 00 0 00111111110 0111222 25567789999876
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
.+||||||||++||||++++|+|++||||||+||+.++.+|.+.|++ .++|+|++.|++ +....||+|++|++
T Consensus 614 -~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~ 686 (710)
T TIGR03796 614 -ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLER 686 (710)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeC
Confidence 47999999999999999999999999999999999999999999875 378998876665 56788999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++++|+++++.+
T Consensus 687 G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 687 GKVVQRGTHEELWA 700 (710)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 404
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-33 Score=311.28 Aligned_cols=199 Identities=24% Similarity=0.312 Sum_probs=165.5
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56788877652 2468999999999999999999999999999999999865 35799999998754
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000555 907 Q--STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQR 984 (1427)
Q Consensus 907 ~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 984 (1427)
. ..+++.++|++|++.+++.+|+.||+.+...... . ...+.++++++.++|.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999999999999999988754321 1 22356788999999987777665 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEE
Q 000555 985 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 1052 (1427)
Q Consensus 985 qrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1052 (1427)
||++||+||+++|++++|||||+|||+.+...+.+.|+++.++|+|||+++|++. .+-..-++++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999975 344444566555
No 405
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.72 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=165.7
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCeecCcc-----cccceEEEEccCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSL--KKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1427)
++|+|+|+++++||+++|+||||||||||+++|+|.++|.. +.+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999988631 2489999999886421 2356799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+ +||+||+.|+....+... . .+ ....++..++.+++.+... ..-
T Consensus 101 ~-~tv~eni~~~~~~~~~~~----------~----------~~--------------~~~~~~~~l~~~~l~~~l~-~~~ 144 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKD----------K----------KK--------------LDEIVEQSLKKSALWNEVK-DKL 144 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCC----------H----------HH--------------HHHHHHHHHHHhCCchhhH-HHH
Confidence 4 899999998754322100 0 00 0112456677777632110 112
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
+..++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.| ...++.+++|++++
T Consensus 145 ~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~~tvii~sH-~~~~~~~~~d~i~~ 221 (254)
T PRK14273 145 NTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-E-SYTIIIVTH-NMQQAGRISDRTAF 221 (254)
T ss_pred hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-c-CCEEEEEeC-CHHHHHHhCCEEEE
Confidence 33456799999999999999999999999999999999999999999999985 3 688888655 45677889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|+++.+|+++++.
T Consensus 222 l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 222 FLNGCIEEESSTDELF 237 (254)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999998874
No 406
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=354.35 Aligned_cols=218 Identities=25% Similarity=0.334 Sum_probs=181.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|++++++ ++.+|+|+||++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 378999987652 2468999999999999999999999999999999999865 3579999999876
Q ss_pred Cccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhcc--C-Cc-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 906 EQST----FARISGYVEQNDIHSPQVTVEESLWFSANLR--L-SK-EVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 906 ~~~~----~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~--~-~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.... .++.+||++|++.+++.+||+||+.++.... . .. ..+.++..+.++++++.++|.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 4311 2356999999999999999999998753211 0 00 0123344567889999999988878776 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. .+...+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999975 46678999999986 67
Q ss_pred EEEccCCC
Q 000555 1058 VIYGGKLG 1065 (1427)
Q Consensus 1058 ~~~~g~~~ 1065 (1427)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 88888764
No 407
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=320.58 Aligned_cols=204 Identities=25% Similarity=0.327 Sum_probs=167.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc---------ccccceEEEEccCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE---------FHVQRTSAYISQTD 237 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~---------~~~~~~~~yv~Q~~ 237 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++.. ...++.++|++|++
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~ 91 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQY 91 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCc
Confidence 35999999999999999999999999999999999999875 8999999987631 12346799999999
Q ss_pred CCCCCCCHHHHHHHH-HHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccc
Q 000555 238 NHIPELTVRETFDFA-ARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSE 316 (1427)
Q Consensus 238 ~~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~ 316 (1427)
.+++.+||+||+.+. ....+.. .. + ....++..++.+||+...+
T Consensus 92 ~~~~~~tv~e~i~~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~gl~~~~~ 136 (242)
T PRK11124 92 NLWPHLTVQQNLIEAPCRVLGLS-----------KD----------Q--------------ALARAEKLLERLRLKPYAD 136 (242)
T ss_pred cccCCCcHHHHHHHHHHHHcCCC-----------HH----------H--------------HHHHHHHHHHHcCChhhhh
Confidence 899999999999753 2221110 00 0 0113567888999975444
Q ss_pred cccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcC
Q 000555 317 TVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFD 396 (1427)
Q Consensus 317 t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D 396 (1427)
. .++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.+++|
T Consensus 137 ~-----~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~-~~~~~~~~d 209 (242)
T PRK11124 137 R-----FPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHE-VEVARKTAS 209 (242)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCC-HHHHHHhcC
Confidence 3 4567999999999999999999999999999999999999999999999864 48898887555 457778999
Q ss_pred cEEEEeCCeEEEecChHHH
Q 000555 397 DLLLLSEGHLVYQGPRAEV 415 (1427)
Q Consensus 397 ~vilL~~G~iv~~G~~~~~ 415 (1427)
++++|++|+++++|+++++
T Consensus 210 ~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 210 RVVYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEEEECCEEEEeCCHHHh
Confidence 9999999999999998764
No 408
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=324.86 Aligned_cols=215 Identities=23% Similarity=0.310 Sum_probs=173.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 902 (1427)
.++++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999987663 2358999999999999999999999999999999999632 1 12579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++. ||+||+.+....+. ..+.....+.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988875 99999998654321 112223345677888888874 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 358999999999999999999999999999999999999999999999865 689999999976 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 678888764
No 409
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.17 Aligned_cols=210 Identities=22% Similarity=0.307 Sum_probs=166.0
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1427)
++|+|+|+++++||+++|+|||||||||||++|+|..+ +..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 59999999999999999999999999999999999864 1112489999999987531 2356799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+ .||+||+.++....+.. .. . .....++..++.+||.....+. -
T Consensus 100 ~-~tv~enl~~~~~~~~~~--~~--------~------------------------~~~~~~~~~l~~~~l~~~~~~~-~ 143 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVK--DK--------A------------------------YLAERVERSLRHAALWDEVKDR-L 143 (253)
T ss_pred c-CcHHHHHHHHHHHcCCC--CH--------H------------------------HHHHHHHHHHHHcCCchhhhHH-h
Confidence 7 59999999875432210 00 0 0011245677778875321111 2
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
++.++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. + ++|+|++.| ...++.++||+|++
T Consensus 144 ~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~~tvii~tH-~~~~~~~~~d~v~~ 220 (253)
T PRK14242 144 HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-A-RYTIIIVTH-NMQQAARVSDVTAF 220 (253)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-CCeEEEEEe-cHHHHHHhCCEEEE
Confidence 34566899999999999999999999999999999999999999999999984 3 688888755 45677889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|+++..|+++++.
T Consensus 221 l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 221 FYMGKLIEVGPTEQIF 236 (253)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 410
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=6.5e-32 Score=347.35 Aligned_cols=123 Identities=24% Similarity=0.349 Sum_probs=100.1
Q ss_pred CCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000555 926 QVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFPGSSGLSTEQRKRLTIAVELVA---NPSIIF 1001 (1427)
Q Consensus 926 ~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqrl~ia~aL~~---~p~ill 1001 (1427)
++||.|.+.|...+. . .....++++.+||... .+..+ ..||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~------i~~~l~~L~~~gL~~l~l~~~~-----~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---S------ISRKLQTLCDVGLGYIKLGQPA-----TTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---c------hhHHHHHHHHcCCCchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 467778777765432 1 1124577888999753 44443 5799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe-----cCcEEEEccCC
Q 000555 1002 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK-----RGGRVIYGGKL 1064 (1427)
Q Consensus 1002 lDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~gg~~~~~g~~ 1064 (1427)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|++++|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 456799999994 57899998875
No 411
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-33 Score=357.86 Aligned_cols=201 Identities=28% Similarity=0.423 Sum_probs=168.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++++.. .++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 36999999999999999999999999999999999999986 999999999987643 5678999999987665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCC------cccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGL------DLCSET 317 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~~t 317 (1427)
|++||+.++..- . .+++ +.++++..|+ ++..||
T Consensus 429 ti~~Ni~~~~~~--~---------------------~~~~------------------i~~al~~~~l~~~i~~p~GldT 467 (574)
T PRK11160 429 TLRDNLLLAAPN--A---------------------SDEA------------------LIEVLQQVGLEKLLEDDKGLNA 467 (574)
T ss_pred cHHHHhhcCCCc--c---------------------CHHH------------------HHHHHHHcCCHHHHcCccccCc
Confidence 999999885210 0 0011 2223333333 456789
Q ss_pred ccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCc
Q 000555 318 VVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDD 397 (1427)
Q Consensus 318 ~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~ 397 (1427)
.+|+.+. .||||||||++|||+++.+|++++||||||+||+.++..|.+.|+++. .++|+|++.|++ +..+.||+
T Consensus 468 ~vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiitHr~--~~~~~~d~ 542 (574)
T PRK11160 468 WLGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMITHRL--TGLEQFDR 542 (574)
T ss_pred hhcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEecCh--hHHHhCCE
Confidence 9998754 699999999999999999999999999999999999999999999874 378988877776 45677999
Q ss_pred EEEEeCCeEEEecChHHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~~ 417 (1427)
|++|++|++++.|+++++.+
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999864
No 412
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=319.40 Aligned_cols=215 Identities=24% Similarity=0.310 Sum_probs=172.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--c-eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 902 (1427)
.++++|+++++. .+++|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 478999988663 24589999999999999999999999999999999997541 1 2579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ...++.++|++|++.+++ .||+||+.+...... ....+...+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988876 799999987643221 1112233456788889888842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 358999999999999999999999999999999999999999999999854 789999999975 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 577777764
No 413
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-35 Score=296.42 Aligned_cols=206 Identities=25% Similarity=0.403 Sum_probs=179.3
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc---ccccceEEEEccCCCCCCC
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQNDIHSPQ 926 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~ 926 (1427)
+.+.+|+++|..|++|.+++|+|||||||||||.++++... ..+|+|.++|.+... ..+++.++...|+......
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~r 89 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINSR 89 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhhe
Confidence 46789999999999999999999999999999999998765 358999999998643 4567778899999988899
Q ss_pred CCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000555 927 VTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1006 (1427)
Q Consensus 927 lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPT 1006 (1427)
+||+|-+.|+..-. ......++.+..+++.++.++|+++.|... .+||||||||.-||+.++++.+.++||||.
T Consensus 90 lTV~dLv~FGRfPY-SqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEPL 163 (252)
T COG4604 90 LTVRDLVGFGRFPY-SQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEPL 163 (252)
T ss_pred eEHHHHhhcCCCcc-cCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCcc
Confidence 99999999974322 223334556678999999999999999987 489999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCC
Q 000555 1007 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLG 1065 (1427)
Q Consensus 1007 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~ 1065 (1427)
++||...+..+|+.||+++++ |+||+++.||.+. .-.+.|+|+-|++ |+++..|++.
T Consensus 164 NNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~ 221 (252)
T COG4604 164 NNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPD 221 (252)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHH
Confidence 999999999999999999875 9999999999874 4456799999986 7999999875
No 414
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=320.40 Aligned_cols=209 Identities=20% Similarity=0.277 Sum_probs=166.4
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1427)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2113489999999987421 2356799999998777
Q ss_pred CCCCHHHHHHHHHHhc-CCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 241 PELTVRETFDFAARWQ-GANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
+ .||+||+.++.... +.. .. + ...+++++++.+|+........
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~-----------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~ 150 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS-----------RA----------E--------------MDERVEWALTKAALWNEVKDKL 150 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC-----------HH----------H--------------HHHHHHHHHHHcCCChhhHHHH
Confidence 7 89999998865432 110 00 0 0113566788888743211111
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
++....|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.|+ ..++.+++|+++
T Consensus 151 -~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~-~~tiii~sH~-~~~~~~~~d~i~ 226 (260)
T PRK10744 151 -HQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-Q-DYTVVIVTHN-MQQAARCSDYTA 226 (260)
T ss_pred -hcCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEeCC-HHHHHHhCCEEE
Confidence 34456799999999999999999999999999999999999999999999984 3 6788886554 567778999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|+++..|+.+++.
T Consensus 227 ~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 227 FMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988874
No 415
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=319.55 Aligned_cols=215 Identities=27% Similarity=0.305 Sum_probs=173.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478999987653 246899999999999999999999999999999999964311 1479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ...++.++|++|++.+++. ||+||+.+....+. .....+.++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87642 2345679999999988874 99999998754331 1122333456778888888743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
...||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999875 689999999975 4667899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 223 ~-G~i~~~g~~ 232 (253)
T PRK14261 223 L-GKLIEFDKT 232 (253)
T ss_pred C-CEEEEcCCH
Confidence 6 678887764
No 416
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.5e-33 Score=312.66 Aligned_cols=199 Identities=22% Similarity=0.331 Sum_probs=164.5
Q ss_pred eeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-cccceEEEEccCCCCCCCCCHHH
Q 000555 169 ILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-HVQRTSAYISQTDNHIPELTVRE 247 (1427)
Q Consensus 169 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~~~~~~~lTV~E 247 (1427)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 457999999999999999999999999999999999876 99999999987542 23567999999998898999999
Q ss_pred HHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCC
Q 000555 248 TFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGV 327 (1427)
Q Consensus 248 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~L 327 (1427)
|+.+....... . . ...+..++++++.+||++..+ +.++.|
T Consensus 90 n~~~~~~~~~~---~------------------~--------------~~~~~~~~~~l~~~~l~~~~~-----~~~~~L 129 (213)
T TIGR01277 90 NIGLGLHPGLK---L------------------N--------------AEQQEKVVDAAQQVGIADYLD-----RLPEQL 129 (213)
T ss_pred HHHhHhhccCC---c------------------c--------------HHHHHHHHHHHHHcCcHHHhh-----CCcccC
Confidence 99875321100 0 0 000123567889999975443 345679
Q ss_pred ChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEE
Q 000555 328 SGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLV 407 (1427)
Q Consensus 328 SGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv 407 (1427)
|||||||++||++++.+|++++|||||+|||..++..+.+.|+++.++.++|+|++.|+ ..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~-~~~~~~~~d~v~~l~~g~i~ 208 (213)
T TIGR01277 130 SGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHH-LSDARAIASQIAVVSQGKIK 208 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHhhcCeEEEEECCeEE
Confidence 99999999999999999999999999999999999999999999876557899886554 56778899999999999999
Q ss_pred EecC
Q 000555 408 YQGP 411 (1427)
Q Consensus 408 ~~G~ 411 (1427)
..|.
T Consensus 209 ~~~~ 212 (213)
T TIGR01277 209 VVSD 212 (213)
T ss_pred EecC
Confidence 8875
No 417
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=324.83 Aligned_cols=210 Identities=20% Similarity=0.338 Sum_probs=171.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999999875 89999999987542 2345799999999888889
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.++..-... .... . .+ .....++++++.+||++.. ++.
T Consensus 97 tv~~~~~~~~~~~~~------~~~~-----------~-~~-------------~~~~~~~~~l~~~~l~~~~-----~~~ 140 (265)
T PRK10253 97 TVQELVARGRYPHQP------LFTR-----------W-RK-------------EDEEAVTKAMQATGITHLA-----DQS 140 (265)
T ss_pred cHHHHHHhCcccccc------cccC-----------C-CH-------------HHHHHHHHHHHHcCCHHHh-----cCC
Confidence 999999874210000 0000 0 00 0012356788999997543 445
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
++.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.++||++++|++
T Consensus 141 ~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~-~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 141 VDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHD-LNQACRYASHLIALRE 219 (265)
T ss_pred cccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 667999999999999999999999999999999999999999999999876558899887554 5678899999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+++++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988765
No 418
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=318.35 Aligned_cols=219 Identities=24% Similarity=0.312 Sum_probs=172.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCc---eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGG---YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 378899987653 245899999999999999999999999999999999975431 2369999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.+... ..+++.++|++|++.+++. |++||+.+....+.. ...+...+.++++++.+++.+....... ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 2346779999999988875 999999987543211 1122234556778888887532111111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 899999999999999999999999999999999999999999999985 5899999999976 46778899999986 67
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 7777764
No 419
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.6e-34 Score=359.34 Aligned_cols=212 Identities=27% Similarity=0.434 Sum_probs=177.4
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+||+|+++. +++++|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 46999999998742 22468999999999999999999999999999999999865 357999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc------ccccccCCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL------RDALVGFPG 975 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg~~~ 975 (1427)
..+ ..+++.++||+|++.+++ .|++||+.++.. +.++ +.++++++..++.+. .||.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~-----~~~~----~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAAP-----NASD----EALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCCC-----ccCH----HHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 456788999999998876 599999987531 2222 346777888887654 46777654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
+..||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 46799999999999999999999999999999999999999999999885 4899999999986 3567999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 688888874
No 420
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=319.34 Aligned_cols=212 Identities=19% Similarity=0.261 Sum_probs=168.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++..+.+|+|+++|+++... ..++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 3699999999999999999999999999999999999753113489999999987643 23567999999987776 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+||+.++...++... .++ ....+++.+++.+||....... -++.
T Consensus 94 tv~eni~~~~~~~~~~~--------------------~~~-------------~~~~~~~~~l~~~~l~~~~~~~-~~~~ 139 (246)
T PRK14269 94 SIYENISYAPKLHGMIK--------------------NKD-------------EEEALVVDCLQKVGLFEEVKDK-LKQN 139 (246)
T ss_pred cHHHHhhhHHhhcCccc--------------------ChH-------------HHHHHHHHHHHHcCCChhhhHH-hcCC
Confidence 99999998654322100 000 0011256678888885321111 2345
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
.+.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.| ...++.+.+|++++|++
T Consensus 140 ~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~-~~tiii~tH-~~~~~~~~~d~i~~l~~ 216 (246)
T PRK14269 140 ALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS-H-NLSMIMVTH-NMQQGKRVADYTAFFHL 216 (246)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-C-CCEEEEEec-CHHHHHhhCcEEEEEEC
Confidence 56899999999999999999999999999999999999999999999985 3 789888655 45678889999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+.+++.
T Consensus 217 G~i~~~g~~~~~~ 229 (246)
T PRK14269 217 GELIEFGESKEFF 229 (246)
T ss_pred CEEEEECCHHHHH
Confidence 9999999988764
No 421
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=321.78 Aligned_cols=213 Identities=24% Similarity=0.320 Sum_probs=172.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.++++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 588999987662 24589999999999999999999999999999999997542 13579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++. ||+||+.+....+. ... ...+.++++++.+++.+ ..+..+
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~-- 178 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSSG-- 178 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCCc--
Confidence 87532 2346789999999888875 99999988654321 122 23456788999998853 334333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEE-EE
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELL-LM 1052 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~-~l 1052 (1427)
..||||||||++||++|+.+|+||||||||+|||+.+...+.+.|+++++ ++|||+++|++. .+...+|+++ +|
T Consensus 179 ---~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 179 ---LDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 58999999999999999999999999999999999999999999999976 489999999975 4667899976 56
Q ss_pred ecCcEEEEccCC
Q 000555 1053 KRGGRVIYGGKL 1064 (1427)
Q Consensus 1053 ~~gg~~~~~g~~ 1064 (1427)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 65 677777764
No 422
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.36 Aligned_cols=210 Identities=23% Similarity=0.348 Sum_probs=170.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999875 89999999887432 2346799999998788889
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||.||+.++...... . .. .... .....++.+++.+||++..++ .
T Consensus 101 tv~e~l~~~~~~~~~---~---~~-----------~~~~--------------~~~~~~~~~l~~~~l~~~~~~-----~ 144 (265)
T PRK10575 101 TVRELVAIGRYPWHG---A---LG-----------RFGA--------------ADREKVEEAISLVGLKPLAHR-----L 144 (265)
T ss_pred cHHHHHHhCcccccc---c---cc-----------CCCH--------------HHHHHHHHHHHHcCCHHHhcC-----C
Confidence 999999875310000 0 00 0000 001235678899999754444 3
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
+..|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|++++++.++|+|++.|+ .+++.+.||+|++|++
T Consensus 145 ~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~-~~~i~~~~d~i~~l~~ 223 (265)
T PRK10575 145 VDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHD-INMAARYCDYLVALRG 223 (265)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999999876558898887554 5678899999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+.+++.
T Consensus 224 G~i~~~~~~~~~~ 236 (265)
T PRK10575 224 GEMIAQGTPAELM 236 (265)
T ss_pred CeEEEecCHHHhc
Confidence 9999999988764
No 423
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.1e-33 Score=313.60 Aligned_cols=192 Identities=27% Similarity=0.426 Sum_probs=159.2
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcccccceEEEEccCCCCCCCCCH
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQSTFARISGYVEQNDIHSPQVTV 929 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv 929 (1427)
+++++|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 45679999999999999999999999999999999999765 358999999976421 1112334578999
Q ss_pred HHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000555 930 EESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1009 (1427)
Q Consensus 930 ~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgL 1009 (1427)
+||+.+..... ..+..+..+.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLL---GLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99998765432 1233444556788999999988877766 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 1010 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 1010 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
|+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999975 46678999999986 6776654
No 424
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-33 Score=319.78 Aligned_cols=211 Identities=21% Similarity=0.277 Sum_probs=169.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|. .+.+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 36999999999999999999999999999999999998642 13589999999987532 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ .||+||+.++....+... +. + ....++++++.++|.++.+..
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~----------~~----------~--------------~~~~~~~~l~~~~l~~~i~~~- 156 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD----------KK----------V--------------LDEIVETSLKQAALWDQVKDD- 156 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC----------HH----------H--------------HHHHHHHHHHHcCCCchhhhh-
Confidence 77 699999998643221100 00 0 011355678888885432222
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-++.++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. + +.|+|++.|+ .+++.++||+++
T Consensus 157 ~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~~tiii~tH~-~~~~~~~~d~i~ 233 (267)
T PRK14237 157 LHKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-K-NYTIIIVTHN-MQQAARASDYTA 233 (267)
T ss_pred hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-c-CCEEEEEecC-HHHHHHhcCEEE
Confidence 245567899999999999999999999999999999999999999999999984 3 6888887655 457889999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+.+++.
T Consensus 234 ~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 234 FFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999998874
No 425
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=317.09 Aligned_cols=202 Identities=25% Similarity=0.390 Sum_probs=167.6
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCHHHHHH
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTVRETFD 250 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV~E~l~ 250 (1427)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999875 899999999875432 2457999999998899999999998
Q ss_pred HHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChH
Q 000555 251 FAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGG 330 (1427)
Q Consensus 251 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 330 (1427)
++... .. . ... ....+++++++.+||++..++ .+..||||
T Consensus 94 ~~~~~-~~--~-------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~-----~~~~LS~G 133 (232)
T PRK10771 94 LGLNP-GL--K-------LNA-------------------------AQREKLHAIARQMGIEDLLAR-----LPGQLSGG 133 (232)
T ss_pred ccccc-cc--C-------CCH-------------------------HHHHHHHHHHHHcCcHHHHhC-----CcccCCHH
Confidence 75321 00 0 000 001235678899999754444 44579999
Q ss_pred HhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCeEEEec
Q 000555 331 QKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGHLVYQG 410 (1427)
Q Consensus 331 qkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~iv~~G 410 (1427)
|||||+||++++.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|+ ..++.+++|++++|++|++++.|
T Consensus 134 ~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~-~~~~~~~~d~i~~l~~g~i~~~g 212 (232)
T PRK10771 134 QRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHS-LEDAARIAPRSLVVADGRIAWDG 212 (232)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999876668899987554 55778899999999999999999
Q ss_pred ChHHHHH
Q 000555 411 PRAEVLE 417 (1427)
Q Consensus 411 ~~~~~~~ 417 (1427)
+.+++.+
T Consensus 213 ~~~~~~~ 219 (232)
T PRK10771 213 PTDELLS 219 (232)
T ss_pred CHHHHHh
Confidence 9887753
No 426
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2e-33 Score=316.85 Aligned_cols=206 Identities=26% Similarity=0.404 Sum_probs=171.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-ccceEEEEccCCCCCCCCCH
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-VQRTSAYISQTDNHIPELTV 245 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~~~~~~~lTV 245 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|. +|+|.++|.++.... .++.++|++|++.+++..|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999875 899999999875432 24679999999988888999
Q ss_pred HHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCC
Q 000555 246 RETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIR 325 (1427)
Q Consensus 246 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~ 325 (1427)
+||+.+..+..+.. ..+ ....++++++.+++....+ +.++
T Consensus 90 ~enl~~~~~~~~~~-----------~~~------------------------~~~~~~~~l~~~~l~~~~~-----~~~~ 129 (237)
T TIGR00968 90 RDNIAFGLEIRKHP-----------KAK------------------------IKARVEELLELVQLEGLGD-----RYPN 129 (237)
T ss_pred HHHHHhHHHhcCCC-----------HHH------------------------HHHHHHHHHHHcCCHhHhh-----CChh
Confidence 99998865432210 000 0012466788888864443 4456
Q ss_pred CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCCe
Q 000555 326 GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEGH 405 (1427)
Q Consensus 326 ~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G~ 405 (1427)
.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++.++.++|+|++.|++ .++.++||++++|++|+
T Consensus 130 ~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~-~~~~~~~d~i~~l~~g~ 208 (237)
T TIGR00968 130 QLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQ-EEAMEVADRIVVMSNGK 208 (237)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999998665578999976654 56788999999999999
Q ss_pred EEEecChHHHH
Q 000555 406 LVYQGPRAEVL 416 (1427)
Q Consensus 406 iv~~G~~~~~~ 416 (1427)
+++.|+.+++.
T Consensus 209 i~~~~~~~~~~ 219 (237)
T TIGR00968 209 IEQIGSPDEVY 219 (237)
T ss_pred EEEecCHHHHH
Confidence 99999988874
No 427
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=321.55 Aligned_cols=219 Identities=24% Similarity=0.304 Sum_probs=176.8
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.+.++|++++++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 579999998763 24689999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000555 903 YPKEQ----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSG 978 (1427)
Q Consensus 903 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 978 (1427)
.+... ..+++.++|++|++.+++ .|++||+.+..... ...+.++..+.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAH--KLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhc--cCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87542 234667999999988887 89999998764322 112334444566788899998653221111 12358
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEE
Q 000555 979 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRV 1058 (1427)
Q Consensus 979 LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~ 1058 (1427)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999975 56788999999986 688
Q ss_pred EEccCC
Q 000555 1059 IYGGKL 1064 (1427)
Q Consensus 1059 ~~~g~~ 1064 (1427)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 888764
No 428
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.1e-34 Score=315.56 Aligned_cols=200 Identities=30% Similarity=0.412 Sum_probs=158.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCC--CCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHI--PELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~--~~lT 244 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999876 999999998764 2456799999987653 3479
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+||+.++...... . ... ... .....++.+++.+||++..++ .+
T Consensus 87 v~e~l~~~~~~~~~---~---~~~-----------~~~--------------~~~~~~~~~l~~~~l~~~~~~-----~~ 130 (213)
T cd03235 87 VRDVVLMGLYGHKG---L---FRR-----------LSK--------------ADKAKVDEALERVGLSELADR-----QI 130 (213)
T ss_pred HHHHHHhccccccc---c---ccC-----------CCH--------------HHHHHHHHHHHHcCCHHHHhC-----Cc
Confidence 99999885321100 0 000 000 001235678899999754443 45
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.| ...++.++||++++|++|
T Consensus 131 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH-~~~~~~~~~d~i~~l~~~ 208 (213)
T cd03235 131 GELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTH-DLGLVLEYFDRVLLLNRT 208 (213)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeC-CHHHHHHhcCEEEEEcCc
Confidence 57999999999999999999999999999999999999999999999876 5889888755 456778899999999886
Q ss_pred eEEEec
Q 000555 405 HLVYQG 410 (1427)
Q Consensus 405 ~iv~~G 410 (1427)
+++.|
T Consensus 209 -~~~~g 213 (213)
T cd03235 209 -VVASG 213 (213)
T ss_pred -EeecC
Confidence 66544
No 429
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-34 Score=333.44 Aligned_cols=210 Identities=26% Similarity=0.383 Sum_probs=172.0
Q ss_pred ccccCCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEE
Q 000555 157 LRIFKPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYI 233 (1427)
Q Consensus 157 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv 233 (1427)
+++.++. ++.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++... .+++.++.+
T Consensus 342 vsF~y~~-~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl 417 (573)
T COG4987 342 VSFTYPG-QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVL 417 (573)
T ss_pred ceeecCC-CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhh
Confidence 3444443 2457999999999999999999999999999999999999986 99999999987654 356789999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCC--
Q 000555 234 SQTDNHIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGL-- 311 (1427)
Q Consensus 234 ~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL-- 311 (1427)
+|.. |+...|+|+||..+.. +..- +..-++++.+||
T Consensus 418 ~Qr~-hlF~~Tlr~NL~lA~~--------------------------~AsD---------------Eel~~aL~qvgL~~ 455 (573)
T COG4987 418 TQRV-HLFSGTLRDNLRLANP--------------------------DASD---------------EELWAALQQVGLEK 455 (573)
T ss_pred ccch-HHHHHHHHHHHhhcCC--------------------------CCCH---------------HHHHHHHHHcCHHH
Confidence 9976 5556799999988521 1000 012234444444
Q ss_pred -----ccccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecC
Q 000555 312 -----DLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQ 386 (1427)
Q Consensus 312 -----~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q 386 (1427)
++..||.+|+.+. .||||||||++|||+|+++.++++|||||.|||+.|+.++++.|.+-++ |+|+++++|+
T Consensus 456 l~~~~p~gl~t~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~--~kTll~vTHr 532 (573)
T COG4987 456 LLESAPDGLNTWLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE--GKTLLMVTHR 532 (573)
T ss_pred HHHhChhhhhchhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc--CCeEEEEecc
Confidence 3466788988765 5999999999999999999999999999999999999999999988654 8999998776
Q ss_pred CchhHHhhcCcEEEEeCCeEEEecChHHHHH
Q 000555 387 PPPETFDLFDDLLLLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 387 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 417 (1427)
-. -.+.||+|++|++|+++++|++++++.
T Consensus 533 L~--~le~~drIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 533 LR--GLERMDRIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred cc--cHhhcCEEEEEECCeeeecCCHHhhhc
Confidence 53 468999999999999999999999874
No 430
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-33 Score=322.40 Aligned_cols=210 Identities=23% Similarity=0.326 Sum_probs=171.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++. +...+|+|||++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999887641 23458999999999999999999999999999999999864 369999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGF------PGS 976 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 976 (1427)
.. ..+++.++||+|++.+++. |++||+.... ..+. +.+.+.++.++|.+..+...+. +++
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~------~~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYG------KWSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccchh-hHHHHhhhcc------CCCH----HHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 3456789999999999874 9999995321 1122 3456778888887655544321 134
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++|||||+.+|+||+|||||++||+.+...+++.|++.. .++|||+++|+++ ....+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-C
Confidence 6799999999999999999999999999999999999999999999875 4899999999974 3456999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 77888875
No 431
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.44 Aligned_cols=212 Identities=22% Similarity=0.300 Sum_probs=168.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|. .+.+|+|+++|+++... ..++.++|++|++..
T Consensus 32 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 111 (267)
T PRK14235 32 KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNP 111 (267)
T ss_pred EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCC
Confidence 35999999999999999999999999999999999998741 12489999999987531 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++. ||+||+.|+.+.++... . + .+ ....++++++.+||.+.....
T Consensus 112 ~~~-tv~enl~~~~~~~~~~~-~--------~----------~~--------------~~~~~~~~l~~~~l~~~~~~~- 156 (267)
T PRK14235 112 FPK-SIYENVAYGPRIHGLAR-S--------K----------AE--------------LDEIVETSLRKAGLWEEVKDR- 156 (267)
T ss_pred CCC-cHHHHHHHHHHhccccc-c--------h----------HH--------------HHHHHHHHHHHcCCchhhhHH-
Confidence 774 99999998754322100 0 0 00 011356678888885421111
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.|+ ..++.++||+++
T Consensus 157 ~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivtH~-~~~~~~~~d~v~ 233 (267)
T PRK14235 157 LHEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVTHS-MQQAARVSQRTA 233 (267)
T ss_pred hhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEEcC-HHHHHhhCCEEE
Confidence 1344667999999999999999999999999999999999999999999999854 6788887554 567788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|+++.+|+.+++.
T Consensus 234 ~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 234 FFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 432
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.3e-33 Score=350.70 Aligned_cols=219 Identities=21% Similarity=0.353 Sum_probs=179.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|...+++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 57888887652 24689999999999999999999999999999999997653224799999998764
Q ss_pred ccc----ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCc-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCC
Q 000555 907 QST----FARISGYVEQNDIHSPQVTVEESLWFSANLRLSK-EVSKNQRHEFVEEVMRLVELDSLR-DALVGFPGSSGLS 980 (1427)
Q Consensus 907 ~~~----~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 980 (1427)
... .++.+|||+|++.+++.+||+||+.+........ ....++..+.++++++.+++.+.. +..+ ..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 321 2356999999998999999999998864332111 122334456788999999997654 3444 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999975 46778999999986 57777
Q ss_pred ccCCC
Q 000555 1061 GGKLG 1065 (1427)
Q Consensus 1061 ~g~~~ 1065 (1427)
.|+..
T Consensus 222 ~~~~~ 226 (500)
T TIGR02633 222 TKDMS 226 (500)
T ss_pred ecCcc
Confidence 77664
No 433
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=317.60 Aligned_cols=215 Identities=24% Similarity=0.312 Sum_probs=171.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--Cc-eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--GG-YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 478999987653 2458999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++ .|++||+.+....+.. ...+...+.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999988888 6999999886543211 112222345667788877642 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 357999999999999999999999999999999999999999999999865 589999999986 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14255 222 T-GNLIEFADT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 677777764
No 434
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-33 Score=358.97 Aligned_cols=210 Identities=25% Similarity=0.358 Sum_probs=177.2
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
..++|+|++|.++. ++++|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46899999998741 23589999999999999999999999999999999998763 47999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000555 905 KEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS-------LRDALVGFP 974 (1427)
Q Consensus 905 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 974 (1427)
.++ ..+++.++||+|++.+++. |++||+.++. +.++ +.++++++.+|+.+ -.|+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~d----~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DISE----EQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4578899999999999885 9999998752 1222 33667777777653 346777653
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEec
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1054 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1054 (1427)
+.+||||||||++|||||+++|+||+||||||+||+.+++.+.+.|+++.+ ++|+|+++|+++ ....+|+|++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999998864 699999999974 5677999999985
Q ss_pred CcEEEEccCC
Q 000555 1055 GGRVIYGGKL 1064 (1427)
Q Consensus 1055 gg~~~~~g~~ 1064 (1427)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 788888875
No 435
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-33 Score=301.39 Aligned_cols=168 Identities=28% Similarity=0.441 Sum_probs=148.0
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ...+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 5778876552 2358999999999999999999999999999999999765 357999999987543
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 908 --STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
..+++.++|++|++.+++..|++||+. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998899999999863 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|++|||+|+.+|++++|||||+|||+.++..+.+.|++++++|.|+|+++|++. .+.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999975 566789999999875
No 436
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.08 Aligned_cols=213 Identities=24% Similarity=0.338 Sum_probs=169.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCc--c---cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDE--F---HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ .+.+|+|+++|+++.. . ..++.++|++|++.+
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (253)
T PRK14267 17 NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNP 96 (253)
T ss_pred eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCcc
Confidence 35999999999999999999999999999999999998762 1248999999998752 1 235679999999988
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.++....+... . . .+ ....++++++.+||...... .
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~-~--------~----------~~--------------~~~~~~~~l~~~~l~~~~~~-~ 142 (253)
T PRK14267 97 FPHLTIYDNVAIGVKLNGLVK-S--------K----------KE--------------LDERVEWALKKAALWDEVKD-R 142 (253)
T ss_pred CCCCcHHHHHHHHHHhcCccC-C--------H----------HH--------------HHHHHHHHHHHcCCccchhh-h
Confidence 999999999998654321100 0 0 00 01124567788887432111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-++.+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.|+ ..++.++||+|+
T Consensus 143 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~-~~~~~~~~d~i~ 219 (253)
T PRK14267 143 LNDYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVTHS-PAQAARVSDYVA 219 (253)
T ss_pred hccChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEECC-HHHHHhhCCEEE
Confidence 2345668999999999999999999999999999999999999999999999854 5888887554 567788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+++++.
T Consensus 220 ~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 220 FLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999998774
No 437
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=317.75 Aligned_cols=219 Identities=20% Similarity=0.249 Sum_probs=175.8
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--c-eeEEEEEEC
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 901 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 901 (1427)
..+..+++++++ +++.+|+|+|++++|||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 457777777654 235699999999999999999999999999999999997642 1 257999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000555 902 GYPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGS 976 (1427)
Q Consensus 902 g~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 976 (1427)
|.+... ..+++.++|++|++.++ .+|+.||+.+....+. . ..+..+.++++++.+++.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987532 23456799999998877 5999999998765431 1 12234568889999998643222221 123
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe---
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK--- 1053 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~--- 1053 (1427)
+.||||||||++|||||+++|++|+|||||+|||+.+...+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5799999999999999999999999999999999999999999999985 4799999999986 4778899999996
Q ss_pred ----cCcEEEEccCC
Q 000555 1054 ----RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ----~gg~~~~~g~~ 1064 (1427)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 35788888874
No 438
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.4e-33 Score=366.05 Aligned_cols=208 Identities=23% Similarity=0.409 Sum_probs=170.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc---ccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~l 243 (1427)
.++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++.. .++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 46999999999999999999999999999999999999986 999999999987653 5789999999987665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|++|||.++... . . +.++.+..+.+ ..++.++ .|++..||.+|+.+
T Consensus 554 TI~eNi~~~~~~--~---~------------------~~~i~~a~~~~---------~l~~~i~--~lp~gl~T~i~e~G 599 (694)
T TIGR03375 554 TLRDNIALGAPY--A---D------------------DEEILRAAELA---------GVTEFVR--RHPDGLDMQIGERG 599 (694)
T ss_pred hHHHHHhCCCCC--C---C------------------HHHHHHHHHHc---------ChHHHHH--hCcccccceecCCC
Confidence 999999875210 0 0 01111111111 0122222 35667899999876
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
. +||||||||++||||++.+|++++||||||+||+.++.+|.+.|+++.+ ++|+|++.|++ ++.+.||+|++|++
T Consensus 600 ~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~--~~T~iiItHrl--~~~~~~D~iivl~~ 674 (694)
T TIGR03375 600 R-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA--GKTLVLVTHRT--SLLDLVDRIIVMDN 674 (694)
T ss_pred C-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC--CCEEEEEecCH--HHHHhCCEEEEEeC
Confidence 4 6999999999999999999999999999999999999999999998753 78988877765 56789999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|+++++|+++++.+
T Consensus 675 G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 675 GRIVADGPKDQVLE 688 (694)
T ss_pred CEEEeeCCHHHHHH
Confidence 99999999999875
No 439
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.97 Aligned_cols=218 Identities=25% Similarity=0.395 Sum_probs=173.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 588999987662 12468999999999999999999999999999999999865 3579999999876
Q ss_pred CcccccceEEEEccCCCCC--CCCCHHHHHHHHHhccCC-cCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 906 EQSTFARISGYVEQNDIHS--PQVTVEESLWFSANLRLS-KEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 906 ~~~~~~~~~gyv~Q~~~~~--~~lTv~e~l~~~~~l~~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
.....++.++|++|++.+. ...+++|++.+....... .........+.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997542 235788888653210000 01111223455788899999988877766 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||||++||+||+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999975 577889999777 5 6888887
Q ss_pred CCC
Q 000555 1063 KLG 1065 (1427)
Q Consensus 1063 ~~~ 1065 (1427)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 753
No 440
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.3e-33 Score=313.66 Aligned_cols=195 Identities=23% Similarity=0.385 Sum_probs=160.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCc-----ccccceEEEEccCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDE-----FHVQRTSAYISQTDNHIP 241 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~-----~~~~~~~~yv~Q~~~~~~ 241 (1427)
.++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. ...++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 46999999999999999999999999999999999999875 9999999998742 123567999999998888
Q ss_pred CCCHHHHHHHHHH-hcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 242 ELTVRETFDFAAR-WQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 242 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
.+||+||+.++.. .++.. .. +....++.+++.+||++..+.
T Consensus 90 ~~t~~e~l~~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 131 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS-----------KA------------------------EAEERALELLEKVGLADKADA--- 131 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCCHhHhhh---
Confidence 8999999988642 11100 00 001135667888898754443
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++. |...++.++||++++
T Consensus 132 --~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~s-h~~~~~~~~~d~i~~ 207 (213)
T cd03262 132 --YPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVVT-HEMGFAREVADRVIF 207 (213)
T ss_pred --CccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhCCEEEE
Confidence 4567999999999999999999999999999999999999999999999875 478988865 555678889999999
Q ss_pred EeCCeE
Q 000555 401 LSEGHL 406 (1427)
Q Consensus 401 L~~G~i 406 (1427)
|++|++
T Consensus 208 l~~g~i 213 (213)
T cd03262 208 MDDGRI 213 (213)
T ss_pred EeCCcC
Confidence 999974
No 441
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.3e-33 Score=350.46 Aligned_cols=211 Identities=21% Similarity=0.352 Sum_probs=179.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478999988763 2468999999999999999999999999999999999865 3579999999875
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQS---T-FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
... . .++.+||++|++.+++.+||+|++.+.... ..+.++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 124589999999999999999999875311 1233456889999999988777766 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999975 46778999999986 677888
Q ss_pred cCCC
Q 000555 1062 GKLG 1065 (1427)
Q Consensus 1062 g~~~ 1065 (1427)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8764
No 442
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5.6e-33 Score=316.58 Aligned_cols=220 Identities=24% Similarity=0.335 Sum_probs=174.5
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 478999987652 2358999999999999999999999999999999999621113579999999875
Q ss_pred Ccc---cccc-eEEEEccCCCCCCCCCHHHHHHHHHhccCC----cCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000555 906 EQS---TFAR-ISGYVEQNDIHSPQVTVEESLWFSANLRLS----KEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGS 976 (1427)
Q Consensus 906 ~~~---~~~~-~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 976 (1427)
... ..++ .++|++|++.+++.+|+.+++.+....... ......+..+.++++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998875432110 0111223345678889999996 34555442
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hceEEEEecC
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRG 1055 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~g 1055 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|+++. +... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999988779999999999753 4444 799999975
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 688888875
No 443
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.4e-33 Score=313.55 Aligned_cols=204 Identities=21% Similarity=0.343 Sum_probs=167.4
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.+. ++++|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478999987652 3468999999999999999999999999999999999754 3579999999865
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000555 906 EQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.++|++|++.+++ .|++||+.+....+.. . ...+.++++++.+++. ...+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 224567899999988887 4999999876443211 1 1124567899999995 4555554 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEEe-cCcE
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMK-RGGR 1057 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~-~gg~ 1057 (1427)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.+ .|.|||+++|++. .+ +.+|++++|+ ++|+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~ 216 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGE 216 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccch
Confidence 999999999999999999999999999999999999999999876 4899999999976 34 5699999995 4444
No 444
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=320.74 Aligned_cols=215 Identities=23% Similarity=0.252 Sum_probs=171.2
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 489999988663 2358999999999999999999999999999999999753 1 13589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.++|++|++.+++ .||+||+.+....+ ...+.....+.+.+.++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIH--GIKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 234567999999988887 49999998865332 1111222334567777776542 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 358999999999999999999999999999999999999999999999865 799999999975 4677899999998
Q ss_pred cCcEEEEccCC
Q 000555 1054 RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~gg~~~~~g~~ 1064 (1427)
+ |+++..|+.
T Consensus 241 ~-G~i~~~g~~ 250 (271)
T PRK14238 241 N-GYVNEYDDT 250 (271)
T ss_pred C-CEEEEeCCH
Confidence 6 677777764
No 445
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=318.07 Aligned_cols=212 Identities=21% Similarity=0.272 Sum_probs=168.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|+++ |..+.+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3212489999999987431 235679999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.++.+..+.. . .. + ....++++++.+|+.......
T Consensus 97 ~~~~tv~enl~~~~~~~~~~--~--------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~- 141 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRV--N--------RS----------E--------------ADEIVESSLKRVALWDEVKDR- 141 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCC--C--------HH----------H--------------HHHHHHHHHHHcCCchhhhHH-
Confidence 99999999998764322110 0 00 0 011356678888875311111
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.|+ ..++.++||+++
T Consensus 142 ~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivsH~-~~~~~~~~d~i~ 218 (252)
T PRK14256 142 LKSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVTHN-MQQAARVSDYTA 218 (252)
T ss_pred hhCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEECC-HHHHHhhCCEEE
Confidence 1234667999999999999999999999999999999999999999999999864 5788886554 567789999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|+++..|+.+++.
T Consensus 219 ~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 219 FFYMGDLVECGETKKIF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 446
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.48 Aligned_cols=209 Identities=22% Similarity=0.270 Sum_probs=167.8
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEECCeecCcccc-cceEEEEccCCC--CCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSL-KKSGNITYNGYKLDEFHV-QRTSAYISQTDN--HIPEL 243 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~~~--~~~~l 243 (1427)
++|+|+|+++++||+++|+||||||||||+++|+|.++|.. +.+|+|.++|++++.... ++.++||+|++. +.+..
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999998721 148999999998754333 357999999874 44567
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
|+.+++.+.++..+.. . ....++++++.+||.+.. + .-+..
T Consensus 97 ~~~~~~~~~~~~~~~~-----------~--------------------------~~~~~~~~l~~~~l~~~~-~-~~~~~ 137 (254)
T PRK10418 97 TMHTHARETCLALGKP-----------A--------------------------DDATLTAALEAVGLENAA-R-VLKLY 137 (254)
T ss_pred cHHHHHHHHHHHcCCC-----------h--------------------------HHHHHHHHHHHcCCCChh-h-hhhcC
Confidence 9999987654322110 0 001356788888986410 1 12344
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|++++++.|+|||++.|+ ..++.+.+|++++|++
T Consensus 138 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~-~~~~~~~~d~v~~l~~ 216 (254)
T PRK10418 138 PFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHD-MGVVARLADDVAVMSH 216 (254)
T ss_pred CcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecC-HHHHHHhCCEEEEEEC
Confidence 567999999999999999999999999999999999999999999999876668899987554 5667789999999999
Q ss_pred CeEEEecChHHHH
Q 000555 404 GHLVYQGPRAEVL 416 (1427)
Q Consensus 404 G~iv~~G~~~~~~ 416 (1427)
|++++.|+.+++.
T Consensus 217 G~i~~~~~~~~~~ 229 (254)
T PRK10418 217 GRIVEQGDVETLF 229 (254)
T ss_pred CEEEEecCHHHHh
Confidence 9999999998874
No 447
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=318.50 Aligned_cols=210 Identities=19% Similarity=0.282 Sum_probs=167.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC---CCCCCceeEEEECCeecCcc-----cccceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKL---DSSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~---~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~ 238 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.. ++. +.+|+|.++|+++... ..++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 45999999999999999999999999999999999973 331 2489999999987532 23567999999987
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
+++ .||+||+.++.+..+... . + .....++++++.+||.+...+.
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~--~---------~-----------------------~~~~~~~~~l~~~~l~~~~~~~ 139 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD--N---------A-----------------------FIRQRVEETLKGAALWDEVKDK 139 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc--H---------H-----------------------HHHHHHHHHHHHcCCCcchhhh
Confidence 776 699999998754322100 0 0 0011356778888886432222
Q ss_pred cccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcE
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDL 398 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~v 398 (1427)
. +..++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|||++.|+ ..++.++||++
T Consensus 140 ~-~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~-~~tiiivtH~-~~~~~~~~d~v 215 (250)
T PRK14245 140 L-KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-K-DYTIVIVTHN-MQQAARVSDKT 215 (250)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEeCC-HHHHHhhCCEE
Confidence 2 34566799999999999999999999999999999999999999999999984 3 6888886554 56778999999
Q ss_pred EEEeCCeEEEecChHHHH
Q 000555 399 LLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 399 ilL~~G~iv~~G~~~~~~ 416 (1427)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 216 AFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999999875
No 448
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3e-33 Score=317.15 Aligned_cols=212 Identities=26% Similarity=0.311 Sum_probs=167.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECCeecCccc----ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKL--DSSLKKSGNITYNGYKLDEFH----VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .+..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 454 899999999875432 123489999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcc-cccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDL-CSETVV 319 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~t~v 319 (1427)
+.+|++|++.+..+........ ... +. .+....++.+++.+||+. ..+
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~~~----~~~-------------~~-----------~~~~~~~~~~l~~~~l~~~~~~--- 138 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSARGE----EPL-------------DL-----------LDFLKLLKAKLALLGMDEEFLN--- 138 (243)
T ss_pred CCcCHHHHHHHHHHHhhccccc----ccc-------------cH-----------HHHHHHHHHHHHHcCCchhhcc---
Confidence 9999999998864322100000 000 00 000123677899999963 333
Q ss_pred ccccCC-CCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhh-cCc
Q 000555 320 GNDMIR-GVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDL-FDD 397 (1427)
Q Consensus 320 g~~~~~-~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~-~D~ 397 (1427)
+.+. .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|||++.|+ ..++... ||+
T Consensus 139 --~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH~-~~~~~~~~~d~ 214 (243)
T TIGR01978 139 --RSVNEGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITHY-QRLLNYIKPDY 214 (243)
T ss_pred --cccccCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEec-HHHHHhhcCCe
Confidence 3333 4999999999999999999999999999999999999999999999865 57899887655 4566677 899
Q ss_pred EEEEeCCeEEEecChHHHH
Q 000555 398 LLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 398 vilL~~G~iv~~G~~~~~~ 416 (1427)
+++|++|++++.|+++++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 215 VHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEEEeCCEEEEecCHHHhc
Confidence 9999999999999988654
No 449
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=349.47 Aligned_cols=216 Identities=27% Similarity=0.356 Sum_probs=179.0
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
.++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 378899987663 2458999999999999999999999999999999999865 3579999999875
Q ss_pred Cc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 906 EQ----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 906 ~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
.. ..+++.+||++|++.+++.+||+||+.+.............+..+.++++++.++|.+..+..+ ..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCH
Confidence 42 1235679999999999999999999988532111111223344567889999999987766665 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEc
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYG 1061 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~ 1061 (1427)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++...+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999976 56778999999986 566655
Q ss_pred cC
Q 000555 1062 GK 1063 (1427)
Q Consensus 1062 g~ 1063 (1427)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 54
No 450
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=323.98 Aligned_cols=209 Identities=28% Similarity=0.423 Sum_probs=173.0
Q ss_pred cceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCC
Q 000555 166 SLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPE 242 (1427)
Q Consensus 166 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~ 242 (1427)
.+++|+||||++.||+.+|++||||+||||+|++|....+-+ +|.|+++|++++.. ..|+.||.|||+..+|.
T Consensus 550 ~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN- 625 (790)
T KOG0056|consen 550 GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN- 625 (790)
T ss_pred CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec-
Confidence 467999999999999999999999999999999999998865 99999999998654 46789999999887665
Q ss_pred CCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 243 LTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 243 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
.|+..||.|+. +. . .++++.+..||+. ..| ++++.++..+|.||++
T Consensus 626 dTI~yNIryak----~~-A------------------sneevyaAAkAA~--------IHd---rIl~fPegY~t~VGER 671 (790)
T KOG0056|consen 626 DTILYNIRYAK----PS-A------------------SNEEVYAAAKAAQ--------IHD---RILQFPEGYNTRVGER 671 (790)
T ss_pred ceeeeheeecC----CC-C------------------ChHHHHHHHHHhh--------HHH---HHhcCchhhhhhhhhc
Confidence 59999999862 10 0 1122222222221 112 4678999999999999
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
+.+ |||||||||+|||+++..|.|++|||.||+||..+.++|..+|.+++.. .+|||++ |. -.+.-.+|.|++++
T Consensus 672 GLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~-RTtIVvA-HR--LSTivnAD~ILvi~ 746 (790)
T KOG0056|consen 672 GLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCAN-RTTIVVA-HR--LSTIVNADLILVIS 746 (790)
T ss_pred ccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcC-CceEEEe-ee--ehheecccEEEEEe
Confidence 997 9999999999999999999999999999999999999999999999863 4455554 43 35666899999999
Q ss_pred CCeEEEecChHHHHH
Q 000555 403 EGHLVYQGPRAEVLE 417 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~~ 417 (1427)
+|+|++.|.++|++.
T Consensus 747 ~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 747 NGRIVERGRHEELLK 761 (790)
T ss_pred CCeEeecCcHHHHHh
Confidence 999999999999975
No 451
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=319.99 Aligned_cols=211 Identities=19% Similarity=0.303 Sum_probs=166.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|++|++||+++|+||||||||||+++|+|.++ |+.+.+|+|+++|+++... ..++.++|++|++.+
T Consensus 25 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 104 (259)
T PRK14274 25 HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNP 104 (259)
T ss_pred eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCcc
Confidence 359999999999999999999999999999999999986 3222489999999987421 235679999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++. ||+||+.|+.+..+... +.+ ...+++.+++.+|+.+.....
T Consensus 105 ~~~-tv~enl~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~- 148 (259)
T PRK14274 105 FPQ-SIFDNVAYGPRIHGTKN----------KKK------------------------LQEIVEKSLKDVALWDEVKDR- 148 (259)
T ss_pred ccc-CHHHHHHhHHHhcCCCC----------HHH------------------------HHHHHHHHHHHcCCchhhhhh-
Confidence 775 99999988644322100 000 011245677777875321111
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+...++||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. + ++|+|++.|+ ..++.++||+++
T Consensus 149 l~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~~tiiivtH~-~~~~~~~~d~i~ 225 (259)
T PRK14274 149 LHTQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK-E-KYTIVIVTHN-MQQAARVSDQTA 225 (259)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-c-CCEEEEEEcC-HHHHHHhCCEEE
Confidence 134566899999999999999999999999999999999999999999999985 3 6888887555 567788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|+++.+|+++++.
T Consensus 226 ~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 226 FFYMGELVECNDTNKMF 242 (259)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999999874
No 452
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.8e-33 Score=319.10 Aligned_cols=224 Identities=25% Similarity=0.356 Sum_probs=178.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+.... . .+ ...++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~-~--~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG-L--SG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc-c--cc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 68889987663100 0 00 0013569999999999999999999999999999999999765 35899999998754
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 QS------TFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~~------~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
.. ..++.++|++|++ .+.+..|+.|++.+..... ......+....++++++.+++. ...+..+ .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 21 2456799999997 3667899999987653211 1123344455788999999996 4556554 5
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999975 46678999999985 6
Q ss_pred EEEEccCCC
Q 000555 1057 RVIYGGKLG 1065 (1427)
Q Consensus 1057 ~~~~~g~~~ 1065 (1427)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 888888754
No 453
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-34 Score=305.69 Aligned_cols=196 Identities=27% Similarity=0.410 Sum_probs=171.2
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc-------ccceEEEEccCCCCCCCCC
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH-------VQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~~~~~~~lT 244 (1427)
++++..+.-.+|||-|+||||||||+|+|+|+.+|+ +|.|.+||..+.+.. -+|.+|||+|+..+||.+|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775799999999999999999999999987 999999998764321 2688999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|+-||.|+...-. ....|++...||+++.. ++++
T Consensus 93 VrgNL~YG~~~~~-----------------------------------------~~~fd~iv~lLGI~hLL-----~R~P 126 (352)
T COG4148 93 VRGNLRYGMWKSM-----------------------------------------RAQFDQLVALLGIEHLL-----DRYP 126 (352)
T ss_pred Eecchhhhhcccc-----------------------------------------hHhHHHHHHHhCcHHHH-----hhCC
Confidence 9999999753210 11257789999998744 4567
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.++.+.-|+.+ +|-..|+.+++|+|++|++|
T Consensus 127 ~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYV-SHS~~Ev~RLAd~vV~le~G 205 (352)
T COG4148 127 GTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYV-SHSLDEVLRLADRVVVLENG 205 (352)
T ss_pred CccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEE-ecCHHHHHhhhheEEEecCC
Confidence 78999999999999999999999999999999999999999999999998888888885 56678999999999999999
Q ss_pred eEEEecChHHHHH
Q 000555 405 HLVYQGPRAEVLE 417 (1427)
Q Consensus 405 ~iv~~G~~~~~~~ 417 (1427)
++...|+.+++..
T Consensus 206 kV~A~g~~e~v~~ 218 (352)
T COG4148 206 KVKASGPLEEVWG 218 (352)
T ss_pred eEEecCcHHHHhc
Confidence 9999999999864
No 454
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=318.27 Aligned_cols=211 Identities=24% Similarity=0.337 Sum_probs=166.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 97 (252)
T PRK14239 18 KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNP 97 (252)
T ss_pred eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCcc
Confidence 359999999999999999999999999999999999853 4222489999999987421 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ .||+||+.++....+... . .. ....++.+++.+++.....+ .
T Consensus 98 ~~-~tv~enl~~~~~~~~~~~--~------------------~~--------------~~~~~~~~l~~~~l~~~~~~-~ 141 (252)
T PRK14239 98 FP-MSIYENVVYGLRLKGIKD--K------------------QV--------------LDEAVEKSLKGASIWDEVKD-R 141 (252)
T ss_pred Cc-CcHHHHHHHHHHHcCCCc--H------------------HH--------------HHHHHHHHHHHcCCchhHHH-H
Confidence 76 899999998754322100 0 00 01124556777777432111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-++.++.|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.|+ .+++.+.||+++
T Consensus 142 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~-~~~~~~~~d~i~ 218 (252)
T PRK14239 142 LHDSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVTRS-MQQASRISDRTG 218 (252)
T ss_pred HhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEECC-HHHHHHhCCEEE
Confidence 2445668999999999999999999999999999999999999999999999854 5788886554 567889999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+.+++.
T Consensus 219 ~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 219 FFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999998874
No 455
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.1e-33 Score=319.25 Aligned_cols=210 Identities=27% Similarity=0.434 Sum_probs=161.3
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++. .++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehH
Confidence 357788765521 12468999999999999999999999999999999999865 35799999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHH-----HHHHHHHHc--CCcccccccccCCCC
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHE-----FVEEVMRLV--ELDSLRDALVGFPGS 976 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~vg~~~~ 976 (1427)
. ..+++.++|++|++.+++ .||+||+.+... ........+ ..++.++.+ ++....+.. +
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~ 136 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----G 136 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----C
Confidence 2 234567999999987765 699999976421 111111110 112233333 333333332 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. +|+|||+++|++. .+ ..+|++++|++ |
T Consensus 137 ~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G 212 (237)
T cd03252 137 AGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-G 212 (237)
T ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-C
Confidence 5899999999999999999999999999999999999999999999986 4899999999986 34 56999999986 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 213 ~i~~~~~~ 220 (237)
T cd03252 213 RIVEQGSH 220 (237)
T ss_pred EEEEEcCH
Confidence 78887764
No 456
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=319.48 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=172.6
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG---GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 902 (1427)
.+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 589999988663 24689999999999999999999999999999999997431 12479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD----SLRDALVGF 973 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 973 (1427)
.+... ..+++.++|++|+..+++. ||.||+.+....+. .. ....+.+++.++.+++. +..+..
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87532 2345679999999888875 99999987643321 11 12234466778887764 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++|||||+.+|++|||||||+|||+.+...+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 357999999999999999999999999999999999999999999999865 799999999986 5778899999997
Q ss_pred --------cCcEEEEccCC
Q 000555 1054 --------RGGRVIYGGKL 1064 (1427)
Q Consensus 1054 --------~gg~~~~~g~~ 1064 (1427)
+.|++++.|+.
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 24788888875
No 457
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=320.31 Aligned_cols=208 Identities=25% Similarity=0.405 Sum_probs=169.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++... ..++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999875 89999999886532 2345799999998888889
Q ss_pred CHHHHHHHHHH-hcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 244 TVRETFDFAAR-WQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 244 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
||.||+.++.. .... ..... ......++++++.+||++..++
T Consensus 92 tv~~~i~~~~~~~~~~-------~~~~~-------------------------~~~~~~~~~~l~~~~l~~~~~~----- 134 (255)
T PRK11231 92 TVRELVAYGRSPWLSL-------WGRLS-------------------------AEDNARVNQAMEQTRINHLADR----- 134 (255)
T ss_pred cHHHHHHhccchhhhh-------ccCCC-------------------------HHHHHHHHHHHHHcCCHHHHcC-----
Confidence 99999988521 0000 00000 0001235678888999754444
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.+++|++++|+
T Consensus 135 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~~tiii~tH~-~~~~~~~~d~i~~l~ 212 (255)
T PRK11231 135 RLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QGKTVVTVLHD-LNQASRYCDHLVVLA 212 (255)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEECC-HHHHHHhcCEEEEEE
Confidence 4567999999999999999999999999999999999999999999999865 48898887554 567889999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++..|+.+++.
T Consensus 213 ~G~i~~~~~~~~~~ 226 (255)
T PRK11231 213 NGHVMAQGTPEEVM 226 (255)
T ss_pred CCeEEEEcCHHHhc
Confidence 99999999988764
No 458
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.4e-33 Score=305.45 Aligned_cols=179 Identities=27% Similarity=0.351 Sum_probs=151.0
Q ss_pred cceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc-----ccccceEEEEccCCC-CC
Q 000555 851 KLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ-----STFARISGYVEQNDI-HS 924 (1427)
Q Consensus 851 ~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~~~-~~ 924 (1427)
++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .+
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3568999999999999999999999999999999999865 358999999987531 134567999999973 33
Q ss_pred CCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000555 925 PQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDE 1004 (1427)
Q Consensus 925 ~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDE 1004 (1427)
...||+||+.+..... ..+.++..+.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998865322 2233444556889999999988777765 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000555 1005 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1039 (1427)
Q Consensus 1005 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1039 (1427)
||+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999974
No 459
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=318.29 Aligned_cols=210 Identities=22% Similarity=0.319 Sum_probs=165.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCc-----ccccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDE-----FHVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~-----~~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|++|++||+++|+||||||||||+++|+|.+++. .+.+|+|.++|+++.. ...++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 35999999999999999999999999999999999997631 0248999999988642 1235679999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ .||+||+.++....+.. . + .+..++.+++.+++....+. .
T Consensus 106 ~~-~tv~enl~~~~~~~~~~-------~---------------~--------------~~~~~~~~l~~~~l~~~l~~-~ 147 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYT-------G---------------D--------------MDELVERSLRKAAVWDECKD-K 147 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCc-------H---------------H--------------HHHHHHHHHHHhCCcchhhh-h
Confidence 77 49999999875432210 0 0 00123456677766421111 2
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.| ...++.++||+++
T Consensus 148 ~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiivtH-~~~~~~~~~d~i~ 224 (269)
T PRK14259 148 LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIVTH-NMQQAVRVSDMTA 224 (269)
T ss_pred hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeC-CHHHHHHhcCEEE
Confidence 2445668999999999999999999999999999999999999999999999843 688888655 4568889999999
Q ss_pred EEeC-----------CeEEEecChHHHHH
Q 000555 400 LLSE-----------GHLVYQGPRAEVLE 417 (1427)
Q Consensus 400 lL~~-----------G~iv~~G~~~~~~~ 417 (1427)
+|++ |++++.|+++++.+
T Consensus 225 ~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 225 FFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEeccccccccccccceEEEeCCHHHHHh
Confidence 9996 67899999998853
No 460
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=297.33 Aligned_cols=209 Identities=23% Similarity=0.373 Sum_probs=182.8
Q ss_pred ccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCC
Q 000555 165 HSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 165 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 244 (1427)
.++++++|+||.++||+|++++|||||||||.+++|+|++.|+ +|+|+++|.+++.. .+.+|||.|.+.-+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhh-hhhhcccChhhhccCccCc
Confidence 4578999999999999999999999999999999999999986 99999999987543 4567999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
|.|.|.|-++++|.+. . +.....+..|+.+++.... .+.+
T Consensus 89 v~dql~yla~LkGm~~--~---------------------------------e~~~~~~~wLer~~i~~~~-----~~kI 128 (300)
T COG4152 89 VEDQLKYLAELKGMPK--A---------------------------------EIQKKLQAWLERLEIVGKK-----TKKI 128 (300)
T ss_pred HHHHHHHHHHhcCCcH--H---------------------------------HHHHHHHHHHHhccccccc-----cchH
Confidence 9999999999988621 0 1122366788888886432 3456
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..||.|.+|++.+-.+++++|++++||||+|||||-+++.+-+.+.++. ..|.|||.|. |.+..+.++||++++|++|
T Consensus 129 k~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk-~~GatIifSs-H~Me~vEeLCD~llmL~kG 206 (300)
T COG4152 129 KELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELK-EEGATIIFSS-HRMEHVEELCDRLLMLKKG 206 (300)
T ss_pred HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHH-hcCCEEEEec-chHHHHHHHhhhhheecCC
Confidence 7899999999999999999999999999999999999999999999985 4699999985 5688999999999999999
Q ss_pred eEEEecChHHHHHHH
Q 000555 405 HLVYQGPRAEVLEFF 419 (1427)
Q Consensus 405 ~iv~~G~~~~~~~~f 419 (1427)
+.|.+|+.+++...|
T Consensus 207 ~~V~~G~v~~ir~~~ 221 (300)
T COG4152 207 QTVLYGTVEDIRRSF 221 (300)
T ss_pred ceEEeccHHHHHHhc
Confidence 999999999998743
No 461
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=318.49 Aligned_cols=212 Identities=23% Similarity=0.319 Sum_probs=168.3
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCeecCc-----ccccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSL--KKSGNITYNGYKLDE-----FHVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-----~~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|+++++||+++|+|||||||||||++|+|.++|.. +.+|+|.++|+++.. ...++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 359999999999999999999999999999999999986421 248999999988742 1235679999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.++....+.. ... + ....++.+++.+||...... .
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~----------~~~----------~--------------~~~~~~~~l~~~~l~~~~~~-~ 141 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVR----------NKK----------D--------------LDELVEKSLRGANLWNEVKD-R 141 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------CHH----------H--------------HHHHHHHHHHHcCCchhhhh-H
Confidence 99999999998875432110 000 0 01135667888887421111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.| ...++.++||+|+
T Consensus 142 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviivsH-~~~~~~~~~d~i~ 218 (258)
T PRK14241 142 LDKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIVTH-NMQQAARVSDQTA 218 (258)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEec-CHHHHHHhCCEEE
Confidence 1345667999999999999999999999999999999999999999999999853 578888655 4567889999999
Q ss_pred EEe------CCeEEEecChHHHH
Q 000555 400 LLS------EGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~------~G~iv~~G~~~~~~ 416 (1427)
+|+ +|++++.|+++++.
T Consensus 219 ~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 219 FFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEecccCCCCceEEecCCHHHHH
Confidence 997 79999999998874
No 462
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.2e-33 Score=308.50 Aligned_cols=197 Identities=27% Similarity=0.361 Sum_probs=164.6
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|++..++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 67888886552 2458999999999999999999999999999999999765 35799999998753
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000555 907 QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKR 986 (1427)
Q Consensus 907 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqr 986 (1427)
...+++.++|++|++.+++.+||+||+.+...... .. .+.++++++.++|.+..+..+ ..||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22256678999999888899999999987654321 11 234788999999987666655 4799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 987 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 987 l~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++ .. |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 99999999999999999999999999999999999998778999999999975 33 33 8887774
No 463
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.09 Aligned_cols=210 Identities=21% Similarity=0.334 Sum_probs=165.8
Q ss_pred eeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCeecCcc-----cccceEEEEccCCCCC
Q 000555 168 TILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDS--SLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNHI 240 (1427)
Q Consensus 168 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~~ 240 (1427)
++|+|+|+++++||+++|+||||||||||+++|+|..++ ..+.+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 212489999999987531 2356799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+ +||+||+.++....+... . .+ ....++++++.+++.+.... .-
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~--~------------------~~--------------~~~~~~~~l~~~~l~~~l~~-~~ 140 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKD--K------------------KK--------------LDEIVEKSLKGAALWDEVKD-RL 140 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCC--H------------------HH--------------HHHHHHHHHHHcCCchhhHH-HH
Confidence 7 899999998754332100 0 00 01124556677776421111 11
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
++.+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. + ++|+|++.|+ ..++.+.+|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~~tiii~sH~-~~~~~~~~d~v~~ 217 (250)
T PRK14240 141 KKSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-K-DYTIVIVTHN-MQQASRISDKTAF 217 (250)
T ss_pred hcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEEeC-HHHHHhhCCEEEE
Confidence 34566899999999999999999999999999999999999999999999984 3 6898887554 5678889999999
Q ss_pred EeCCeEEEecChHHHH
Q 000555 401 LSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 401 L~~G~iv~~G~~~~~~ 416 (1427)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 218 FLNGEIVEFGDTVDLF 233 (250)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988764
No 464
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.7e-33 Score=318.49 Aligned_cols=208 Identities=28% Similarity=0.417 Sum_probs=169.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999999875 89999999987543 2345699999998778889
Q ss_pred CHHHHHHHHHH-hcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccc
Q 000555 244 TVRETFDFAAR-WQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGND 322 (1427)
Q Consensus 244 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~ 322 (1427)
||+||+.++.. .... .. .+.. ....+++++++.+||.+..+ +
T Consensus 91 tv~e~l~~~~~~~~~~-------~~-----------~~~~--------------~~~~~~~~~l~~~~l~~~~~-----~ 133 (256)
T TIGR03873 91 TVRDVVALGRIPHRSL-------WA-----------GDSP--------------HDAAVVDRALARTELSHLAD-----R 133 (256)
T ss_pred CHHHHHHhcchhhhhh-------cc-----------CCCH--------------HHHHHHHHHHHHcCcHhhhc-----C
Confidence 99999988521 0000 00 0000 00123567888899865433 4
Q ss_pred cCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEe
Q 000555 323 MIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLS 402 (1427)
Q Consensus 323 ~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~ 402 (1427)
.+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|+ ..++.++||+|++|+
T Consensus 134 ~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~ 211 (256)
T TIGR03873 134 DMSTLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAALHD-LNLAASYCDHVVVLD 211 (256)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCC-HHHHHHhCCEEEEEe
Confidence 4567999999999999999999999999999999999999999999999864 47898887554 567789999999999
Q ss_pred CCeEEEecChHHHH
Q 000555 403 EGHLVYQGPRAEVL 416 (1427)
Q Consensus 403 ~G~iv~~G~~~~~~ 416 (1427)
+|+++..|+.+++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 212 GGRVVAAGPPREVL 225 (256)
T ss_pred CCCEEEecCHHHhh
Confidence 99999999988764
No 465
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-33 Score=310.07 Aligned_cols=192 Identities=27% Similarity=0.410 Sum_probs=159.7
Q ss_pred CeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCCCCCCCC
Q 000555 172 DVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 172 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~~~~~lT 244 (1427)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999875 99999999886421 13467999999998888999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
++||+.+....... .. ...++++.++.+||++..+ ..+
T Consensus 92 ~~~~l~~~~~~~~~------------~~-------------------------~~~~~~~~l~~~~l~~~~~-----~~~ 129 (214)
T cd03297 92 VRENLAFGLKRKRN------------RE-------------------------DRISVDELLDLLGLDHLLN-----RYP 129 (214)
T ss_pred HHHHHHHHHhhCCH------------HH-------------------------HHHHHHHHHHHcCCHhHhh-----cCc
Confidence 99999876421100 00 0112566888899875433 345
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++.++|+|++.| ...++.+++|++++|++|
T Consensus 130 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH-~~~~~~~~~d~i~~l~~G 208 (214)
T cd03297 130 AQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTH-DLSEAEYLADRIVVMEDG 208 (214)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEec-CHHHHHHhcCEEEEEECC
Confidence 6799999999999999999999999999999999999999999999987655889888654 456778899999999999
Q ss_pred eEEEec
Q 000555 405 HLVYQG 410 (1427)
Q Consensus 405 ~iv~~G 410 (1427)
+++.+|
T Consensus 209 ~i~~~g 214 (214)
T cd03297 209 RLQYIG 214 (214)
T ss_pred EEEecC
Confidence 998875
No 466
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.9e-33 Score=382.64 Aligned_cols=219 Identities=23% Similarity=0.353 Sum_probs=173.9
Q ss_pred CCccccceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---------------------------------
Q 000555 161 KPKRHSLTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--------------------------------- 207 (1427)
Q Consensus 161 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------------- 207 (1427)
++.+++.+||+|+|++|+||+.+||+||||||||||+++|+|+++|.
T Consensus 1175 Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 (1466)
T PTZ00265 1175 YISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKN 1254 (1466)
T ss_pred CCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccc
Confidence 44333457999999999999999999999999999999999999972
Q ss_pred ------------------CCceeEEEECCeecCccc---ccceEEEEccCCCCCCCCCHHHHHHHHHHhcCCCcchhhHh
Q 000555 208 ------------------LKKSGNITYNGYKLDEFH---VQRTSAYISQTDNHIPELTVRETFDFAARWQGANEGFAAYI 266 (1427)
Q Consensus 208 ------------------~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~~~~~~~lTV~E~l~f~~~~~~~~~~~~~~~ 266 (1427)
.+.+|+|++||+++++.. +++.+|||+|++.+| +.|++|||.|+.. . .
T Consensus 1255 ~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~--~---a----- 1323 (1466)
T PTZ00265 1255 VNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE--D---A----- 1323 (1466)
T ss_pred ccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC--C---C-----
Confidence 014899999999987653 578999999998766 5799999999621 0 0
Q ss_pred hhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccCCCCChHHhHHHHHHHHHhCCCc
Q 000555 267 NDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRK 346 (1427)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~ 346 (1427)
.+.++++..+.+. .++.+ ..|++..||.||+.+. .||||||||++|||||+++|+
T Consensus 1324 -------------t~eeI~~A~k~A~---------l~~fI--~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ 1378 (1466)
T PTZ00265 1324 -------------TREDVKRACKFAA---------IDEFI--ESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPK 1378 (1466)
T ss_pred -------------CHHHHHHHHHHcC---------CHHHH--HhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCC
Confidence 0111111111110 11122 2478889999998765 599999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC----CeEE-EecChHHHHH
Q 000555 347 TLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE----GHLV-YQGPRAEVLE 417 (1427)
Q Consensus 347 illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~----G~iv-~~G~~~~~~~ 417 (1427)
||+||||||+||+.++..|.+.|+++....++|+|++.|++ ++.+.||+|++|++ |+++ ++|+++++++
T Consensus 1379 ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1379 ILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred EEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999999999987533478988876654 67789999999999 9955 8999999863
No 467
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-33 Score=314.77 Aligned_cols=215 Identities=23% Similarity=0.336 Sum_probs=173.1
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--ce--eEEEEEECC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--GY--IEGDIKISG 902 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~~--~~G~i~i~g 902 (1427)
+.++|+++++. ++.+|+|+||++++||+++|+|+||||||||+++|+|...+ |. +.|++.++|
T Consensus 11 i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 78899887652 35689999999999999999999999999999999997542 21 236676766
Q ss_pred ccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccCCC
Q 000555 903 YPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGFPG 975 (1427)
Q Consensus 903 ~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~ 975 (1427)
.+... ..+++.++|++|++.+++.+|++||+.+..... .....++..+.++++++.+++.+ ..+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSH--GIKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 65432 234667999999999999999999998874322 11123344566889999999864 23333
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
+..||+|||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|++
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999999864 699999999975 46678999999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++...|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 677777764
No 468
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=317.65 Aligned_cols=214 Identities=22% Similarity=0.289 Sum_probs=171.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--c-eeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 902 (1427)
.++++|+++.++ ++++|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478999987663 23589999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000555 903 YPKE-----QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDS----LRDALVGF 973 (1427)
Q Consensus 903 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 973 (1427)
.+.. ...+++.++|++|++.+++ .|++||+.+....+. .. .+..+.++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 8753 1234567999999988887 499999988653321 11 123345667778777743 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 974 PGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 974 ~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
+..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 357999999999999999999999999999999999999999999999875 589999999986 5788899999997
Q ss_pred c--------CcEEEEccCC
Q 000555 1054 R--------GGRVIYGGKL 1064 (1427)
Q Consensus 1054 ~--------gg~~~~~g~~ 1064 (1427)
+ .|+++..|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 4688888764
No 469
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.6e-33 Score=315.58 Aligned_cols=215 Identities=27% Similarity=0.311 Sum_probs=171.7
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc-
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP- 904 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 904 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 67 (253)
T TIGR02323 3 LLQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSG 67 (253)
T ss_pred eEEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEecccc
Confidence 378899987653 2358999999999999999999999999999999999865 357999999876
Q ss_pred ----CCcc-------cccceEEEEccCCC--CCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCc-cccccc
Q 000555 905 ----KEQS-------TFARISGYVEQNDI--HSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELD-SLRDAL 970 (1427)
Q Consensus 905 ----~~~~-------~~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~ 970 (1427)
.... ..++.++|++|++. +.+..|+.||+.+..... .. ....+..+.++++++.+++. ...+..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~ 145 (253)
T TIGR02323 68 AELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL 145 (253)
T ss_pred cccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC
Confidence 3221 12346899999974 456789999987542211 10 11123346678999999996 355555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceE
Q 000555 971 VGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1049 (1427)
Q Consensus 971 vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1049 (1427)
+ +.||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 146 ~-----~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~ 219 (253)
T TIGR02323 146 P-----RAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRL 219 (253)
T ss_pred c-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 4 579999999999999999999999999999999999999999999998754 899999999975 466689999
Q ss_pred EEEecCcEEEEccCC
Q 000555 1050 LLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1050 ~~l~~gg~~~~~g~~ 1064 (1427)
++|++ |+++..|+.
T Consensus 220 ~~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 220 LVMQQ-GRVVESGLT 233 (253)
T ss_pred EEEEC-CEEEEECCH
Confidence 99986 678887764
No 470
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.3e-33 Score=317.60 Aligned_cols=207 Identities=23% Similarity=0.323 Sum_probs=166.8
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCee-----cCccc-------ccceEEEEc
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYK-----LDEFH-------VQRTSAYIS 234 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~-------~~~~~~yv~ 234 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +.... .++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999875 8999999987 54321 134699999
Q ss_pred cCCC--CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCc
Q 000555 235 QTDN--HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLD 312 (1427)
Q Consensus 235 Q~~~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~ 312 (1427)
|++. +++.+|+.||+.+........ . . ++ ....++++++.+|+.
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~-~---------~----------~~--------------~~~~~~~~l~~~~l~ 141 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGAR-H---------Y----------GD--------------IRATAGDWLERVEID 141 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccC-c---------H----------HH--------------HHHHHHHHHHHcCCC
Confidence 9863 567789999997643211100 0 0 00 011356788889986
Q ss_pred c-ccccccccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhH
Q 000555 313 L-CSETVVGNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPET 391 (1427)
Q Consensus 313 ~-~~~t~vg~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~ 391 (1427)
. ..+ +.+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.++.+.|+|++. |...++
T Consensus 142 ~~~~~-----~~~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~is-H~~~~~ 215 (258)
T PRK11701 142 AARID-----DLPTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVT-HDLAVA 215 (258)
T ss_pred hhHHh-----CCCccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-CCHHHH
Confidence 3 222 345679999999999999999999999999999999999999999999998765688998865 455677
Q ss_pred HhhcCcEEEEeCCeEEEecChHHHH
Q 000555 392 FDLFDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 392 ~~~~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 216 RLLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 7899999999999999999998764
No 471
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-34 Score=284.26 Aligned_cols=204 Identities=25% Similarity=0.336 Sum_probs=173.3
Q ss_pred ccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc----------------ccccce
Q 000555 850 KKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ----------------STFARI 913 (1427)
Q Consensus 850 ~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----------------~~~~~~ 913 (1427)
+...+||+||+..+.|+++.|+|.|||||||+|+||.-..+ +..|.|.+||..+.. ..+|.+
T Consensus 17 G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~ 94 (256)
T COG4598 17 GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTR 94 (256)
T ss_pred ccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHH
Confidence 45679999999999999999999999999999999986554 357999999875321 123446
Q ss_pred EEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHH
Q 000555 914 SGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVEL 993 (1427)
Q Consensus 914 ~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL 993 (1427)
.|+|+|+..+++++||.||+.-+---- -..++.+..++.+..++.+|+.+.+|... ..|||||+||++|||||
T Consensus 95 L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARaL 167 (256)
T COG4598 95 LGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARAL 167 (256)
T ss_pred hhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHHH
Confidence 799999999999999999986432111 13456677788899999999999888664 47999999999999999
Q ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 994 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 994 ~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.... ..+...+|+.|.+ |.+...||+
T Consensus 168 ameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P 236 (256)
T COG4598 168 AMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPP 236 (256)
T ss_pred hcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCCh
Confidence 99999999999999999999999999999999999999999998763 4556789999986 799999987
No 472
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=9.3e-33 Score=314.10 Aligned_cols=219 Identities=23% Similarity=0.314 Sum_probs=170.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 57888887653 24589999999999999999999999999999999997321135799999998754
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHH-hccCC---cCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000555 907 QS---T-FARISGYVEQNDIHSPQVTVEESLWFSA-NLRLS---KEVSKNQRHEFVEEVMRLVELD-SLRDALVGFPGSS 977 (1427)
Q Consensus 907 ~~---~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~-~l~~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 977 (1427)
.. . .++.++|++|++.+++.+|+.+++.+.. .++.. .........+.+++.++.+++. +..+..+. +
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----V 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----C
Confidence 21 1 2346899999998888888777665332 11110 0011223345678889999985 34444431 3
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-hceEEEEecCc
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELLLMKRGG 1056 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~gg 1056 (1427)
.||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++++.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999998877899999999975 34444 799999975 6
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 78888875
No 473
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.8e-33 Score=308.62 Aligned_cols=196 Identities=27% Similarity=0.413 Sum_probs=162.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCccc------ccceEEEEccCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEFH------VQRTSAYISQTDNHI 240 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~~~~~ 240 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999875 999999999875322 346799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccc
Q 000555 241 PELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVG 320 (1427)
Q Consensus 241 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg 320 (1427)
+.+|+.||+.++...... .... +....++++++.+||.+..+.
T Consensus 95 ~~~t~~~n~~~~~~~~~~----------~~~~------------------------~~~~~~~~~l~~~~l~~~~~~--- 137 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN----------LSYQ------------------------EARERARAMLEAVGLGDHLDY--- 137 (220)
T ss_pred CCCCHHHHHHHHHHhccC----------CCHH------------------------HHHHHHHHHHHHcCChhhhhc---
Confidence 889999999986532210 0000 001235678899999754443
Q ss_pred cccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEE
Q 000555 321 NDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLL 400 (1427)
Q Consensus 321 ~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vil 400 (1427)
.++.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++.++|+|++.|++ +..+.||+|++
T Consensus 138 --~~~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~--~~~~~~d~v~~ 213 (220)
T TIGR02982 138 --YPHNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDN--RILDVADRIVH 213 (220)
T ss_pred --ChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH--HHHhhCCEEEE
Confidence 44579999999999999999999999999999999999999999999998765689999987765 35689999999
Q ss_pred EeCCeE
Q 000555 401 LSEGHL 406 (1427)
Q Consensus 401 L~~G~i 406 (1427)
|++|++
T Consensus 214 l~~g~~ 219 (220)
T TIGR02982 214 MEDGKL 219 (220)
T ss_pred EECCEE
Confidence 999986
No 474
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.6e-33 Score=364.36 Aligned_cols=208 Identities=27% Similarity=0.399 Sum_probs=168.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||+++++. .+++.++||+|++.+|+ .
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-G 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-H
Confidence 46999999999999999999999999999999999999986 99999999998654 35788999999987665 5
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDM 323 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~ 323 (1427)
||+|||.++.+.. . +++++.+..+.+ ..++.++ .++...||.+|+.+
T Consensus 563 TI~eNi~l~~~~~-~---------------------~~~~i~~a~~~a---------~l~~~i~--~lp~gldt~i~e~G 609 (708)
T TIGR01193 563 SILENLLLGAKEN-V---------------------SQDEIWAACEIA---------EIKDDIE--NMPLGYQTELSEEG 609 (708)
T ss_pred HHHHHHhccCCCC-C---------------------CHHHHHHHHHHh---------CCHHHHH--hcccccCcEecCCC
Confidence 9999998852100 0 001111111111 0112222 35667899999866
Q ss_pred CCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeC
Q 000555 324 IRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSE 403 (1427)
Q Consensus 324 ~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~ 403 (1427)
.+||||||||++||||++.+|+||+||||||+||+.++..+.+.|+++ .++|+|++.|++ ++.+.||+|++|++
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~ 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEEC
Confidence 469999999999999999999999999999999999999999999874 268988876665 56789999999999
Q ss_pred CeEEEecChHHHHH
Q 000555 404 GHLVYQGPRAEVLE 417 (1427)
Q Consensus 404 G~iv~~G~~~~~~~ 417 (1427)
|++++.|+++++.+
T Consensus 684 G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 684 GKIIEQGSHDELLD 697 (708)
T ss_pred CEEEEECCHHHHHh
Confidence 99999999999864
No 475
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=347.15 Aligned_cols=206 Identities=25% Similarity=0.337 Sum_probs=172.7
Q ss_pred ceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCcc----cccceEEEEccCCCCCCCC
Q 000555 852 LQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQS----TFARISGYVEQNDIHSPQV 927 (1427)
Q Consensus 852 ~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~~~~~~~l 927 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 468999999999999999999999999999999999765 3579999999876421 2346799999999889999
Q ss_pred CHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000555 928 TVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1007 (1427)
Q Consensus 928 Tv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTs 1007 (1427)
||+||+.+..........+.++..+.++++++.+++.+..+..+ ..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532110101123334567889999999987777765 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCCCC
Q 000555 1008 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKLGV 1066 (1427)
Q Consensus 1008 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~~~ 1066 (1427)
|||+.+...+.+.|++++++|+|||+++|++. ++...||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999878999999999975 56778999999986 68888887643
No 476
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=314.69 Aligned_cols=212 Identities=20% Similarity=0.301 Sum_probs=167.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|..+ |..+.+|+|+++|+++... ..++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 2212489999999886432 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++. ||+||+.++...++.... .. + ....++.+++.+||.+...+..
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~---------~~----------~--------------~~~~~~~~l~~~~l~~~~~~~~ 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN---------KK----------K--------------LDEIVEKSLTSVGLWEELGDRL 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC---------HH----------H--------------HHHHHHHHHHHcCCCchhhhHh
Confidence 775 999999886433211000 00 0 0112566788888864222222
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
+..++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.|+ ..++.++||+++
T Consensus 144 -~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~-~~tiiiisH~-~~~~~~~~d~i~ 219 (251)
T PRK14244 144 -KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-K-NFTIIVVTHS-MKQAKKVSDRVA 219 (251)
T ss_pred -hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEeCC-HHHHHhhcCEEE
Confidence 33456799999999999999999999999999999999999999999999984 3 7899987655 457788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+++++.
T Consensus 220 ~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 220 FFQSGRIVEYNTTQEIF 236 (251)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 477
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=324.45 Aligned_cols=224 Identities=28% Similarity=0.424 Sum_probs=185.7
Q ss_pred cCcccCCCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeE
Q 000555 816 KGMILPFQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIE 895 (1427)
Q Consensus 816 ~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~ 895 (1427)
..+.+|.....+..+++++.. +..++++|+||||.+.|||.+||+||||||||||.++|.|.-. +..
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~P-----------Pg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~~ 390 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAAP-----------PGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PTS 390 (580)
T ss_pred CCCCCCCCCceeeEeeeeecC-----------CCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cCC
Confidence 346677777789999998732 2246789999999999999999999999999999999999755 357
Q ss_pred EEEEECCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHH-----HHHHHHHHHHHcCCcccc
Q 000555 896 GDIKISGYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQ-----RHEFVEEVMRLVELDSLR 967 (1427)
Q Consensus 896 G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~-----~~~~v~~~l~~l~L~~~~ 967 (1427)
|.|.+||.+.++ +.+-+++||.||+-.+|+. ||.||+. |...+.+++. +.+.+.|++ +.+.+-.
T Consensus 391 G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~G-TIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~GY 462 (580)
T COG4618 391 GSVRLDGADLRQWDREQLGRHIGYLPQDVELFDG-TIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQGY 462 (580)
T ss_pred CcEEecchhhhcCCHHHhccccCcCcccceecCC-cHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCCc
Confidence 999999998754 5577899999999888875 9999995 2222333322 122233332 4667778
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Q 000555 968 DALVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1047 (1427)
Q Consensus 968 ~~~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1047 (1427)
||.+|.. +.+||||||||+++||||-.+|.+++||||-|+||...+..+.+.|....++|+|+|+++|+|+ +...+|
T Consensus 463 dT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~D 539 (580)
T COG4618 463 DTRIGEG-GATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVD 539 (580)
T ss_pred cCccCCC-CCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhcc
Confidence 9999964 4689999999999999999999999999999999999999999999999999999999999986 678899
Q ss_pred eEEEEecCcEEEEccCC
Q 000555 1048 ELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1048 ~v~~l~~gg~~~~~g~~ 1064 (1427)
+|++|++ |++..+||.
T Consensus 540 kilvl~~-G~~~~FG~r 555 (580)
T COG4618 540 KILVLQD-GRIAAFGPR 555 (580)
T ss_pred eeeeecC-ChHHhcCCH
Confidence 9999975 789999986
No 478
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=316.12 Aligned_cols=212 Identities=21% Similarity=0.329 Sum_probs=168.1
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|.+++. .+.+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 35999999999999999999999999999999999998741 12489999999887531 235679999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ .||+||+.++....+.. . . .. .+..+++.++.+|+....+. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~--~--------~----------~~--------------~~~~~~~~l~~~~l~~~~~~-~ 139 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVK--S--------K----------HK--------------LDRIVEESLKKAALWDEVKS-E 139 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCC--c--------H----------HH--------------HHHHHHHHHHHcCCCchhHH-H
Confidence 77 89999999865432110 0 0 00 01124556777777532111 2
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.++.+.+||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.+ ++|+|++.|+ ..++.+++|+++
T Consensus 140 ~~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~sH~-~~~~~~~~d~i~ 216 (250)
T PRK14262 140 LNKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVTHN-IGQAIRIADYIA 216 (250)
T ss_pred HhCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEeCC-HHHHHHhCCEEE
Confidence 3455678999999999999999999999999999999999999999999999853 6888887555 456788999999
Q ss_pred EEeCCeEEEecChHHHHH
Q 000555 400 LLSEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~~ 417 (1427)
+|++|+++..|+.+++.+
T Consensus 217 ~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14262 217 FMYRGELIEYGPTREIVE 234 (250)
T ss_pred EEECCEEEEecCHHHHHh
Confidence 999999999999988753
No 479
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=314.59 Aligned_cols=219 Identities=25% Similarity=0.328 Sum_probs=173.9
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-ceeEEEEEECC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKT--G-GYIEGDIKISG 902 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 902 (1427)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 478899987652 2458999999999999999999999999999999999643 1 12579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 903 YPKEQ-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 903 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
.++.. ...++.++|++|++.+++. |++||+.+..... ...+.+...+.+.+.++.+++.+....... ....
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIH--GEDDEDFIEERVEESLKAAALWDEVKDKLD-KSAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhc--CCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcc
Confidence 87542 1345679999999988875 9999998764322 111223345667888999888542211111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||+|||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999864 899999999986 57788999999986 68
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+++.|+.
T Consensus 223 i~~~g~~ 229 (250)
T PRK14266 223 IIESGLT 229 (250)
T ss_pred EEEeCCH
Confidence 8888764
No 480
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.5e-33 Score=315.10 Aligned_cols=197 Identities=25% Similarity=0.375 Sum_probs=167.3
Q ss_pred eccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc---ccccceEEEEccCCCCCCCCCHH
Q 000555 854 LLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ---STFARISGYVEQNDIHSPQVTVE 930 (1427)
Q Consensus 854 iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 930 (1427)
+|+|+||++++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 6999999999999999999999999999999999764 27999999987643 22345689999998888899999
Q ss_pred HHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000555 931 ESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1003 (1427)
Q Consensus 931 e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqrl~ia~aL~~-------~p~illlD 1003 (1427)
||+.+.... ..+.++..+.++++++.++|.+..+..+ ..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 1122333556889999999987777665 4799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEccCC
Q 000555 1004 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1004 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g~~ 1064 (1427)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877899999999975 47788999999986 678887764
No 481
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-34 Score=323.76 Aligned_cols=218 Identities=27% Similarity=0.383 Sum_probs=179.1
Q ss_pred CCCceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEEC
Q 000555 822 FQPLAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS 901 (1427)
Q Consensus 822 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~ 901 (1427)
.....++|+||++.++ .++++|+||||++.||+.+||+|||||||||+|++|.+.-+ ..+|.|.||
T Consensus 533 ~~~G~i~fsnvtF~Y~------------p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffd--v~sGsI~iD 598 (790)
T KOG0056|consen 533 VTQGKIEFSNVTFAYD------------PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFD--VNSGSITID 598 (790)
T ss_pred ccCCeEEEEEeEEecC------------CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhh--ccCceEEEc
Confidence 4456899999999885 35789999999999999999999999999999999998654 347999999
Q ss_pred CccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHH--HHH-HHHcCCcccccccccCCC
Q 000555 902 GYPKEQ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFV--EEV-MRLVELDSLRDALVGFPG 975 (1427)
Q Consensus 902 g~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v--~~~-l~~l~L~~~~~~~vg~~~ 975 (1427)
|++++. ..+|+.+|.||||..+|. .|+..|+.|+.. +.++++..+.+ ..+ -+.++..+..++.||..|
T Consensus 599 gqdIrnvt~~SLRs~IGVVPQDtvLFN-dTI~yNIryak~-----~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERG 672 (790)
T KOG0056|consen 599 GQDIRNVTQSSLRSSIGVVPQDTVLFN-DTILYNIRYAKP-----SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERG 672 (790)
T ss_pred CchHHHHHHHHHHHhcCcccCcceeec-ceeeeheeecCC-----CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcc
Confidence 998754 567889999999988875 588888887631 22333332211 111 123567777889999766
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 976 SSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 976 ~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
- .|||||||||+|||+++++|.|++|||+||+||..+++.|+..|.+++. ++|-|+++|+.|. .-.+|.|+++++
T Consensus 673 L-kLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLST--ivnAD~ILvi~~- 747 (790)
T KOG0056|consen 673 L-KLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLST--IVNADLILVISN- 747 (790)
T ss_pred c-ccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehh--eecccEEEEEeC-
Confidence 5 4999999999999999999999999999999999999999999999875 7999999999874 446799999986
Q ss_pred cEEEEccCC
Q 000555 1056 GRVIYGGKL 1064 (1427)
Q Consensus 1056 g~~~~~g~~ 1064 (1427)
|++++.|..
T Consensus 748 G~IvErG~H 756 (790)
T KOG0056|consen 748 GRIVERGRH 756 (790)
T ss_pred CeEeecCcH
Confidence 688888864
No 482
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=7.2e-33 Score=302.19 Aligned_cols=171 Identities=45% Similarity=0.730 Sum_probs=152.2
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECCeecCcccccceEEEEccCCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKL--DSSLKKSGNITYNGYKLDEFHVQRTSAYISQTDNHIPELT 244 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~~~~~~~lT 244 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999998 765 8999999998765445678999999988888999
Q ss_pred HHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccccccccC
Q 000555 245 VRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVVGNDMI 324 (1427)
Q Consensus 245 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~ 324 (1427)
++||+.++.++
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------- 109 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------- 109 (194)
T ss_pred HHHHHHHHHHh---------------------------------------------------------------------
Confidence 99999764210
Q ss_pred CCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEEeCC
Q 000555 325 RGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLLSEG 404 (1427)
Q Consensus 325 ~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL~~G 404 (1427)
..||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++.+ .++|+|++.|++..++.+.||++++|++|
T Consensus 110 ~~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 110 RGLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIICSIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCchHHHHHhcCEEEEEeCC
Confidence 04999999999999999999999999999999999999999999999865 48999998777655788899999999999
Q ss_pred eEEEec
Q 000555 405 HLVYQG 410 (1427)
Q Consensus 405 ~iv~~G 410 (1427)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 483
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.5e-33 Score=304.62 Aligned_cols=194 Identities=24% Similarity=0.323 Sum_probs=160.9
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEccc
Confidence 5677776542 3468999999999999999999999999999999999765 357999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000555 908 --STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTEQRK 985 (1427)
Q Consensus 908 --~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 985 (1427)
..+++.++|++|++.+++.+|+.||+.+....+. .+ .+.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~-----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG-----GA--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC-----Cc--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2245678999999888889999999987654321 11 235788999999988777765 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEE
Q 000555 986 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1051 (1427)
Q Consensus 986 rl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1051 (1427)
|++||++++.+|++++|||||+|||+.+...+++.|++++++|.|||+++|++. ++ .+++++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~--~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDL-GL--VEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-cc--cceEEee
Confidence 999999999999999999999999999999999999998777999999999975 22 3466553
No 484
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=315.59 Aligned_cols=211 Identities=21% Similarity=0.295 Sum_probs=167.7
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+|. .+.+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35999999999999999999999999999999999998641 12489999999987532 235679999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++ +|++||+.|+....+.. .. .+ ...+++.+++.+||...... .
T Consensus 97 ~~-~tv~enl~~~~~~~~~~--~~--------~~------------------------~~~~~~~~l~~~~l~~~~~~-~ 140 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIK--DK--------KE------------------------LDKIVEWALKKAALWDEVKD-D 140 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCC--cH--------HH------------------------HHHHHHHHHHHcCCchhhhh-H
Confidence 77 89999999875432210 00 00 01124567788887421111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-+..++.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.|+ ..++.++||+++
T Consensus 141 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivsH~-~~~~~~~~d~v~ 217 (251)
T PRK14270 141 LKKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVTHN-MQQASRVSDYTA 217 (251)
T ss_pred hhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEEcC-HHHHHHhcCEEE
Confidence 2345668999999999999999999999999999999999999999999999864 5788887655 567788999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+.+++.
T Consensus 218 ~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 218 FFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEECCeEEEeCCHHHHh
Confidence 99999999999998874
No 485
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.1e-33 Score=311.13 Aligned_cols=208 Identities=26% Similarity=0.439 Sum_probs=165.9
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.+. ...+.+|+|+|+++++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-----------~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYP-----------NQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcC-----------CCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 67888876542 112458999999999999999999999999999999999865 35799999998653
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVG------FPGSS 977 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 977 (1427)
. ...++.++|++|++.+++ .||.|++.+... ... .+.+.++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999988776 699999876421 111 2235677888888776655321 11235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ +|||+++|++. ..+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999976 3478999999986 56
Q ss_pred EEEc
Q 000555 1058 VIYG 1061 (1427)
Q Consensus 1058 ~~~~ 1061 (1427)
+++.
T Consensus 216 i~~~ 219 (220)
T cd03245 216 IVAD 219 (220)
T ss_pred Eeec
Confidence 6554
No 486
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-32 Score=303.58 Aligned_cols=200 Identities=21% Similarity=0.303 Sum_probs=153.1
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCcc
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP 904 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 904 (1427)
-.+-.+||+|.++ +.++++++++|-|.-...+||+||||.||||||++|.|..++ ..|+..-|
T Consensus 585 PvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn--- 647 (807)
T KOG0066|consen 585 PVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN--- 647 (807)
T ss_pred CeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc---
Confidence 3577888887653 356789999999999999999999999999999999998764 34544322
Q ss_pred CCcccccceEEEEccCC--CCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000555 905 KEQSTFARISGYVEQND--IHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLSTE 982 (1427)
Q Consensus 905 ~~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 982 (1427)
.+-++|+..|+. .+-...|.-|.|.-..++ +. +.....|-.+||...++|+- ...||||
T Consensus 648 -----hrL~iG~FdQh~~E~L~~Eetp~EyLqr~FNl------py----q~ARK~LG~fGL~sHAHTik----ikdLSGG 708 (807)
T KOG0066|consen 648 -----HRLRIGWFDQHANEALNGEETPVEYLQRKFNL------PY----QEARKQLGTFGLASHAHTIK----IKDLSGG 708 (807)
T ss_pred -----ceeeeechhhhhHHhhccccCHHHHHHHhcCC------Ch----HHHHHHhhhhhhhhccceEe----eeecCCc
Confidence 223578888764 344455666666432222 21 22456788899999898873 3689999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEEcc
Q 000555 983 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIYGG 1062 (1427)
Q Consensus 983 qrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~~g 1062 (1427)
||-||++|.--+..|+||+|||||++||.++...+-+.|++. ...||+++|+-+. +.+.-..++|+.+.|.-.-.|
T Consensus 709 QKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdG 784 (807)
T KOG0066|consen 709 QKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDG 784 (807)
T ss_pred chHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccc
Confidence 999999999999999999999999999999999999999876 5689999999764 455556788887766655566
Q ss_pred CC
Q 000555 1063 KL 1064 (1427)
Q Consensus 1063 ~~ 1064 (1427)
..
T Consensus 785 dF 786 (807)
T KOG0066|consen 785 DF 786 (807)
T ss_pred cH
Confidence 54
No 487
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-33 Score=300.46 Aligned_cols=171 Identities=30% Similarity=0.428 Sum_probs=148.8
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++ ++++|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 65 (178)
T cd03229 1 LELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLT 65 (178)
T ss_pred CEEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35778876552 2458999999999999999999999999999999999765 35899999998754
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000555 907 Q-----STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLST 981 (1427)
Q Consensus 907 ~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 981 (1427)
. ..+++.++|++|++.+++..|++|++.+. |||
T Consensus 66 ~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~ 103 (178)
T cd03229 66 DLEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSG 103 (178)
T ss_pred ccchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCH
Confidence 2 23457899999999888889999987531 899
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhhceEEEEecC
Q 000555 982 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLMKRG 1055 (1427)
Q Consensus 982 Gqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~g 1055 (1427)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. .+.+.+|++++|++|
T Consensus 104 G~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 104 GQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999876 899999999975 466689999999864
No 488
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-33 Score=316.54 Aligned_cols=210 Identities=26% Similarity=0.384 Sum_probs=162.8
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCC
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKE 906 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 906 (1427)
++++|+++.++. .++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (234)
T cd03251 1 VEFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVR 67 (234)
T ss_pred CEEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhh
Confidence 357788765531 12358999999999999999999999999999999999865 35799999998653
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCC
Q 000555 907 Q---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRH-----EFVEEVMRLV--ELDSLRDALVGFPGS 976 (1427)
Q Consensus 907 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~ 976 (1427)
. ..+++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++.+..+.. +
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~ 136 (234)
T cd03251 68 DYTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----G 136 (234)
T ss_pred hCCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----C
Confidence 2 234567999999988876 6999999765321 1111111 1233444444 454444433 3
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCc
Q 000555 977 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG 1056 (1427)
Q Consensus 977 ~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg 1056 (1427)
..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++. +++|||+++|++. ++ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G 212 (234)
T cd03251 137 VKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-G 212 (234)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-C
Confidence 5899999999999999999999999999999999999999999999986 4899999999986 34 45999999987 5
Q ss_pred EEEEccCC
Q 000555 1057 RVIYGGKL 1064 (1427)
Q Consensus 1057 ~~~~~g~~ 1064 (1427)
+++..|+.
T Consensus 213 ~i~~~~~~ 220 (234)
T cd03251 213 KIVERGTH 220 (234)
T ss_pred eEeeeCCH
Confidence 77777653
No 489
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=318.12 Aligned_cols=213 Identities=27% Similarity=0.410 Sum_probs=169.0
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-----CCceeEEEECCeecCcc---cccceEEEEccCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS-----LKKSGNITYNGYKLDEF---HVQRTSAYISQTDN 238 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~ 238 (1427)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999999763 01279999999987542 23456899999976
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCccccccc
Q 000555 239 HIPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETV 318 (1427)
Q Consensus 239 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~ 318 (1427)
.++.+||+||+.++........+ ... . .....++.+++.+||+...+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~~~~------~~~-----------~--------------~~~~~~~~~l~~~~l~~~~~-- 140 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHARRAG------ALT-----------H--------------RDGEIAWQALALAGATALVG-- 140 (272)
T ss_pred CCCCCcHHHHHhhcccccccccc------cCC-----------H--------------HHHHHHHHHHHHcCcHhhhc--
Confidence 66679999999875211000000 000 0 00123567888999974333
Q ss_pred cccccCCCCChHHhHHHHHHHHHh---------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCch
Q 000555 319 VGNDMIRGVSGGQKKRVTTGEMIV---------GPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPP 389 (1427)
Q Consensus 319 vg~~~~~~LSGGqkqRvsia~aL~---------~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~ 389 (1427)
+.+..|||||||||+||++|+ .+|++++|||||+|||+.+...+.+.|+++.++.++|+|++.|+ ..
T Consensus 141 ---~~~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~-~~ 216 (272)
T PRK13547 141 ---RDVTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHD-PN 216 (272)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HH
Confidence 445679999999999999999 59999999999999999999999999999876558899887555 56
Q ss_pred hHHhhcCcEEEEeCCeEEEecChHHHH
Q 000555 390 ETFDLFDDLLLLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 390 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 416 (1427)
++.++||++++|++|++++.|+.+++.
T Consensus 217 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 217 LAARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHHhCCEEEEEECCeEEEecCHHHHc
Confidence 778899999999999999999988764
No 490
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=311.94 Aligned_cols=218 Identities=19% Similarity=0.264 Sum_probs=174.4
Q ss_pred ceEEEeeeeeEEeCcc----chhc--cCC-CcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEE
Q 000555 825 LAMTFHNVNYYVDMPQ----AMRS--QGI-PEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGD 897 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~----~~~~--~~~-~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~ 897 (1427)
+.+..+|++..++... .++. .++ ....+.+|+|+|++|+|||+++|+||||||||||+++|+|..+ +.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~ 80 (264)
T PRK13546 3 VSVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGK 80 (264)
T ss_pred ceEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceE
Confidence 4678888864443321 1111 111 2245679999999999999999999999999999999999865 35799
Q ss_pred EEECCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000555 898 IKISGYPKEQSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSS 977 (1427)
Q Consensus 898 i~i~g~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 977 (1427)
|.++|. ++++.|+..+.+.+|+.||+.+..... ..+.++..+.++++++.+++.+..+..+ .
T Consensus 81 I~~~g~----------~~~~~~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (264)
T PRK13546 81 VDRNGE----------VSVIAISAGLSGQLTGIENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----K 142 (264)
T ss_pred EEECCE----------EeEEecccCCCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----c
Confidence 999984 356777777778899999998764332 2234444556778888889987777655 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+.|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 143 ~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~ 220 (264)
T PRK13546 143 KYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GK 220 (264)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999998777999999999975 46678999999986 67
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+...|+.
T Consensus 221 i~~~g~~ 227 (264)
T PRK13546 221 LKDYGEL 227 (264)
T ss_pred EEEeCCH
Confidence 7777764
No 491
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=326.52 Aligned_cols=229 Identities=25% Similarity=0.389 Sum_probs=193.3
Q ss_pred eEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccC
Q 000555 826 AMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK 905 (1427)
Q Consensus 826 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 905 (1427)
-++++|++.++ +..++|+||||+++|||++||+|.||||||||+|+|+|... +.+|+|.+||.+.
T Consensus 8 ll~~~~i~K~F-------------ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~ 72 (500)
T COG1129 8 LLELRGISKSF-------------GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPV 72 (500)
T ss_pred eeeeecceEEc-------------CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEc
Confidence 46788887554 34679999999999999999999999999999999999765 4689999999976
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhccC-CcCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000555 906 EQS----TFARISGYVEQNDIHSPQVTVEESLWFSANLRL-SKEVSKNQRHEFVEEVMRLVELDSLRDALVGFPGSSGLS 980 (1427)
Q Consensus 906 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 980 (1427)
... ....-++.|.|+..+.|++||.||+.++...+. ..-++.....+...++++.+++....++.++ +||
T Consensus 73 ~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~Ls 147 (500)
T COG1129 73 AFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLS 147 (500)
T ss_pred cCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCC
Confidence 432 234568999999999999999999988765543 2335666677788999999999654777775 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcEEEE
Q 000555 981 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGRVIY 1060 (1427)
Q Consensus 981 gGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~~~~ 1060 (1427)
+||||.|.|||||..+++||+||||||+|+......+.+.++++.++|.+||.++|++. ++++.||++.||.+ |+++.
T Consensus 148 iaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~ 225 (500)
T COG1129 148 IAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVG 225 (500)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEee
Confidence 99999999999999999999999999999999999999999999999999999999986 89999999999987 57777
Q ss_pred ccCC-C-CCchhHHHHHH
Q 000555 1061 GGKL-G-VHSKTMIDYFQ 1076 (1427)
Q Consensus 1061 ~g~~-~-~~~~~~~~yf~ 1076 (1427)
.++. + ...++++...-
T Consensus 226 ~~~~~~~~~~~~lv~~Mv 243 (500)
T COG1129 226 TRPTAAETSEDELVRLMV 243 (500)
T ss_pred ecccccCCCHHHHHHHhh
Confidence 7773 3 33345555543
No 492
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-32 Score=308.46 Aligned_cols=210 Identities=23% Similarity=0.285 Sum_probs=166.0
Q ss_pred EEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEEC--Cc-
Q 000555 827 MTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKIS--GY- 903 (1427)
Q Consensus 827 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~--g~- 903 (1427)
++++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ ..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 578888876642100 00124699999999999999999999999999999999998653 47999998 42
Q ss_pred -cCCc---cc----ccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000555 904 -PKEQ---ST----FARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSL-RDALVGFP 974 (1427)
Q Consensus 904 -~~~~---~~----~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~ 974 (1427)
+... .. .++.+||++|++.+++.+||+|++.+..... ........+.+.++++.+++.+. .+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--- 147 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP--- 147 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc---
Confidence 3211 11 1346899999999999999999998764321 12233344567889999999753 35443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEe
Q 000555 975 GSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMK 1053 (1427)
Q Consensus 975 ~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1053 (1427)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+...+|+++.+.
T Consensus 148 --~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 148 --ATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred --ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 579999999999999999999999999999999999999999999999777999999999954 3556899998763
No 493
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=314.60 Aligned_cols=215 Identities=26% Similarity=0.314 Sum_probs=172.6
Q ss_pred ceEEEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--c-eeEEEEEEC
Q 000555 825 LAMTFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTG--G-YIEGDIKIS 901 (1427)
Q Consensus 825 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 901 (1427)
..++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3589999988663 23689999999999999999999999999999999997542 1 258999999
Q ss_pred CccCC-------cccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCC-HHHHHHHHHHHHHHcCCcc----cccc
Q 000555 902 GYPKE-------QSTFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVS-KNQRHEFVEEVMRLVELDS----LRDA 969 (1427)
Q Consensus 902 g~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~-~~~~~~~v~~~l~~l~L~~----~~~~ 969 (1427)
|.+.. ...+++.++|++|++.+++. |++||+.+..... ... ....++.++++++.+++.+ ..+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~ 157 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIR---GVKRRSILEERVENALRNAALWDEVKDRLGD 157 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHc---CCChHHHHHHHHHHHHHHcCCchhhhHHHhC
Confidence 87642 12345679999999988886 9999998764322 111 1222355777888887742 2333
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceE
Q 000555 970 LVGFPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1049 (1427)
Q Consensus 970 ~vg~~~~~~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v 1049 (1427)
.+ ..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++
T Consensus 158 ~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i 230 (265)
T PRK14252 158 LA-----FNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYT 230 (265)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEE
Confidence 33 57999999999999999999999999999999999999999999999865 689999999975 467789999
Q ss_pred EEEecCcEEEEccCC
Q 000555 1050 LLMKRGGRVIYGGKL 1064 (1427)
Q Consensus 1050 ~~l~~gg~~~~~g~~ 1064 (1427)
++|++ |+++..|+.
T Consensus 231 ~~l~~-G~i~~~g~~ 244 (265)
T PRK14252 231 AYMYM-GELIEFGAT 244 (265)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 677777764
No 494
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3e-33 Score=316.02 Aligned_cols=210 Identities=29% Similarity=0.444 Sum_probs=160.1
Q ss_pred EEeeeeeEEeCccchhccCCCcccceeccceeeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCceeEEEEEECCccCCc
Q 000555 828 TFHNVNYYVDMPQAMRSQGIPEKKLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKEQ 907 (1427)
Q Consensus 828 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~ai~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 907 (1427)
+++|+++.++. .+++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~----------~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPS----------RPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCC----------CCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 57788765521 012468999999999999999999999999999999999865 357999999987532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhccCCcCCCHHHHHHHHHHHHHHcCCccccc-------ccccCCCCC
Q 000555 908 ---STFARISGYVEQNDIHSPQVTVEESLWFSANLRLSKEVSKNQRHEFVEEVMRLVELDSLRD-------ALVGFPGSS 977 (1427)
Q Consensus 908 ---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~~-------~~vg~~~~~ 977 (1427)
...++.++|++|++.+++ .||+|++.+....+ ..++ .++.++..++.+..+ +... ..+.
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDEE----VEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHHH----HHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223467999999988776 69999997643211 1111 222233333322111 1111 1235
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEEecCcE
Q 000555 978 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGR 1057 (1427)
Q Consensus 978 ~LSgGqrqrl~ia~aL~~~p~illlDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~gg~ 1057 (1427)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++ +.+|++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999987 7899999999975 34 47999999986 67
Q ss_pred EEEccCC
Q 000555 1058 VIYGGKL 1064 (1427)
Q Consensus 1058 ~~~~g~~ 1064 (1427)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 8887764
No 495
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=313.76 Aligned_cols=212 Identities=21% Similarity=0.300 Sum_probs=165.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSL--KKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 469999999999999999999999999999999999987631 1379999999987531 235679999999988
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+|++||+.++....+.. .. + +. ....+..++.+++...... .
T Consensus 97 ~~~~t~~enl~~~~~~~~~~--~~---------~---------~~--------------~~~~~~~l~~~~l~~~l~~-~ 141 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIR--DR---------D---------HL--------------MEVAERSLRGAALWDEVKD-R 141 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCC--CH---------H---------HH--------------HHHHHHHHHHcCcchhhhh-h
Confidence 99899999998764322110 00 0 00 0112334455554321111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.+..++.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++. + ++|+|++.|+ ..++.+.||+++
T Consensus 142 ~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~~tiii~sH~-~~~~~~~~d~i~ 218 (252)
T PRK14272 142 LKTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK-K-VTTIIIVTHN-MHQAARVSDTTS 218 (252)
T ss_pred hcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEeCC-HHHHHHhCCEEE
Confidence 134466799999999999999999999999999999999999999999999985 3 6888887554 567888999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+++++.
T Consensus 219 ~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 219 FFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999998875
No 496
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=313.67 Aligned_cols=211 Identities=20% Similarity=0.299 Sum_probs=164.5
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLD--SSLKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|+++++||+++|+||||||||||+++|+|..+ +..+.+|+|.++|+++... ..++.++|++|++.+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 113 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNLRREIGMVFQKPNP 113 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHHhccEEEEecCCcc
Confidence 359999999999999999999999999999999999864 2112489999999987531 235679999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++. ||+||+.++....+.. .. .. .+..++..++.+++...... .
T Consensus 114 ~~~-tv~enl~~~~~~~~~~--~~------------------~~--------------~~~~~~~~l~~~~l~~~~~~-~ 157 (268)
T PRK14248 114 FPK-SIYNNITHALKYAGER--RK------------------SV--------------LDEIVEESLTKAALWDEVKD-R 157 (268)
T ss_pred Ccc-cHHHHHHHHHHhcCCC--cH------------------HH--------------HHHHHHHHHHHcCCCcchHH-H
Confidence 775 9999998864322110 00 00 00123456677776421111 1
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
-++.+..||||||||++|||+|+.+|+++||||||+|||+.++..+.+.|+++.+ ++|||++.|+ ..++.++||+++
T Consensus 158 ~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~-~~~~~~~~d~v~ 234 (268)
T PRK14248 158 LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVTHN-MQQALRVSDRTA 234 (268)
T ss_pred HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEEeC-HHHHHHhCCEEE
Confidence 2345668999999999999999999999999999999999999999999999854 5788887555 567888999999
Q ss_pred EEeCCeEEEecChHHHH
Q 000555 400 LLSEGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~~G~iv~~G~~~~~~ 416 (1427)
+|++|++++.|+.+++.
T Consensus 235 ~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 235 FFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 497
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.2e-33 Score=314.61 Aligned_cols=206 Identities=23% Similarity=0.393 Sum_probs=160.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 46999999999999999999999999999999999999875 89999999886532 2356799999998665 47
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh--CCcccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL--GLDLCSETVVGN 321 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~t~vg~ 321 (1427)
||+||+.+... .. .... . +..++ ....+..++.+ +++ +.. +
T Consensus 91 tv~~nl~~~~~--~~--~~~~----~---------------~~~~~---------~~~~~~~l~~l~~~~~----~~~-~ 133 (237)
T cd03252 91 SIRDNIALADP--GM--SMER----V---------------IEAAK---------LAGAHDFISELPEGYD----TIV-G 133 (237)
T ss_pred hHHHHhhccCC--CC--CHHH----H---------------HHHHH---------HcCcHHHHHhCccccc----chh-h
Confidence 99999987421 10 0000 0 00000 00123344444 333 222 3
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
+.+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.|++ .++ +.||++++|
T Consensus 134 ~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~-~~tiii~sH~~-~~~-~~~d~v~~l 209 (237)
T cd03252 134 EQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-A-GRTVIIIAHRL-STV-KNADRIIVM 209 (237)
T ss_pred cCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-C-CCEEEEEeCCH-HHH-HhCCEEEEE
Confidence 4566899999999999999999999999999999999999999999999985 3 78999877665 345 579999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|++++.|+.+++.+
T Consensus 210 ~~G~i~~~~~~~~~~~ 225 (237)
T cd03252 210 EKGRIVEQGSHDELLA 225 (237)
T ss_pred ECCEEEEEcCHHHHHh
Confidence 9999999999988754
No 498
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.59 Aligned_cols=209 Identities=21% Similarity=0.278 Sum_probs=167.6
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCeecCcc-----cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSS--LKKSGNITYNGYKLDEF-----HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~~~~ 239 (1427)
.++|+|+|++++|||+++|+||||||||||+++|+|+++|. ...+|+|+++|+++... ..++.++|++|++.+
T Consensus 21 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 100 (261)
T PRK14263 21 FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPNP 100 (261)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCcc
Confidence 56999999999999999999999999999999999999752 12489999999987431 235679999999876
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
+ .+|++||+.++....+.. ++ ....++++++.++|.+..+...
T Consensus 101 ~-~~tv~enl~~~~~~~~~~----------------------~~--------------~~~~~~~~l~~~~l~~~i~~~~ 143 (261)
T PRK14263 101 F-SMSIFDNVAFGLRLNRYK----------------------GD--------------LGDRVKHALQGAALWDEVKDKL 143 (261)
T ss_pred c-cccHHHHHHHHHhhcCch----------------------HH--------------HHHHHHHHHHHcCCchhhhhhh
Confidence 6 599999999875432110 00 0112566778888754322222
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
+...+.||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++. + ++|+|++.| ...++.++||+|+
T Consensus 144 -~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~-~~tii~isH-~~~~i~~~~d~v~ 219 (261)
T PRK14263 144 -KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-K-DYTIALVTH-NMQQAIRVADTTA 219 (261)
T ss_pred -hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-c-CCeEEEEeC-CHHHHHHhCCEEE
Confidence 23566899999999999999999999999999999999999999999999984 3 678888654 4567889999999
Q ss_pred EEe--------CCeEEEecChHHHH
Q 000555 400 LLS--------EGHLVYQGPRAEVL 416 (1427)
Q Consensus 400 lL~--------~G~iv~~G~~~~~~ 416 (1427)
+|+ +|++++.|+.+++.
T Consensus 220 ~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 220 FFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEecccccccCCceEEEeCCHHHHH
Confidence 996 89999999998875
No 499
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=7.6e-33 Score=305.77 Aligned_cols=189 Identities=24% Similarity=0.343 Sum_probs=155.4
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc-------cccceEEEEccCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF-------HVQRTSAYISQTDNH 239 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~~~~ 239 (1427)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFD---SGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFAL 87 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccchhhHHHHHHhCeeEEecchhh
Confidence 46999999999999999999999999999999999999875 89999999985321 134679999999988
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHhCCcccccccc
Q 000555 240 IPELTVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVLGLDLCSETVV 319 (1427)
Q Consensus 240 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~v 319 (1427)
++.+||+||+.++....+.. .. .....++++++.+||++..+.
T Consensus 88 ~~~~t~~e~~~~~~~~~~~~-----------~~------------------------~~~~~~~~~l~~~~l~~~~~~-- 130 (206)
T TIGR03608 88 IENETVEENLDLGLKYKKLS-----------KK------------------------EKREKKKEALEKVGLNLKLKQ-- 130 (206)
T ss_pred ccCCcHHHHHHHHHHhcCCC-----------HH------------------------HHHHHHHHHHHHcCchhhhcC--
Confidence 88899999999865432210 00 001235678899999754444
Q ss_pred ccccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEE
Q 000555 320 GNDMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLL 399 (1427)
Q Consensus 320 g~~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vi 399 (1427)
.++.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.++ ++|+|++.|++ . ..+.||+++
T Consensus 131 ---~~~~lS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~tii~~sh~~-~-~~~~~d~i~ 204 (206)
T TIGR03608 131 ---KIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDE-GKTIIIVTHDP-E-VAKQADRVI 204 (206)
T ss_pred ---ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhc-CCEEEEEeCCH-H-HHhhcCEEE
Confidence 44579999999999999999999999999999999999999999999998654 88999876665 3 457899998
Q ss_pred EE
Q 000555 400 LL 401 (1427)
Q Consensus 400 lL 401 (1427)
+|
T Consensus 205 ~l 206 (206)
T TIGR03608 205 EL 206 (206)
T ss_pred eC
Confidence 75
No 500
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.9e-33 Score=315.09 Aligned_cols=206 Identities=23% Similarity=0.352 Sum_probs=158.9
Q ss_pred ceeeeCeeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCeecCcc---cccceEEEEccCCCCCCCC
Q 000555 167 LTILNDVSGVVKPGRMTLLLGPPASGKSTLLLALAGKLDSSLKKSGNITYNGYKLDEF---HVQRTSAYISQTDNHIPEL 243 (1427)
Q Consensus 167 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~~~~~~~l 243 (1427)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++ .
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-G 91 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-h
Confidence 46999999999999999999999999999999999999875 99999999887532 23456999999987665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhHhhhhhHHHHhhcCCCChhHHHHHhhhhcCCCcccccHHHHHHHh--CCcccccccccc
Q 000555 244 TVRETFDFAARWQGANEGFAAYINDLNRLEKERNIRPSPEIDAFMKASSVGGKKHSVSTDYVLKVL--GLDLCSETVVGN 321 (1427)
Q Consensus 244 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~~t~vg~ 321 (1427)
||+||+.+...... ..+ . +...+ .......++.+ |++ +.. +
T Consensus 92 tv~e~l~~~~~~~~----~~~----~---------------~~~~~---------~~~~~~~~~~l~~~~~----~~~-~ 134 (238)
T cd03249 92 TIAENIRYGKPDAT----DEE----V---------------EEAAK---------KANIHDFIMSLPDGYD----TLV-G 134 (238)
T ss_pred hHHHHhhccCCCCC----HHH----H---------------HHHHH---------HcChHHHHHhhccccc----eee-c
Confidence 99999987421110 000 0 00000 00112223333 332 222 3
Q ss_pred ccCCCCChHHhHHHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEecCCchhHHhhcCcEEEE
Q 000555 322 DMIRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCLRNFVHQMDATILMALLQPPPETFDLFDDLLLL 401 (1427)
Q Consensus 322 ~~~~~LSGGqkqRvsia~aL~~~p~illLDEPtsgLD~~~~~~i~~~L~~l~~~~~~tvi~~~~q~~~~~~~~~D~vilL 401 (1427)
..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .++|+|++.|++ +++ +.||++++|
T Consensus 135 ~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g~~vi~~sh~~-~~~-~~~d~v~~l 210 (238)
T cd03249 135 ERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM--KGRTTIVIAHRL-STI-RNADLIAVL 210 (238)
T ss_pred cCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CCCEEEEEeCCH-HHH-hhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999985 488999876654 455 489999999
Q ss_pred eCCeEEEecChHHHHH
Q 000555 402 SEGHLVYQGPRAEVLE 417 (1427)
Q Consensus 402 ~~G~iv~~G~~~~~~~ 417 (1427)
++|++++.|+.+++.+
T Consensus 211 ~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 211 QNGQVVEQGTHDELMA 226 (238)
T ss_pred ECCEEEEeCCHHHHhh
Confidence 9999999999887754
Done!